426
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Rossaro L, Dowd SR, Ho C, Van Thiel DH. 19F nuclear magnetic resonance studies of cyclosporine and model unilamellar vesicles: where does the drug sit within the membrane? Transplant Proc 1988; 20:41-5. [PMID: 3363647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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427
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Brindle KM, Rajagopalan B, Williams DS, Detre JA, Simplaceanu E, Ho C, Radda GK. 31P NMR measurements of myocardial pH in vivo. Biochem Biophys Res Commun 1988; 151:70-7. [PMID: 3348798 DOI: 10.1016/0006-291x(88)90560-8] [Citation(s) in RCA: 45] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A 31P NMR magnetization transfer method for measuring myocardial pH in vivo is demonstrated in the lamb, dog and cat. The method involves measuring the difference in chemical shift between the resonances of phosphocreatine and inorganic phosphate in magnetization transfer difference spectra in which the gamma-phosphate resonance of ATP has been saturated. The method has been verified by measuring the chemical shift difference between the resonances of 2-deoxyglucose 6-phosphate and phosphocreatine following infusion of the animals with 2-deoxyglucose. The measured pH values are significantly lower than those obtained in previous studies on the heart in vivo.
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428
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Ching C, Ho C, Ruthven D. Experimental study of a simulated counter-current adsorption system—VI. Non-linear systems. Chem Eng Sci 1988. [DOI: 10.1016/0009-2509(88)87029-5] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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429
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Ho C, Chua W, Law E, Swaminathan R. Falsely elevated CSF total protein due to carryover in a discrete analyzer (Beckman Astra-8). JOURNAL OF CLINICAL CHEMISTRY AND CLINICAL BIOCHEMISTRY. ZEITSCHRIFT FUR KLINISCHE CHEMIE UND KLINISCHE BIOCHEMIE 1987; 25:915-7. [PMID: 3443827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Falsely elevated values for CSF total protein, as determined in the Beckman Astra-8 Total Protein Module, were shown to be due to a combined effect of sample cross-contamination and reaction cup contamination by serum samples on the same sample tray. Normal CSF may be misdiagnosed as having an abnormally high protein concentration, due to this interference by normal serum samples. To avoid this carryover phenomenon, it is recommended that 3 saline samples be analysed for total protein before the analysis of the CSF samples; alternatively, all the CSF samples should be analysed separately in one batch.
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430
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431
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Russu IM, Ho NT, Ho C. A proton nuclear Overhauser effect investigation of the subunit interfaces in human normal adult hemoglobin. BIOCHIMICA ET BIOPHYSICA ACTA 1987; 914:40-8. [PMID: 3607061 DOI: 10.1016/0167-4838(87)90159-2] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
High-resolution proton nuclear magnetic resonance spectroscopy and nuclear Overhauser effects for the low-field exchangeable proton resonances of human normal adult hemoglobin in aqueous solvents are being used to confirm and extend the assignments of these resonances to specific protons at the intersubunit interfaces of the molecule. Most of these exchangeable proton resonances of human normal adult hemoglobin have been found to be absent in the spectra of isolated alpha or beta subunits. This finding indicates that they are specific spectral markers for the quaternary structure of the hemoglobin tetramer. Based on the nuclear Overhauser effect results, we have assigned the exchangeable proton resonance at +7.4 ppm downfield from H2O to the hydrogen-bonded proton between alpha 103(G10)His and beta 108(G10)Asn at the alpha 1 beta 1 interface. The nuclear Overhauser effect results have also confirmed the assignments of the exchangeable proton resonances at +9.4 and +8.2 ppm downfield from H2O previously proposed by workers in this laboratory based on a comparison of human normal adult hemoglobin and appropriate mutant hemoglobins. This independent confirmation of previously proposed assignments is necessary in view of the possible long-range conformational effects of single amino-acid substitutions in mutant hemoglobin molecules.
