Unique Multi-Hetero-Interface Engineering of Fe-Doped Co-LDH@MoS2-Ni3S2 Nanoflower-Based Electrocatalyst for Overall Water-Splitting: An Experimental and Theoretical Investigation

Herein, a self-supported, robust, and noble-metal-free 3D hierarchical interface-rich Fe-doped Co-LDH@MoS2-Ni3S2/NF heterostructure electrocatalyst has been prepared through a controllable two-step hydrothermal process. The resultant electrode shows low overpotential of ~95 mV for hydrogen evolution reaction (HER), ~220 mV for the oxygen evolution reaction (OER), and the two-electrode system requires only a cell voltage of ~1.54 V at 10 mA cm-2 current density, respectively. Extensive ab initio calculations were carried out to find out the overpotential for HER, orbital interaction through the determination of electron density of states and quantification of charge transfer by Bader charge analysis. The computed overpotential matched closely with the experimental data. The superior HER performance of the tri-layer is enhanced due to the charge transfer (1.7444 e) to Fe-doped Co-LDH from Ni3S2-MoS2 hybrid. This research strategy paves an effective pathway for affordable green H2 production and future efficient non-precious bifunctional electrocatalyst design for overall water electrolysis.

Acceleration and transport of relativistic electrons in the jets of the microquasar SS 433

SS 433 is a microquasar, a stellar binary system that launches collimated relativistic jets. We observed SS 433 in gamma rays using the High Energy Stereoscopic System (H.E.S.S.) and found an energy-dependent shift in the apparent position of the gamma-ray emission from the parsec-scale jets. These observations trace the energetic electron population and indicate that inverse Compton scattering is the emission mechanism of the gamma rays. Our modeling of the energy-dependent gamma-ray morphology constrains the location of particle acceleration and requires an abrupt deceleration of the jet flow. We infer the presence of shocks on either side of the binary system, at distances of 25 to 30 parsecs, and that self-collimation of the precessing jets forms the shocks, which then efficiently accelerate electrons.

Metal-organic framework-derived advanced oxygen electrocatalysts as air-cathodes for Zn-air batteries: recent trends and future perspectives

Electrochemical energy storage devices with stable performance, high power output, and energy density are urgently needed to meet the global energy demand. Among the different electrochemical energy storage devices, batteries have become the most promising energy technologies and ranked as a highly investigated research subject. Recently, metal-air batteries especially Zn-air batteries (ZABs) have attracted enormous scientific interest in the electrochemical community due to their ease of operation, sustainability, environmental friendliness, and high efficiency. The oxygen electrocatalytic reactions [oxygen reduction reaction (ORR) and oxygen evolution reaction (OER)] are the two fundamental reactions for the development of ZABs. Noble metal-based electrocatalysts are widely considered as the benchmark for oxygen electrocatalysis, but their practical application in rechargeable ZAB is hindered due to several shortcomings. Thus, to replace noble metal-based catalysts, a wide range of transition-metal-based materials and heteroatom-doped metal-free carbon materials has been extensively investigated as oxygen electrocatalysts for ZABs. Recently, metal-organic frameworks (MOFs) with unique structural flexibility and uniformly dispersed active sites have become attractive precursors for the synthesis of a large variety of advanced functional materials. Herein, we summarize the recent progress of MOF-derived oxygen electrocatalysts (MOF-derived carbon nanomaterials, MOF-derived alloys/nanoparticles, and MOF-derived single-atom electrocatalysts) for ZABs. Specifically, we highlight MOF-derived single-atom electrocatalysts owing to the wide exploration of these emerging materials in electrocatalysis. The influence of the active sites, structural/compositional design, and porosity of MOF-derived advanced materials on the oxygen electrocatalytic performances is also discussed. Finally, the existing challenges and prospects of MOF-derived electrocatalysts in ZABs are briefly highlighted.

