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Edwards HGM, Ali EMA. Raman spectroscopy of archaeological and ancient resins: problems with database construction for applications in conservation and historical provenancing. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:49-54. [PMID: 21782495 DOI: 10.1016/j.saa.2011.01.030] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2010] [Revised: 01/11/2011] [Accepted: 01/23/2011] [Indexed: 05/31/2023]
Abstract
The adoption of Raman spectroscopy as a screening technique for the presence of organic resins on diverse substrates is now being advocated for the first pass non-destructive examination of potential sites for limited sampling using other analytical techniques. The characterisation of ancient resins in art work and specimens recovered from archaeological excavations is critically dependent upon the analytical capability of Raman spectroscopy using different wavelengths of excitation from the visible to the near infrared and the interpretation of the data illustrates the advantages and limitations of the technique. Resin specimens from art works and artefacts span a period of about 7000 years of recorded history and the influence of factors such as the environmental degradation, burial deposition, reaction with associated substrates and mineral pigments on the observed Raman spectra have been assessed. The key molecular Raman spectral features that are definitive for the discrimination between contemporary resins are considered in respect of these factors and thereby illustrative of the difficulties posed for the creation of a Raman spectral database of ancient resins, in contrast with the extensive and definitive literature equivalents that are available for their mineral pigment and organic dye analogues.
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Affiliation(s)
- Howell G M Edwards
- Division of Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, UK.
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Jehlička J, Culka A, Vandenabeele P, Edwards HGM. Critical evaluation of a handheld Raman spectrometer with near infrared (785nm) excitation for field identification of minerals. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:36-40. [PMID: 21292545 DOI: 10.1016/j.saa.2011.01.005] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2010] [Revised: 01/03/2011] [Accepted: 01/06/2011] [Indexed: 05/26/2023]
Abstract
Handheld Raman spectrometers (Ahura First Defender XL, Inspector Raman DeltaNu) permit the recording of acceptable and good quality spectra of a large majority of minerals outdoors and on outcrops. Raman spectra of minerals in the current study were obtained using instruments equipped with 785 nm diode lasers. Repetitive measurements carried out under an identical instrumental setup confirmed the reliability of the tested Raman spectrometers. Raman bands are found at correct wavenumber positions within ±3 cm(-1) compared to reference values in the literature. Taking into account several limitations such as the spatial resolution and problems with metallic and black and green minerals handheld Raman spectrometers equipped with 785 nm diode lasers can be applied successfully for the detection of minerals from the majority of classes of the mineralogical system. For the detection of biomarkers and biomolecules using Raman spectroscopy, e.g. for exobiological applications, the near infrared excitation can be considered as a preferred excitation. Areas of potential applications of the actual instruments include all kind of common geoscience work outdoors. Modified Raman systems can be proposed for studies of superficial or subsurface targets for Mars or Lunar investigations.
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Affiliation(s)
- Jan Jehlička
- Charles University in Prague, Institute of Geochemistry, Mineralogy, Mineral Resources, Prague, Czech Republic.
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Edwards HGM. Analytical Raman spectroscopic discrimination between yellow pigments of the Renaissance. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:14-20. [PMID: 21296610 DOI: 10.1016/j.saa.2010.12.023] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2010] [Accepted: 12/09/2010] [Indexed: 05/30/2023]
Abstract
The Renaissance represented a major advance in painting techniques, subject matter, artistic style and the use of pigments and pigment mixtures. However, most pigments in general use were still mineral-based as most organic dyes were believed to be fugitive; the historical study of artists' palettes and recipes has assumed importance for the attribution of art works to the Renaissance period. Although the application of diagnostic elemental and molecular spectroscopic techniques play vital and complementary roles in the analysis of art works, elemental techniques alone cannot definitively provide the data needed for pigment identification. The advantages and limitations of Raman spectroscopy for the definitive diagnostic characterisation of yellow pigments that were in use during the Renaissance is demonstrated here in consideration of heavy metal oxides and sulphides; these data will be compared with those obtained from analyses of synthetic yellow pigments that were available during the eighteenth and nineteenth Centuries which could have been used in unrecorded restorations of Renaissance paintings.
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Affiliation(s)
- Howell G M Edwards
- University Analytical Centre, Chemical & Forensic Sciences, University of Bradford, Bradford, West Yorkshire, UK.
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Culka A, Jehlička J, Vandenabeele P, Edwards HGM. The detection of biomarkers in evaporite matrices using a portable Raman instrument under Alpine conditions. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:8-13. [PMID: 21237702 DOI: 10.1016/j.saa.2010.12.020] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2010] [Revised: 11/22/2010] [Accepted: 12/08/2010] [Indexed: 05/30/2023]
Abstract
The detection of relatively low concentrations of the biomarkers in experimentally prepared evaporitic matrices using a portable Raman instrument (Ahura First Defender XL equipped with a 785 nm diode laser and fixed frontal probe) under Alpine conditions was tested. The instrument was able to detect nucleobases thymine (1673 and 984 cm(-1)) and adenine (722 and 536 cm(-1)) at concentrations of 1 wt% in the gypsum matrix outdoors at a low ambient temperature of -10°C and at an altitude of 2860 m(Pitztal, Austria). Amino acids glycine (1324 and 892 cm(-1)) and alanine (1357 and 851 cm(-1)) were unambiguously detected at 10 wt%. The main Raman features: strong, medium and partially weak intensity bands were observed in good agreement with the reference spectra for individual compounds (with a spectral resolution 7-10 cm(-1)) in the wavenumber range 200-1800 cm(-1). In the qualitative part of the experiment it was established that the portable instrument is able to detect the components in the mixture of three biomarkers (glycine, alanine and mellitic acid) and two evaporitic minerals unambiguously. It also detected the majority of the six similar amino acids in the mixture with gypsum and epsomite evaporitic minerals. The results obtained here demonstrate the possibility of a miniaturised Raman spectrometer to be able to cope with the various exobiologically related tasks that can be expected in the future planetary surface exploration missions. Within the payload designed by ESA and NASA for future missions, Raman spectroscopy will represent a unique research instrument.
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Affiliation(s)
- A Culka
- Charles University in Prague, Institute of Geochemistry, Mineralogy and Mineral Resources, Prague, Czech Republic.
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55
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Ali EMA, Edwards HGM, Scowen IJ. Rapid in situ detection of street samples of drugs of abuse on textile substrates using microRaman spectroscopy. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:2-7. [PMID: 21144797 DOI: 10.1016/j.saa.2010.11.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2010] [Accepted: 11/10/2010] [Indexed: 05/30/2023]
Abstract
Trace amounts of street samples of cocaine hydrochloride and N-methyl-3,4-methylenedioxy-amphetamine (MDMA) on natural and synthetic textiles were successfully detected in situ using confocal Raman microscopy. The presence of some excipient bands in the spectra of the drugs did not prevent the unambiguous identification of the drugs. Raman spectra of the drugs were readily obtained without significant interference from the fibre substrates. Interfering bands arising from the fibre natural or synthetic polymer structure and/or dye molecules did not overlap with the characteristic Raman bands of the drugs. If needed, interfering bands could be successfully removed by spectral subtraction. Also, Raman spectra could be acquired from drug particles trapped between the fibres of highly fluorescent textile specimens. The total acquisition time of the spectra of the drug particles was 90 s accomplished non-destructively and without detachment from their substrates. Sample preparation was not required and spectra of the drugs could be obtained non-invasively preserving the integrity of the evidential material for further analysis.
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Affiliation(s)
- Esam M A Ali
- Division of Chemical and Forensic Sciences, University of Bradford, Bradford, UK.
