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Mokhtarzadeh A, Eivazzadeh-Keihan R, Pashazadeh P, Hejazi M, Gharaatifar N, Hasanzadeh M, Baradaran B, de la Guardia M. Nanomaterial-based biosensors for detection of pathogenic virus. Trends Analyt Chem 2017; 97:445-457. [PMID: 32287543 PMCID: PMC7126209 DOI: 10.1016/j.trac.2017.10.005] [Citation(s) in RCA: 151] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Viruses are real menace to human safety that cause devastating viral disease. The high prevalence of these diseases is due to improper detecting tools. Therefore, there is a remarkable demand to identify viruses in a fast, selective and accurate way. Several biosensors have been designed and commercialized for detection of pathogenic viruses. However, they present many challenges. Nanotechnology overcomes these challenges and performs direct detection of molecular targets in real time. In this overview, studies concerning nanotechnology-based biosensors for pathogenic virus detection have been summarized, paying special attention to biosensors based on graphene oxide, silica, carbon nanotubes, gold, silver, zinc oxide and magnetic nanoparticles, which could pave the way to detect viral diseases and provide healthy life for infected patients.
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Sargazi S, Fatima I, Hassan Kiani M, Mohammadzadeh V, Arshad R, Bilal M, Rahdar A, Díez-Pascual AM, Behzadmehr R. Fluorescent-based nanosensors for selective detection of a wide range of biological macromolecules: A comprehensive review. Int J Biol Macromol 2022; 206:115-147. [PMID: 35231532 DOI: 10.1016/j.ijbiomac.2022.02.137] [Citation(s) in RCA: 93] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 02/01/2022] [Accepted: 02/23/2022] [Indexed: 12/11/2022]
Abstract
Thanks to their unique attributes, such as good sensitivity, selectivity, high surface-to-volume ratio, and versatile optical and electronic properties, fluorescent-based bioprobes have been used to create highly sensitive nanobiosensors to detect various biological and chemical agents. These sensors are superior to other analytical instrumentation techniques like gas chromatography, high-performance liquid chromatography, and capillary electrophoresis for being biodegradable, eco-friendly, and more economical, operational, and cost-effective. Moreover, several reports have also highlighted their application in the early detection of biomarkers associated with drug-induced organ damage such as liver, kidney, or lungs. In the present work, we comprehensively overviewed the electrochemical sensors that employ nanomaterials (nanoparticles/colloids or quantum dots, carbon dots, or nanoscaled metal-organic frameworks, etc.) to detect a variety of biological macromolecules based on fluorescent emission spectra. In addition, the most important mechanisms and methods to sense amino acids, protein, peptides, enzymes, carbohydrates, neurotransmitters, nucleic acids, vitamins, ions, metals, and electrolytes, blood gases, drugs (i.e., anti-inflammatory agents and antibiotics), toxins, alkaloids, antioxidants, cancer biomarkers, urinary metabolites (i.e., urea, uric acid, and creatinine), and pathogenic microorganisms were outlined and compared in terms of their selectivity and sensitivity. Altogether, the small dimensions and capability of these nanosensors for sensitive, label-free, real-time sensing of chemical, biological, and pharmaceutical agents could be used in array-based screening and in-vitro or in-vivo diagnostics. Although fluorescent nanoprobes are widely applied in determining biological macromolecules, unfortunately, they present many challenges and limitations. Efforts must be made to minimize such limitations in utilizing such nanobiosensors with an emphasis on their commercial developments. We believe that the current review can foster the wider incorporation of nanomedicine and will be of particular interest to researchers working on fluorescence technology, material chemistry, coordination polymers, and related research areas.
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Review |
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Hunt HC, Wilkinson JS. Optofluidic integration for microanalysis. MICROFLUIDICS AND NANOFLUIDICS 2007; 4:53-79. [PMID: 32214954 PMCID: PMC7087941 DOI: 10.1007/s10404-007-0223-y] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2007] [Accepted: 07/25/2007] [Indexed: 05/09/2023]
Abstract
This review describes recent research in the application of optical techniques to microfluidic systems for chemical and biochemical analysis. The "lab-on-a-chip" presents great benefits in terms of reagent and sample consumption, speed, precision, and automation of analysis, and thus cost and ease of use, resulting in rapidly escalating adoption of microfluidic approaches. The use of light for detection of particles and chemical species within these systems is widespread because of the sensitivity and specificity which can be achieved, and optical trapping, manipulation and sorting of particles show significant benefits in terms of discrimination and reconfigurability. Nonetheless, the full integration of optical functions within microfluidic chips is in its infancy, and this review aims to highlight approaches, which may contribute to further miniaturisation and integration.
