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Liu P, Wilson P, Redquest B, Keobouasone S, Manseau M. Seq2Sat and SatAnalyzer toolkit: Towards comprehensive microsatellite genotyping from sequencing data. Mol Ecol Resour 2024;24:e13929. [PMID: 38289068 DOI: 10.1111/1755-0998.13929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Revised: 12/22/2023] [Accepted: 01/09/2024] [Indexed: 03/06/2024]
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Pina A, Irisarri P, Errea P, Zhebentyayeva T. Mapping Quantitative Trait Loci Associated With Graft (In)Compatibility in Apricot (Prunus armeniaca L.). FRONTIERS IN PLANT SCIENCE 2021;12:622906. [PMID: 33679836 PMCID: PMC7933020 DOI: 10.3389/fpls.2021.622906] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Accepted: 01/08/2021] [Indexed: 05/29/2023]
3
Giovambattista G, Takeshima SN, Moe KK, Pereira Rico JA, Polat M, Loza Vega A, Arce Cabrera ON, Aida Y. BoLA-DRB3 genetic diversity in Highland Creole cattle from Bolivia. HLA 2020;96:688-696. [PMID: 33094557 DOI: 10.1111/tan.14120] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Revised: 10/14/2020] [Accepted: 10/16/2020] [Indexed: 01/24/2023]
4
Jia J, Lin K, Sun H, Dai JJ, Yang ZQ. Identification of two novel KIR3DL1 subtypes, KIR3DL1*0010104 and KIR3DL1*0010105. HLA 2018;93:138-139. [PMID: 30582293 DOI: 10.1111/tan.13457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 12/12/2018] [Accepted: 12/21/2018] [Indexed: 11/29/2022]
5
Schmidt DJ, Fallon S, Roberts DT, Espinoza T, McDougall A, Brooks SG, Kind PK, Bond NR, Kennard MJ, Hughes JM. Monitoring age-related trends in genomic diversity of Australian lungfish. Mol Ecol 2018;27:3231-3241. [PMID: 29989297 DOI: 10.1111/mec.14791] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2018] [Revised: 06/28/2018] [Accepted: 07/01/2018] [Indexed: 11/28/2022]
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Malmberg MM, Shi F, Spangenberg GC, Daetwyler HD, Cogan NOI. Diversity and Genome Analysis of Australian and Global Oilseed Brassica napus L. Germplasm Using Transcriptomics and Whole Genome Re-sequencing. FRONTIERS IN PLANT SCIENCE 2018;9:508. [PMID: 29725344 PMCID: PMC5917405 DOI: 10.3389/fpls.2018.00508] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2018] [Accepted: 04/03/2018] [Indexed: 05/21/2023]
7
Clevenger JP, Korani W, Ozias-Akins P, Jackson S. Haplotype-Based Genotyping in Polyploids. FRONTIERS IN PLANT SCIENCE 2018;9:564. [PMID: 29755500 PMCID: PMC5932196 DOI: 10.3389/fpls.2018.00564] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Accepted: 04/10/2018] [Indexed: 05/05/2023]
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Gazave E, Tassone EE, Ilut DC, Wingerson M, Datema E, Witsenboer HMA, Davis JB, Grant D, Dyer JM, Jenks MA, Brown J, Gore MA. Population Genomic Analysis Reveals Differential Evolutionary Histories and Patterns of Diversity across Subgenomes and Subpopulations of Brassica napus L. FRONTIERS IN PLANT SCIENCE 2016;7:525. [PMID: 27148342 PMCID: PMC4838616 DOI: 10.3389/fpls.2016.00525] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2015] [Accepted: 04/04/2016] [Indexed: 05/08/2023]
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Sequence-based mapping of the polyploid wheat genome. G3-GENES GENOMES GENETICS 2013;3:1105-14. [PMID: 23665877 PMCID: PMC3704239 DOI: 10.1534/g3.113.005819] [Citation(s) in RCA: 111] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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