Monoclonal antibody and protein therapeutic formulations for subcutaneous delivery: high-concentration, low-volume vs. low-concentration, high-volume

Biologic drugs are used to treat a variety of cancers and chronic diseases. While most of these treatments are administered intravenously by trained healthcare professionals, a noticeable trend has emerged favoring subcutaneous (SC) administration. SC administration of biologics poses several challenges. Biologic drugs often require higher doses for optimal efficacy, surpassing the low volume capacity of traditional SC delivery methods like autoinjectors. Consequently, high concentrations of active ingredients are needed, creating time-consuming formulation obstacles. Alternatives to traditional SC delivery systems are therefore needed to support higher-volume biologic formulations and to reduce development time and other risks associated with high-concentration biologic formulations. Here, we outline key considerations for SC biologic drug formulations and delivery and explore a paradigm shift: the flexibility afforded by low-to-moderate-concentration drugs in high-volume formulations as an alternative to the traditionally difficult approach of high-concentration, low-volume SC formulation delivery.

Gap Statistics for Confined Particles with Power-Law Interactions

We consider the N particle classical Riesz gas confined in a one-dimensional external harmonic potential with power-law interaction of the form 1/r^{k}, where r is the separation between particles. As special limits it contains several systems such as Dyson's log-gas (k→0^{+}), the Calogero-Moser model (k=2), the 1D one-component plasma (k=-1), and the hard-rod gas (k→∞). Despite its growing importance, only large-N field theory and average density profile are known for general k. In this Letter, we study the fluctuations in the system by looking at the statistics of the gap between successive particles. This quantity is analogous to the well-known level-spacing statistics which is ubiquitous in several branches of physics. We show that the variance goes as N^{-b_{k}} and we find the k dependence of b_{k} via direct Monte Carlo simulations. We provide supporting arguments based on microscopic Hessian calculation and a quadratic field theory approach. We compute the gap distribution and study its system size scaling. Except in the range -1<k<0, we find scaling for all k>-2 with both Gaussian and non-Gaussian scaling forms.

National prevalence and outcomes of coronary chronic total occlusion revascularization in patients with congestive heart failure

Background

There is limited data on the prevalence and outcomes of coronary artery chronic total occlusion (CTO) revascularization in patients with congestive heart failure.

Purpose

Our goal is to study the prevalence and outcomes of CTO revascularization in terms of in-hospital mortality, re-admission rate, and complications in patients stratified by their heart failure status.

Methods

Patients with CTO who underwent percutaneous coronary intervention (PCI) were included for the years 2010 - 2018 from the national readmission database. We compared the national trends, prevalence and outcomes of CTO revascularization in patients with no heart failure, heart failure with preserved ejection fraction (HFpEF), and heart failure with reduced ejection fraction (HFrEF) using one-way ANOVA and logistic regression.

Results

A total of 166,244 (69±11 years, 26% women) patients with coronary CTO who underwent PCI were identified. Of these, 131,664 (79%) patients had no clinical diagnosis of HF, while 26,612 (16%) patients had HFpEF, and 7,968 (5%) patients had HFrEF. Majority of patients with HFpEF and HFrEF had a moderate to high Elixhauser comorbidity score, while those with no HF had mostly low to moderate score (p&lt;0.001). We observed a steady decrease in annual CTO revascularization from a total of 24,708 in 2010 to 13,505 in 2018. However, the percentage of CTO revascularization in patients with HFrEF has increased during this period from 2% in 2010 to 8% in 2018. Interestingly, patients with HFpEF had higher rates of cardiac arrest (Odds Ratio (OR) 2.2; 95% Confidence Interval (CI) 1.8–2.7, p&lt;0.001), ventricular tachycardia/fibrillation (OR 3.7; 95% CI 3.4–4.0, p&lt;0.001), use of mechanical support (OR 5.5; 95% CI 4.9–6.2, p&lt;0.001), and death during admission (OR 2.2; 95% CI 1.8–2.7, p&lt;0.001) than those with no HF and with HFrEF. Similarly, patients with HFpEF had higher rates of intensive care unit admission (9%), than those with HFrEF (5%), and no HF (2%) (p&lt;0.001). Readmission rates were similar across all three groups (0.5–0.7%, p=0.06). The median cost of hospitalization was significantly higher in the HFpEF group compared to the other groups ($98,366, p&lt;0.001).

