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Senthilkumar P, Nithya C, Anbarasan PM. Quantum chemical investigations on the effect of dodecyloxy chromophore in 4-amino stilbene sensitizer for DSSCs. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 122:15-21. [PMID: 24291449 DOI: 10.1016/j.saa.2013.11.023] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2013] [Revised: 11/04/2013] [Accepted: 11/05/2013] [Indexed: 06/02/2023]
Abstract
Stilbene based metal free organic dye sensitizer has been designed first time for dye sensitized solar cells applications. The geometries, electronic structures and dipole moment of the chosen 4-amino-4'-dodecyloxy-stilbene dye sensitizer has been analyzed by using Density Functional Theory (DFT) and Time Dependent DFT (TD-DFT) calculations (based on hybrid functional B3LYP). The HOMO and LUMO energies of the dye 4-amino-4'-dodecyloxy-stilbene are -4.95 and -0.87 eV respectively calculated by using TD-DFT. To understand the conversion efficiency of the chosen dye architecture unit we selected TiO2 as a model for semiconductor. The values of polarizability and hyperpolarizability are 165. 94 and 347.74 a.u respectively based on DFT calculations. Results reveal that the selected dye sensitizer exhibits large dipole moment difference between the ground and excited state which is comparable to that of metal based dye sensitizers. Further the large dipole moment would be expected to give high photo-current conversion efficiency in practical DSSCs and also it is a promising candidate as a sensitizer for DSSC applications.
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Senthilkumar P, Nithya C, Anbarasan PM. Effect of donor (tetradecyloxy) and acceptor (carboxamide) groups in trans-stilbene for DSSCs: quantum chemical investigations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 117:181-185. [PMID: 23988535 DOI: 10.1016/j.saa.2013.07.110] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2013] [Revised: 07/23/2013] [Accepted: 07/31/2013] [Indexed: 06/02/2023]
Abstract
Incorporation of tetradecyloxy and carboxamide groups in trans-stilbene molecule (dye) has been investigated first time for Dye Sensitized Solar Cells (DSSCs) applications. To understand the changes in electronic structure, geometry, dipole moment and polarizability of the mentioned dye architecture has been carried out by using density functional theory (DFT) and time dependent DFT calculations using hybrid functional B3LYP method. Further, the semiconductor TiO2 is also used as a model to evaluate the photo conversion efficiency of the chosen dye architecture. Results reveal that tetradecyloxy and carboxamide groups act as an excellent donor and acceptor groups respectively which give rise to larger difference in excited state dipole moment than the ground state. This kind of stilbene based metal free organic dyes are act as a promising sensitizer for practical DSSCs applications.
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Senthilkumar P, Umapathy M, Dhanalakshmi K. Modulated adaptive fuzzy controller for position control of SMA wire actuator. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2014. [DOI: 10.3233/ifs-130974] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Senthilkumar P, Jagatheesan PR, Anandh MA, Rajarajan G, Lurthureetha T. Production performances and egg characteristics of emu ( Dromaius novaehollandiae) birds. INDIAN J ANIM RES 2014. [DOI: 10.5958/j.0976-0555.48.1.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Mugundhan K, Senthilkumar P. Persistent hypoglossal artery--a rare vascular anomaly. THE JOURNAL OF THE ASSOCIATION OF PHYSICIANS OF INDIA 2013; 61:812-813. [PMID: 24974495] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
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Sarkar B, Nandy M, Manikandan A, Basu P, Sujatha N, Ray DK, Senthilkumar P, Ray S, Roy SS, Ray A, Basu S, Bhattacharya K. SU-E-T-57: Estimation of Uncertainty in Dose Delivery Due to MLC Position Inaccuracies by Inverse Derivative Method during Volumetric Modulated Arc Therapy Delivery by Elekta Beam Modulator. Med Phys 2012. [DOI: 10.1118/1.4735113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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DeSarkar M, Senthilkumar P, Franklin S, Chatterjee G. Effect of particulate fillers on thermal expansions and other critical performances of polycarbonate-based compositions. J Appl Polym Sci 2011. [DOI: 10.1002/app.33667] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Sarkar B, Manikandan A, Roy S, Senthilkumar P, Roy A, Basu S, Bhattachrya K, Ghosh B. SU-E-T-68: Beam Matching of Linear Accelerators by Using Mathematical Functions. Med Phys 2011. [DOI: 10.1118/1.3612019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Samrot AV, Avinesh RB, Sukeetha SD, Senthilkumar P. Accumulation of Poly[(R)-3-hydroxyalkanoates] in Enterobacter cloacae SU-1 During Growth with Two Different Carbon Sources in Batch Culture. Appl Biochem Biotechnol 2010; 163:195-203. [DOI: 10.1007/s12010-010-9028-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2009] [Accepted: 06/28/2010] [Indexed: 11/29/2022]
