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Morais PB, Lachance MA, Rosa CA. Saturnispora hagleri sp. nov., a yeast species isolated from Drosophila flies in Atlantic rainforest in Brazil. Int J Syst Evol Microbiol 2005; 55:1725-1727. [PMID: 16014509 DOI: 10.1099/ijs.0.63673-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Six strains representing a novel yeast species belonging to the genus Saturnispora were isolated from two species of the Drosophila fasciola subgroup (Drosophila repleta group) in an Atlantic rainforest site in Rio de Janeiro State, Brazil. Four strains were isolated from crops and one from external parts of Drosophila cardinae. The other strain was isolated from external parts of Drosophila fascioloides. Analysis of the D1/D2 large-subunit rDNA sequences indicated that the novel species is closely related to Saturnispora dispora. The name Saturnispora hagleri sp. nov. is proposed to accommodate these strains. The type strain is UFMG-55T (=CBS 10007T=NRRL Y-27828T).
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Affiliation(s)
- Paula B Morais
- Laboratório de Microbiologia Ambiental e Biologia, Campus Universitário de Palmas, Fundação Universidade Federal do Tocantins, Palmas, Tocantins, 77010-154, Brazil
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Carlos A Rosa
- Departamento de Microbiologia - ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
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102
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Lachance MA, Ewing CP, Bowles JM, Starmer WT. Metschnikowia hamakuensis sp. nov., Metschnikowia kamakouana sp. nov. and Metschnikowia mauinuiana sp. nov., three endemic yeasts from Hawaiian nitidulid beetles. Int J Syst Evol Microbiol 2005; 55:1369-1377. [PMID: 15879284 DOI: 10.1099/ijs.0.63615-0] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Three heterothallic, haplontic yeast species,Metschnikowia hamakuensis,Metschnikowia kamakouanaandMetschnikowia mauinuiana, are described from isolates associated with endemic nitidulid beetles living on various endemic plants on three Hawaiian islands. As morphospecies, they are similar toMetschnikowia hawaiiensis, but based on mating compatibility and ascospore formation, they can be assigned clearly to distinct biological species. Analysis of ITS/5·8S and D1/D2 large subunit rDNA sequences shows that, withM. hawaiiensisand two other isolates, these species form a distinct subclade within the large-sporedMetschnikowiaspecies, indicating that they are Hawaiian endemics. Type cultures are:M. hamakuensis, UWOPS 04-207.1T=CBS 10056T=NRRL Y-27834T(type, h+) and UWOPS 04-204.1=CBS 10055=NRRL Y-27833 (allotype, h−);M. kamakouana, UWOPS 04-112.5T=CBS 10058T=NRRL Y-27836T(type, h+) and UWOPS 04-109.1=CBS 10057=NRRL Y-27835 (allotype, h−); andM. mauinuiana, UWOPS 04-190.1T=CBS 10060T=NRRL Y-27838T(type, h+) and UWOPS 04-110.4=CBS 10059=NRRL Y-27837 (allotype, h−).
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Affiliation(s)
- Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Curtis P Ewing
- Department of Entomology, Cornell University, Ithaca, NY 14853, USA
| | - Jane M Bowles
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
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103
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Pimenta RS, Alves PDD, Corrêa A, Lachance MA, Prasad GS, Sinha BRRP, Rosa CA. Geotrichum silvicola sp. nov., a novel asexual arthroconidial yeast species related to the genus Galactomyces. Int J Syst Evol Microbiol 2005; 55:497-501. [PMID: 15657028 DOI: 10.1099/ijs.0.63187-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Four strains of an asexual arthroconidial yeast species were isolated from Drosophila flies in two Atlantic rain forest sites in Brazil and two strains from oak tasar silkworm larvae (Antheraea proylei) in India. Analysis of the sequences of the D1/D2 large subunit rRNA gene showed that this yeast represented a novel species of the genus Geotrichum, described as Geotrichum silvicola sp. nov. The novel species was related to the ascogenous genus Galactomyces. The closest relatives of Geotrichum silvicola were Galactomyces sp. strain NRRL Y-6418 and Galactomyces geotrichum. The type culture of Geotrichum silvicola is UFMG-354-2T (=CBS 9194T=NRRL Y-27641T).