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Shi J, Guo J, Bai G, Chan C, Liu X, Ye W, Hao J, Chen S, Yang M. A graphene oxide based fluorescence resonance energy transfer (FRET) biosensor for ultrasensitive detection of botulinum neurotoxin A (BoNT/A) enzymatic activity. Biosens Bioelectron 2014; 65:238-44. [PMID: 25461164 DOI: 10.1016/j.bios.2014.10.050] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2014] [Revised: 10/17/2014] [Accepted: 10/20/2014] [Indexed: 11/18/2022]
Abstract
Botulinum neurotoxins (BoNTs) are among the most potent toxic bacterial proteins for humans, which make them potential agents for bioterrorism. Therefore, an ultrasensitive detection of BoNTs and their active states is in great need as field-deployable systems for anti-terrorism applications. We report the construction of a novel graphene oxide (GO)-peptide based fluorescence resonance energy transfer (FRET) biosensor for ultrasensitive detection of the BoNT serotype A light chain (BoNT-LcA) protease activity. A green fluorescence protein (GFP) modified SNAP-25 peptide substrate (SNAP-25-GFP) was optimally designed and synthesized with the centralized recognition/cleavage sites. This FRET platform was constructed by covalent immobilization of peptide substrate on GO with BSA passivation which have advantages of low non-specific adsorption and high stability in protein abundant solution. BoNT-LcA can specifically cleave SNAP-25-GFP substrate covalently immobilized on GO to release the fragment with GFP. Based on fluorescence signal recovery measurement, the target BoNT-LcA was detected sensitively and selectively with the linear detection range from 1fg/mL to 1pg/mL. The limit of detection (LOD) for BoNT-LcA is around 1fg/mL.
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Siangproh W, Somboonsuk T, Chailapakul O, Songsrirote K. Novel colorimetric assay for paraquat detection on-silica bead using negatively charged silver nanoparticles. Talanta 2017; 174:448-453. [PMID: 28738607 DOI: 10.1016/j.talanta.2017.06.045] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Revised: 06/16/2017] [Accepted: 06/16/2017] [Indexed: 11/18/2022]
Abstract
A simple, rapid, sensitive, and economical method based on colorimetry for the determination of paraquat, a widely used herbicide, was developed. Citrate-coated silver nanoparticles (AgNPs) were synthesized as the colorimetric probe. The mechanism of the assay is related to the aggregation of negatively charged AgNPs as induced by positively-charged paraquat resulting from coulombic attraction which causes the color to change from a deep greenish yellow to pale yellow in accordance with the concentrations of paraquat. Silica gel was exploited as the paraquat adsorbent for purification and pre-concentration prior to the direct determination with negatively charged AgNPs without the requirement of the elution step. The validity of the proposed approach was evaluated by spiking standard paraquat in water and plant samples. Recoveries of paraquat in water samples were 93.6% and 95.4% for groundwater and canal water, respectively, while those in plant samples were 89.5% and 86.6% for Chinese cabbage and green apple, respectively,after using the optimized extraction procedure. The absorbance of AgNPs at 400nm was linearly related to the concentration of paraquat over the range of 0.05-50mgL-1, with detection limits of 0.05mgL-1 for water samples, and 0.10mgL-1 for plant samples by naked eye determination.
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Siangproh W, Chailapakul O, Songsrirote K. Simple and fast colorimetric detection of inorganic arsenic selectively adsorbed onto ferrihydrite-coated silica gel using silver nanoplates. Talanta 2016; 153:197-202. [PMID: 27130109 DOI: 10.1016/j.talanta.2016.03.028] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2015] [Revised: 03/04/2016] [Accepted: 03/06/2016] [Indexed: 11/20/2022]
Abstract
The optical detection for inorganic arsenic (As) semi-quantitative determination is presented by using silver nanoplates (AgNPls). The color of AgNPs is immediately changed in the presence of As(III) and As(V) with the same sensitivity. To improve the selectivity of AgNPls for As detection, ferrihydrite-coated silica gel (SiO2-Fh) was specifically exploited as adsorbent for arsenic prior to As detection by AgNPls. The developed method provides the detection limit of 0.5ppm with the detection range between 0.5ppm and 30.0ppm for As determination observed with naked eye, and allows to determine total inorganic arsenic. This is the first report of As detection approach combining As removal technology together with nanotechnology. This combined technique provides a rapid, sensitive and selective method for monitoring As levels in aqueous samples, and can be employed as a testing field kit to screen arsenic contamination outside of a laboratory.