Conclusion

In this cohort of patients, we observed an overall annual decline in CTO revascularization over the 8-year study period. Despite this decline, we observed an increase in CTO revascularization in patient with HFrEF. Interestingly, patients with HFpEF had elevated in hospital mortality and higher rates of cardiac arrest, ventricular arrhythmias, mechanical circulatory support, and admission to the cardiac care unit than those with no HF, or those with HFrEF. Despite their persevered ejection fraction, our findings suggest that CTO revascularization in with patients with HFpEF carry a significant risk, thus risks versus benefits in this group of patients should be weighed considerably before attempting revascularization.

Funding Acknowledgement

Type of funding sources: None.

Advanced Oxygen Electrocatalyst for Air-Breathing Electrode in Zn-Air Batteries

The electrochemical reduction of oxygen to water and the evolution of oxygen from water are two important electrode reactions extensively studied for the development of electrochemical energy conversion and storage technologies based on oxygen electrocatalysis. The development of an inexpensive, highly active, and durable nonprecious-metal-based oxygen electrocatalyst is indispensable for emerging energy technologies, including anion exchange membrane fuel cells, metal-air batteries (MABs), water electrolyzers, etc. The activity of an oxygen electrocatalyst largely decides the overall energy storage performance of these devices. Although the catalytic activities of Pt and Ru/Ir-based catalysts toward an oxygen reduction reaction (ORR) and an oxygen evolution reaction (OER) are known, the high cost and lack of durability limit their extensive use for practical applications. This review article highlights the oxygen electrocatalytic activity of the emerging non-Pt and non-Ru/Ir oxygen electrocatalysts including transition-metal-based random alloys, intermetallics, metal-coordinated nitrogen-doped carbon (M-N-C), and transition metal phosphides, nitrides, etc., for the development of an air-breathing electrode for aqueous primary and secondary zinc-air batteries (ZABs). Rational surface and chemical engineering of these electrocatalysts is required to achieve the desired oxygen electrocatalytic activity. The surface engineering increases the number of active sites, whereas the chemical engineering enhances the intrinsic activity of the catalyst. The encapsulation or integration of the active catalyst with undoped or heteroatom-doped carbon nanostructures affords an enhanced durability to the active catalyst. In many cases, the synergistic effect between the heteroatom-doped carbon matrix and the active catalyst plays an important role in controlling the catalytic activity. The ORR activity of these catalysts is evaluated in terms of onset potential, number of electrons transferred, limiting current density, and durability. The bifunctional oxygen electrocatalytic activity and ZAB performance, on the other hand, are measured in terms of potential gap between the ORR and OER, ΔE = E_j10^OER - E_1/2^ORR, specific capacity, peak power density, open circuit voltage, voltaic efficiency, and charge-discharge cycling stability. The nonprecious metal electrocatalyst-based ZABs are very promising and they deliver high power density, specific capacity, and round-trip efficiency. The active site for oxygen electrocatalysis and challenges associated with carbon support is briefly addressed. Despite the considerable progress made with the emerging electrocatalysts in recent years, several issues are yet to be addressed to achieve the commercial potential of rechargeable ZAB for practical applications.

