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Bertouille J, Kasas S, Martin C, Hennecke U, Ballet S, Willaert RG. Fast Self-Assembly Dynamics of a β-Sheet Peptide Soft Material. Small 2023; 19:e2206795. [PMID: 36807731 DOI: 10.1002/smll.202206795] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 12/28/2022] [Indexed: 05/18/2023]
Abstract
Peptide-based hydrogels are promising biocompatible materials for wound healing, drug delivery, and tissue engineering applications. The physical properties of these nanostructured materials depend strongly on the morphology of the gel network. However, the self-assembly mechanism of the peptides that leads to a distinct network morphology is still a subject of ongoing debate, since complete assembly pathways have not yet been resolved. To unravel the dynamics of the hierarchical self-assembly process of the model β-sheet forming peptide KFE8 (Ac-FKFEFKFE-NH2 ), high-speed atomic force microscopy (HS-AFM) in liquid is used. It is demonstrated that a fast-growing network, based on small fibrillar aggregates, is formed at a solid-liquid interface, while in bulk solution, a distinct, more prolonged nanotube network emerges from intermediate helical ribbons. Moreover, the transformation between these morphologies has been visualized. It is expected that this new in situ and in real-time methodology will set the path for the in-depth unravelling of the dynamics of other peptide-based self-assembled soft materials, as well as gaining advanced insights into the formation of fibers involved in protein misfolding diseases.
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Affiliation(s)
- Jolien Bertouille
- Research Group of Organic Chemistry, Vrije Universiteit Brussel, Brussels, 1050, Belgium
| | - Sandor Kasas
- Laboratory of Biological Electron Microscopy, Ecole Polytechnique Fédérale de Lausanne, Lausanne, 1015, Switzerland
- International Joint Research Group VUB-EPFL BioNanotechnology & NanoMedicine, Vrije Universiteit Brussel, Brussels, 1050, Belgium
| | - Charlotte Martin
- Research Group of Organic Chemistry, Vrije Universiteit Brussel, Brussels, 1050, Belgium
| | - Ulrich Hennecke
- Research Group of Organic Chemistry, Vrije Universiteit Brussel, Brussels, 1050, Belgium
| | - Steven Ballet
- Research Group of Organic Chemistry, Vrije Universiteit Brussel, Brussels, 1050, Belgium
| | - Ronnie G Willaert
- International Joint Research Group VUB-EPFL BioNanotechnology & NanoMedicine, Vrije Universiteit Brussel, Brussels, 1050, Belgium
- Research Group Structural Biology Brussels, Alliance Research Group VUB-UGent NanoMicrobiology, Vrije Universiteit Brussel, Brussels, 1050, Belgium
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Cojal González JD, Iyoda M, Rabe JP. Resonant Electron Tunneling Induces Isomerization of π-Expanded Oligothiophene Macrocycles in a 2D Crystal. Adv Sci (Weinh) 2022; 9:e2200557. [PMID: 35355440 PMCID: PMC9259718 DOI: 10.1002/advs.202200557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Revised: 02/24/2022] [Indexed: 06/14/2023]
Abstract
Macrocyclic oligothiophenes and their π-expanded derivatives constitute versatile building blocks for the design of (supra)molecularly engineered active interfaces, owing to their structural, chemical, and optoelectronic properties. Here, it is demonstrated how resonant tunneling effect induces single molecular isomerization in a 2D crystal, self-assembled at solid-liquid interfaces under ambient conditions. Monolayers of a series of four π-expanded oligothiophene macrocycles are investigated by means of scanning tunneling microscopy and scanning tunneling spectroscopy (STS) at the interface between their octanoic acid solutions and the basal plane of highly oriented pyrolytic graphite. Current-voltage characteristics confirm the donor-type character of the macrocycles, with the highest occupied molecular orbital and the lowest unoccupied molecular orbital (LUMO) positions consistent with time-dependent density functional theory calculations. Cyclic STS measurements show the redox isomerization from Z,Z-8T6A to its isomer E,E-8T6A occurring in the 2D crystal, due to the formation of a negatively charged species when the tunneling current is in resonance with the LUMO of the macrocycle.