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Research Support, Non-U.S. Gov't |
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Dai J, Vu D, Nagel S, Lin CH, Fidalgo de Cortalezzi M. Colloidal crystal templated molecular imprinted polymer for the detection of 2-butoxyethanol in water contaminated by hydraulic fracturing. Mikrochim Acta 2017; 185:32. [PMID: 29594420 DOI: 10.1007/s00604-017-2590-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Accepted: 11/27/2017] [Indexed: 11/29/2022]
Abstract
The authors describe a molecularly imprinted polymer (MIP) that enables detection of 2-butoxyethanol (2BE), a pollutant associated with hydraulic fracturing contamination. Detection is based on a combination of a colloidal crystal templating and a molecular imprinting. The MIPs are shown to display higher binding capacity for 2BE compared to non-imprinted films (NIPs), with imprinting efficiencies of ∼ 2. The tests rely on the optical effects that are displayed by the uniformly ordered porous structure of the material. The reflectance spectra of the polymer films have characteristic Bragg peaks whose location varies with the concentration of 2BE. Peaks undergo longwave red shifts up to 50 nm on exposure of the MIP to 2BE in concentrations in the range from 1 ppb to 100 ppm. This allows for quantitative estimates of the 2BE concentrations present in aqueous solutions. The material is intended for use in the early detection of contamination at hydraulic fracturing sites. Graphical abstract Molecularly imprinted polymers (MIPs) sensor with the sensing ability on reflectance spectra responding to the presence of 2-butoxyethanol (2BE) for early detection of hydraulic fracking contamination.
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Research Support, U.S. Gov't, Non-P.H.S. |
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Geißler D, Nirmalananthan-Budau N, Scholtz L, Tavernaro I, Resch-Genger U. Analyzing the surface of functional nanomaterials-how to quantify the total and derivatizable number of functional groups and ligands. Mikrochim Acta 2021; 188:321. [PMID: 34482449 PMCID: PMC8418596 DOI: 10.1007/s00604-021-04960-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Accepted: 08/08/2021] [Indexed: 12/04/2022]
Abstract
Functional nanomaterials (NM) of different size, shape, chemical composition, and surface chemistry are of increasing relevance for many key technologies of the twenty-first century. This includes polymer and silica or silica-coated nanoparticles (NP) with covalently bound surface groups, semiconductor quantum dots (QD), metal and metal oxide NP, and lanthanide-based NP with coordinatively or electrostatically bound ligands, as well as surface-coated nanostructures like micellar encapsulated NP. The surface chemistry can significantly affect the physicochemical properties of NM, their charge, their processability and performance, as well as their impact on human health and the environment. Thus, analytical methods for the characterization of NM surface chemistry regarding chemical identification, quantification, and accessibility of functional groups (FG) and surface ligands bearing such FG are of increasing importance for quality control of NM synthesis up to nanosafety. Here, we provide an overview of analytical methods for FG analysis and quantification with special emphasis on bioanalytically relevant FG broadly utilized for the covalent attachment of biomolecules like proteins, peptides, and oligonucleotides and address method- and material-related challenges and limitations. Analytical techniques reviewed include electrochemical titration methods, optical assays, nuclear magnetic resonance and vibrational spectroscopy, as well as X-ray based and thermal analysis methods, covering the last 5-10 years. Criteria for method classification and evaluation include the need for a signal-generating label, provision of either the total or derivatizable number of FG, need for expensive instrumentation, and suitability for process and production control during NM synthesis and functionalization.
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Review |
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Feng J, Duan LX, Shang ZB, Chao JB, Wang Y, Jin WJ. Colorimetric and fluorometric dual sensing of trace water in methanol based on a Schiff Base-Al 3+ ensemble probe. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 201:185-192. [PMID: 29751352 DOI: 10.1016/j.saa.2018.05.016] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2017] [Revised: 03/16/2018] [Accepted: 05/03/2018] [Indexed: 06/08/2023]
Abstract
A new julolidine based Schiff base receptor (L) was synthesized and characterized. L forms a 1:1 complex with Al3+ in methanol, resulting in an immediate color change from chartreuse to orange and a remarkable enhancement in its emission intensity along with a bathochromic shift from 540 nm to 570 nm. Addition of trace amounts of water significantly quenches the fluorescence emission, where a decomplexation of Al3+ from the L-Al3+ complex takes place. The significant quenching effect indicated that the L-Al3+ ensemble system can be used to detect trace water in commercial methanol. From the fluorescence titration, the detection limit for sensing water in methanol was estimated to be 0.0047%. We have also made an easy-to-prepare test strip of L-Al3+ to detect water in methanol through naked-eye observation, which is possible to realize in situ monitoring.