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432
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Miura S, Ikeda-Saito M, Yonetani T, Ho C. Oxygen equilibrium studies of cross-linked asymmetrical cyanomet valency hybrid hemoglobins: models for partially oxygenated species. Biochemistry 1987; 26:2149-55. [PMID: 3620444 DOI: 10.1021/bi00382a013] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Oxygen equilibrium curves have been measured to determine the binding constant at each oxygenation step (Ki) for various cross-linked hemoglobins, (alpha beta)A(alpha beta)CXL, (alpha +CN beta)A(alpha beta)CXL, (alpha beta +CN)A(alpha beta)CXL, (alpha +CN beta +CN)A(alpha beta)CXL, and (alpha beta +CN)A(alpha +CN beta)CXL, where the subscripts A and C denote that the alpha beta dimer is derived from human normal adult hemoglobin and mutant hemoglobin C (beta 6Glu----Lys), respectively, and XL denotes cross-linking between the lysyl residues at position 82 in the two beta chains by bis(3,5-dibromosalicyl) fumarate as described by Miura and Ho [Miura, S., & Ho, C. (1982) Biochemistry 21, 6280-6287]. The oxygen equilibrium data indicate that the oxygen affinity increases with the number of cyanomet hemes carried by the cross-linked mixed valency hybrid hemoglobins. The oxygen binding property depends not only on the number of the subunits carrying cyanomet hemes but also on the distribution of cyanomet hemes among the four subunits. A striking effect is observed in singly cyanomet valency hybrid hemoglobins; namely, (alpha +CN beta)A(alpha beta)CXL exhibits lower oxygen affinity and higher cooperativity than (alpha beta +CN)A(alpha beta)CXL. The magnitude of the Adair constants and their pH dependency of (alpha +CN beta)A(alpha beta)CXL (Ki, i = 1-3) are analogous to those of the Adair constants of (alpha beta)A(alpha beta)CXL (Ki, i = 2-4), whereas such an analogy is not observed between (alpha beta +CN)A(alpha beta)CXL and (alpha beta)A(alpha beta)CXL. The doubly cyanomet mixed valency hybrid cross-linked hemoglobins exhibit high oxygen affinity and reduced cooperativity, and their Adair constants are not analogous to K3 and K4 of (alpha beta)A(alpha beta)CXL.(ABSTRACT TRUNCATED AT 250 WORDS)
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433
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Rule GS, Pratt EA, Simplaceanu V, Ho C. Nuclear magnetic resonance and molecular genetic studies of the membrane-bound D-lactate dehydrogenase of Escherichia coli. Biochemistry 1987; 26:549-56. [PMID: 3548821 DOI: 10.1021/bi00376a029] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
In this study we demonstrate the potential of combining fluorine-19 nuclear magnetic resonance (NMR) spectroscopy with molecular genetics. We are using the membrane-bound enzyme D-lactate dehydrogenase of Escherichia coli as a model system to characterize interactions between proteins and lipids. We have labeled D-lactate dehydrogenase with 4-, 5-, and 6-fluorotryptophans and obtained high-resolution fluorine-19 NMR spectra showing five resonances, in agreement with the five tryptophan residues expected from the DNA sequence. The five 19F resonances in the spectra have been assigned to the specific tryptophan residues in the primary sequence of D-lactate dehydrogenase by site-directed oligonucleotide mutagenesis of the cloned gene. We observe large differences in the relative fluorine-19 chemical shifts of each tryptophan residue when labeled by different isomers of fluorotryptophan. We have determined by NMR methods that two tryptophans are exposed to the solvent and that none of the tryptophan residues are within 10 A of the lipid phase. On the basis of 19F NMR spectroscopy of the labeled tryptophan residues, the conformation of D-lactate dehydrogenase is similar in aqueous solution and in the presence of a variety of lipids and detergents. This result indicates that the presence of lipids or detergents is not required to maintain the tertiary structure of this membrane-bound enzyme. In contrast, Triton X-100 induces a change to an abnormal conformation of the enzyme as judged from both NMR spectroscopy and the effect of temperature on the maximal velocity of the enzyme in the presence of this detergent.
