Carcase weight and dressing percentage are increased using Australian Sheep Breeding Values for increased weight and muscling and reduced fat depth

Pre-slaughter live weight, dressing percentage, and hot standard carcase weight (HCWT) from the 2007, 2008, 2009 and 2010 birth-years of the Information Nucleus Flock Lambs (n=7325) were analysed using linear mixed effects models. Increasing the sire breeding value for post-weaning weight (PWWT), and c-site eye muscle depth (PEMD), and reducing the sire breeding value for fat depth (PFAT) all had positive impacts on HCWT. The magnitude of the PWWT effect was greater in pure bred Merinos compared to Maternal and Terminal sired progeny. The improved HCWT resulting from increased PEMD was entirely due to its impact on improving dressing percentage, given that it had no impact on pre-slaughter live weight. There were marked differences between sire types and dam breeds, with pure-bred Merinos having lower pre-slaughter weight, reduced dressing percentage, and lower HCWT than progeny from Terminal and Maternal sired lambs or progeny from Maternal (1st cross) dams.

Mouse models for Aicardi-Goutières syndrome provide clues to the molecular pathogenesis of systemic autoimmunity

Aicardi-Goutières syndrome (AGS) is a hereditary autoimmune disease which overlaps clinically and pathogenetically with systemic lupus erythematosus (SLE), and can be regarded as a monogenic variant of SLE. Both conditions are characterized by chronic activation of anti-viral type I interferon (IFN) responses. AGS can be caused by mutations in one of several genes encoding intracellular enzymes all involved in nucleic acid metabolism. Mouse models of AGS-associated defects yielded distinct phenotypes and reproduced important features of the disease. Analysis of these mutant mouse lines stimulated a new concept of autoimmunity caused by intracellular accumulations of nucleic acids, which trigger a chronic cell-intrinsic antiviral type I IFN response and thereby autoimmunity. This model is of major relevance for our understanding of SLE pathogenesis. Findings in gene-targeted mice deficient for AGS associated enzymes are summarized in this review.

Plantain (Plantago lanceolata L.) and perennial ryegrass (Lolium perenne L.) as pregnancy and lactation feed for ewes joined at 8 months of age

Ewe nutrition during pregnancy and lactation is a key determinant of ewe and lamb performance. A paddock-scale field experiment in western Victoria, Australia, tested the hypothesis that grazing maiden ewes on plantain (Plantago lanceolata L.) from mid-pregnancy until lamb weaning (July 2010–January 2011) would increase ewe liveweight and condition score during this period, reduce worm egg counts, and increase lamb liveweights at birth, marking and weaning, relative to tetraploid perennial ryegrass (Lolium perenne L.), but that further increases would be achieved by offering a spatially arranged sward of plantain and perennial ryegrass. The experiment tested three treatments: plantain (PL), perennial ryegrass (PR), and a 50 : 50 (by area) spatially separated mixture of perennial ryegrass and plantain (PR + PL). Plots were ~1 ha in size arranged in a randomised complete block design with four replications. The ewes were Coopworth composites joined at 8 months of age. Feed-on-offer levels (kg DM/ha) did not differ (P > 0.05) between treatments, with 2.3–3.0 t DM/ha being available pre-grazing. Twin-bearing ewes had higher (P < 0.05) liveweights when offered PR + PL compared with PR or PL at late-pregnancy and higher (P < 0.05) liveweights than PR but not PL (P > 0.05) at lamb marking. At weaning, single-born lambs were heavier (P < 0.05) on PR than PR + PL, with the PL being intermediate. There were no other significant differences (P > 0.05). This experiment has found that feeding plantain to ewes during pregnancy and lactation, or offering ewes spatially separated mixes of plantain and perennial ryegrass, offers no clear liveweight or worm egg count improvement for ewes and lambs relative to a tetraploid perennial ryegrass under Western Victorian conditions.