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Rapid Detection Device for Salmonella typhi in Milk, Juice, Water and Calf Serum. Indian J Microbiol 2018; 58:381-392. [PMID: 30013283 DOI: 10.1007/s12088-018-0730-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Accepted: 04/20/2018] [Indexed: 10/17/2022] Open
Abstract
A limit of detection of 200 CFU/mL of Salmonella typhi spiked in various sample matrices were achieved in 30 min. The sample matrices were raw/unprocessed milk, commercially available milk, juice from packed bottles, fresh juice from carts, potable water, turbid water and calf serum. The complete protocol comprised of three steps: (a) cell lysis (b) nucleic acid amplification and (c) an in situ optical detection. The cell lysis was carried out using a simple heating based protocol, while the loop-mediated isothermal amplification of DNA was carried out by an in-house designed and fabricated system. The developed system consists of an aluminum block fitted with two cartridge heaters along with a thermocouple. The system was coupled to a light source and spectrometer for a simultaneous in situ detection. Primers specific for STY2879 gene were used to amplify the nucleic acid sequence, isolated from S. typhi cells. The protocol involves 15 min of cell lysis and DNA isolation followed by 15 min for isothermal amplification and simultaneous detection. No cross-reactivity of the primers were observed at 106 CFU/mL of Escherichia coli, Vibrio cholerae, Salmonella typhimurium, Salmonella paratyphi A, Pseudomonas aeruginosa, Bacillus cereus, Lysteria monocytogenes, Clostridium botulinum, Staphylococcus aureus and Salmonella havana. In addition, the system was able to detect S. typhi of 200 CFU/mL in a concoction of 106 CFU/mL of E. coli, 106 CFU/mL of V. cholerae, and 106 CFU/mL of hepatocyte-derived cellular carcinoma HUH7 cells. The proposed rapid diagnostic system shows a promising future in the field of food and medical diagnostics.
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Ferrier DC, Kiely J, Luxton R. Propofol detection for monitoring of intravenous anaesthesia: a review. J Clin Monit Comput 2021; 36:315-323. [PMID: 34213720 PMCID: PMC9123036 DOI: 10.1007/s10877-021-00738-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Accepted: 06/28/2021] [Indexed: 11/03/2022]
Abstract
This paper presents a review of established and emerging methods for detecting and quantifying the intravenous anaesthetic propofol in solution. There is growing evidence of numerous advantages of total intravenous anaesthesia using propofol compared to conventional volatile-based anaesthesia, both in terms of patient outcomes and environmental impact. However, volatile-based anaesthesia still accounts for the vast majority of administered general anaesthetics, largely due to a lack of techniques for real-time monitoring of patient blood propofol concentration. Herein, propofol detection techniques that have been developed to date are reviewed alongside a discussion of remaining challenges.
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Review |
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Boretti A, Castelletto S. Nanometric resolution magnetic resonance imaging methods for mapping functional activity in neuronal networks. MethodsX 2016; 3:297-306. [PMID: 27144128 PMCID: PMC4840428 DOI: 10.1016/j.mex.2016.04.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2015] [Accepted: 04/11/2016] [Indexed: 11/17/2022] Open
Abstract
This contribution highlights and compares some recent achievements in the use of k-space and real space imaging (scanning probe and wide-filed microscope techniques), when applied to a luminescent color center in diamond, known as nitrogen vacancy (NV) center. These techniques combined with the optically detected magnetic resonance of NV, provide a unique platform to achieve nanometric magnetic resonance imaging (MRI) resolution of nearby nuclear spins (known as nanoMRI), and nanometric NV real space localization. •Atomic size optically detectable spin probe.•High magnetic field sensitivity and nanometric resolution.•Non-invasive mapping of functional activity in neuronal networks.