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434
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Chen P, Chiu C, Chiou T, Tzeng C, Ho C, Lin S, Hsieh R, Yeh H, Chiang BN. Production of three monoclonal antibodies--A01, B05, and C11--against B-cell leukemia. HAEMATOLOGY AND BLOOD TRANSFUSION 1987; 31:126-31. [PMID: 3502106 DOI: 10.1007/978-3-642-72624-8_27] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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435
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Cottam PF, He NB, Hui SW, Ho C. Biochemical and morphological properties of membranes of unsaturated fatty acid auxotrophs of Salmonella typhimurium: effects of fluorinated myristic acids. BIOCHIMICA ET BIOPHYSICA ACTA 1986; 862:413-28. [PMID: 3535893 DOI: 10.1016/0005-2736(86)90245-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
In order to investigate the utility of the fluorine-19 nucleus as a spectroscopic probe, a fluorinated analog of myristic acid has been incorporated into the membrane lipids of an unsaturated fatty acid auxotroph of Salmonella typhimurium. It is capable of supporting limited growth at temperatures above 37 degrees C. Freeze-fracture electron microscopic examinations of the membrane ultrastructure show a temperature and fatty acid supplement-dependent segregation of intramembranous protein particles into distinct patches in the auxotrophic membrane leaving intramembranous protein-denuded areas. The occurrence of these patches seems to be related to the phase separation of membrane lipids. Corresponding changes in the transport and accumulation of methyl thio-beta-D-galactopyranoside and tetracycline are observed. However, transport of histidine does not appear to be dependent on the physical state of the membrane lipids. The auxotroph shows differences in growth and morphological characteristics from those of the wild type. Functions of both inner and outer membranes are shown to be affected as a response to the fatty acid chain composition of the lipids.
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436
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Ching CB, Ho C, Ruthven DM. An improved adsorption process for the production of high-fructose syrup. AIChE J 1986. [DOI: 10.1002/aic.690321113] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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437
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Russu IM, Ho C. Assessment of role of beta 146-histidyl and other histidyl residues in the Bohr effect of human normal adult hemoglobin. Biochemistry 1986; 25:1706-16. [PMID: 3707904 DOI: 10.1021/bi00355a040] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The contribution of the carboxyl-terminal histidines of the beta chains, beta 146(HC3), to the alkaline Bohr effect of human normal adult hemoglobin has been shown by this laboratory to depend upon the solvent composition. Using high-resolution proton nuclear magnetic resonance spectroscopy, we have found that the pKa value of the beta 146-histidine is 8.0 in the deoxy form, while in the carbonmonoxy form it ranges from 7.1 to 7.85 depending upon the concentration of inorganic phosphate and chloride ions present. These conclusions have been questioned by Perutz and co-workers on the basis of biochemical, structural, and proton nuclear magnetic resonance studies of mutant and enzymatically or chemically modified hemoglobins [Perutz, M. F., Kilmartin, J. V., Nishikura, K., Fogg, J. H., Butler, P. J., & Rollema, H. S. (1980) J. Mol. Biol. 138, 649-670; Kilmartin, J. V., Fogg, J. H., & Perutz, M. F. (1980) Biochemistry 19, 3189-3193; Perutz, M. F., Gronenborn, A. M., Clore, G. M., Fogg, J. H., & Shih, D. T.-b. (1985) J. Mol. Biol. 183, 491-498]. In this work, we use proton nuclear magnetic resonance spectroscopy to assess the effects of structural modifications on the histidyl residues and on the overall conformation of the hemoglobin molecule in solution. The structural perturbations investigated all occur within the tertiary domains around the carboxyl-terminal region of the beta chain as follows: Hb Cowtown (beta 146His----Leu); Hb Wood (beta 97His----Leu); Hb Malmö (beta 97His----Gln); Hb Abruzzo (beta 143His----Arg). Our results demonstrate that the conformational effects of single-site structural modifications upon the conformation and dynamics of hemoglobin depend strongly on their location in the three-dimensional structure of the protein molecule and also on their chemical nature. Furthermore, in normal hemoglobin, the spectral properties of several surface histidyl residues are found to depend, in the ligated state, upon the nature of the ligand. Our present findings do not support the recent spectral assignments proposed by Perutz et al. (1985) for the proton resonances of the beta 146- and beta 97-histidines and their suggestion that the enzymatic removal of the carboxyl-terminal beta 146-histidyl residues induces a conformational equilibrium for the beta 97-histidines in the des-beta 146His hemoglobin molecule in the carbonmonoxy form.