Active microrheology using pulsed optical tweezers to probe viscoelasticity of lamin A

Lamins are nucleoskeletal proteins of mammalian cells that stabilize the structure and maintain the rigidity of the nucleus. These type V intermediate filament proteins which are predominantly of A and B types provide necessary tensile strength to the nucleus. Single amino acid missense mutations occurring all over the lamin A protein form a cluster of human diseases termed as laminopathies, most of which principally affect the muscle and cardiac tissues responsible for load bearing functionalities of the body. One such mutation is A350P which causes dilated cardiomyopathy in patients. It is postulated that a change from alanine to proline in the α-helical coiled-coil forming 2B rod domain of the protein might severely disrupt the propensity of the filaments to polymerise into functional higher order structures required to form a fully functional lamina with its characteristic elasticity. In this study, we have elucidated for the very first time, the application of active microrheology employing oscillating optical tweezers to investigate any alterations in the viscoelastic parameters of the mutant protein meshwork in vitro, which might translate into possible changes in nuclear plasticity. We confirmed our findings from this robust yet fast method by imaging both the wild type and mutant lamin A networks using a super resolution microscope, and observed changes in the mesh size which corroborate our measured changes in the viscoelastic parameters of the lamins. This method could thus be extended to conduct microrheological measurements on any intermediate filament protein thus bearing significant implications in laminopathies and other diseases associated with intermediate filaments.

Hierarchical Hollow MOF-Derived Bamboo-like N-doped Carbon Nanotube-Encapsulated Co0.25Ni0.75 Alloy: An Efficient Bifunctional Oxygen Electrocatalyst for Zinc-Air Battery

The synthesis of nonprecious electrocatalysts for oxygen electrocatalysis is of considerable interest for the development of electrochemical energy devices. Herein, we demonstrate a facile approach for the synthesis of bamboo-like nitrogen-doped carbon nanotube-encapsulated Co_0.25Ni_0.75 alloy electrocatalyst (Co_0.25Ni_0.75@NCNT) and its bifunctional oxygen electrocatalytic performance toward oxygen reduction and oxygen evolution reactions. The Co_0.25Ni_0.75 alloy wrapped with NCNT is obtained by a one-step carbothermal reduction approach using dicyandiamide and NiCo-MOF precursors. Dicyandiamide acts as a nitrogen source, and the in situ generated Co_0.25Ni_0.75 alloy nanoparticles catalyze the growth of bamboo-like NCNTs. The hollow NiCo-MOF plays a sacrificial role in providing a suitable environment for the controlled growth of Co_0.25Ni_0.75 alloy and NCNT. Co_0.25Ni_0.75@NCNT efficiently catalyzes both the oxygen reduction reaction (ORR) and the oxygen evolution reaction (OER) at a favorable overpotential. It shows a low potential gap (ΔE) of ∼0.8 V between the two reactions, and it qualifies for the development of air cathode in metal-air batteries. The enhanced bifunctional activity and excellent durability stem from the chemical composition and the synergistic effect between Co_0.25Ni_0.75 alloy and encapsulating NCNT. The original phase and morphology of the catalyst is preserved after an extensive durability test. Aqueous rechargeable Zn-air battery (ZAB) is fabricated using a Co_0.25Ni_0.75@NCNT-based air cathode. The battery has high open-circuit voltage (1.53 V) and a maximum peak power density of 167 mW cm^-2 with only 1.6% loss in the voltaic efficiency after 36 h charge-discharge cycles. As a proof-of-concept demonstration, the as-fabricated ZAB is successfully used for the electrochemical water splitting in alkaline solution.

Origin, genetic diversity and evolution of Andaman local duck, a native duck germplasm of an insular region of India