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Vítek P, Edwards HGM, Jehlička J, Cox R. Evaluation of portable Raman instrumentation for identification of β-carotene and mellitic acid in two-component mixtures with halite. Spectrochim Acta A Mol Biomol Spectrosc 2011; 80:32-35. [PMID: 21296611 DOI: 10.1016/j.saa.2011.01.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2010] [Revised: 12/17/2010] [Accepted: 01/06/2011] [Indexed: 05/30/2023]
Abstract
Recently, portable Raman instrumentation has been in demand for geosciences and for future planetary exploration for the identification of both organic and inorganic compounds in situ on Earth and on other planetary bodies, especially on Mars. Here we present the results of the analysis of halite/β-carotene and halite/mellitic acid mixtures, performed by miniaturized Raman instrumentation equipped with 785 and 1064 nm excitation. Various proportions of organics in the halite matrix were examined. The lowest concentration of β-carotene detected using the 785 nm laser was 1 mg kg(-1), with slightly better signals observed with shorter exposure times compared with the bench instrument using the same excitation wavelength. Mellitic acid was identified at the concentration level 10 g kg(-1). The 1064 nm excitation provided a lower sensitivity towards low concentration when compared with the 785 nm excitation.
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Affiliation(s)
- P Vítek
- Institute of Geochemistry, Mineralogy and Mineral Resources, Charles University in Prague, Prague, Czech Republic.
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Jorge-Villar SE, Edwards HGM, Benning LG. Raman spectroscopic analysis of arctic nodules: relevance to the astrobiological exploration of Mars. Anal Bioanal Chem 2011; 401:2927-33. [DOI: 10.1007/s00216-011-5385-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2011] [Revised: 08/31/2011] [Accepted: 08/31/2011] [Indexed: 10/17/2022]
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de Oliveira VE, Almeida EWC, Castro HV, Edwards HGM, Dos Santos HF, de Oliveira LFC. Carotenoids and β-cyclodextrin inclusion complexes: Raman spectroscopy and theoretical investigation. J Phys Chem A 2011; 115:8511-9. [PMID: 21728366 DOI: 10.1021/jp2028142] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In the present study, the inclusion processes of β-carotene, astaxanthin, lycopene, and norbixin (NOR) into the β-cyclodextrin (β-CD) cavity were investigated by means of Raman spectroscopy and quantum mechanics calculations. The Raman ν(1) band assigned to C═C stretching was sensitive to the host-guest interaction and in general undergoes a blue shift (3-13 cm(-1)) after inclusion takes place, which is the consequence of the localization of single and double bonds. This is supported by the molecular modeling prediction, which inclusion complexes show the ν(1) band blue shifted by 1-8 cm(-1). The calculated complexation energies was small for most of derivatives and was found to be -11.1 kcal mol(-1) for inclusion of AST and +0.27 kcal mol(-1) for NOR. The stability order was qualitatively correlated to topological parameters accounting for the opening angle of the chain. This means that after inclusion the guest molecules assume a slightly more extended conformation, which enhances the host-guest contact, improving the interaction energy. The results discussed here clearly demonstrate the matrix effect on the carotenes' spectroscopic profile and should contribute to fully characterize the raw samples.
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Affiliation(s)
- Vanessa E de Oliveira
- NEEM - Núcleo de Espectroscopia e Estrutura Molecular, Departamento de Química, Universidade Federal de Juiz de Fora, Juiz de Fora, MG, 36036-900, Brazil
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Edwards HGM, Herschy B, Page K, Munshi T, Scowen IJ. Raman spectra of biomarkers of relevance to analytical astrobiological exploration: hopanoids, sterols and steranes. Spectrochim Acta A Mol Biomol Spectrosc 2011; 78:191-195. [PMID: 21050806 DOI: 10.1016/j.saa.2010.09.020] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2010] [Accepted: 09/13/2010] [Indexed: 05/30/2023]
Abstract
The aim of this work is to investigate the viability and potential of three groups of organic compounds as biomarkers in a future robotic analytical exploration of Mars. The three compounds have been identified as suitable candidates for potential biomarkers for extant or extinct life from the terrestrial fossil record. The three groups of compound were all similar in structure, being either tetra- or penta-cyclic compounds. The limits of detection for a sample were also tested to estimate what concentrations it would still be amenable to Raman spectroscopic investigation. This was investigated using both solid mixtures and liquid solutions. The spectra of these compounds are characterised so that they can be added to the Raman database for future Mars missions. This involved identifying functional group characteristics, assigning peaks for each individual sample and characteristic features which would categorise the samples.
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Affiliation(s)
- H G M Edwards
- Division of Chemical and Forensic Sciences, University Analytical Centre, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK
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Culka A, Jehlička J, Edwards HGM. Acquisition of Raman spectra of amino acids using portable instruments: outdoor measurements and comparison. Spectrochim Acta A Mol Biomol Spectrosc 2010; 77:978-983. [PMID: 20863748 DOI: 10.1016/j.saa.2010.08.034] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2010] [Revised: 07/16/2010] [Accepted: 08/19/2010] [Indexed: 05/29/2023]
Abstract
Raman spectra of 13 amino acids: L-alanine, β-alanine, L-asparagine, L-aspartic acid, L-glutamic acid, L-glutamine, glycine, L-methionine, L-proline, L-serine, L-threonine, L-tryptophan and L-tyrosine were acquired outdoors using two portable Raman instruments from the Ahura and Delta Nu manufacturers, both with 785 nm laser excitation. Both instruments provide quality Raman spectra with nevertheless a variable dependence upon the prevailing experimental conditions. The data acquired in these experiments will inform the selection of suitable Raman spectrometers for the in-field detection of biomolecules of relevance to the search for life signatures spectroscopically in terrestrial extreme environments and in extraterrestrial exploration, especially of planetary surfaces and subsurfaces using robotic instrumentation.
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Affiliation(s)
- A Culka
- Charles University in Prague, Institute of Geochemistry, Mineralogy and Mineral Resources, Albertov 6, 128 43 Prague 2, Czech Republic.
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61
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Varnali T, Edwards HGM. Iron-scytonemin complexes: DFT calculations on new UV protectants for terrestrial cyanobacteria and astrobiological implications. Astrobiology 2010; 10:711-716. [PMID: 20879865 DOI: 10.1089/ast.2009.0457] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Cyanobacterial colonies produce the radiation-protectant biomolecule scytonemin as part of their response strategy for survival in environmentally stressed conditions in hot and cold deserts. These colonies frequently use sandstone rocks as host matrices for subsurface colonization, which is accompanied by a zone of depletion of iron and transportation of iron compounds to the mineral surface. It is suggested that an iron-scytonemin complex could feature in this survival strategy and facilitate the movement of iron through the rock. Calculations were carried out on several hypothetical iron-scytonemin complexes to evaluate the most stable structure energetically and examine the effect of the complexation of the biomolecule upon the electronic absorption characteristics of the radiation-protectant species. The implications for extraterrestrial planetary detection and analytical monitoring of an iron-scytonemin complex are assessed.
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Affiliation(s)
- Tereza Varnali
- Bogazici University, Department of Chemistry, Istanbul, Turkey.
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Edwards HGM, Sadooni F, Vítek P, Jehlicka J. Raman spectroscopy of the Dukhan sabkha: identification of geological and biogeological molecules in an extreme environment. Philos Trans A Math Phys Eng Sci 2010; 368:3099-3107. [PMID: 20529947 DOI: 10.1098/rsta.2010.0101] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The characterization of minerals and biogeological deposits in a terrestrial Arabian sabkha has a direct relevance for the exploration of Mars since the discovery by the NASA rovers Spirit and Opportunity of evaporate minerals on Mars that could have arisen from aquifers and subsurface water movement. The recognition of carbonates and sulphates in Gusev Crater has afforded an additional impetus to these studies, as relict or extant microbial extremophilic organisms could have colonized these geological matrices, as has been recorded on Earth. Here, we describe the Raman spectroscopic analysis of specimens of evaporitic materials sampled from the Dukhan sabkha, the largest inland sabkha in the Persian Gulf. With daily temperatures reaching in excess of 60 degrees C and extreme salinity, we have identified the characteristic Raman signatures of key biomolecular compounds in association with evaporitic minerals and geological carbonate and sulphate matrices, which indicate that extremophilic cyanobacterial colonies are existent there. This evidence, the first to be acquired spectroscopically from such a region, establishes a platform for further studies using remote, portable Raman instrumentation that will inform the potential of detection of similar systems on the Martian surface or subsurface in future space missions. A comparison is made between the results from this study and the previous analysis of a gypsum/halite sabkha where the extremophilic molecular signatures were better preserved.