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438
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Russu IM, Lin AK, Yang CP, Ho C. Molecular basis for the anti-sickling activity of aromatic amino acids and related compounds: a proton nuclear magnetic resonance investigation. Biochemistry 1986; 25:808-15. [PMID: 3964645 DOI: 10.1021/bi00352a012] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
High-resolution proton nuclear magnetic resonance spectroscopy and relaxation techniques have been used to investigate the interactions of sickle cell hemoglobin (Hb S) and human normal adult hemoglobin (Hb A) with p-bromobenzyl alcohol, L-phenylalanine, L-tryptophan, and L-valine. With the exception of valine, all these compounds inhibit the polymerization of deoxy-Hb S [Noguchi, C. T., & Schechter, A. N. (1978) Biochemistry 17, 5455)). Using transferred nuclear Overhauser effects among the proton resonances of the compound of interest and the corresponding longitudinal relaxation rates (T1(-1], we have shown that the binding of each of the compounds investigated to deoxy-Hb S is comparable to that to deoxy-Hb A. Intermolecular transferred nuclear Overhauser effects have been observed between proton resonances of the anti-sickling compounds and specific protons situated in the heme pockets of Hb. On the basis of these results, we suggest that one binding site, common to all compounds with anti-sickling activity, is at or near the heme pockets in the alpha and beta chains of both deoxy-HB S and deoxy-Hb A. The proton T1(-1) values of the histidyl residues situated over the surface of the hemoglobin molecule indicate that a second binding site is located at or near the beta 6 position, containing the mutation in Hb S (beta 6Glu----Val). The binding of the compounds investigated to the latter site induces conformational changes in the amino-terminal domains of the beta chains.(ABSTRACT TRUNCATED AT 250 WORDS)
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439
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Wu WG, Dowd SR, Simplaceanu V, Peng ZY, Ho C. 19F NMR investigation of molecular motion and packing in sonicated phospholipid vesicles. Biochemistry 1985; 24:7153-61. [PMID: 4084571 DOI: 10.1021/bi00346a020] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Dimyristoylphosphatidylcholine (DMPC) labeled with a C19F2 group in the 4-, 8-, or 12-position of the 2-acyl chain has been investigated in sonicated unilamellar vesicles (SUV) by fluorine-19 nuclear magnetic resonance (NMR) at 282.4 MHz from 26 to 42 degrees C. The 19F NMR spectra exhibit two overlapping resonances with different line widths. Spin-lattice relaxation time measurements have been performed in both the laboratory frame (T1) and the rotating frame (T1 rho) in order to investigate the packing and dynamics of phospholipids in lipid bilayers. Quantitative line-shape and relaxation analyses are possible by using the experimental chemical shift anisotropy (delta nu CSA) and the internuclear F-F vector order parameter (SFF) values obtained from the 19F powder spectra of multilamellar liposomes. The following conclusions can be made: The 19F chemical shift difference between the inside and outside leaflets of SUV can be used to monitor the lateral packing of the phospholipid in the two SUV monolayers. The hydrocarbon chains in the outer layer are found to be more tightly packed than those of the inner one, and the differences between them become smaller near the chain terminals. The effective correlation time [(1-4) x 10(-7) s] obtained from either the motional narrowing of the line widths or off-resonance T1 rho measurements is shorter than that estimated from the Stokes-Einstein diffusion model (10(-6) s), on the basis of a hydrodynamic radius of 110 A for SUV.(ABSTRACT TRUNCATED AT 250 WORDS)
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440
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Ho C, Jasin M, Schimmel P. Amino acid replacements that compensate for a large polypeptide deletion in an enzyme. Science 1985; 229:389-93. [PMID: 3892692 DOI: 10.1126/science.3892692] [Citation(s) in RCA: 31] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Deletion of more than 400 amino acids from the carboxyl terminus of an enzyme causes a severe reduction in catalytic activity. Selected point mutations within the residual protein partially reverse the effects of the missing segment. The selection can yield mutants with activities at least ten times as high as those of the starting polypeptides. One well-characterized mutation, a single amino acid replacement in the residual polypeptide, increases the catalytic activity of the polypeptide by a factor of 5. The results suggest substantial potential for design of protein elements to compensate for missing polypeptide sequences. They also may reflect that progenitors of large aminoacyl-tRNA (transfer RNA) synthetases--one of which was used in these studies--were themselves much smaller.