Domestic ducks are of paramount importance as a cheap source of protein in rural India. Andaman local duck (ALD) is an indigenous avian genetic resource of Andaman and Nicobar islands (ANI) and is mainly distributed in Middle and Northern parts of these islands. Negligence has brought this breed on the edge of extinction necessitating immediate conservation efforts. Here, we report the genetic diversity, population structure and matrilineal genetic root of ALD. Partial mtDNA D-loop sequences were analyzed in 71 ALD samples and analysis revealed 19 polymorphic sites and 13 haplotypes. Estimated haplotype (Hd ± SD) and nucleotide diversity (π ± SD) were 0.881 ± 0.017 and 0.00897 ± 0.00078 respectively. The high genetic diversity of ALD indicates introgression of genetic material from other local duck breeds. In addition, it can be postulated that ALD bearing high genetic diversity has strong ability to adapt to environmental changes and can withstand impending climate change. Phylogenetic and network analysis indicate that ALD falls under Eurasian clade of mallard and ALD forms three clusters; one cluster is phylogenetically close to Southeast Asian countries, one close to Southern part of mainland India and the third one forms an independent cluster. Therefore, ALD might have migrated either from Southeast Asian countries which enjoy a close cultural bondage with ANI from time immemorial or from Southern part of India. The independent cluster may have evolved locally in these islands and natural selection pressure imposed by environmental conditions might be the driving force for evaluation of these duck haplotypes; which mimics Darwin's theory of natural selection. The results of the study will be beneficial for formulating future breeding programme and conservation strategy towards sustainable development of the duck breed.

Role of seminal MDA, ROS, and antioxidants in cryopreservation and their kinetics under the influence of ejaculatory abstinence in bovine semen

Despite many cryopreservation techniques in bovine semen, various stressors' detrimental effects remain a significant issue. The present study targeted to assess the role of semen quality parameters, sperm function tests, lipid peroxidation, reactive oxygen species (ROS), and different antioxidants in the cryopreservation of bovine semen. Further, the kinetics of lipid peroxidation, ROS, and antioxidants on repeated semen collection under short ejaculatory abstinence were studied. We designed a comparative study where bulls were grouped into good and low freezable semen groups (Freeze-groups) based on their post-thaw motility. All the bulls included had similar initial motility and qualified minimum standards for initial semen parameters viz. semen volume and sperm concentration. The present study detected a higher lipid peroxidation and ROS viz. superoxide anions (•O2-) and a lower total antioxidant capacity (TAC) in the low freeze-group compared to the good freeze-group. The ROS and antioxidants showed unique kinetics on repeated semen collection at short intervals, and no significant change was detected in semen volume, sperm motility, and sperm concentration. This study detected higher head abnormalities and poor acrosome integrity in the low freeze-groups. The present study results indicated that the sperm head might be the most vulnerable part of the sperm to cryopreservation stress. The present study finds significantly higher lipid peroxidation and ROS levels and reduced antioxidant capacity as the primary reasons for low cryopreservability. Further, repeated semen collection with a shorter or lack of abstinence does not impose any significant change in the semen volume and sperm concentration; moreover, it could be beneficial for higher antioxidant levels and lower lipid peroxidation levels. As seminal plasma has both inhibitory and stimulatory roles in sperm function and cryopreservation, identifying the critical role players of seminal plasma and identifying sperm related changes in cryopreservation could predict the cryopreservability potential of semen.

Development of a position-sensitive fast scintillator (LaBr3(Ce)) detector setup for gamma-ray imaging application

We have characterized a Cerium doped Lanthanum Bromide (LaBr3(Ce) ) crystal coupled with the position-sensitive photo-multiplier system for the gamma-ray imaging application. One can use this detector set-up for the scanning of high purity germanium detectors for pulse shape analysis in gamma-ray spectroscopy experiments and the image formation of an object by Compton back-scattering . The sensor has been tested for energy, timing and position information of the gamma-rays interacting within the detector crystal. The GEANT4 simulation results are consistent with the experimental results. We have reconstructed the image of irradiation spots in different positions throughout the detector crystal. Position resolution is found to be around 3.5 mm with the 2 mm collimated gamma-rays. The 2-d image of hexagonal Bismuth Germanate (BGO) crystal and a cylindrical LaBr3(Ce) crystal have been reconstructed in coincidence technique. The performance of the detector for imaging application has been investigated by coincidence technique in GEANT4 simulation and compared with the experimental data. We have reconstructed the 2-d images of objects with various geometrical shapes by Compton back-scattered events of the gamma-rays. This position-sensitive detector can be used as an absorber of a Compton camera for the image reconstruction of an extended radioactive source. One can also use this kind of set-up as in radiation imaging and many other applications where the energy and source position of the gamma-ray is the main interest.

