Skin transcriptomic analysis reveals candidate genes and pathways associated with thermotolerance in hair sheep

The skin plays an important role in thermoregulation. Identification of genes on the skin that contribute to increased heat tolerance can be used to select animals with the best performance in warm environments. Our objective was to identify candidate genes associated with the heat stress response in the skin of Santa Ines sheep. A group of 80 sheep assessed for thermotolerance was kept in a climatic chamber for 8 days at a stress level temperature of 36 °C (10 am to 04 pm) and a maintenance temperature of 28 °C (04 pm to 10 am). Two divergent groups, with seven animals each, were formed after ranking them by thermotolerance using rectal temperature. From skin biopsy samples, total RNA was extracted, quantified, and used for RNA-seq analysis. 15,989 genes were expressed in sheep skin samples, of which 4 genes were differentially expressed (DE; FDR < 0.05) and 11 DE (FDR 0.05-0.177) between the two divergent groups. These genes are involved in cellular protection against stress (HSPA1A and HSPA6), ribosome assembly (28S, 18S, and 5S ribosomal RNA), and immune response (IGHG4, GNLY, CXCL1, CAPN14, and SAA-4). The candidate genes and main pathways related to heat tolerance in Santa Ines sheep require further investigation to understand their response to heat stress in different climatic conditions and under solar radiation. It is essential to verify whether these genes and pathways are present in different breeds and to understand the relationship between heat stress and other genes identified in this study.

Predicting the chemical composition of the body and the carcass of hair sheep using body parts and carcass measurements

Determination of the chemical composition in the body and carcass of ruminants is important for both nutritional requirement studies and the meat industry. This study aimed to develop equations to predict the body and carcass chemical composition of hair sheep using the chemical composition of body parts, carcass measurements and shrunk BW as predictors. A database containing 107 individual records for castrated male hair sheep ranging from 24 to 43 kg BW was gathered from two body composition studies. The empty body, carcass and body parts were analyzed for water, ash, fat and protein contents (%). The body parts used to estimate body and carcass composition were fore leg, hind leg and 9-11th rib section. The carcass measurements used were leg length, thoracic circumference, hind circumference, hind width, thoracic width, thoracic depth and chest width. Each model performance was evaluated using a leave-one-out cross-validation. Multiple regression analysis considering the study as a random effect revealed that body parts in association with carcass measurements were significant for predicting the chemical composition in the body of castrate male sheep. However, the use of the chemical composition of hind leg produced the best models for predicting the ash and fat contents in the empty body, whereas the water and protein contents in the empty body were better predicted when using the chemical compositions of 9-11th rib section and fore leg, respectively. Multiple regression analysis also revealed that most body parts were suitable for predicting the carcass composition, except for 9-11th rib section whose chemical composition did not produce significant prediction equations for ash and protein carcass contents. The use of the chemical composition of hind leg in association with carcass measurements produced the best models for predicting the water and fat contents in the carcass, while the ash and protein contents in the carcass were better predicted when using the chemical composition of fore leg. In conclusion, precision, accuracy and goodness-of-fit of the equations drove the selection of the chemical composition of hind leg and carcass measurements in a multivariate approach, as the most suitable predictors of the chemical composition of the body and carcass of hair sheep. However, the chemical composition of fore leg may be used as well. The developed equations could improve the accuracy of the empty body and carcass composition estimations in sheep, optimizing the estimation of nutrient requirements, as well as the carcass quality evaluation for this species.