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441
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Dalvit C, Ho C. Proton nuclear Overhauser effect investigation of the heme pockets in ligated hemoglobin: conformational differences between oxy and carbonmonoxy forms. Biochemistry 1985; 24:3398-407. [PMID: 4041419 DOI: 10.1021/bi00335a003] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Proton nuclear Overhauser effect (NOE) measurements have been used extensively to investigate the detailed conformations of peptides, proteins, and nucleic acids in the solution state. However, much of the published work has dealth with molecules of molecular weight less than 15 000. It is generally thought that specific NOEs cannot be observed in larger molecules (due to spin diffusion), so that NOE is of little use in conformational studies of such systems. By use of truncated-driven NOE with an irradiation time of 100 ms, specific NOEs are observed in a protein of the size of human normal adult hemoglobin (Hb A, 65 000 daltons). This technique has permitted us to assign several proton proton resonances arising from heme groups and from amino acid residues situated in the vicinity of the ligand binding site (such as E7 histidine and E11 valine) of the alpha and beta chains of Hb A. In addition, two-dimensional 1H[1H] J-correlated spectroscopy (COSY) experiments as well as theoretical ring-current calculations have confirmed the spectral assignments obtained by the one-dimensional NOE experiments. These new results not only have permitted us to map the heme pockets and to investigate the conformational differences in the heme pockets between oxy and carbonmonoxy forms of Hb A but also have demonstrated that the technique of truncated-driven NOE can be used to investigate the detailed conformations of selected regions in larger macromolecules in a way heretofore thought not to be feasible.
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442
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Rule GS, Pratt EA, Chin CC, Wold F, Ho C. Overproduction and nucleotide sequence of the respiratory D-lactate dehydrogenase of Escherichia coli. J Bacteriol 1985; 161:1059-68. [PMID: 3882663 PMCID: PMC215007 DOI: 10.1128/jb.161.3.1059-1068.1985] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
Recombinant DNA plasmids containing the gene for the membrane-bound D-lactate dehydrogenase (D-LDH) of Escherichia coli linked to the promoter PL from lambda were constructed. After induction, the levels of D-LDH were elevated 300-fold over that of the wild type and amounted to 35% of the total cellular protein. The nucleotide sequence of the D-LDH gene was determined and shown to agree with the amino acid composition and the amino-terminal sequence of the purified enzyme. Removal of the amino-terminal formyl-Met from D-LDH was not inhibited in cells which contained these high levels of D-LDH.
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443
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Post JF, Cook BW, Dowd SR, Lowe IJ, Ho C. Fluorine-19 nuclear magnetic resonance investigation of fluorine-19-labeled phospholipids. 1. A multiple-pulse study. Biochemistry 1984; 23:6138-41. [PMID: 6525352 DOI: 10.1021/bi00320a037] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
A multiple-pulse nuclear magnetic resonance technique has been used to measure the order parameter, SFF, at 40 MHz for dimyristoylphosphatidylcholine labeled with a difluoromethylene group at the 4-, 8-, or 12-position of the sn-2-acyl chain dispersed in water in the liquid-crystalline phase. The Carr-Purcell-Meiboom-Gill multiple-pulse sequence can resolve the homonuclear dipolar coupling between the two fluorine nuclei, thus making a direct determination of the order parameter, SFF, for the F-F internuclear vector possible. Other interactions, such as the 19F chemical shift anisotropy, heteronuclear dipolar couplings, and field inhomogeneity, which normally obscure the dipolar splitting, are effectively canceled. The order parameters obtained in this work compare well with those obtained by 19F nuclear magnetic resonance line-shape analysis of the 19F-labeled phospholipids reported in the following paper [Dowd, S. R., Simplaceanu, V., & Ho, C. (1984) Biochemistry (following paper in this issue)] as well as comparable SCD order parameters, determined for the deuterium-carbon internuclear vector of deuterium-labeled phospholipids [Oldfield, E., Meadows, M., Rice, D., & Jacobs, R. (1978) Biochemistry 17, 2727-2740]. The present results clearly show the usefulness of using nuclear magnetic resonance spectroscopy to investigate lipid-lipid and protein-lipid interactions, especially for those systems containing a difluoromethylene group in the acyl chain of a phospholipid molecule.