The economic benefits of providing shelter to reduce the mortality of twin lambs in south-western Victoria

Achieving higher lamb weaning percentages by reducing lamb mortality can improve the profitability of sheep enterprises. In this paper we estimated the financial benefits from providing shelter to reduce the mortality of twin lambs in self-replacing Merino or dual-purpose Merino flock enterprises in south-west Victoria. A whole-farm bio-economic model (MIDAS) was initially used to estimate the increase in profit from reducing mortality of twin lambs and a second analysis included the costs of using perennial grass hedges to provide the shelter during lambing. The economic value of providing shelter was tested at three rates of twinning (10, 30 and 50%), three rates of mortality without shelter (70, 50 and 30%) and two levels of reduction in lamb mortality by providing shelter (25 and 50% reduction). A sensitivity analysis to wool and lamb prices, costs of establishing the grass hedges and stocking rates in the shelter area were also tested. Overall, more than 2500 scenarios were tested. Across the range of twinning rates and levels of twin mortality tested, at standard wool and meat prices, providing shelter to the dual-purpose Merino ewe flock was always profitable ($0.05 to 11.35/ewe) and the profits from providing shelter to the self-replacing Merino ewe flock were generally lower ($0.15 to $6.35/ewe). The impacts of changing wool and lamb prices depended on enterprise type, whereas the costs of establishment of the hedges or stocking rate of ewes in the hedge area during lambing had little impact on profitability. The main factor that determined the economic return from shelter was the reduction in mortality provided by the shelter but the proportion of twin-bearing ewes in the flock and the base rate of lamb mortality without shelter was also important. Overall, based on the assumptions used, we conclude that the profitability of many sheep enterprises lambing during frequent high chill weather conditions in temperate areas of south-eastern Australia could be improved by providing low cost shelter for twin-bearing Merino ewes lambing from July to September.

A survey of post-weaning mortality of sheep in Australia and its association with farm and management factors

A cross-sectional telephone survey of post-weaning sheep management and mortality was conducted involving 1410 farmers from across Australia. The average reported post-weaning mortality was 4.6%. Mortality was greatest in Queensland and Western Australia, and least in New South Wales, Victoria, and South Australia. Weaner mortality was also greater in the pastoral zone than in the sheep–cereals or high-rainfall zones. Overall, 44% of farms had mortality identified as ‘high’, exceeding the suggested benchmark of ≤4% per annum. High mortality was reported on 50% and 32% of farms with predominantly Merino and crossbred weaners, respectively. There was no statistically significant association between high mortality and the main month of lambing for a flock. Larger sheep flocks, flocks with a smaller proportion of weaners, and farms of smaller area were associated with a greater likelihood of high weaner mortality. The odds of high mortality in weaner flocks that were routinely separated according to bodyweight or condition score was half that of flocks that were managed as one group. Overall, 84% of farmers regularly provided supplementary feed to weaner sheep, but the kind of supplement offered and the proportions of farms routinely supplementing differed between states and sheep production zones. Only high-protein supplementary feeding was associated with lower odds of high mortality. This survey confirms that poor post-weaning survival remains a widespread issue for the Australian sheep industry but identifies farm and management factors associated with reduced weaner mortality.

Reproductive performance in the Sheep CRC Information Nucleus using artificial insemination across different sheep-production environments in southern Australia

The present paper covers reproductive performance in an artificial-insemination (AI) program of the Sheep CRC Information Nucleus with 24 699 lambs born at eight locations in southern Australia across five lambings between 2007 and 2011. Results from AI with frozen semen compared well with industry standards for natural mating. Conception rates averaged 72%, and 1.45 lambs were born per ewe pregnant for Merino ewes and 1.67 for crossbreds. Lamb deaths averaged 21% for Merino ewes and 15% for crossbreds and 19%, 22% and 20% for lambs from ewes that were mated to terminal, Merino and maternal sire types, respectively. Net reproductive rates were 82% for Merino ewes and 102% for crossbreds. From 3198 necropsies across 4 years, dystocia and starvation-mismothering accounted for 72% of lamb deaths within 5 days of lambing. Major risk factors for lamb mortality were birth type (single, twin or higher order), birthweight and dam breed. Losses were higher for twin and triplet lambs than for singles and there was greater mortality at relatively lighter and heavier birthweights. We conclude that reproductive rate in this AI program compared favourably with natural mating. Lamb birthweight for optimum survival was in the 4–8-kg range. Crossbred ewes had greater reproductive efficiency than did Merinos.