Construction of FeCo2O4@N-Doped Carbon Dots Nanoflowers as Binder Free Electrode for Reduction and Oxidation of Water

Electrochemical water splitting is known as a potential approach for sustainable energy conversion; it produces H₂ fuel by utilizing transition metal-based catalysts. We report a facile synthesis of FeCo₂O₄@carbon dots (CDs) nanoflowers supported on nickel foam through a hydrothermal technique in the absence of organic solvents and an inert environment. The synthesized material with a judicious choice of CDs shows superior performance in hydrogen and oxygen evolution reactions (HER and OER) compared to the FeCo₂O₄ electrode alone in alkaline media. For HER, the overpotential of 205 mV was able to produce current densities of up to 10 mA cm⁻², whereas an overpotential of 393 mV was needed to obtain a current density of up to 50 mA cm⁻² for OER. The synergistic effect between CDs and FeCo₂O₄ accounts for the excellent electrocatalytic activity, since CDs offer exposed active sites and subsequently promote the electrochemical reaction by enhancing the electron transfer processes. Hence, this procedure offers an effective approach for constructing metal oxide-integrated CDs as a catalytic support system to improve the performance of electrochemical water splitting.

Tracing the genetic root of Trinket cattle: an endangered cattle population of a small isolated island of Nicobar group of islands

Trinket cattle are the inhabitant of a small island called Trinket, which is one of the picturesque islands of Andaman. This herd is thought to be of Danish leftover during their dynasty in Nicobar archipelago. When the island was abandoned by foreign invaders, indigenes utilized the animals for the purpose of meat. As a result, the cattle became semi-feral in nature. After the Great Sumatra earthquake and tsunami of Indian Ocean in 2004, Trinket island was left abandoned by indigenes and the cattle became totally feral in nature. To trace the genetic root of the cattle, this study has been undertaken based on the sequence information of the mitochondrial D-loop and cytochrome b gene. The genomic DNA was extracted from the blood samples of the Trinket cattle and was used for amplification of mitochondrial markers, and the sequence information was generated by Sanger sequencing. The analysis of sequence information revealed that the Trinket cattle belongs to Bos indicus (I) haplotype, sub-haplotype I2. The presence of I2 sub-haplotype in Trinket cattle may be due to the expansion of this I2 haplotype towards Southeast Asian countries. This is a novel input for the formulation of breeding strategy towards conservation of eco-friendly sustainable livestock in the isolated island ecosystem.

Complete mitogenome sequencing of Andaman buffalo: an endangered germplasm of Andaman and Nicobar Islands, India

Andaman buffalo is an indigenous buffalo of Andaman and Nicobar Islands, India. Over the last decade, it has witnessed a rapid decline in population, necessitating its immediate characterization and conservation. The present study reports the complete mitogenome profile of Andaman buffalo which is 16,359 bp in length and comprised of 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs and two ribosomal RNAs. In addition, one A + T rich region (D-loop) was also present. A biasness towards A and T base was observed in all the genes. All the PCGs except ND6 were present on heavy strand. Start codons for all the 13 PCGs were ATN codon and abbreviated/truncated stop codons were observed in ND1, ND2, COX3, ND3 and ND4. The phylogenetic analysis revealed that the Andaman buffalo is closely related to buffalo from India and China. The results from this study will help in sketching the conservation plan of the threatened breed.