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Affiliation(s)
- Howell G M Edwards
- Centre for Astrobiology and Extremophiles Research, School of Life Sciences, University of Bradford, Bradford, West Yorkshire BD7 1DP, UK.
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63
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Edwards HGM. Raman spectroscopic approach to analytical astrobiology: the detection of key geological and biomolecular markers in the search for life. Philos Trans A Math Phys Eng Sci 2010; 368:3059-3065. [PMID: 20529944 DOI: 10.1098/rsta.2010.0100] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Affiliation(s)
- Howell G M Edwards
- Centre for Astrobiology and Extremophiles Research, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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Jehlicka J, Edwards HGM, Culka A. Using portable Raman spectrometers for the identification of organic compounds at low temperatures and high altitudes: exobiological applications. Philos Trans A Math Phys Eng Sci 2010; 368:3109-3125. [PMID: 20529948 DOI: 10.1098/rsta.2010.0075] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Organic minerals, organic acids and NH-containing organic molecules represent important target molecules for astrobiology. Here, we present the results of the evaluation of a portable hand-held Raman spectrometer to detect these organic compounds outdoors under field conditions. These measurements were carried out during the February-March 2009 winter period in Austrian Alpine sites at temperatures ranging between -5 and -25 degrees C. The compounds investigated were detected under field conditions and their main Raman spectral features were observed unambiguously at their correct reference wavenumber positions. The results obtained demonstrate that a miniaturized Raman spectrometer equipped with 785 nm excitation could be applied with advantage as a key instrument for investigating the presence of organic minerals, organic acids and nitrogen-containing organic compounds outdoors under terrestrial low-temperature conditions. Within the payload designed by ESA and NASA for several missions focusing on Mars, Titan, Europa and other extraterrestrial bodies, Raman spectroscopy can be proposed as an important non-destructive analytical tool for the in situ identification of organic compounds relevant to life detection on planetary and moon surfaces or near subsurfaces.
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Affiliation(s)
- J Jehlicka
- Institute of Geochemistry, Mineralogy and Mineral Resources, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic.
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Vítek P, Edwards HGM, Jehlicka J, Ascaso C, De los Ríos A, Valea S, Jorge-Villar SE, Davila AF, Wierzchos J. Microbial colonization of halite from the hyper-arid Atacama Desert studied by Raman spectroscopy. Philos Trans A Math Phys Eng Sci 2010; 368:3205-21. [PMID: 20529955 DOI: 10.1098/rsta.2010.0059] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
The hyper-arid core of the Atacama Desert (Chile) is the driest place on Earth and is considered a close analogue to the extremely arid conditions on the surface of Mars. Microbial life is very rare in soils of this hyper-arid region, and autotrophic micro-organisms are virtually absent. Instead, photosynthetic micro-organisms have successfully colonized the interior of halite crusts, which are widespread in the Atacama Desert. These endoevaporitic colonies are an example of life that has adapted to the extreme dryness by colonizing the interior of rocks that provide enhanced moisture conditions. As such, these colonies represent a novel example of potential life on Mars. Here, we present non-destructive Raman spectroscopical identification of these colonies and their organic remnants. Spectral signatures revealed the presence of UV-protective biomolecules as well as light-harvesting pigments pointing to photosynthetic activity. Compounds of biogenic origin identified within these rocks differed depending on the origins of specimens from particular areas in the desert, with differing environmental conditions. Our results also demonstrate the capability of Raman spectroscopy to identify biomarkers within rocks that have a strong astrobiological potential.
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Affiliation(s)
- P Vítek
- Institute of Geochemistry, Mineralogy and Mineral Resources, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic.
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Varnali T, Edwards HGM. Ab initio calculations of scytonemin derivatives of relevance to extremophile characterization by Raman spectroscopy. Philos Trans A Math Phys Eng Sci 2010; 368:3193-3203. [PMID: 20529954 DOI: 10.1098/rsta.2010.0019] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The recognition that scytonemin, the radiation protectant pigment produced by extremophilic cyanobacterial colonies in stressed terrestrial environments, is a key biomarker for extinct or extant life preserved in geological scenarios is critically important for the detection of life signatures by remote analytical instrumentation on planetary surfaces and subsurfaces. The ExoMars mission to seek life signatures on Mars is just one experiment that will rely upon the detection of molecules such as scytonemin in the Martian regolith. Following a detailed structural analysis of the parent scytonemin, we report here for the first time a similar analysis of several of its methoxy derivatives that have recently been extracted from stressed cyanobacteria. Ab initio calculations have been carried out to determine the most stable molecular configurations, and the implications of the structural changes imposed by the methoxy group additions on the spectral characteristics of the parent molecule are discussed. The calculated electronic absorption bands of the derivative molecules reveal that their capability of removing UVA wavelengths is removed while preserving the ability to absorb the shorter wavelength UVB and UVC radiation, in contrast to scytonemin itself. This is indicative of a special role for these molecules in the protective strategy of the cyanobacterial extremophiles.
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Affiliation(s)
- Tereza Varnali
- Department of Chemistry, Faculty of Arts and Sciences, Bogazici University, Bebek 34342, Istanbul, Turkey.
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Abstract
A Raman microspectroscopic study of several fulgurites has been undertaken. A fulgurite is an amorphous mineraloid, a superheated glassy solid that is formed when a lightning bolt hits a sandy or rocky ground and thermal energy is transferred. The Raman spectra revealed several forms of crystalline and fused silica and also the presence of polyaromatic hydrocarbons found in an interfacial zone of a glass bubble. This, together with the presence of anatase, a low-temperature polymorph of TiO(2), suggested that some regions of the fulgurite specimen were not subjected to temperatures of 1800 degrees C, which are attained when lightning hits the surface of sand or a rock.
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Affiliation(s)
- Elizabeth A Carter
- Vibrational Spectroscopy Facility, School of Chemistry, The University of Sydney, New South Wales 2006, Australia.
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Jorge-Villar SE, Edwards HGM. Raman spectroscopy of volcanic lavas and inclusions of relevance to astrobiological exploration. Philos Trans A Math Phys Eng Sci 2010; 368:3127-3135. [PMID: 20529949 DOI: 10.1098/rsta.2010.0102] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Volcanic eruptions and lava flows comprise one of the most highly stressed terrestrial environments for the survival of biological organisms; the destruction of botanical and biological colonies by molten lava, pyroclastic flows, lahars, poisonous gas emissions and the deposition of highly toxic materials from fumaroles is the normal expectation from such events. However, the role of lichens and cyanobacteria in the earlier colonization of volcanic lava outcrops has now been recognized. In this paper, we build upon earlier Raman spectroscopic studies on extremophilic colonies in old lava flows to assess the potential of finding evidence of biological colonization in more recent lava deposits that would inform, first, the new colonization of these rocks and also provide evidence for the relict presence of biological colonies that existed before the volcanism occurred and were engulfed by the lava. In this research, samples were collected from a recent expedition to the active volcano at Kilauea, Hawaii, which comprises very recent lava flows, active fumaroles and volcanic rocks that had broken through to the ocean and had engulfed a coral reef. The Raman spectra indicated that biological and geobiological signatures could be identified in the presence of geological matrices, which is encouraging for the planned exploration of Mars, where it is believed that there is evidence of an active volcanism that perhaps could have preserved traces of biological activity that once existed on the planet's surface, especially in sites near the old Martian oceans.
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Affiliation(s)
- Susana E Jorge-Villar
- Area Geodinamica Interna, Facultad de Humanidades y Educacion, Universidad de Burgos, Calle Villadiego s/n, 09001 Burgos, Spain.