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Dayal R, Senthilkumar P, Katoch VM, Chauhan DS, Yadav NK. Diagnostic value of real time PCR for neurotuberculosis. Indian Pediatr 2010; 47:631-632. [PMID: 20683119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
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Rajkumar K, Sivakumar S, Senthilkumar P, Prabha D, Subbhuraam CV, Song YC. Effects of selected heavy metals (Pb, Cu, Ni, and Cd) in the aquatic medium on the restoration potential and accumulation in the stem cuttings of the terrestrial plant, Talinum triangulare Linn. ECOTOXICOLOGY (LONDON, ENGLAND) 2009; 18:952-960. [PMID: 19590954 DOI: 10.1007/s10646-009-0371-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2009] [Accepted: 06/24/2009] [Indexed: 05/28/2023]
Abstract
The heavy metal (Cu, Pb, Ni, and Cd) accumulation capacity of the stem cuttings of the terrestrial, ornamental plant, Talinum triangulare was assessed in hydroponic medium. The stem cuttings of T. triangulare, grew well in distilled water regenerating roots and aerial parts. On exposure to various concentrations of Cu, Pb, Ni, and Cd, a concentration dependent decrease was observed in the number of leaves produced and roots regenerated and an increase in the number of days required for the initiation of roots. The number of leaves produced showed an increasing trend in almost all treatment concentrations of Cu, Pb, Ni, and Cd with an increase in the duration of experiment, whereas, with an increase in the treatment concentration of metals a significant (P < 0.05) decrease was observed in the number of leaves produced. The number of days required for root initiation in metal solutions, however, increased with increasing concentration of Cu, Pb, Ni, and Cd. The root development was completely arrested from 10 mg l(-1) of Ni and 4 mg l(-1) of Cd. Compared to the control, a significant decrease was recorded in the number of roots produced in all treatment concentrations of Cu, Pb, Ni, and Cd. Pink colouration of metal solution consequent to leaching of plant pigment from T. triangulare was observed which was not persistent and disappeared after a few days. Decaying of stem was observed when exposed to Ni and Cd but not to Cu and Pb. Although, copper accumulation by T. triangulare at treatment concentration of 15 and 20 mg l(-1) exceeded 1,000 mg kg(-1) dry matter, necessary pot culture experiment is required before "T. triangulare" can be definitely classified as a Cu hyperaccumulator.
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Sriram D, Yogeeswari P, Senthilkumar P, Dewakar S, Rohit N, Debjani B, Bhat P, Veugopal B, Pavan V, Thimmappa H. Novel Pthalazinyl Derivatives: Synthesis, Antimycobacterial Activities, and Inhibition of Mycobacterium Tuberculosis Isocitrate Lyase Enzyme. Med Chem 2009; 5:422-33. [DOI: 10.2174/157340609789117886] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2009] [Accepted: 05/25/2009] [Indexed: 11/22/2022]
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Anandakumar AM, Paulsamy S, Kumar PS, Senthilkumar P. Preliminary phytochemical studies for the quantification of secondary metabolites of medicinal importance in the plant, Acalypha fruticosa Forssk. ACTA ACUST UNITED AC 2009. [DOI: 10.31018/jans.v1i1.31] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The medicinal plant, Acalypha fruticosa Forssk for the treatment of dyspepsia, stomachache, fever, jaundice, skin diseases and even as an antidote is generally distributed in different environments of tropical region in Coimbatore district of Tamil Nadu. However, its occurrence is more common in lower hills of Western Ghats and other habitats in this region where the soil is stony with low moisture. So far, there was no study on the influence of habitat conditions on the change in the content of secondary metabolites of medicinal importance in this plant. Hence to know the changes in the content of such secondary metabolites in the leaves of A. fruticosa, the present study was undertaken in three different habitats. Thin layer chromatography revealed the presence of phytochemical compounds viz., alkaloids, flavonoids and saponins in the leaves of all the three populations. Further the content of all these compounds are found to be higher in the population of dry habitats.