Relationships between skin follicle characteristics and fibre properties of Suri and Huacaya alpacas and Peppin Merino sheep

We aimed to quantify the number, type and arrangement of skin follicles in Huacaya and Suri alpaca skin and correlate their follicle characteristics with fibre traits of harvested fibre and compared these relationships with those of Merino sheep. Fibre and skin samples were collected from the mid-side of 12 Huacaya alpacas, 24 Suri alpacas and 10 Merino sheep. The mean fibre diameter (MFD ± s.e.) of the Huacaya and Suri were: 35.5 ± 0.9 and 28.3 ± 1.0 μm, respectively. The follicle groups found for alpacas were very different from the normal trio of primary follicles found in sheep and goats. The follicle group of the alpacas consisted of a single primary follicle surrounded by a variable number of secondary follicles. The mean ± s.e. primary follicle density was 3.1 ± 0.3 and 2.7 ± 0.1 follicles/mm2 for Huacaya and Suri, respectively. The mean ± s.e. secondary follicle density (SFD) was 13.7 ± 1.2 and 17.5 ± 0.6 follicles/mm2 for Huacaya and Suri, respectively. The mean ± s.e. ratio of secondary to primary follicles (S/P ratio) was 5.1 ± 0.5 for the Huacaya and 7.3 ± 0.2 for the Suri alpacas. The sheep had higher S/P ratios and SFD, lower MFD and produced significantly heavier fleeces. The key correlations found between traits in alpacas include a negative correlation between SFD and MFD (r = –0.71, P = 0.001) and a negative correlation between S/P ratio and MFD (r = –0.44, P = 0.003) and a positive correlation between S/P ratio and total follicle density (r = 0.38, P = 0.010). The study revealed that important relationships exist between alpaca skin follicle characteristics and fibre characteristics. It was the number of secondary follicles in a group that imparts density and a corresponding reduced MFD.

Participation in Lifetime Ewe Management results in changes in stocking rate, ewe management and reproductive performance on commercial farms

Lifetime Ewe Management is an extension program designed to assist sheep producers to improve their understanding of ewe nutrition and to develop the skills and confidence to improve their management. The course is based on a small-group extension model and was developed by the Lifetimewool project as a way to incorporate the research findings, economic modelling and producer guidelines developed by the project. Lifetime Ewe Management commenced in Victoria in the spring of 2006 and by the end of 2010, 221 producers had completed the 2-year program. The changes in knowledge, attitudes, skills, aspirations and management practices of 182 of these participants were examined. Participants of the Lifetime Ewe Management program increased their whole-farm stocking rates by 14%, increased lamb marking percentages by 11–13% depending on enterprise type, and decreased ewe mortality rates by 43%. These improvements resulted from a significant change in the perceived importance of managing ewes to condition-score targets to improve profitability and increases in the ability of participants to condition score ewes, assess pasture quantity and quality and feed budget. These changes were consistent regardless of how innovative the participants were at the beginning of the program. The appeal and success of the program was attributed largely to the small-group model where producers worked with their own flock under the guidance of a skilled facilitator and with access to effective decision-making tools. The Lifetime Ewe Management program design provides a blueprint for future extension programs striving to achieve widespread practice change.

On-farm paddock-scale comparisons across southern Australia confirm that increasing the nutrition of Merino ewes improves their production and the lifetime performance of their progeny

Experiments conducted by Lifetimewool at plot-scale have shown that differences in the maternal liveweight during pregnancy and lactation (liveweight profiles) of individual Merino ewes influences their wool production and reproductive rate as well as the birthweight, survival, weaning weight and lifetime wool production of their lambs in a predictable manner. This study determined whether these impacts of nutrition of the ewe on ewe and progeny performance are measurable on commercial properties across southern Australia at a paddock-scale where ewes were aggregated into flocks with a greater spread of the date of conception and where the liveweight profile of the flocks were managed based on random samples of 100 ewes and liveweight was uncorrected for fleece weight or conceptus. Eighteen paddock-scale experiments at 15 sites were conducted in cooperation with wool producers across Victoria, Western Australia, New South Wales, South Australia, and Tasmania. Each co-operator joined up to 1000 mixed aged adult Merino ewes. The flock was scanned using ultrasound at Day 50 from the start of joining to identify those ewes that conceived during the first 21 days of joining. These ewes were then split at random into two treatments and fed to achieve a target difference in liveweight of 10 kg or ~1 condition score/fat score at lambing. The production of ewes during their year of pregnancy and following their next joining was measured as was the performance of their progeny up to their third shearing. Only the 13 paddock-scale experiments that achieved a difference in liveweight profile at lambing of at least 4 kg were included in the final analysis. In these 13 experiments, increasing the nutrition of Merino ewes during pregnancy clearly increased the clean fleece weight and fibre diameter in ewes and the survival and lifetime wool production of their lambs. In most cases the size of the effect was not significantly different to that predicted by the relationship derived using individual liveweight profiles in the plot-scale experiments. This confirms that managing average ewe liveweight or condition score/fat score profile through better nutrition will lead to predictable increases in the performance of ewes and their progeny performance under commercial conditions and validates the use of the plot-scale relationships in economic analyses.