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Jehlička J, Vandenabeele P, Edwards HGM, Culka A, Čapoun T. Raman spectra of pure biomolecules obtained using a handheld instrument under cold high-altitude conditions. Anal Bioanal Chem 2010; 397:2753-60. [DOI: 10.1007/s00216-010-3849-7] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2010] [Revised: 05/11/2010] [Accepted: 05/13/2010] [Indexed: 11/24/2022]
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Alajtal AI, Edwards HGM, Elbagerma MA, Scowen IJ. The effect of laser wavelength on the Raman Spectra of phenanthrene, chrysene, and tetracene: implications for extra-terrestrial detection of polyaromatic hydrocarbons. Spectrochim Acta A Mol Biomol Spectrosc 2010; 76:1-5. [PMID: 20308013 DOI: 10.1016/j.saa.2010.01.009] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2009] [Revised: 01/25/2010] [Accepted: 01/27/2010] [Indexed: 05/29/2023]
Abstract
Raman spectroscopy, with visible laser (514 and 633 nm) and near infrared (785 and 1064 nm) excitation, has been used to obtain high quality spectra of phenanthrene, chrysene, and tetracene. Samples with dimensions from a minimum size of 10 microm have been analyzed utilizing a Raman microprobe fitted with a charge-coupled device (CCD) array detector and a FT-Raman instrument. Fluorescence is observed for samples using visible 514, 633 and near infrared 785 nm excitation but most of the samples can be measured with a near infrared 1064 nm Nd:YAG laser.
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Affiliation(s)
- A I Alajtal
- Centre for Astrobiology & Extremophiles Research, School of Life Sciences, University of Bradford, Bradford, UK.
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71
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Elbagerma MA, Azimi G, Edwards HGM, Alajtal AI, Scowen IJ. In situ monitoring of pH titration by Raman spectroscopy. Spectrochim Acta A Mol Biomol Spectrosc 2010; 75:1403-1410. [PMID: 20299276 DOI: 10.1016/j.saa.2010.01.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2009] [Revised: 01/24/2010] [Accepted: 01/27/2010] [Indexed: 05/29/2023]
Abstract
Molecular speciation of organic compounds in solution is essential for the understanding of ionic complexation. The Raman technique was chosen because it allows the identification of compounds in different states, and it can give information about the molecular geometry from the analysis of the vibrational spectra. The effect of pH on organic compounds can give information about the ionisation of molecule species. In this study the ionisation steps of salicylic acid and paracetamol have been studied by means of potentiometry coupled with Raman spectroscopy at 30.0 degrees C in a solution of ionic strength 0.96moldm(-3) (KNO(3)) and 0.04moldm(-3) (HNO(3)). The protonation and deprotonation behaviour of the molecules were studied in different pH regions. The abundance of the three different species in the Raman spectra of aqueous salicylic acid have been identified satisfactorily, characterised, and determined by numeric treatment of the data using a multiwavelength curve-fitting program and confirmed with the observed spectral information.
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Affiliation(s)
- M A Elbagerma
- Raman Spectroscopy Group, University Analytical Centre, Division of Chemical and Forensic Sciences, University of Bradford, West Yorkshire BD7 1DP, UK
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72
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Abstract
Investigating carbonaceous microstructures and material in Earth's oldest sedimentary rocks is an essential part of tracing the origins of life on our planet; furthermore, it is important for developing techniques to search for traces of life on other planets, for example, Mars. NASA and ESA are considering the adoption of miniaturized Raman spectrometers for inclusion in suites of analytical instrumentation to be placed on robotic landers on Mars in the near future to search for fossil or extant biomolecules. Recently, Raman spectroscopy has been used to infer a biological origin of putative carbonaceous microfossils in Early Archean rocks. However, it has been demonstrated that the spectral signature obtained from kerogen (of known biological origin) is similar to spectra obtained from many poorly ordered carbonaceous materials that arise through abiotic processes. Yet there is still confusion in the literature as to whether the Raman spectroscopy of carbonaceous materials can indeed delineate a signature of ancient life. Despite the similar nature in spectra, rigorous structural interrogation between the thermal alteration products of biological and nonbiological organic materials has not been undertaken. Therefore, we propose a new way forward by investigating the second derivative, deconvolution, and chemometrics of the carbon first-order spectra to build a database of structural parameters that may yield distinguishable characteristics between biogenic and abiogenic carbonaceous material. To place Raman spectroscopy as a technique to delineate a biological origin for samples in context, we will discuss what is currently accepted as a spectral signature for life; review Raman spectroscopy of carbonaceous material; and provide a historical overview of Raman spectroscopy applied to Archean carbonaceous materials, interpretations of the origin of the ancient carbonaceous material, and a future way forward for Raman spectroscopy.
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Affiliation(s)
- Craig P Marshall
- Department of Geology, The University of Kansas, Lawrence, KS 66045, USA.
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73
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Burnett AD, Kendrick J, Cunningham JE, Hargreaves MD, Munshi T, Edwards HGM, Linfield EH, Davies AG. Calculation and Measurement of Terahertz Active Normal Modes in Crystalline PETN. Chemphyschem 2010; 11:368-78. [DOI: 10.1002/cphc.200900548] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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74
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Petrou M, Edwards HGM, Janaway RC, Thompson GB, Wilson AS. Fourier-transform Raman spectroscopic study of a Neolithic waterlogged wood assemblage. Anal Bioanal Chem 2009; 395:2131-8. [PMID: 19834692 DOI: 10.1007/s00216-009-3178-x] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2009] [Revised: 09/15/2009] [Accepted: 09/21/2009] [Indexed: 11/26/2022]
Abstract
The use of Fourier-transform Raman spectroscopy for characterising lignocellulosics has increased significantly over the last twenty years. Here, an FT-Raman spectroscopic study of changes in the chemistry of waterlogged archaeological wood of Pinus sp. and Quercus sp. from a prehistoric assemblage recovered from northern Greece is presented. FT-Raman spectral features of biodeteriorated wood were associated with the depletion of lignin and/or carbohydrate polymers at various stages of deterioration. Spectra from the archaeological wood are presented alongside spectra of sound wood of the same taxa. A comparison of the relative changes in intensities of spectral bands associated with lignin and carbohydrates resulting from decay clearly indicated extensive deterioration of both the softwood and hardwood samples and the carbohydrates appear to be more deteriorated than the lignin. The biodeterioration of the archaeological timbers followed a pattern of initial preferential loss of carbohydrates causing significant loss of cellulose and hemicellulose, followed by the degradation of lignin.
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Affiliation(s)
- M Petrou
- Hellenic Ministry of Culture, Directorate of Conservation of Ancient and Modern Monuments, Dept. of Applied Research, Peiraiws 81, Athens 10553, Greece.
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75
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Edwards HGM, Stern B, Burgio L, Kite M. Analysis of yellow "fat" deposits on Inuit boots. Spectrochim Acta A Mol Biomol Spectrosc 2009; 73:561-565. [PMID: 19070539 DOI: 10.1016/j.saa.2008.10.038] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2008] [Revised: 10/22/2008] [Accepted: 10/23/2008] [Indexed: 05/27/2023]
Abstract
Irregular residues of a yellow deposit that was assumed to be seal fat used for waterproofing were observed in the creases of the outer surface of a pair of Inuit boots from Arctic Canada. A sample of this deposit detached from one of these areas on these boots was examined initially by FT-Raman microscopy, from which interesting and rather surprising results demanded further analysis using FT-IR and GC-MS. The non-destructive Raman spectroscopic analysis yielded spectra which indicated the presence of a tree resin from the Pinaceae sp. The Raman spectra were also characteristic of a well-preserved keratotic protein and indicative of adherent skin. Subsequent FT-IR spectroscopic analysis supported the attribution of a Pinaceae resin to the yellow deposit. GC-MS analysis of the same deposits identified the presence of pimaric, sandaracopimaric, dehydroabietic and abietic acids, all indicative of an aged Pinaceae resin. These results confirmed that the Inuit people had access to tree resins which they probably used as a waterproofing agent.