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Senthilkumar P, Nagalakshmi D, Ramana Reddy Y, Sudhakar K. Effect of different level and source of copper supplementation on immune response and copper dependent enzyme activity in lambs. Trop Anim Health Prod 2008; 41:645-53. [DOI: 10.1007/s11250-008-9236-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2008] [Accepted: 08/28/2008] [Indexed: 11/30/2022]
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Padmavathy S, Paulsamy S, Senthilkumar P, Sivashanmugam M. In Vitro Organogenesis of Lycianthes bigeminata Bitter. Anc Sci Life 2007; 26:18-23. [PMID: 22557245 PMCID: PMC3330881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2006] [Accepted: 01/10/2007] [Indexed: 11/23/2022] Open
Abstract
Lycianthes bigeminata Bitter (Solanaceae) is an important medicinal herb distributed in the sholas of Nilgiris and chiefly used for curing ulcer. It is reported that the species is present in the sholas with poor population size in comparison to other constituent species. Owing to the demand and subsequent exploitation, it is predicted that it may occupy still poor association in the sholas of Nilgiris in course of time. Hence in vitro regeneration through employing tissue culture technique is needed. The preliminary attempt in the present study reports that the MS medium supplemented with Benzyl Amino Purine (BAP) and Naphthalene Amino Acid (NAA) at 0.5 mg/l each, induced effective callus formation. However further studies on hardening is suggested to know the survivability of this species.
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Mohanapriya S, Senthilkumar P, Sivakumar S, Dineshkumar M, Subbhuraam CV. Effects of copper sulfate and copper nitrate in aquatic medium on the restoration potential and accumulation of copper in stem cuttings of the terrestrial medicinal plant, Portulaca oleracea linn. ENVIRONMENTAL MONITORING AND ASSESSMENT 2006; 121:233-44. [PMID: 16758284 DOI: 10.1007/s10661-005-9117-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2005] [Accepted: 11/04/2005] [Indexed: 05/10/2023]
Abstract
The stem cuttings of the terrestrial, ornamental plant, Portulaca oleracea, grew well in distilled water by producing adventitious roots and leaves. However, when exposed to various concentrations of sulfate and nitrate salts of copper resulted in a suppression of root growth, increase in initiation time of roots and sprouts and decay of stem cuttings from the cut open end, decrease in number of leaves with an increase in concentration of copper in the growth medium. Accumulation of copper increased with increasing concentrations of both copper sulfate and copper nitrate. However, copper accumulation was greater in copper nitrate than in copper sulfate treatment. Hence, copper in the presence of nitrate is more toxic than in the presence of sulfate. The accumulation factors in all treatment concentrations were greater than 1, hence P. oleracea is a copper accumulator.
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Deepa R, Senthilkumar P, Sivakumar S, Duraisamy P, Subbhuraam CV. Copper availability and accumulation by Portulaca oleracea Linn. stem cutting. ENVIRONMENTAL MONITORING AND ASSESSMENT 2006; 116:185-95. [PMID: 16779589 DOI: 10.1007/s10661-006-7235-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2005] [Accepted: 05/12/2005] [Indexed: 05/10/2023]
Abstract
The Cu accumulation capacity of stem cuttings of Portulaca oleracea was assessed in two different soils, alfisol and vertisol, which differ from each other mainly due to their clay content - several fold lower in the former than in the latter. The DTPA extractable concentration of Cu in soil and the level of its accumulation in stem cuttings were, therefore, greater in alfisol than in vertisol. In the mixed soils, the DTPA extractable as well as plant accumulated levels of Cu decreased with an increase in the proportion of vertisol. With an increase in the soil available and plant accumulated Cu, a decrease has been observed in the ability of stem cuttings to regenerate leaves and roots. As a consequence biomass reduction has been observed with an increase in the concentration of Cu in the soil and plant body. In view of comparatively low availability of Cu in vertisol, regeneration of stem cuttings occurred up to a concentration of 1600 microg of Cu/g of soil, whereas in alfisol it occurred only up to 200 microg of Cu/g of soil. The results of the present study showed that P. oleracea stem cutting is an accumulator of Cu and the availability of Cu in soils could be manipulated through addition of clay since the plant available concentration of Cu is less in the soil (vertisol) with high clay content.