Evaluation of the impact of Lifetimewool on sheep producers

Lifetimewool was a national project that began in 2001 to develop profitable ewe feeding and management guidelines for wool producers across southern Australia. By 2005, the project included communication and adoption activities. Rigorous communication, adoption and evaluation plans were used to maintain focus on its objectives and to measure impacts. Evaluation was an integral part of the project’s development and allowed the project to gain a clear idea of its impact. The project aimed to influence at least 3000 producers nationally to change the management of their ewe flock by the adoption (or part thereof) of Lifetimewool messages and guidelines. More specifically, the project aimed to ‘cross the chasm’ and target producers that were deemed to be in the ‘early adopter’ and the ‘early majority’ segments. The project surveyed sheep producers, sheep industry consultants and sheep industry extension practitioners at the beginning and end of the project to gauge the change in knowledge, attitudes, skills and aspirations of wool producers over the life of the project. Results from the survey of sheep producers in 2008 indicate that the project achieved its aim. About 12% (~3000) of sheep producers nationally have changed practice due to information received from Lifetimewool since 2005. Many other producers have been affected through their increase in knowledge, belief and skills, and market segmentation of the audience shows that the project was successful in ‘crossing the chasm’. The strategies employed by the project to initiate change (i.e. using private consultants and extension professionals as a pathway to adoption, and involving producers, consultants and extension professionals in the development of the Lifetimewool key messages and tools) were validated. The survey results and analysis provided baseline data for future livestock management projects to build on producers’ progress towards practice change. The present paper looks at how the Lifetimewool’s evaluation plan provided a focus for and demonstrated meeting its objectives. In doing so, this paper also seeks to better understand the adoption process.

Successful adoption of new guidelines for the nutritional management of ewes is dependent on the development of appropriate tools and information

Low rates of adoption of innovations in sheep management have been blamed on the poor targeting of messages, low relative advantage of the innovation, a focus on awareness-raising activities rather than adoption activities, poor ‘packaging’ of information and few effective tools to aid decision making. Lifetimewool, a national project that developed management guidelines for Merino ewes specific to regions and different times of lambing, used a ‘review and improve’ process to identify areas of interest, level of knowledge and the skills required by different sectors of the audience to adopt the new recommendations for ewe management. To match these needs and to effectively communicate information from Lifetimewool, a combination of simple and complex tools were produced which were practical, effective, regionally specific and credible. All of the products were designed as a ‘family’ in terms of design and content, allowing a recognition by the producer that they complemented each other and led producers through logical steps for making decisions on managing and feeding ewes. The average awareness of all tools by consultants and extensionists was almost 90% and average usage rates were above 50%. However, the usage rates varied dramatically between tools and users, for example, 46% of consultants used the feed budget tables compared with 76% of extensionists for a similar awareness. Of 1353 producers surveyed more than 55% were aware of the Lifetimewool tools and average usage within this group was 19% and related to the length of time the tool had been available. An estimated 14 000 producers were aware of tools produced by Lifetimewool. The uptake and use of these tools by the target audiences support our hypothesis that tools of differing complexities are required to cater for individual needs.