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Affiliation(s)
- Howell G M Edwards
- Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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76
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Jehlicka J, Vítek P, Edwards HGM, Heagraves M, Capoun T. Application of portable Raman instruments for fast and non-destructive detection of minerals on outcrops. Spectrochim Acta A Mol Biomol Spectrosc 2009; 73:410-419. [PMID: 18993111 DOI: 10.1016/j.saa.2008.09.004] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2008] [Revised: 09/10/2008] [Accepted: 09/11/2008] [Indexed: 05/27/2023]
Abstract
Raman spectral signatures have been obtained in situ for a series of minerals using portable Raman instruments. Cerussite, anglesite, wulfenite, titanite, calcite, tremolite, andradite and quartz were detected using portable Raman spectrometer First Defender XL (Ahura). Baryte, almandine and realgar Raman spectra obtained by this instrument in the field were compared to the data measured by the other mobile Raman instrument Inspector Raman (DeltaNu). Bench Raman dispersive microspectrometer (InVia Reflex, Renishaw) was used for comparative purposes. All spectra were obtained using a 785nm diode excitation. Although displaying lower spectral resolution comparing with the laboratory confocal instrument both portable instruments permit unambiguous detection of minerals in the field. These possibilities designate portable Raman machines as excellent tools for field geological applications. Miniaturised Raman instrument combined with LIBS will be included in the payload of the EXO Mars mission and would open interesting research possibilities in other in situ field planetary studies.
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Affiliation(s)
- J Jehlicka
- Charles University, Institute of Geochemistry, Mineralogy and Mineral Resources, Prague, Czech Republic.
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77
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Edwards HGM, Middleton PS, Hargreaves MD. Romano-British wall paintings: Raman spectroscopic analysis of fragments from two urban sites of early military colonisation. Spectrochim Acta A Mol Biomol Spectrosc 2009; 73:553-560. [PMID: 19070538 DOI: 10.1016/j.saa.2008.10.027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2008] [Revised: 09/24/2008] [Accepted: 10/23/2008] [Indexed: 05/27/2023]
Abstract
Raman spectroscopic analyses of 1st century AD Romano-British villa wall-painting fragments from two important military and early urban centres at Colchester and Lincoln have demonstrated some interesting contrasts in technique and palette usage. Colchester, the earliest fortified settlement, developed a sophisticated painting and craft industry compared with Lincoln in the assimilation of novel substrate preparation ideas and pigment adoption. The earliest use of the rather rare purple mineral pigment, caput mortuum, hitherto reported in only a few Roman villas elsewhere in mainland Europe, is in evidence in this early phase settlement and the use of gypsum as a special ground preparation agent as an additive to the more common limewash putty to enhance the effect of the use of lazurite as a pigment is worthy of note in this context. Otherwise, the pigments are seen to be those that are quite normally encountered in Roman villas, namely, haematite, goethite, terre verte, and carbon. The results of this study indicate that at Colchester there was a continued development in technique into the colonial phase compared with a stagnation in Lincoln; these scientific results have created a stimulus for further historical research into pigment and techniques development for wall paintings at the fringe of the Roman Empire in the 1st-3rd Centuries AD.
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Affiliation(s)
- H G M Edwards
- Division of Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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78
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Abdel-Ghani M, Edwards HGM, Stern B, Janaway R. Characterization of paint and varnish on a medieval Coptic-Byzantine icon: novel usage of dammar resin. Spectrochim Acta A Mol Biomol Spectrosc 2009; 73:566-575. [PMID: 19195925 DOI: 10.1016/j.saa.2008.10.050] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2008] [Revised: 10/22/2008] [Accepted: 10/23/2008] [Indexed: 05/27/2023]
Abstract
A comprehensive study has been undertaken into a 13th century Coptic-Byzantine icon from the St. Mercurius Church, St. Mercurius monastery, Old Cairo, Egypt. The layered structure, pigment composition and varnish identification were revealed by means of optical and Raman microscopy and gas chromatography-mass spectrometry (GC-MS). The structure of the icon comprised six layers; wooden panel, canvas, white ground, two bole layers and a single paint layer. Azurite (2CuCO(3) x Cu(OH)(2)), cinnabar (mercuric (II) sulfide alpha-HgS), yellow ochre (Fe(2)O(3) x H(2)O), hydromagnesite Mg(5)(CO(3))(4)(OH)(2) x 4 H(2)O and lamp black (carbon, C) are the pigments identified in the icon. The green paint area is of interest as it is applied neither with a green pigment nor with a mixture of a blue and yellow pigment. Instead, a yellow layer of dammar resin was applied on top of blue azurite to obtain the green colour. Pinaceae sp. resin mixed with drying oil was used as a protective varnish.
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Affiliation(s)
- M Abdel-Ghani
- Department of Conservation, Faculty of Archaeology, Cairo University, Giza, Egypt.
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79
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Ali HRH, Edwards HGM, Kendrick J, Scowen IJ. Vibrational spectroscopic study of terbutaline hemisulphate. Spectrochim Acta A Mol Biomol Spectrosc 2009; 72:715-719. [PMID: 19124270 DOI: 10.1016/j.saa.2008.11.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2008] [Accepted: 11/08/2008] [Indexed: 05/27/2023]
Abstract
The Raman spectrum of terbutaline hemisulphate is reported for the first time, and molecular assignments are proposed on the basis of ab initio BLYP DFT calculations with a 6-31G* basis set and vibrational frequencies predicted within the quasi-harmonic approximation; these predictions compare favourably with the observed vibrational spectra. Comparison with previously published infrared data explains several spectral features. The results from this study provide data that can be used for the preparative process monitoring of terbutaline hemisulphate, an important beta(2) agonist drug in various dosage forms and its interaction with excipients and other components.
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Affiliation(s)
- H R H Ali
- Chemical & Forensic Sciences/University Analytical Centre, University of Bradford, UK
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80
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Ali HRH, Edwards HGM, Scowen IJ. Noninvasive in situ identification and band assignments of some pharmaceutical excipients inside USP vials with FT-near-infrared spectroscopy. Spectrochim Acta A Mol Biomol Spectrosc 2009; 72:890-896. [PMID: 19153058 DOI: 10.1016/j.saa.2008.12.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2008] [Accepted: 12/09/2008] [Indexed: 05/27/2023]
Abstract
For the manufacture of dosage forms all ingredients must be reliably identified. In this paper, the suitability of FT-NIR spectroscopy to identify potassium sorbate, sodium starch glycollate, calcium ascorbate, calcium carbonate, candelilla wax, maltosextrin, monohydrated and anhydrous lactose inside USP vials was investigated. Differentiation between the anhydrous and monohydrated forms of lactose was found to be possible by studying the regions of the near-infrared spectrum corresponding to the combination and first overtone stretching frequencies of water. The results show unequivocally the potential of FT-NIR spectroscopy for rapid, in situ and non-destructive identification of pharmaceutical excipients.
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Affiliation(s)
- Hassan Refat H Ali
- Chemical & Forensic Sciences/University Analytical Centre, University of Bradford, UK
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81
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Ali HRH, Edwards HGM, Kendrick J, Scowen IJ. Vibrational spectroscopic study of fluticasone propionate. Spectrochim Acta A Mol Biomol Spectrosc 2009; 72:244-247. [PMID: 19095495 DOI: 10.1016/j.saa.2008.08.004] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2008] [Accepted: 08/13/2008] [Indexed: 05/27/2023]
Abstract
Fluticasone propionate is a synthetic glucocorticoid with potent anti-inflammatory activity that has been used effectively in the treatment of chronic asthma. The present work reports a vibrational spectroscopic study of fluticasone propionate and gives proposed molecular assignments on the basis of ab initio calculations using BLYP density functional theory with a 6-31G* basis set and vibrational frequencies predicted within the quasi-harmonic approximation. Several spectral features and band intensities are explained. This study generated a library of information that can be employed to aid the process monitoring of fluticasone propionate.