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Affiliation(s)
- José D. Cojal González
- Department of Physics and IRIS AdlershofHumboldt‐Universität zu BerlinNewtonstr. 15BerlinD‐12489Germany
| | - Masahiko Iyoda
- Department of ChemistryGraduate School of ScienceTokyo Metropolitan UniversityHachiojiTokyo192‐0397Japan
| | - Jürgen P. Rabe
- Department of Physics and IRIS AdlershofHumboldt‐Universität zu BerlinNewtonstr. 15BerlinD‐12489Germany
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Zhang S, Chen J, Liu J, Pyles H, Baker D, Chen CL, De Yoreo JJ. Engineering Biomolecular Self-Assembly at Solid-Liquid Interfaces. Adv Mater 2021; 33:e1905784. [PMID: 32627885 DOI: 10.1002/adma.201905784] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Revised: 04/02/2020] [Accepted: 04/16/2020] [Indexed: 06/11/2023]
Abstract
Biomolecular self-assembly is a key process used by life to build functional materials from the "bottom up." In the last few decades, bioengineering and bionanotechnology have borrowed this strategy to design and synthesize numerous biomolecular and hybrid materials with diverse architectures and properties. However, engineering biomolecular self-assembly at solid-liquid interfaces into predesigned architectures lags the progress made in bulk solution both in practice and theory. Here, recent achievements in programming self-assembly of peptides, proteins, and peptoids at solid-liquid interfaces are summarized and corresponding applications are described. Recent advances in the physical understandings of self-assembly pathways obtained using in situ atomic force microscopy are also discussed. These advances will lead to novel strategies for designing biomaterials organized at and interfaced with inorganic surfaces.
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Affiliation(s)
- Shuai Zhang
- Department of Materials Science and Engineering, University of Washington, Seattle, WA, 98105, USA
- Physical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, USA
| | - Jiajun Chen
- Department of Materials Science and Engineering, University of Washington, Seattle, WA, 98105, USA
- Physical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, USA
| | - Jianli Liu
- Physical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, USA
- School of Materials Science and Engineering, Dongguan University of Technology, Dongguan, Guangdong, 523830, China
| | - Harley Pyles
- Department of Biochemistry, University of Washington, Seattle, WA, 98195, USA
- Institute for Protein Design, University of Washington, Seattle, WA, 98195, USA
| | - David Baker
- Department of Biochemistry, University of Washington, Seattle, WA, 98195, USA
- Institute for Protein Design, University of Washington, Seattle, WA, 98195, USA
- Howard Hughes Medical Institute, University of Washington, Seattle, WA, 98195, USA
| | - Chun-Long Chen
- Physical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, USA
- Department of Chemical Engineering, University of Washington, Seattle, WA, 98195, USA
| | - James J De Yoreo
- Department of Materials Science and Engineering, University of Washington, Seattle, WA, 98105, USA
- Physical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, USA
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Fukuma T. Improvements in fundamental performance of in-liquid frequency modulation atomic force microscopy. Microscopy (Oxf) 2020; 69:340-349. [PMID: 32780817 DOI: 10.1093/jmicro/dfaa045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Accepted: 07/31/2020] [Indexed: 12/28/2022] Open
Abstract
In-liquid frequency modulation atomic force microscopy (FM-AFM) has been used for visualizing subnanometer-scale surface structures of minerals, organic thin films and biological systems. In addition, three-dimensional atomic force microscopy (3D-AFM) has been developed by combining it with a three-dimensional (3D) tip scanning method. This method enabled the visualization of 3D distributions of water (i.e. hydration structures) and flexible molecular chains at subnanometer-scale resolution. While these applications highlighted the unique capabilities of FM-AFM, its force resolution, speed and stability are not necessarily at a satisfactory level for practical applications. Recently, there have been significant advancements in these fundamental performances. The force resolution was dramatically improved by using a small cantilever, which enabled the imaging of a 3D hydration structure even in pure water and made it possible to directly compare experimental results with simulated ones. In addition, the improved force resolution allowed the enhancement of imaging speed without compromising spatial resolution. To achieve this goal, efforts have been made for improving bandwidth, resonance frequency and/or latency of various components, including a high-speed phase-locked loop (PLL) circuit. With these improvements, now atomic-resolution in-liquid FM-AFM imaging can be performed at ∼1 s/frame. Furthermore, a Si-coating method was found to improve stability and reproducibility of atomic-resolution imaging owing to formation of a stable hydration structure on a tip apex. These improvements have opened up new possibilities of atomic-scale studies on solid-liquid interfacial phenomena by in-liquid FM-AFM.