The merit of condition score and fat score as alternatives to liveweight for managing the nutrition of ewes

The liveweight profile of Merino ewes is related to the production and profitability of the sheep enterprise, but few producers measure liveweight to manage the nutrition of Merino ewes. In this paper we examine the relationship between changes in liveweight and condition score using data from the Lifetimewool project and compare condition score and fat score as alternative monitoring tools. Analyses of liveweight and condition score data from 15 flocks of Merino ewes representing a range of different genotypes and environments showed that the relationship between change in liveweight and condition score was on average 9.2 kg per unit change in condition score or 0.19 times the standard reference weight of the flock. In two experiments experienced operators were used to estimate the condition score and fat score in over 200 ewes and accredited ultrasound scanners measured the eye muscle and fat depth at the C site in the same ewes. All assessments were repeated several times in random order. Within 24 h of the assessments the sheep were slaughtered at local abattoirs where the tissue depth at the GR site was measured on the hot carcasses. Both condition score and fat score were highly repeatable though subject to operator bias. They were related to each other and to the objective measures of fat and eye muscle depth at the C site. However, 95% of sheep below condition score 2.5 had a tissue depth (muscle and fat) at the GR site ≤3 mm, by definition equal to fat score 1. As the condition score of ewes on commercial properties often fluctuates between scores 2 and 3, and small changes in condition score within this range can have large effects on welfare and profit, we conclude that condition score is the most appropriate alternative to liveweight for managing the nutritional profile of ewes.

The national Lifetimewool project: a journey in evaluation

The national Lifetimewool project commenced in 2001 and was funded until 2008. The objective of this project was to develop practical grazing management guidelines that would enable wool growers throughout Australia to increase lifetime production of wool per hectare from ewes. The project achieved its ambitious target of influencing 3000 producers to change their management of ewe flocks by adoption (or part thereof) of Lifetimewool messages and guidelines by 2008. The present paper focuses specifically on the evaluation work that was conducted on the project between 2003 and 2008. It is a noteworthy journey because it provides a case study of the effective implementation of an evaluation plan. The Lifetimewool project used ‘people-centred evaluation’ to help guide the creation of an internal evaluation plan. The six core principles followed were: participation; program logic, a people-centred focus; multiple lines of evidence; reflection and learning and a clearly documented and resourced evaluation plan. These principles were applied from the onset of the project. The Lifetimewool team used the evaluation findings to refine the initial design. Based on learnings from their evaluation journey, they created and modified the extension and communications components of the project. The present paper contends that the evaluation process itself enabled the project team to plan and adjust the course of the project through evidence-based reflection and that this helped ensure that the targets were achieved and demonstrated.

Opportunities for genetic improvement of lamb survival

Data on lamb survival and associated traits involving records from 15 192 lambs, 6308 dams and 284 sires from the Sheep CRC’s Information Nucleus were studied. Lamb survival to 3 days of age and to weaning was 85 and 80%, respectively, and heritability (±s.e.) was 0.014 ± 0.010 and 0.010 ± 0.010, respectively. Of the 14 traits recorded at birth, time taken for the lamb to bleat, rectal temperature and crown–rump length had the highest genetic correlations with lamb survival to weaning (–0.43 ± 0.32, 0.56 ± 0.33 and –0.38 ± 0.36, respectively). Under selection for a multi-trait objective including net reproduction rate (but not lamb survival), survival was predicted to decline genetically by 0.25 lambs weaned per 100 lambs born.year, although this was reversed to a gain of 0.20 lambs weaned per 100 lambs born.year by including the trait in the breeding objective and using 50 half-sib and 50 progeny records per selection candidate. Accuracy of selection for lamb survival was improved to 0.735 with a selection index of lamb survival to weaning, lamb ease, birth coat score, time taken to bleat, rectal temperature and crown–rump length, with the addition of 50 half-sibs and 50 progeny records per candidate. Our results suggest that unless actively incorporated into breeding objectives, lamb survival may genetically decline; however, gains are possible with direct selection using half-sib and progeny records. The addition of indirect selection criteria for lamb survival can further improve accuracy, up to 93.4%, but requires further investigation.

Ultrafast conformational dynamics in cyclic azobenzene peptides of increased flexibility

Structural changes of peptides containing the azobenzene dye 4-aminomethyl-phenylazobenzoic acid (AMPB) are studied with ultrafast spectroscopy. AMPB peptides are a new class of molecules where the photoisomerizable dye azobenzene is linked to the peptide moiety via a flexible methylene spacer. The ultrafast reactions in the femtosecond to nanosecond time domain are investigated for the optical switch AMPB, a linear and cyclic octapeptide, and a bicyclic octapeptide containing an additional disulfide bridge. These molecules with increasing conformational constraints are studied for the cis to trans and the trans to cis photoreactions. For the cis to trans reaction the isomerization of the chromophore occurs fast in the 1-ps range, whereas it is slower (10-ps range) in the trans to cis reaction. In all peptides the structural changes of the chromophore lead to modifications in the peptide structure in the 10-ps-1-ns time range. The results indicate that the chromophore AMPB acts simultaneously as a fast molecular switch and as a sensor for initial conformational dynamics in the peptide. Experiments in the mid-infrared range where the structural changes of the peptide backbone are directly observed demonstrate that the essential part of the structural dynamics in the bicyclic AMPB peptide occurs faster than 10 ns.