Harmonically Confined Particles with Long-Range Repulsive Interactions

We study an interacting system of N classical particles on a line at thermal equilibrium. The particles are confined by a harmonic trap and repel each other via pairwise interaction potential that behaves as a power law ∝∑[under i≠j][over N]|x_{i}-x_{j}|^{-k} (with k>-2) of their mutual distance. This is a generalization of the well-known cases of the one-component plasma (k=-1), Dyson's log gas (k→0^{+}), and the Calogero-Moser model (k=2). Because of the competition between harmonic confinement and pairwise repulsion, the particles spread over a finite region of space for all k>-2. We compute exactly the average density profile for large N for all k>-2 and show that while it is independent of temperature for sufficiently low temperature, it has a rich and nontrivial dependence on k with distinct behavior for -2<k<1, k>1 and k=1.

Mitochondrial landscape of indigenous pig germplasm of Andaman and Nicobar Islands

Nicobari pig and Andaman Desi pig are indigenous pig germplasm of Andaman and Nicobar islands, India. Over the last two decades, the pig breeds witnessed a rapid decline in population, necessitating immediate characterization and conservation. The present study depicts the complete mitochondrial genome sequence of Nicobari pig and Andaman Desi pig. The mitogenomes of both the breeds encode 37 genes including 13 protein coding genes, 22 tRNAs, and two ribosomal RNA genes. In addition, a control region (D-loop) was also present. Phylogenetic analysis showed that Nicobari is phylogenetically close to Banna mini and Breed I pig, whereas Andaman Desi pig is close to Mong cai and Jinhua pig breeds. The results of the study will be helpful for formulating of conservation strategy of the native swine breeds.

Chlorogenic acid-mediated chemical defence of plants against insect herbivores

Chlorogenic acid is one of the most abundant beneficial polyphenols in plants and is well known as a nutritional antioxidant in plant-based foods. Apart from its dietary antioxidant activity, it has been proved to be an efficient defence molecule against a broad range of insect herbivores. In the last two decades, several reports have shown the effectiveness of chlorogenic acid in insect growth deterrence. The pathway for chlorogenic acid biosynthesis in plants was previously elucidated, and metabolic engineering of the principal pathway showed high chlorogenic acid production in tomato plants. Herbivore-mediated induction of chlorogenic acid biosynthesis was also demonstrated both at metabolite and transcript level, although herbivore-mediated molecular regulation of chlorogenic acid biosynthesis is not yet fully elucidated. In this communication, we present our views on the efficacy of chlorogenic acid as an anti-herbivore defence molecule in plants and also discuss its future outlook.

GhSTOP1, a C2H2 type zinc finger transcription factor is essential for aluminum and proton stress tolerance and lateral root initiation in cotton

Aluminum (Al) and proton (H⁺ ) ions are major acid soil stress factors deleteriously affecting plant root growth and crop yield. In our preliminary studies, cotton (Gossypium hirsutum L.) seedlings displayed very sensitive phenotypes to Al and H⁺ rhizotoxicities. Based on previous Arabidopsis results, we aimed to characterise the Al stress responsive Sensitive to Proton rhizotoxicity 1 (GhSTOP1) transcription system in cotton using RNAi-mediated down-regulation. With the help of seed embryo apex explants, we developed transgenic cotton plants overexpressing a GhSTOP1-RNAi cassette with NPTII selection. Kanamycin-tolerant T1 seedlings were further considered for Al and H⁺ stress tolerance studies. Down-regulation of the GhSTOP1 increased sensitivity to Al and proton rhizotoxicities, and root growth was significantly reduced in RNAi lines. The expression profile of GhALMT1 (Aluminum-activated Malate Transporter 1), GhMATE (Multidrug and Toxic Compound Extrusion), GhALS3 (Aluminium Sensitive 3) and key genes involved in the GABA shunt were down-regulated in the transgenic RNAi lines. Additionally, the lateral root initiation process was delayed and expression of GhNAC1, which is involved in lateral roots, was also suppressed in transgenic lines. Besides, overexpression of GhSTOP1 in Arabidopsis accelerated root growth and AtMATE and AtALMT1 expression under Al stress conditions. These analyses indicate that GhSTOP1 is essential for the expression of several genes which are necessary for acid soil tolerance mechanisms and lateral root initiation.