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Affiliation(s)
- H R H Ali
- School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
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82
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Abstract
In this study, ipratropium bromide is investigated using vibrational spectroscopy and quantum chemical calculations. The structure of ipratropium bromide was optimised using density functional theory calculations and the geometry optimisation has been carried out on two conformations with and without intramolecular hydrogen bonding. Infrared and Raman spectra were calculated from the optimised structures. Many modes in the calculated spectra could be matched with the experimental spectra and a description of the modes is given. By analysis of the theoretical vibrational modes, it is shown that ipratropium bromide specimens are likely to be a mixture of the two conformations with and without intramolecular hydrogen bonding. In addition, several spectral features and band intensities in the CH and OH stretching regions are explained. Quantum mechanical calculations allowed improved understanding of ipratropium bromide and its vibrational spectra.
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Affiliation(s)
- H R H Ali
- Molecular Spectroscopy Group, Analytical Centre and Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
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83
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Brewster VL, Edwards HGM, Hargreaves MD, Munshi T. Identification of the date-rape drug GHB and its precursor GBL by Raman spectroscopy. Drug Test Anal 2009; 1:25-31. [DOI: 10.1002/dta.11] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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84
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Burnett AD, Fan W, Upadhya PC, Cunningham JE, Hargreaves MD, Munshi T, Edwards HGM, Linfield EH, Davies AG. Broadband terahertz time-domain spectroscopy of drugs-of-abuse and the use of principal component analysis. Analyst 2009; 134:1658-68. [DOI: 10.1039/b817839a] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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85
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86
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Ali HRH, Edwards HGM, Hargreaves MD, Munshi T, Scowen IJ, Telford RJ. Vibrational spectroscopic characterisation of salmeterol xinafoate polymorphs and a preliminary investigation of their transformation using simultaneous in situ portable Raman spectroscopy and differential scanning calorimetry. Anal Chim Acta 2008; 620:103-12. [PMID: 18558130 DOI: 10.1016/j.aca.2008.05.009] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2008] [Revised: 05/02/2008] [Accepted: 05/03/2008] [Indexed: 11/18/2022]
Abstract
Knowledge and control of the polymorphic phases of chemical compounds are important aspects of drug development in the pharmaceutical industry. Salmeterol xinafoate, a long acting beta-adrenergic receptor agonist, exists in two polymorphic Forms, I and II. Raman and near infrared spectra were obtained of these polymorphs at selected wavelengths in the range of 488-1064 nm; significant differences in the Raman and near-infrared spectra were apparent and key spectral marker bands have been identified for the vibrational spectroscopic characterisation of the individual polymorphs which were also characterised with X ray diffractometry. The solid-state transition of salmeterol xinafoate polymorphs was studied using simultaneous in situ portable Raman spectroscopy and differential scanning calorimetry isothermally between transitions. This method assisted in the unambiguous characterisation of the two polymorphic forms by providing a simultaneous probe of both the thermal and vibrational data. The study demonstrates the value of a rapid in situ analysis of a drug polymorph which can be of potential value for at-line in-process control.
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Affiliation(s)
- Hassan Refat H Ali
- Chemical & Forensic Sciences, University Analytical Centre, School of Life Sciences, University of Bradford, Richmond Road, Bradford BD7 1DP, UK
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87
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Doménech A, Doménech-Carbó MT, Edwards HGM. Quantitation from Tafel Analysis in Solid-State Voltammetry. Application to the Study of Cobalt and Copper Pigments in Severely Damaged Frescoes. Anal Chem 2008; 80:2704-16. [DOI: 10.1021/ac7024333] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Antonio Doménech
- Departament de Química Analítica. Universitat de València. Dr. Moliner, 50, 46100 Burjassot, València, Spain, Institut de Restauració del Patrimoni, Universitat Politècnica de València. Camí de Vera s/n. 46022 València, Spain, and University Analytical Centre, Chemical & Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
| | - María Teresa Doménech-Carbó
- Departament de Química Analítica. Universitat de València. Dr. Moliner, 50, 46100 Burjassot, València, Spain, Institut de Restauració del Patrimoni, Universitat Politècnica de València. Camí de Vera s/n. 46022 València, Spain, and University Analytical Centre, Chemical & Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
| | - Howell G. M. Edwards
- Departament de Química Analítica. Universitat de València. Dr. Moliner, 50, 46100 Burjassot, València, Spain, Institut de Restauració del Patrimoni, Universitat Politècnica de València. Camí de Vera s/n. 46022 València, Spain, and University Analytical Centre, Chemical & Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
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88
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Pullan D, Westall F, Hofmann BA, Parnell J, Cockell CS, Edwards HGM, Villar SEJ, Schröder C, Cressey G, Marinangeli L, Richter L, Klingelhöfer G. Identification of morphological biosignatures in Martian analogue field specimens using in situ planetary instrumentation. Astrobiology 2008; 8:119-156. [PMID: 18211229 DOI: 10.1089/ast.2006.0037] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
We have investigated how morphological biosignatures (i.e., features related to life) might be identified with an array of viable instruments within the framework of robotic planetary surface operations at Mars. This is the first time such an integrated lab-based study has been conducted that incorporates space-qualified instrumentation designed for combined in situ imaging, analysis, and geotechnics (sampling). Specimens were selected on the basis of feature morphology, scale, and analogy to Mars rocks. Two types of morphological criteria were considered: potential signatures of extinct life (fossilized microbial filaments) and of extant life (crypto-chasmoendolithic microorganisms). The materials originated from a variety of topical martian analogue localities on Earth, including impact craters, high-latitude deserts, and hydrothermal deposits. Our in situ payload included a stereo camera, microscope, Mössbauer spectrometer, and sampling device (all space-qualified units from Beagle 2), and an array of commercial instruments, including a multi-spectral imager, an X-ray spectrometer (calibrated to the Beagle 2 instrument), a micro-Raman spectrometer, and a bespoke (custom-designed) X-ray diffractometer. All experiments were conducted within the engineering constraints of in situ operations to generate realistic data and address the practical challenges of measurement. Our results demonstrate the importance of an integrated approach for this type of work. Each technique made a proportionate contribution to the overall effectiveness of our "pseudopayload" for biogenic assessment of samples yet highlighted a number of limitations of current space instrument technology for in situ astrobiology.
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Affiliation(s)
- Derek Pullan
- Space Research Centre, Department of Physics and Astronomy, University of Leicester, Leicester, UK.
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89
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Edwards HGM. A novel extremophile strategy studied by Raman spectroscopy. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1126-32. [PMID: 17267270 DOI: 10.1016/j.saa.2006.11.029] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2006] [Accepted: 11/16/2006] [Indexed: 05/13/2023]
Abstract
A case is made for the classification of the colonisation by Dirina massiliensis forma sorediata of pigments on ancient wall-paintings as extremophilic behaviour. The lichen encrustations studied using FT-Raman spectroscopy have yielded important molecular information which has assisted in the identification of the survival strategy of the organism in the presence of significant levels of heavy metal toxins. The production of a carotenoid, probably astaxanthin, at the surface of the lichen thalli is identified from its characteristic biomolecular signatures in the Raman spectrum, whereas the presence of calcium oxalate dihydrate (weddellite) has been identified at both the upper and lower surfaces of the thalli and in core samples taken from depths of up to 10mm through the encrustation into the rock substrate. The latter observation explains the significant disintegrative biodeteriorative effect of the colonisation upon the integrity of the wall-paintings and can be used to direct conservatorial and preservation efforts of the art work. A surprising result proved to be the absence of Raman spectroscopic evidence for the complexation of the metal pigments by the oxalic acid produced by the metabolic action of the organisms, unlike several cases that have been reported in the literature.
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Affiliation(s)
- Howell G M Edwards
- Chemical & Forensic Sciences, University Analytical Centre, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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90
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Jehlicka J, Edwards HGM, Villar SEJ. Raman spectroscopy of natural accumulated paraffins from rocks: evenkite, ozokerite and hatchetine. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1143-8. [PMID: 17353144 DOI: 10.1016/j.saa.2007.01.017] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2006] [Revised: 01/18/2007] [Accepted: 01/22/2007] [Indexed: 05/14/2023]
Abstract
Raman spectra were obtained from the natural crystalline (evenkite) and amorphous (ozokerite and hatchetin) hydrocarbons, originating from volcanic and sedimentary rocks from several sites (Merník, Evenki, Zastávka). Raman spectra of all materials investigated confirm their exclusively aliphatic character. Vibrational assignments are proposed and compared with pure synthetic compounds and the differences in Raman spectra obtained from materials from different sites are discussed. Monoclinic evenkite corresponds to n-tetratracosane (C(24)H(50)). Noncrystalline waxy ozokerite and hatchetine contain several degradation products in addition to higher paraffins.