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Affiliation(s)
- Takeshi Fukuma
- Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
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Wang S, Yang X, Wu F, Min L, Chen X, Hou X. Inner Surface Design of Functional Microchannels for Microscale Flow Control. Small 2020; 16:e1905318. [PMID: 31793747 DOI: 10.1002/smll.201905318] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 11/03/2019] [Indexed: 05/05/2023]
Abstract
Fluidic flow behaviors in microfluidics are dominated by the interfaces created between the fluids and the inner surface walls of microchannels. Microchannel inner surface designs, including the surface chemical modification, and the construction of micro-/nanostructures, are good examples of manipulating those interfaces between liquids and surfaces through tuning the chemical and physical properties of the inner walls of the microchannel. Therefore, the microchannel inner surface design plays critical roles in regulating microflows to enhance the capabilities of microfluidic systems for various applications. Most recently, the rapid progresses in micro-/nanofabrication technologies and fundamental materials have also made it possible to integrate increasingly complex chemical and physical surface modification strategies with the preparation of microchannels in microfluidics. Besides, a wave of researches focusing on the ideas of using liquids as dynamic surface materials is identified, and the unique characteristics endowed with liquid-liquid interfaces have revealed that the interesting phenomena can extend the scope of interfacial interactions determining microflow behaviors. This review extensively discusses the microchannel inner surface designs for microflow control, especially evaluates them from the perspectives of the interfaces resulting from the inner surface designs. In addition, prospective opportunities for the development of surface designs of microchannels, and their applications are provided with the potential to attract scientific interest in areas related to the rapid development and applications of various microchannel systems.
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Affiliation(s)
- Shuli Wang
- College of Chemistry and Chemical Engineering and State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, 361005, China
- Collaborative Innovation Center of Chemistry for Energy Materials, Xiamen University, Xiamen, 361005, China
| | - Xian Yang
- College of Chemistry and Chemical Engineering and State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, 361005, China
| | - Feng Wu
- Bionic and Soft Matter Research Institute, College of Physical Science and Technology, Xiamen University, Xiamen, 361005, China
- Fujian Provincial Key Laboratory for Soft Functional Materials Research, Xiamen University, Xiamen, 361005, China
| | - Lingli Min
- College of Chemistry and Chemical Engineering and State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, 361005, China
| | - Xinyu Chen
- College of Chemistry and Chemical Engineering and State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, 361005, China
| | - Xu Hou
- College of Chemistry and Chemical Engineering and State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen, 361005, China
- Collaborative Innovation Center of Chemistry for Energy Materials, Xiamen University, Xiamen, 361005, China
- Bionic and Soft Matter Research Institute, College of Physical Science and Technology, Xiamen University, Xiamen, 361005, China
- Fujian Provincial Key Laboratory for Soft Functional Materials Research, Xiamen University, Xiamen, 361005, China
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Yoon SG, Yang Y, Jin H, Lee WH, Sohn A, Kim SW, Park J, Kim YS. A Surface-Functionalized Ionovoltaic Device for Probing Ion-Specific Adsorption at the Solid-Liquid Interface. Adv Mater 2019; 31:e1806268. [PMID: 30484923 DOI: 10.1002/adma.201806268] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 10/31/2018] [Indexed: 06/09/2023]
Abstract
Aqueous ion-solid interfacial interactions at an electric double layer (EDL) are studied in various research fields. However, details of the interactions at the EDL are still not fully understood due to complexity induced from the specific conditions of the solid and liquid parts. Several technical tools for ion-solid interfacial probing are experimentally and practically proposed, but they still show limitations in applicability due to the complicated measurements. Recently, an energy conversion device based on ion dynamics (called ionovoltaic device) was also introduced as another monitoring tool for the EDL, showing applicability as a novel probing method for interfacial interactions. Herein, a monitoring technique for specific ion adsorption (Cu2+ and Pb2+ in the range of 5 × 10-6 -1000 × 10-6 m) in the solid-liquid interface based on the ionovoltaic device is newly demonstrated. The specific ion adsorption and the corresponding interfacial potentials profiles are also investigated to elucidate a working mechanism of the device. The results give the insight of molecular-level ion adsorption through macroscopic water-motion-induced electricity generation. The simple and cost-effective detection of the device provides an innovative route for monitoring specific adsorption and expandability as a monitoring tool for various solid-liquid interfacial phenomena that are unrevealed.