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Gogate PR, Shirgaonkar IZ, Sivakumar M, Senthilkumar P, Vichare NP, Pandit AB. Cavitation reactors: Efficiency assessment using a model reaction. AIChE J 2006. [DOI: 10.1002/aic.690471115] [Citation(s) in RCA: 240] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Senthilkumar P, Prince WSPM, Sivakumar S, Subbhuraam CV. Prosopis juliflora--a green solution to decontaminate heavy metal (Cu and Cd) contaminated soils. CHEMOSPHERE 2005; 60:1493-6. [PMID: 16054919 DOI: 10.1016/j.chemosphere.2005.02.022] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2004] [Revised: 01/24/2005] [Accepted: 02/09/2005] [Indexed: 05/03/2023]
Abstract
Soil and plant samples (root and shoot) of Prosopis juliflora were collected in the vicinity of metal based foundry units in Coimbatore and assessed for their heavy metal content (Cu and Cd) to ascertain the use of P. juliflora as a green solution to decontaminate soils contaminated with Cu and Cd. The results showed that Cu and Cd content was much higher in plant components compared to their extractable level in the soil. Furthermore, there exist a strong correlation between the distance of the sources of industrial units and accumulation of heavy metals in plants. Accumulation of Cd in roots is comparatively higher than that of shoots. However, in case of Cu no such clear trend is seen. Considering the accumulation efficiency and tolerance of P. juliflora to Cd and Cu, this plant can be explored further for the decontamination of metal polluted soils. On the other hand, in view of heavy metal accumulate the practice of providing foliage and pods as fodder for live stock should be avoided.
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Sivakumar M, Senthilkumar P, Majumdar S, Pandit AB. Ultrasound mediated alkaline hydrolysis of methyl benzoate--reinvestigation with crucial parameters. ULTRASONICS SONOCHEMISTRY 2002; 9:25-30. [PMID: 11602992 DOI: 10.1016/s1350-4177(01)00099-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
In the present work hydrolysis of methyl benzoate was carried out using aqueous sodium hydroxide solution at room temperature in the presence of ultrasound since otherwise the same reaction takes place at relatively high temperature. Also, the above hydrolysis reaction was investigated at a relatively larger scale with the variation in parameters influencing the emulsification process and hence the reaction rates. It has been observed that the position of ultrasound source on the liquid-liquid interface is a crucial parameter affecting the two-phase emulsification rates. The poor bulk mixing occurring in the presence of ultrasound alone with an increase in the volume of the reaction mixture and its consequent effect on the reaction kinetics has been conclusively established. These studies have shown that the use of ultrasound with mechanical stirring can result in substantial reduction in the overall power consumption, especially for reaction systems like hydrolysis that do not require very high temperatures and pressures generated by cavitation.
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Kadirvelu K, Senthilkumar P, Thamaraiselvi K, Subburam V. Activated carbon prepared from biomass as adsorbent: elimination of Ni(II) from aqueous solution. BIORESOURCE TECHNOLOGY 2002; 81:87-90. [PMID: 11708760 DOI: 10.1016/s0960-8524(01)00093-1] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Activated carbon (AC) prepared from waste Parthenium was used to eliminate Ni(lI) from aqueous solution by adsorption. Batch mode adsorption experiments are carried out, by varying contact time, metal ion concentration, carbon concentration, pH and desorption to assess kinetic and equilibrium parameters. They allowed initial adsorption coefficient, adsorption rate constant and maximum adsorption capacities to be computed. The adsorption data were modeled by using both Langmuir and Freundlich classical adsorption isotherms. The adsorption capacity (Q0) calculated from the Langmuir isotherm was 54.35 mg Ni(II)/g of AC at initial pH of 5.0 and 20 degrees C, for the particle size 250-500 microm. Increase in pH from 2 to 10 increased percent removal of metal ion. The regeneration by HCl of Ni(II)-saturated carbon by HCl, allowed suggestion of an adsorption mechanism by ion-exchange between metal ion and H+ ions on the AC surfaces. Quantitative recovery of Ni(II) was possible with HCl.