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Affiliation(s)
- Jan Jehlicka
- Charles University, Institute of Geochemistry, Mineralogy and Mineral Resources, Albertov 6, 12843 Prague 2, Czech Republic.
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91
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Edwards HGM, Vandenabeele P, Jorge-Villar SE, Carter EA, Perez FR, Hargreaves MD. The Rio Tinto Mars analogue site: an extremophilic Raman spectroscopic study. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1133-7. [PMID: 17600759 DOI: 10.1016/j.saa.2006.12.080] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2006] [Revised: 12/13/2006] [Accepted: 12/14/2006] [Indexed: 05/08/2023]
Abstract
The Rio Tinto site is recognised as a terrestrial Mars analogue because of the presence of jarosite and related sulfates which have recently been identified by the NASA Mars Exploration Rover "Opportunity" in the El Capitan region of Meridiani Planum on Mars. It has long been known that acidophilic microbial action is responsible for the deep blood-red colour of the water in Rio Tinto, where the pH varies from about 1.5 to 3.0 and the water is rich in iron and sulfur. Following recent Raman spectroscopic characterisation of the mineral phases of the Rio Tinto system, we report here a study of the biological components found in several specimens of deposited minerals and near the waterside that were collected during a GeoRaman VI Conference organized field trip in 2006. Key biosignatures were found for carotenoids, scytonemin and mycosporine-like amino acids, which are indicative of the biological colonisation of exposed mineral substrates; information from this study will be useful for targeting Martian sites using a miniaturized Raman instrument where the biosignatures of relict or extant life could remain in the geological record.
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Affiliation(s)
- Howell G M Edwards
- Centre for Astrobiology and Extremophile Research, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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92
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Edwards HGM, Farwell DW, Villar SEJ. Raman microspectroscopic studies of amber resins with insect inclusions. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1089-95. [PMID: 17320468 DOI: 10.1016/j.saa.2006.11.037] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2006] [Revised: 11/22/2006] [Accepted: 11/24/2006] [Indexed: 05/14/2023]
Abstract
Raman microscope spectra of specimens of Baltic and Mexican amber resins containing insect inclusions have been analysed using near-infrared excitation to assess the potential for discrimination between the keratotic remains of the insects and the terpenoid matrix. For the Mexican amber specimen the insect spectra exhibit evidence of significant protein degradation compared with the insect remains in the Baltic amber specimen. In both cases the Raman spectra of the insect remains are still distinguishable from the amber resins. Despite its better preservation, however, no spectra could be obtained from the inside of the larger insect preserved in the Baltic amber in agreement with the observation that most insect inclusions in amber are hollow. It is noted that the Mexican amber insect is located adjacent to a large gas bubble in the amber matrix, to which the observed degradation of the insect and its poor state of preservation are attributed. It is concluded that Raman spectra of insect inclusions can provide useful information about the chemical composition of the remains and that confocal microscopy is particularly advantageous in this respect.
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Affiliation(s)
- Howell G M Edwards
- Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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93
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Frank O, Jehlicka J, Edwards HGM. Raman spectroscopy as tool for the characterization of thio-polyaromatic hydrocarbons in organic minerals. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1065-9. [PMID: 17307383 DOI: 10.1016/j.saa.2006.12.033] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2006] [Revised: 12/15/2006] [Accepted: 12/17/2006] [Indexed: 05/14/2023]
Abstract
Benzothiophene and dibenzothiophene have been studied by Raman microspectroscopy using a 785 nm excitation wavelength. The spectra obtained have been compared with the previously measured spectra of idrialite, a complex natural mineral composed entirely of cata-condensed polyaromatic hydrocarbons (PAHs), usually containing a thiophenic or aliphatic five-membered ring. For comparison, the Raman spectra of 2,3-benzofluorene crystals have been obtained for the first time. Some of the bands in the idrialite spectra are attributed to specific vibrational modes of thiophene or fluorene-type PAHs, especially in the region below 1000 cm(-1). These modes at 495, 705 and 750 cm(-1) along with C-H or C-H(2) stretching modes around 3000 cm(-1) can be then used to distinguish such groups of PAHs in complicated organic mineral mixtures like idrialite.
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Affiliation(s)
- Otakar Frank
- Institute of Geochemistry, Mineralogy and Mineral Resources, Faculty of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic.
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94
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Jehlicka J, Zácek V, Edwards HGM, Shcherbakova E, Moroz T. Raman spectra of organic compounds kladnoite (C6H4(CO)2NH) and hoelite (C14H8O2)--rare sublimation products crystallising on self-ignited coal heaps. Spectrochim Acta A Mol Biomol Spectrosc 2007; 68:1053-7. [PMID: 17398143 DOI: 10.1016/j.saa.2007.02.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2006] [Revised: 02/12/2007] [Accepted: 02/13/2007] [Indexed: 05/14/2023]
Abstract
As minerals, aromatic compounds occur very rarely in nature. Not more than 10 of such minerals are known and most of them were described in the coal deposits where they were formed as a result of coal bed fires or burning of coal waste heaps. Raman spectra of kladnoite C(6)H(4)(CO)(2)NH (natural phthalimide) and hoelite C(14)H(8)O(2), (natural 9,10-anthraquinone) display complex features. Raman microspectroscopy help to detect these phases non-destructively directly in the frame of rare samples. Investigated minerals are transformation products formed from gaseous phase originating in natural pyrolytical process occurring in the frame of coal heaps and coal series outcrops. It is recommended to include Raman spectroscopic characteristics of similar materials in databases for exobiological studies.
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Affiliation(s)
- J Jehlicka
- Charles University in Prague, Institute of Geochemistry, Mineralogy and Mineral Resources, Prague, Czech Republic.
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95
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da Silva CE, Garcia HC, Diniz R, Spezialli NL, Yoshida MI, Edwards HGM, de Oliveira LFC. New insight on the investigation of the role of water in the solid-state structures of potassium croconate, K(2)C(5)O(5).2H(2)O, and its anhydrate. J Phys Chem A 2007; 111:11990-5. [PMID: 17967000 DOI: 10.1021/jp076181+] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
This work presents a comparative study of dihydrated and anhydrous forms of potassium croconate crystals by vibrational spectroscopy, X-ray powder diffraction, and thermogravimetry. These compounds have different colors (dihydrated is orange, and dehydrated is yellow) due to the presence of coordinated water molecules. X-ray diffraction patterns show that the unit cell of the yellow compound is smaller than that of the orange analogue, suggesting that the croconate ion layers are more closely bonded in this salt. The loss of water is reversible due to the potassium cation size which is intermediate between small (Li+ and Na+) and large (Rb+ and Cs+) alkaline metal ions. However, the hydrated compound (orange) is more stable, and with a small quantity of water the yellow compound is quickly converted to the orange compound. A diagnostic feature of the Raman spectrum for the orange (hydrated) and yellow (anhydrous) analogues is the singlet at 1240 cm(-1) in the former, assigned to a nu(CC) + delta(CCC) + nu(CO) + beta(CO) mode of E'2 symmetry, which splits in the yellow form to a doublet at 1256 and 1232 cm(-1).