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Applications of hybridization chain reaction optical detection incorporating nanomaterials: A review. Anal Chim Acta 2022; 1190:338930. [PMID: 34857127 DOI: 10.1016/j.aca.2021.338930] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 08/05/2021] [Accepted: 08/06/2021] [Indexed: 12/13/2022]
Abstract
The development of powerful, simple and cost-effective signal amplifiers has significant implications for biological research and analysis. Hybridization chain reaction (HCR) has attracted increasing attention because of its enzyme-free, simple, and efficient amplification. In the HCR process, an initiator probe triggered a pair of metastable hairpins through a cross-opening process to propagate a chain reaction of hybridization events, yielding a long-nicked double-stranded nucleic acid structure. To achieve more noticeable signal amplification, nanomaterials, including graphene oxide, quantum dots, gold, silver, magnetic, and other nanoparticles, were integrated with HCR. Various types of colorimetric, fluorescence, plasmonic analyses or chemiluminescence optical sensing strategies incorporating nanomaterials have been developed to analyze various targets, such as nucleic acids, small biomolecules, proteins, and metal ions. This review summarized the recent advances of HCR technology pairing diverse nanomaterials in optical detection and discussed their challenges.
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Review |
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Bagheri AR, Aramesh N, Chen J, Liu W, Shen W, Tang S, Lee HK. Polyoxometalate-based materials in extraction, and electrochemical and optical detection methods: A review. Anal Chim Acta 2022; 1209:339509. [PMID: 35569843 DOI: 10.1016/j.aca.2022.339509] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 01/12/2022] [Accepted: 01/14/2022] [Indexed: 02/07/2023]
Abstract
Polyoxometalates (POMs) as metal-oxide anions have exceptional properties like high negative charges, remarkable redox abilities, unique ligand properties and availability of organic grafting. Moreover, the amenability of POMs to modification with different materials makes them suitable as precursors to further obtain new composites. Due to their unique attributes, POMs and their composites have been utilized as adsorbents, electrodes and catalysts in extraction, and electrochemical and optical detection methods, respectively. A survey of the recent progress and developments of POM-based materials in these methods is therefore desirable, and should be of great interest. In this review article, POM-based materials, their properties as well as their identification methods, and analytical applications as adsorbents, electrodes and catalysts, and corresponding mechanisms of action, where relevant, are reviewed. Some current issues of the utilization of these materials and their future prospects in analytical chemistry are discussed.
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Review |
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SERS-fluorescence dual-mode nanoprobe for the detection and imaging of Bax mRNA during apoptosis. Mikrochim Acta 2023; 190:130. [PMID: 36905455 DOI: 10.1007/s00604-023-05709-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 02/19/2023] [Indexed: 03/12/2023]
Abstract
A dual-mode nanoprobe was constructed to detect Bax messenger RNA (mRNA), consisting of gold nanotriangles (AuNTs), a Cy5-modified recognition sequence, and a thiol-modified DNA sequence. Bax mRNA is one of the key pro-apoptotic factors in the apoptosis pathway. Raman enhancement and fluorescence quenching of the signal group Cy5 were performed using AuNTs as substrates. The thiol-modified nucleic acid chain is partially complementary to the Cy5-modified nucleic acid chain to form a double strand and is linked to the AuNTs by the Au-S bond. When Bax mRNA is present, the Cy5-modified strand specifically binds to it to form a more stable duplex, making Cy5 far away from AuNTs, and SERS signal is weakened while fluorescence signal is enhanced. The nanoprobe can be used for the quantitative detection of Bax mRNA in vitro. Combined with the high sensitivity of SERS and the visualization of fluorescence, this method has good specificity and can be used for in situ imaging and dynamic monitoring of Bax mRNA during deoxynivalenol (DON) toxin-induced apoptosis of HepG2 cells. DON plays a pathogenic role mainly by inducing cell apoptosis. The results confirmed that the proposed dual-mode nanoprobe has good versatility in various human cell lines.