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444
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Dowd SR, Simplaceanu V, Ho C. Fluorine-19 nuclear magnetic resonance investigation of fluorine-19-labeled phospholipids. 2. A line-shape analysis. Biochemistry 1984; 23:6142-6. [PMID: 6525353 DOI: 10.1021/bi00320a038] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Fluorine-19 nuclear magnetic resonance spectra at 282.4 MHz of dimyristoylphosphatidylcholine specifically labeled with a difluoromethylene group at the 4-, 8-, or 12-position of the sn-2-acyl chain and dispersed in excess water show the characteristic powder-pattern line shapes associated with an anisotropic axially symmetric chemical shift tensor, altered by the presence of the homonuclear dipolar interaction of the fluorine nuclei and of heteronuclear dipolar interactions between fluorine and nearby protons. Values for the anisotropy of the fluorine-19 chemical shift and for the fluorine-fluorine internuclear vector order parameter, SFF, as a function of temperature have been determined for the phospholipid dispersions with and without cholesterol. An increased mobility is evidenced in both cases as the temperature is raised. For the phospholipid dispersions in water, the values of SFF parallel quite well the behavior of the carbon-deuterium internuclear vector order parameter, SCD, as determined by deuterium nuclear magnetic resonance spectroscopy for the same labeled position. The effect of adding cholesterol is seen as a restriction of the chain mobility and the eventual disappearance of the phase transition. These new experiments provide a value of 166 ppm for the anisotropy of the axially symmetric chemical shift tensor of a difluoromethylene group in a phospholipid acyl chain. They also demonstrate the feasibility as well as the advantages of using a difluoromethylene group as a probe for molecular motions in the phospholipid bilayers.
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445
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Post JF, Cottam PF, Simplaceanu V, Ho C. Fluorine-19 nuclear magnetic resonance study of 5-fluorotryptophan-labeled histidine-binding protein J of Salmonella typhimurium. J Mol Biol 1984; 179:729-43. [PMID: 6389886 DOI: 10.1016/0022-2836(84)90164-5] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Fluorine-19 nuclear magnetic resonance has been used to investigate the histidine-binding protein J from Salmonella typhimurium. The protein has been labeled with fluorine-19 by growing the bacterial cells of a tryptophan auxotroph in the presence of 5-fluorotryptophan. Incorporation of up to 70% was achieved. The binding of L-histidine to the 19F-labeled protein is not affected by the isotopic labeling. The protein contains one tryptophan residue, giving rise to a single 19F resonance. Upon binding L-histidine to 19F-labeled histidine-binding protein J, the observed 19F resonance is shifted downfield by about 0.6 parts per million, indicating a conformational change of the protein molecule and a more hydrophobic environment for the 19F nucleus. Additional fluorescence experiments confirm that the tryptophan residue is located inside the hydrophobic core of the protein. 19F spin-lattice relaxation times of the 19F-labeled protein as a function of temperature show no difference between the free protein and the protein-histidine complex. However, the linewidth for the free protein is much larger than that of the protein-substrate complex. This can be explained by slow fluctuations between different conformations of the free protein molecule having slightly different 19F chemical shifts. Both with and without the substrate, the tryptophan residue is immobile inside the protein molecule as shown by the total disappearance of the 19F signal upon broadband irradiation at the 1H frequency. Also, the 19F spin-lattice relaxation times indicate that the protein is a rather rigid structure, in which rapid motions of the tryptophan residue on the time scale of 10(-8) second are not prominent.