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Sivakumar S, Senthilkumar P, Subburam V. Carbon from Cassava peel, an agricultural waste, as an adsorbent in the removal of dyes and metal ions from aqueous solution. BIORESOURCE TECHNOLOGY 2001; 80:233-235. [PMID: 11601548 DOI: 10.1016/s0960-8524(00)00179-6] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Cassava (Manihot esculenta) is a short lived erect perennial shrub, planted vegetatively from hard wood stem cuttings. It is an important crop across a wide range of tropical environments and is a significant component of cropping systems. Cassava peel is an agricultural waste from the food processing industry. Activated carbons prepared from waste cassava peel employing physical and chemical methods were tested for their efficiency in the removal of dyes and metal ions from aqueous solution. While both of these were efficient as adsorbents for dyes and metal ions, the material impregnated with H3PO4 showed higher efficiency than the heat treated materials.
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Prince SP, Senthilkumar P, Subburam V. Mulberry-silkworm food chain--a templet to assess heavy metal mobility in terrestrial ecosystems. ENVIRONMENTAL MONITORING AND ASSESSMENT 2001; 69:231-238. [PMID: 11497380 DOI: 10.1023/a:1010715606097] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Assessment of the food chain mobility of heavy metals in the natural ecosystem receives more attention nowadays. In the present study, mulberry-silkworm food chain has been focused as a templet to assess the biomobility of heavy metals in soil-higher plant-insect hierarchy. Both in the case of Cd and Cu treatments, higher mobility was observed in the level-1 (soil-root) followed by level-3 (leaf-larva), level-4 (larvae-faecal) and level-2 (root-leaf). Consequently, roots accumulated more amounts of Cd and Cu, with a limited transport to the leaves. Among the two metals (Cd and Cu) tested, in the plant, the transfer potential of Cd exceeds that of Cu. Whereas in the case of leaf-larval transfer, Cu precedes over Cd. Accumulation of Cd and Cu in all the levels (1-4) tested showed a concentration dependent increase, except in the level 4 (larva-faecal) of Cd treatment where a declining trend was noticed.
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Vichare NP, Senthilkumar P, Moholkar VS, Gogate PR, Pandit AB. Energy Analysis in Acoustic Cavitation. Ind Eng Chem Res 2000. [DOI: 10.1021/ie9906159] [Citation(s) in RCA: 121] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Narayanan KK, Senthilkumar P, Sridhar VV, Thomas G, Thomas J. Organization of the mitochondrial Cob 2 pseudogene in different lines of rice. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1995; 90:1087-1093. [PMID: 24173067 DOI: 10.1007/bf00222926] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/1994] [Accepted: 12/08/1994] [Indexed: 06/02/2023]
Abstract
In the fertile rice line IR 36 there are two copies of the apocytochrome b (cob) gene: a functional copy, cob 1, and a pseudogene, cob 2 (Kaleikau et al. 1992). In a survey of diverse rice lines, we found that cob 2 was absent in the wild abortive(WA)-type cytoplasmic male-sterile cytoplasm, but was present in the fertile lines. While cob 1 was conserved among all the lines, fertile and sterile, the cob 2 region was different in the fertile lines tested. The 5' regions of most cob 2 loci were similar to cob 1 (about 4 kb of the flanking region and most of the coding region), but the 3' region varied among different fertile lines. The point of divergence, the break-point, from the cob 1 sequence was conserved in all the cob 2 regions tested. In all the cob 2 regions, this break-point seems to be linked to the variable region of cob 2 through a conserved 192-bp segment, which is not a part of cob 1. It is proposed that the cob 2 regions could have been produced by recombination or insertion events involving cob 1 and the 192-bp segment which is present at different locations in the mitochondrial genomes of the various rice lines.
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