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Calvo-López A, Ymbern O, Puyol M, Alonso-Chamarro J. Soluble reactive phosphorous determination in wastewater treatment plants by automatic microanalyzers. Talanta 2021; 221:121508. [PMID: 33076102 DOI: 10.1016/j.talanta.2020.121508] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 07/31/2020] [Accepted: 08/03/2020] [Indexed: 02/07/2023]
Abstract
The analysis of soluble reactive phosphate (SRP) in water is key to control water quality. In order to continuous monitor orthophosphate content in water during treatment processes and in the effluents of wastewater treatment plants, conventional procedures, usually performed in a laboratory, must be adapted. This means pursuing efforts on miniaturizing systems to operate in situ and automating analytical methods to work on-line. The design, construction and evaluation of an automatic and low cost cyclic olefin copolymer (COC)-based spectrophotometric microanalyzer, capable of operating in unattended conditions, is presented to monitor soluble reactive phosphorous, as orthophosphate ion, in wastewater samples coming from sewage treatment plants. The microsystem, constructed by CNC micromilling and using a multilayer approach, integrates microfluidics to carry out the phosphomolybdenum blue (PMB) reaction and an optical flow-cell for the spectrophotometric orthophosphate determination in a single polymeric substrate smaller than a credit card. It is connected to a compact optical detection system composed by a LED emitting at 660 nm and a PIN-photodiode, both integrated in a PCB. Flow management is automatically performed by programmed microvalves and micropumps, which control autocalibration processes and allow unattended operation. Analytical features after the optimization of the microfluidic platform and the chemical and the hydrodynamic variables, were a linear range from 0.09 to 32 mg L-1 P and a detection limit of 0.03 mg L-1 P with a sampling rate of 24 samples h-1, demonstrating the microanalyzer suitability for SRP monitoring in water. Moreover, real samples were analyzed obtaining promising results.
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Abstract
There is a huge potential interest to use synthetic polymers as versatile solid supports for analytical microarraying. Chemical modification of polycarbonate (PC) for covalent immobilization of probes, micro-printing of protein or nucleic acid probes, development of indirect immunoassay, and development of hybridization protocols are described and discussed.
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Lee ES, de Josselin de Jong E, Kim E, Kim BI. Real-time optical detection of endodontic infection using bacterial autofluorescence. J Dent 2023; 136:104600. [PMID: 37392816 DOI: 10.1016/j.jdent.2023.104600] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Revised: 06/21/2023] [Accepted: 06/23/2023] [Indexed: 07/03/2023] Open
Abstract
OBJECTIVES For successful root canal treatment (RCT), it is essential to objectively assess the presence and activity of bacteria in the root canal system. However, current methods rely on subjective observations of root canal exudates. This study aimed to confirm whether real-time optical detection using bacterial autofluorescence can evaluate endodontic infection status by assessing the red fluorescence (RF) detected from root canal exudates. METHODS During RCT, endodontic paper points were used to collect root canal exudates scored using conventional organoleptic tests to assess the severity of root canal infections. RF on the paper points was assessed using quantitative light-induced fluorescence (QLF) technology. RF intensity and area from the paper points were quantified, and their correlations with infection severity were assessed using their organoleptic scores. The oral microbiome composition of RF samples was compared with non-red fluorescent (non-RF) samples. RESULTS The RF detection rate was nil and >98% in the non-infectious and severe groups. The RF intensity and area significantly increased with infection severity (p<0.001) and showed strong correlations with organoleptic scores (r=0.72, 0.82, respectively). The diagnostic accuracy for detecting root canal infection using RF intensity was good to excellent (AUC = 0.81-0.95) and increased with infection severity. The microbial diversity of the RF samples was significantly lower than that of the non-RF samples. Gram-negative anaerobic bacteria such as Prevotella and Porphyromonas were more predominant in RF samples. CONCLUSIONS Optical detection using bacterial autofluorescence can objectively evaluate endodontic infection status in real-time by assessing the RF of endodontic root canal exudates. CLINICAL SIGNIFICANCE This real-time optical technology can be utilised to detect endodontic bacterial infection without conventional incubation, allowing clinicians to determine the endpoint of chemomechanical debridement and increase the positive outcomes of RCTs.