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446
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Dalvit C, Miura S, de Young A, Noble RW, Cerdonio M, Ho C. A high-resolution proton nuclear-magnetic-resonance investigation of carp hemoglobin. Conformational differences between carp and human normal adult hemoglobins in solution. EUROPEAN JOURNAL OF BIOCHEMISTRY 1984; 141:255-9. [PMID: 6329750 DOI: 10.1111/j.1432-1033.1984.tb08185.x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The high-resolution proton nuclear magnetic resonance spectra of carp hemoglobin have been compared to those of human normal adult hemoglobin. Carp deoxy and carbonmonoxy hemoglobins in the deoxy-type quaternary state exhibit two downfield exchangeable proton resonances as compared to four seen in human normal adult deoxyhemoglobin. This suggests that two of the hydrogen bonds present in human normal adult deoxyhemoglobin are absent or occur in very different environments in carp hemoglobin. One of the exchangeable proton resonances of carp hemoglobin, while present in the deoxy-type quaternary state of the carbonmonoxy and deoxy derivatives, is absent in the oxy-type quaternary state of both, in agreement with the assignments of these quaternary structures by other methods. The ring-current-shifted proton resonances (sensitive tertiary structural markers) of carp carbonmonoxyhemoglobin are substantially different from those of human normal adult hemoglobin. The aromatic proton resonance region of carp hemoglobin has fewer resonances than that of human normal adult hemoglobin, consistent with its much reduced histidine content. The hyperfine-shifted proximal histidyl NH-exchangeable proton resonances of carp hemoglobin suggest that during the transition from the oxy to the deoxy quaternary structure, there is a greater alteration in the heme pocket of one type of subunits (presumably the beta chain) than that in the other subunit. The present results suggest that there are differences in both tertiary and quaternary structures between carp and human normal adult hemoglobins which could contribute to the great differences in the functional properties between these two proteins.
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447
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Cedel TE, Cottam PF, Meadows MD, Ho C. A high-resolution 1H-NMR investigation of the histidine-binding protein J of Salmonella typhimurium. Substrate-induced conformational changes. Biophys Chem 1984; 19:279-87. [PMID: 6378263 DOI: 10.1016/0301-4622(84)87011-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
High-resolution 1H-NMR spectroscopy at 600 MHz has been used to investigate the conformational transitions of the histidine-binding protein J of Salmonella typhimurium in solution as a function of pH and of L-histidine concentration. The dissociation constant for the binding of L-histidine to histidine-binding protein J increases from 6.0 X 10(-8) to 5.1 X 10(-7) M in going from pH 5.57 to 8.00. The conformation of this protein as observed by 1H-NMR also changes over this range of pH. However, when L-histidine is bound, the changes in conformation with pH are much smaller. Also, the pK for the single histidyl residue in histidine-binding protein J changes from 6.75 in the absence of L-histidine to 6.52 when L-histidine is bound. Earlier work in this laboratory resulted in the identification of several proton resonances believed to be at or near the L-histidine-binding site. Two of these resonances have been assigned to a tyrosine and the single histidyl residue in the histidine-binding protein J molecule.
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Miura S, Ho C. Proton nuclear magnetic resonance investigation of cross-linked asymmetrically modified hemoglobins: influence of the salt bridges on tertiary and quaternary structures of hemoglobin. Biochemistry 1984; 23:2492-9. [PMID: 6477880 DOI: 10.1021/bi00306a027] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Asymmetrically modified hemoglobins, [alpha(des-Arg)beta]A[alpha beta]cXL, [alpha(des-Arg-Tyr)beta]A[alpha beta]cXL, [alpha(des-Arg)beta(NES)]A[alpha beta]cXL, and [alpha(des-Arg)beta]A[alpha beta(NES)]cXL, have been prepared from chemically modified human normal adult hemoglobin (Hb A) and mutant hemoglobin C (beta 6Glu----Lys), where the subscript A or C denotes that the alpha beta dimer is from either Hb A or Hb C, respectively, and XL symbolizes a cross-linked hemoglobin prepared by reaction with a bifunctional cross-linking reagent, bis(3,5-dibromosalicyl) fumarate. It has been shown by X-ray crystallography that this bifunctional reagent