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Affiliation(s)
- Carlos E da Silva
- Núcleo de Espectroscopia e Estrutura Molecular, Departamento de Química, Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil
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96
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Edwards HGM. Question 2: Raman spectroscopic approach to analytical astrobiology: the detection of key biomolecular markers in the search for life. ORIGINS LIFE EVOL B 2007; 37:335-9. [PMID: 17592755 DOI: 10.1007/s11084-007-9079-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2006] [Accepted: 04/17/2007] [Indexed: 11/30/2022]
Abstract
The recognition of extinct or extant life signatures in the terrestrial geological record is fundamentally dependent upon the understanding of both the structural morphology and chemical composition of relict biomaterials; the identification of cyanobacterial colonies that have adapted biogeologically their mineral matrices in early evolutionary processes is a fundamental step in the acquisition of analytical data from remote planetary probes designed for life-detection experiments, particularly on Mars and on the planetary satellite moons, Europa and Titan. A key factor in the assessment of early life signatures is the molecular presence of chemicals designed to protect the emerging organisms from the damaging effect of radiation exposure and of desiccation and temperature changes; in this respect the non-destructive capability of Raman spectroscopy to delineate the interfacial interactions between substrates and endolithic biology is now deemed an essential part of the ExoMars life-detection suite of instrumentation planned by the European Space Agency in the AURORA programme. A description of the scientific basis for the biogeological discrimination offered by Raman spectroscopy between organic and inorganic moieties in specimens from terrestrial Mars analogue sites is followed by selected examples of the type of analytical information provided, which will be complementary to the elementary and microscopic data obtained from other instrumentation on the same mission.
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Affiliation(s)
- Howell G M Edwards
- Centre for Astrobiology and Extremophiles Research, University Analytical Centre, Chemical & Forensic Sciences, School of Life Sciences, University of Bradford, Bradford BD7 1DP, UK.
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97
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Edwards HGM, Munshi T, Page K. Analytical discrimination between sources of ginseng using Raman spectroscopy. Anal Bioanal Chem 2007; 389:2203-15. [PMID: 17882405 DOI: 10.1007/s00216-007-1605-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2007] [Revised: 08/31/2007] [Accepted: 09/04/2007] [Indexed: 10/22/2022]
Abstract
Ginseng is a widely used medicinal product that grows mainly in Korea, China and America. American ginseng is classified as an endangered species, and so the import and export of this type of ginseng is illegal in certain countries. Due to this restriction it is becoming increasingly important to be able to distinguish between different types of ginseng. FT-Raman spectroscopy has the ability to discriminate between ginseng specimens according to the country of origin and the effects of processing on the ginseng material. The ginsenoside content of ginseng differs in both conformation and concentration depending on the source of the ginseng, which means that ginseng grown in different countries should express unique spectral features. The presence or absence of these features, therefore, could indicate the geographical origin of the sample. Several spectral features were identified for a range of ginsengs, such as a peak at 980 cm(-1) that was only found in Chinese ginseng, and the different wavenumber positions of characteristic ginseng bands near 1600 cm(-1). This indicates that Raman spectroscopy can be used to pinpoint the origin of an unknown ginseng sample and that it would provide a rapid nondestructive analytical technique for formally discriminating between restricted and permitted imports.
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Affiliation(s)
- H G M Edwards
- Division of Chemical and Forensic Sciences, University Analytical Centre, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK
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98
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Clifford P, Bowen RD, Edwards HGM, Farwell DW. Differentiation of isomeric allylic alkenyl methyl ethers by Raman spectroscopy. Anal Chim Acta 2007; 598:268-79. [PMID: 17719902 DOI: 10.1016/j.aca.2007.07.042] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2007] [Revised: 07/12/2007] [Accepted: 07/13/2007] [Indexed: 10/23/2022]
Abstract
The Raman spectra of several pairs of alkenyl methyl ethers of general structure R(1)R(2)C=CR(5)C(R(3)R(4))OCH3 and R(1)R(2)C(OCH3)C(R(5))=CR(3)R(4) (R(1), R(2), R(3), R(4), R(5) = H or C(n)H(2n+1), n = 1-3) are reported and discussed, with a view to establishing whether Raman spectroscopy offers a viable means of distinguishing between these isomeric unsaturated species. Key bands associated with the nu(sp2C-H) and nu(C=C) stretching modes are found to be particularly useful in this connection: R(1)R(2)C=CHCH2OCH3 and R(1)R(2)C(OCH3)CH=CH2 ethers (R(1), R(2) = CH3, C2H5) are easily distinguished on this basis. Differentiation of their lower homologues, R(1)CH=CHCH2OCH3 and R(1)CH(OCH3)CH=CH2 (R(1) = CH3, C2H5, C3H7), by similar means is also quite straightforward, even in cases where cis and trans isomers are possible. Pairs of isomeric ethers, such as CH3CH=C(CH3)CH2OCH3 and CH3CH(OCH3)C(CH3)=CH2, in which the structural differences are more subtle, may also be distinguished with care. Deductions based on bands ascribed to the stretching vibrations are usually confirmed by consideration of the signals associated with the corresponding delta(sp2C-H) deformation vibrations. Even C2H5CH=CHCH(C3H7)OCH3 and C3H7CH=CHCH(C2H5)OCH3 are found to have distinctive Raman spectra, but differentiation of these closely related isomers requires additional consideration of the low wavenumber region.
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Affiliation(s)
- Paul Clifford
- Division of Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, West Yorkshire BD7 1DP, United Kingdom
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99
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Abstract
Vibrational properties (band position, Infrared and Raman intensities) of the acetonitrile C[triple bond]N stretching mode were studied in 27 gas-phase medium intensity (length range: = 1.71-2.05 angstroms; -deltaE range = 13-48 kJ/mol) hydrogen-bonded 1:1 complexes of CH3CN with organic and inorganic acids using density functional theory (DFT) calculations [B3LYP-6-31++G(2d,2p)]. Furthermore, general characteristics of the hydrogen bonds and vibrational changes in the OH stretching band of the acids were also considered. Experimentally observed blue-shifts of the C[triple bond]N stretching band promoted by the hydrogen bonding, which shortens the triple bond length, are very well reproduced and quantitatively depend on the hydrogen bond length. Both predicted enhancement of the infrared and Raman nu(C[triple bond]N) band intensities are in good agreement with the experimental results. Infrared band intensity increase is a direct function of the hydrogen bond energy. However, the predicted increase in the Raman band intensity increase is a more complex function, depending simultaneously on the characteristics of both the hydrogen bond (C[triple bond]N bond length) and the H-donating acid polarizability. Accounting for these two parameters, the calculated nu(C[triple bond]N) Raman intensities of the complexes are explained with a mean error of +/- 2.4%.
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Affiliation(s)
- Jose M Alía
- Departamento de Química-Física, E.U.I.T.A., Universidad de Castilla-La Mancha, Ronda de Calatrava 7, 13071 Ciudad Real, Spain.
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100
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Edwards HGM, Currie KJ, Ali HRH, Jorge Villar SE, David AR, Denton J. Raman spectroscopy of natron: shedding light on ancient Egyptian mummification. Anal Bioanal Chem 2007; 388:683-9. [PMID: 17404715 DOI: 10.1007/s00216-007-1249-4] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2007] [Revised: 03/02/2007] [Accepted: 03/07/2007] [Indexed: 11/25/2022]
Abstract
The mummification ritual in ancient Egypt involved the evisceration of the corpse and its desiccation using natron, a naturally occurring evaporitic mineral deposit from the Wadi Natrun, Egypt. The deposit typically contains sodium carbonate, sodium bicarbonate and impurities of chloride and sulfate as its major elemental components. It is believed that the function of the natron was to rapidly remove the water from the cadaver to prevent microbial attack associated with subsequent biological tissue degradation and putrefaction. Several specimens of natron that were recently collected from the Wadi Natrun contained coloured zones interspersed with the mineral matrix that are superficially reminiscent of extremophilic cyanobacterial colonisation found elsewhere in hot and cold deserts. Raman spectroscopy of these specimens using visible and near-infrared laser excitation has revealed not only the mineral composition of the natron, but also evidence for the presence of cyanobacterial colonies in several coloured zones observed in the mineral matrix. Key Raman biosignatures of carotenoids, scytonemin and chlorophyll have been identified.
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Affiliation(s)
- Howell G M Edwards
- Chemical and Forensic Sciences, School of Life Sciences, University of Bradford, Bradford, BD7 1DP, UK.
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