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Affiliation(s)
- Sun Geun Yoon
- Program in Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, 08826, Republic of Korea
| | - YoungJun Yang
- Program in Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Huding Jin
- Program in Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Won Hyung Lee
- Program in Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, 08826, Republic of Korea
| | - Ahrum Sohn
- School of Advanced Materials Science and Engineering, Sungkyunkwan University (SKKU), Suwon-si, Gyeonggi-do, 16419, Republic of Korea
| | - Sang-Woo Kim
- School of Advanced Materials Science and Engineering, Sungkyunkwan University (SKKU), Suwon-si, Gyeonggi-do, 16419, Republic of Korea
| | - Junwoo Park
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Youn Sang Kim
- Program in Nano Science and Technology, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, 08826, Republic of Korea
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Origuchi S, Kishimoto M, Yoshizawa M, Yoshimoto S. A Supramolecular Approach to the Preparation of Nanographene Adlayers Using Water-Soluble Molecular Capsules. Angew Chem Int Ed Engl 2018; 57:15481-15485. [PMID: 30259612 DOI: 10.1002/anie.201809258] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2018] [Indexed: 02/02/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are excellent building blocks for the creation of two-dimensional (2D) nanosheets. However, large PAHs tend to exhibit poor or no solubility in organic solvents and water. To overcome this issue, we employed water-soluble micellar capsules consisting of V-shaped amphiphilic molecules. Characteristic electrochemical behavior was observed in 0.1 m H2 SO4 in the presence of the water-soluble capsules containing PAHs, such as ovalene, circobiphenyl, and dicoronylene. Furthermore, under these conditions, PAHs were released from the capsules, resulting in the formation of a 2D adlayer of PAHs at the electrochemical interface. Finally, using electrochemical scanning tunneling microscopy, we demonstrate that our molecular containers based on water-soluble molecular capsules allow the facile preparation of 2D PAH adlayers in addition to structurally controlling nanostructure formation on Au surfaces.
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Affiliation(s)
- Sakura Origuchi
- Graduate School of Science and Technology, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto, 860-8555, Japan
| | - Mai Kishimoto
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
| | - Michito Yoshizawa
- Laboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
| | - Soichiro Yoshimoto
- Division of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto, 860-8555, Japan
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Abstract
Liquid cell transmission electron microscopy (TEM) has attracted significant interest in recent years. With nanofabricated liquid cells, it has been possible to image through liquids using TEM with subnanometer resolution, and many previously unseen materials dynamics have been revealed. Liquid cell TEM has been applied to many areas of research, ranging from chemistry to physics, materials science, and biology. So far, topics of study include nanoparticle growth and assembly, electrochemical deposition and lithiation for batteries, tracking and manipulation of nanoparticles, catalysis, and imaging of biological materials. In this article, we first review the development of liquid cell TEM and then highlight progress in various areas of research. In the study of nanoparticle growth, the electron beam can serve both as the illumination source for imaging and as the input energy for reactions. However, many other research topics require the control of electron beam effects to minimize electron beam damage. We discuss efforts to understand electron beam-liquid matter interactions. Finally, we provide a perspective on future challenges and opportunities in liquid cell TEM.
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Affiliation(s)
- Hong-Gang Liao
- Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720;
| | - Haimei Zheng
- Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720; .,Department of Materials Science and Engineering, University of California, Berkeley, California 94720
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Franke M, Marchini F, Jux N, Steinrück HP, Lytken O, Williams FJ. Zinc Porphyrin Metal-Center Exchange at the Solid-Liquid Interface. Chemistry 2016; 22:8520-4. [PMID: 27166595 DOI: 10.1002/chem.201600634] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2016] [Indexed: 11/07/2022]
Abstract
Demetalation of zinc 5,10,15,20-tetraphenylporphyrin (ZnTPP) under acidic conditions and ion exchange with Cu(2+) ions at neutral pH are both rapid reactions in the liquid medium. However, for ZnTPP monolayers adsorbed on a Au(111) surface exposed to aqueous solution, we find that, although ion exchange takes place rapidly as expected, demetalation does not occur, even at pH values as low as 0. Based on this, we conclude that metal center exchange on the surface does not proceed through a free-base porphyrin as an intermediate. Furthermore, once formed, CuTPP is stable on the surface and the reverse exchange from CuTPP to ZnTPP in the presence of Zn(2+) ions could not be achieved. The preference for copper is so strong that even an attempt to exchange adsorbed ZnTPP with Ni(2+) ions in the presence of traces of Cu(2+) yielded CuTPP rather than NiTPP.
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Affiliation(s)
- Matthias Franke
- Institute of Physical Chemistry II, Friedrich-Alexander-University Erlangen-Nürnberg, Erlangen, Germany
| | - Florencia Marchini
- Department of Inorganic, Analytical and Physical Chemistry, University of Buenos Aires, Buenos Aires, Argentina
| | - Norbert Jux
- Institute of Organic Chemistry II, Friedrich-Alexander-University Erlangen-Nürnberg, Erlangen, Germany
| | - Hans-Peter Steinrück
- Institute of Physical Chemistry II, Friedrich-Alexander-University Erlangen-Nürnberg, Erlangen, Germany
| | - Ole Lytken
- Institute of Physical Chemistry II, Friedrich-Alexander-University Erlangen-Nürnberg, Erlangen, Germany.
| | - Federico J Williams
- Department of Inorganic, Analytical and Physical Chemistry, University of Buenos Aires, Buenos Aires, Argentina.
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