cross-links the epsilon-amino group of the lysyl residue at position 82 of the two beta chains [Walder, J. A., Walder, R. Y., & Arnone, A. (1980) J. Mol. Biol. 141, 195]. Proton nuclear magnetic resonance spectra of these asymmetrically modified hemoglobins together with their parent hemoglobins, des-Arg(alpha 141) Hb A, des-Arg(alpha 141)-Tyr(alpha 140) Hb A, NES-Hb A and NES-des-Arg(alpha 141) Hb A, have been obtained over the spectral region 5-10 ppm downfield from H2O for the exchangeable proton resonances and 50-80 ppm downfield from H2O for the hyperfine-shifted proximal histidyl N delta H exchangeable proton resonances. The experimental results indicate that the effects on the hyperfine-shifted proximal histidyl N delta H exchangeable proton resonances at pH 6.0 of removing Arg(alpha 141) or Arg(alpha 141)-Tyr(alpha 140) from one of the two alpha subunits are limited to within the alpha subunit from which the carboxyl-terminal amino acids are specifically removed.(ABSTRACT TRUNCATED AT 250 WORDS)
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Russu IM, Lin AK, Ferro-Dosch S, Ho C. A proton nuclear magnetic resonance investigation of human hemoglobin A2. Implications on the intermolecular contacts in sickle hemoglobin fibers and on the Bohr effect of human normal adult hemoglobin. BIOCHIMICA ET BIOPHYSICA ACTA 1984; 785:123-31. [PMID: 6704402 DOI: 10.1016/0167-4838(84)90136-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
High-resolution proton nuclear magnetic resonance spectroscopy at 300 and 600 MHz has been used to investigate the conformation of a minor hemoglobin component of human blood, hemoglobin A2 (alpha 2 delta 2), in solution. We have found that (i) the replacement of the beta chains by the delta chains in hemoglobin A2 conserves the alpha 1 delta 2 interface but slightly perturbs the alpha 1 delta 1 interface, and (ii) one surface histidine residue in the deoxy form and one in the carbonmonoxy form of hemoglobin A2 have local conformations and/or electrostatic environments which are different from the corresponding ones in human normal adult hemoglobin. By comparing the proton nuclear magnetic resonance titration of individual histidine residues in hemoglobin A2 and in human normal adult hemoglobin, we can conclude that in human normal adult hemoglobin, both beta 116 and beta 117 histidine residues are titratable in both the deoxy and the carbonmonoxy forms. Thus, these two histidine residues can contribute to the Bohr effect of human normal adult hemoglobin. The present nuclear magnetic resonance data on hemoglobin A2 and those previously obtained in our laboratory on sickle hemoglobin suggest that the antisickling property of hemoglobin A2 does not originate from an alteration of the intermolecular contact site at the beta 6 position, but involves additional amino-acid residues which are different in the beta and delta chains. We have found that the replacement of the beta 116 and beta 117 histidine residues in the delta chains does not play a significant role in the antisickling effect of hemoglobin A2 and, thus, these amino-acid residues do not participate in the intermolecular interactions responsible for the polymerization of sickle hemoglobin.
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Hunt AG, Simplaceanu V, Hong JS, Ho C. Phosphorus-31 nuclear magnetic resonance investigation of membrane vesicles from Escherichia coli. Biochemistry 1983; 22:6130-4. [PMID: 6318807 DOI: 10.1021/bi00295a014] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Phosphorus-31 nuclear magnetic resonance studies of isolated membrane vesicles prepared from Escherichia coli PSM116 as described by Hunt and Hong [Hunt, A. G., & Hong, J.-S. (1981) J. Biol. Chem. 256, 11988-11991; Hunt, A. G., & Hong, J.-S. (1983) Biochemistry 22, 844-850] are detailed here. This strain harbored a recombinant plasmid containing the phosphoglycerate transport system from Salmonella typhimurium (pJH7). Evidence indicating a surprising metabolic diversity, such as the presence of the enzymes enolase and phosphoglycerate mutase, is presented. The nature of the energization of these membrane vesicles for transport as described by Hugenholtz et al. [Hugenholtz, J., Hong, J.-S., & Kaback, H. R. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 3446-3449] is also discussed. Membrane vesicles prepared from the PSM116 strain do not form a transmembrane pH gradient when phosphoenolpyruvate is added. The present results show that phosphorus-31 nuclear magnetic resonance spectroscopy is an excellent tool to investigate the metabolism of membrane vesicles.
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