[Prospective randomized comparative study of early functional outcome of 2 knee joint endoprosthesis systems--rotation plateau versus fixed polyethylene inlay]

AIM

Different systems are used for total knee arthroplasty (TKA). Compared were a press-fit femur condyle replacement system with fixed tibial PE-inlay versus a rotating tibia component system with an emphasis on the early functional results.

METHOD

Patient selection and the use of the Knee Society Score for this randomized and prospective study were based on the directives for TKA of the german Society for Orthopaedic and Trauma Surgery (DGOT). We examined the patients post-operatively after 1 week, 2 weeks, 6 weeks, 3 months, 6 months, and 1 year.

RESULTS

After 6 weeks an increase of the total knee score could be seen in both groups. The total knee score of the rotating tibia component increased from 93.96 pre-operatively to 113.57 after 6 weeks, to 139.82 after 3 months, to 154.32 after 6 months, and to 159.65 after one year. The total score with the fixed PE-inlay increased from 79.75 to 111.5 after 6 weeks, to 128.25 after 3 months, to 134.08 after 6 months, and to 130.08 after one year.

CONCLUSION

After 6 weeks the implant with the rotating tibia component showed a lasting higher score as compared to the implant with a fixed PE-inlay component using the same early rehabilitation and mobilization techniques.

Mutational studies on HslU and its docking mode with HslV

HslVU is an ATP-dependent prokaryotic protease complex. Despite detailed crystal and molecular structure determinations of free HslV and HslU, the mechanism of ATP-dependent peptide and protein hydrolysis remained unclear, mainly because the productive complex of HslV and HslU could not be unambiguously identified from the crystal data. In the crystalline complex, the I domains of HslU interact with HslV. Observations based on electron microscopy data were interpreted in the light of the crystal structure to indicate an alternative mode of association with the intermediate domains away from HslV. By generation and analysis of two dozen HslU mutants, we find that the amidolytic and caseinolytic activities of HslVU are quite robust to mutations on both alternative docking surfaces on HslU. In contrast, HslVU activity against the maltose-binding protein-SulA fusion protein depends on the presence of the I domain and is also sensitive to mutations in the N-terminal and C-terminal domains of HslU. Mutational studies around the hexameric pore of HslU seem to show that it is involved in the recognition/translocation of maltose-binding protein-SulA but not of chromogenic small substrates and casein. ATP-binding site mutations, among other things, confirm the essential role of the "sensor arginine" (R393) and the "arginine finger" (R325) in the ATPase action of HslU and demonstrate an important role for E321. Additionally, we report a better refined structure of the HslVU complex crystallized along with resorufin-labeled casein.

Photomodulation of conformational states. II. Mono- and bicyclic peptides with (4-aminomethyl)phenylazobenzoic acid as backbone constituent

It has been reported that backbone cyclization of octapeptides with the photoresponsive (4-aminomethyl)phenylazobenzoic acid imparts sufficient restraints to induce and stabilize ordered conformations of the peptide backbone in both the cis- and trans-azo-isomers (L. Ulysse, J. Cubillos, and J. Chmielewski, Journal of the American Chemical Society, 1995, Vol. 117, pp. 8466-8467). Correspondingly, the active-site octapeptide fragment H-Ala-Cys-Ala-Thr-Cys-Asp-Gly-Phe-OH [134-141] of thioredoxin reductase, with its high preference for a 3(10)-helix turn conformation centered on the Thr-Cys sequence, was backbone cyclized with this azobenzene moiety in the attempt to design a photoresponsive system where the conformational states of the peptide backbone are dictated by the configuration of the azobenzene and can be further modulated by the disulfide bridge. Nuclear magnetic resonance conformational analysis of the monocyclic compound clearly revealed the presence of two conformational families in both the cis- and trans-azo configuration. Of the higher populated conformational families, the structure of the trans-isomer seems like a pretzel-like folding, while the cis-isomer relaxes into a significantly less defined conformational state that does not exhibit any regular structural elements. Further restrictions imparted by disulfide bridging of the peptide moiety leads to an even better defined conformation for the trans-azo-isomer, whereas the cis-isomer can be described as a frustrated system without pronounced energy minima and thus with little conformational preferences. Our findings would suggest that this photoresponsive peptide template may not be of general usefulness for light-induced conformational transitions between two well-defined conformational states at least under the experimental conditions employed, even in the bicyclic form. However, trans --> cis isomerization of the bicyclic peptide is accompanied by a switch from a well-defined conformation to an ensemble of possible conformations.