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Anwar S, Khawar MB, Ovais M, Afzal A, Zhang X. Gold nanocubes based optical detection of HIV-1 DNA via surface enhanced Raman spectroscopy. J Pharm Biomed Anal 2023; 226:115242. [PMID: 36638548 DOI: 10.1016/j.jpba.2023.115242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 12/16/2022] [Accepted: 01/09/2023] [Indexed: 01/11/2023]
Abstract
Optical detection of HIV-1 DNA with surface enhanced Raman spectroscopy (SERS) is a quick and versatile method, having great potential in screening and characterization of HIV-1 virus particle. We have synthesized and applied novel gold nanocubes (AuNCs) for signal enhancement of SERS to study HIV-1 DNA strands by taking into account the specific vibrational bands of functional groups. Raman peaks at 562 cm-1, 800 cm-1, 1094 cm-1 were observed in both Human Random Control DNA and HIV-1 DNA, while three new peaks were detected in infected DNA at 421 cm-1, 1069 cm-1 and 1254 cm-1. Raman bands in case of AuNCs coated HIV-1 DNA molecules were observed with enhanced intensity values as compared to the silver nanoparticles-based SERS substrate. In case of silver nanoparticles (AgNPs) conjugate DNA, we get all signatures of HIV-1 virus at almost the same position with peak distortions, peak alterations and intensities reductions. We overall molecularly observed HIV-1 infected DNA and Human Random Control DNA, with high sensitivity and selectivity using highly sensitive and stable AuNCs in SERS. This technique can be utilized to identify molecular structures and chemical identification of biomacromolecules which can further be investigated as biomarkers for the screening of whole-body HIV-1 virus particles.
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Mandon J, Mur LAJ, Harren FJM, Cristescu SM. Laser-Based Methods for Detection of Nitric Oxide in Plants. Methods Mol Biol 2016; 1424:113-126. [PMID: 27094415 DOI: 10.1007/978-1-4939-3600-7_10] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Nitric oxide (NO) plays an important role in plant signaling and in response to various stress conditions. Therefore, real-time measurements of NO production provide better insights into understanding plant processes and can help developing strategies to improve food production and postharvest quality. Using laser-based spectroscopic methods, sensitive, online, in planta measurements of plant-pathogen interactions are possible. This chapter introduces the basic principle of the optical detectors using different laser sources for accurate monitoring of fast dynamic changes of NO production. Several applications are also presented to demonstrate the suitability of these detectors for detection of NO in plants.
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Yu Z, Meng R, Deng S, Jia L. An open-source handheld spectrometer for colorimetric and fluorescence analyses. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 287:122072. [PMID: 36375287 DOI: 10.1016/j.saa.2022.122072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2022] [Revised: 10/28/2022] [Accepted: 10/31/2022] [Indexed: 06/16/2023]
Abstract
Spectrometers are essential analytical devices for analyzing fluid samples in biological, environmental, and disease diagnostic applications. However, the relatively high cost, the lack of portability, and the requirement for a constant power supply of bulky laboratory instruments limit their on-site applications. Herein, a wireless, cost-effective, open-source, and handheld spectrometer was designed and fabricated to realize the colorimetric and fluorescence analyses. It was built from off-the-shelf electronics utilizing 3D printing technology. The assembled device costs as little as $50. It has an overall dimension of 5 × 5 × 8 cm and an overall weight of only 130 g, which can easily fit in the palm of an adult's hand. It can detect light waves in the 405-690 nm range and transmit the read data to the corresponding SpecAnalysis Android application via Bluetooth. The feasibility of the device was demonstrated by the optical detection of Cu(II), bovine serum albumin, and calf thymus DNA. The sensitivity and detection limits of this device were comparable to those of commercial research-grade spectrophotometers and fluorescence spectrometers. The results suggest that the handheld spectrometer can be applied to detect a variety of substances, not limited to quantitative analysis of a specific individual compound.
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Rosa CE, Jorge FN, Luis GM, Juana CE, Edgar PD. 3D printed opto-microfluidic autonomous analyzer for photometric applications. HARDWAREX 2023; 14:e00406. [PMID: 36910021 PMCID: PMC9999204 DOI: 10.1016/j.ohx.2023.e00406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 02/08/2023] [Accepted: 02/17/2023] [Indexed: 06/18/2023]
Abstract
3D printed opto-microfluidic autonomous analyzer for photometric applications performs the automation of analytical micro-processes. The proposed device was designed under restrictions of small size and low energy consumption, which allow its portability for in-situ, on line and real time analysis. The autonomous process and auto-calibration consists of four functions: control and data acquisition; hydrodynamic: fluid pumping and flow injection; optical detection and wireless communication. All electronics systems where controlled with a virtual instrument interface. In the experiments carried out to measure fluorides, the results obtained were very close to those obtained with laboratory equipment. The consumption of reagents was 50% less and waste was reduced by 80%. The cost of the portable and autonomous microanalyzer is 75% less than large and robust laboratory equipment.