Photomodulation of conformational states. I. Mono- and bicyclic peptides with (4-amino)phenylazobenzoic acid as backbone constituent

The thioredoxin reductase active-site fragment H-Ala-Cys-Ala-Thr-Cys-Asp-Gly-Phe-OH [134-141], which is known for its high tendency to assume an almost identical conformation as in the intact enzyme, was backbone cyclized with the photoresponsive (4-amino)phenylazobenzoic acid (APB) to produce a monocyclic and disulfide-bridged bicyclic APB-peptide. Light-induced reversible cis/trans isomerization occurs at identical extents in both the linear and the two cyclic forms. Nuclear magnetic resonance conformational analysis clearly revealed that in the bicyclic APB-peptide both as a trans- and cis-azo-isomer the constraints imparted by the bicyclic structure do not allow the molecule to relax into a defined low energy conformation, thus making the molecule a frustrated system that flip-flops between multiple conformational states. Conversely, the monocyclic APB peptide folds into a well-defined lowest energy structure as a trans-azo-isomer, which upon photoisomerization to the cis-azo configuration relaxes into a less restricted conformational space. First femtosecond spectroscopic analysis of the dynamics of the photoreaction confirm a fast first phase on the femtosecond time scale related to the cis/trans isomerization of the azobenzene moiety followed by a slower phase in the picosecond time scale that involves an adjustment of the peptide backbone. Due to the well- defined photoresponsive two-state transition of this monocyclic peptide molecule, it represents a model system well suited for studying the ultrafast dynamics of conformational transitions by time-resolved spectroscopy.

Photomodulation of conformational states. Synthesis of cyclic peptides with backbone-azobenzene moieties

The search for photoresponsive conformational transitions accompanied by changes in physicochemical and biological properties led us to the design of small cyclic peptides containing azobenzene moieties in the backbone. For this purpose, (4-aminomethyl)phenylazobenzoic acid (H-AMPB-OH) and (4-amino)phenylazobenzoic acid (H-APB-OH) were synthesized and used to cyclize a bis-cysteinyl-octapeptide giving monocyclic derivatives in which additional conformational restriction could be introduced by conversion to bicyclic structures with a disulphide bridge. While synthesis with H-AMPB-OH proceeded smoothly on a chlorotrityl-resin with Fmoc/tBu chemistry, the poor nucleophilicity of the arylamino group of H-APB-OH required special chemistry for satisfactory incorporation into the peptide chain. Additional difficulties were encountered in the reductive cleavage of the S-tert-butylthio group from the cysteine residues since concomitant reduction of the azobenzene moiety took place at competing rates. This difficulty was eventually bypassed by using the S-trityl protection. Side-chain cyclization of the APB-peptide proved to be difficult, suggesting that restricted conformational freedom was already present in the monocyclic form, a fact that was fully confirmed by NMR structural analysis. Conversely, the methylene spacer in the AMPB moiety introduced sufficient flexibility for facile and quantitative side-chain cyclization to the bicyclic form. Both of the monocyclic peptides and both of the bicyclic peptides are photoresponsive molecules which undergo cis/trans isomerization reversibly.

Photomodulation of the Conformation of Cyclic Peptides with Azobenzene Moieties in the Peptide Backbone

The cisright harpoon over left harpoon trans photoisomerization of the azobenzene building block 4-(4-aminophenylazo)benzoic acid incorporated in a cyclic peptide (see scheme) facilitated a two-state transition of the peptide chain from a rigid constrained conformation in the trans isomer into the largely free conformational space of the cis isomer.