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Ruangchaithaweesuk S, Chintamsetti V, Yao L, Tsai TW, Xu S. High-resolution optically-detected magnetic resonance imaging in an ambient magnetic field. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2013; 233:1-6. [PMID: 23708206 DOI: 10.1016/j.jmr.2013.05.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2013] [Revised: 04/23/2013] [Accepted: 05/02/2013] [Indexed: 06/02/2023]
Abstract
Magnetic resonance imaging (MRI) in an ultralow magnetic field usually has poor spatial resolution compared to its high-field counterpart. The concomitant field effect and low signal level are among the major causes that limit the spatial resolution. Here, we report a novel imaging method, a zoom-in scheme, to achieve a reasonably high spatial resolution of 0.6 mm x 0.6mm without suffering the concomitant field effect. This method involves multiple steps of spatial encoding with gradually increased spatial resolution but reduced field-of-view. This method takes advantage of the mobility of ultralow-field MRI and the large physical size of the ambient magnetic field. We also demonstrate the use of a unique gradient solenoid to improve the efficiency of optical detection with an atomic magnetometer. The enhanced filling factor improved the signal level and consequently facilitated an improved spatial resolution.
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Kimura H, Asano R. Strategies to simplify operation procedures for applying labeled antibody-based immunosensors to point-of-care testing. Anal Biochem 2022; 654:114806. [PMID: 35835209 DOI: 10.1016/j.ab.2022.114806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 06/12/2022] [Accepted: 07/07/2022] [Indexed: 11/01/2022]
Abstract
Point-of-care testing (POCT) is an ideal testing format for the rapid and on-site detection of analytes in patients, and facilitates disease diagnosis and monitoring. Molecular recognition elements are required for the specific detection of analytes, and biosensors that use antibodies as the molecular recognition elements are called immunosensors. Traditional immunosensors such as sandwich enzyme-linked immunosorbent assay (ELISA) require complicated procedures to form immunocomplexes consisting of detection antibodies, analytes, and capture antibodies. They also require long incubation times, washing procedures, and large and expensive specialized equipment that must be operated by laboratory technicians. Immunosensors for POCT should be systems that use relatively small pieces of equipment and do not require special training. In this review, to help in the construction of immunosensors for POCT, we have summarized the recently reported strategies for simplifying the operation, incubation, and washing procedures. We focused on the optical and electrochemical detection principles of immunosensors, compared the strategies for operation, sensitivity, and detection devices and discussed the ideal system. Combining detection devices that can be fabricated inexpensively and strategies that enable simplification of operation procedures and enhance sensitivities will contribute to the development of immunosensors for POCT.
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Dias Neves MA, Mendes Pinto I. AptaShield: A Universal Signal-Transduction System for Fast and High-Throughput Optical Molecular Biosensing. ACS Sens 2024; 9:1756-1762. [PMID: 38620013 PMCID: PMC11059090 DOI: 10.1021/acssensors.3c02762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 03/11/2024] [Accepted: 03/22/2024] [Indexed: 04/17/2024]
Abstract
Biosensing technologies are often described to provide facile, sensitive, and minimally to noninvasive detection of molecular analytes across diverse scientific, environmental, and clinical diagnostic disciplines. However, commercialization has been very limited mostly due to the difficulty of biosensor reconfiguration for different analyte(s) and limited high-throughput capabilities. The immobilization of different biomolecular probes (e.g., antibodies, peptides, and aptamers) requires the sensor surface chemistry to be tailored to provide optimal probe coupling, orientation, and passivation and prevent nonspecific interactions. To overcome these challenges, here we report the development of a solution-phase biosensor consisting of an engineered aptamer, the AptaShield, capable of universally binding to any antigen recognition site (Fab') of fluorescently labeled immunoglobulins (IgG) produced in rabbits. The resulting AptaShield biosensor relies on a low affinity dynamic equilibrium between the fluorescently tagged aptamer and IgG to generate a specific Förster resonance energy transfer (FRET) signal. As the analyte binds to the IgG, the AptaShield DNA aptamer-IgG complex dissociates, leading to an analyte concentration-dependent decrease of the FRET signal. The biosensor demonstrates high selectivity, specificity, and reproducibility for analyte quantification in different biological fluids (e.g., urine and blood serum) in a one-step and low sample volume (0.5-6.25 μL) format. The AptaShield provides a universal signal transduction mechanism as it can be coupled to different rabbit antibodies without the need for aptamer modification, therefore representing a robust high-throughput solution-phase technology suitable for point-of-care applications, overcoming the current limitations of gold standard enzyme-linked immunosorbent assays (ELISA) for molecular profiling.
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