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Affiliation(s)
- Raphael S Pimenta
- Departamento de Microbiologia - ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Priscila D D Alves
- Departamento de Microbiologia - ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Ary Corrêa
- Departamento de Microbiologia - ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - G S Prasad
- Microbial Type Culture Collection and Gene Bank (MTCC), Institute of Microbial Technology (IMTECH), Council of Scientific and Industrial Research (CSIR), Sector-39A, Chandigarh - 160 036, India
| | - B R R P Sinha
- Central Tasar Research and Training Institute, Ranchi, India
| | - Carlos A Rosa
- Departamento de Microbiologia - ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
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104
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Abstract
Two yeast strains were isolated from a bumblebee and bumblebee honey. The strains were almost identical in their D1/D2 domain of the large-subunit rDNA and their physiological abilities. In both respects the strains resembled Wickerhamiella domercqiae. On the basis of these data, it is proposed that the strains represent a novel species with the name Candida bombiphila sp. nov. The type strain is CBS 9712T (= NRRL Y-27640T = MH268T).
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Affiliation(s)
- Michael Brysch-Herzberg
- Philipps-University Marburg, Department of Biology, Plant Ecology, Karl-von-Frisch-Straße, 35043 Marburg, Germany
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
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105
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Abstract
Species abundances are important properties of ecological communities. Theoretical debate has arisen over whether communities are governed by assembly rules. Some ecologists have suggested that community organization depends on the phylogenetic relatedness of its interacting members. This postulate has not been adequately tested primarily because molecular phylogenies for entire communities are rare. We use the molecular phylogeny and species abundances from the well-studied yeasts that live in decaying cactus tissue (i.e., cactus yeast community) to demonstrate that community structure is indeed linked to genetic relatedness but that the relationship is different for the same yeasts found in hosts of two subfamilies of the Cactaceae. In the Opuntia cacti, the genetically related and unrelated yeasts have equivalent probability of being similar in abundance. Conversely, in the columnar cacti, the abundant yeast species tend to be genetically distant from one another, whereas the rare species tend to be closely related. The distinctive biochemical differences between the Opuntia and columnar cacti habitats suggest that conditions imposed by the environment modify the relationship between phylogenetic relatedness and species abundances in the cactus yeast community.
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106
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Ruivo CCC, Lachance MA, Bacci M, Carreiro SC, Rosa CA, Pagnocca FC. Candida leandrae sp. nov., an asexual ascomycetous yeast species isolated from tropical plants. Int J Syst Evol Microbiol 2004; 54:2405-2408. [PMID: 15545490 DOI: 10.1099/ijs.0.63259-0] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The novel yeast species Candida leandrae is described based on eight isolates from decaying fruits of Leandra reversa Cogn. (Melastomataceae) in an Atlantic rainforest site in Brazil, one from a Convolvulaceae flower in Costa Rica and one from a drosophilid in Hawai'i. The strains differed in their colony morphology, one being butyrous and smooth and the other being filamentous and rugose. Sequences of the D1/D2 domains of the large-subunit rRNA gene from both morphotypes were identical. C. leandrae belongs to the Kodamaea clade and is closely related to Candida restingae. The two species can be separated on the basis of growth at 37 °C and the assimilation of melezitose, negative in the novel species. The type culture of C. leandrae is strain UNESP 00-64RT (=CBS 9735T=NRRL Y-27757T).
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Affiliation(s)
- Carla C C Ruivo
- Centro de Estudos de Insetos Sociais e Departamento de Bioquímica e Microbiologia, Universidade Estadual Paulista - Unesp, CP 199, Rio Claro, SP, 13506-900, Brazil
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Maurício Bacci
- Centro de Estudos de Insetos Sociais e Departamento de Bioquímica e Microbiologia, Universidade Estadual Paulista - Unesp, CP 199, Rio Claro, SP, 13506-900, Brazil
| | - Solange C Carreiro
- Centro de Estudos de Insetos Sociais e Departamento de Bioquímica e Microbiologia, Universidade Estadual Paulista - Unesp, CP 199, Rio Claro, SP, 13506-900, Brazil
| | - Carlos A Rosa
- Departamento de Microbiologia - ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Fernando C Pagnocca
- Centro de Estudos de Insetos Sociais e Departamento de Bioquímica e Microbiologia, Universidade Estadual Paulista - Unesp, CP 199, Rio Claro, SP, 13506-900, Brazil
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107
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Morais PB, Teixeira LCRS, Bowles JM, Lachance MA, Rosa CA. sp. nov., a sporogenous methylotrophic yeast from tree exudates. FEMS Yeast Res 2004; 5:81-5. [PMID: 15381125 DOI: 10.1016/j.femsyr.2004.05.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2004] [Revised: 05/19/2004] [Accepted: 05/25/2004] [Indexed: 10/26/2022] Open
Abstract
Thirteen strains of a new ascospore-forming, methanol-assimilating yeast species were isolated from sap exudates of Sclerolobium sp. (carvoeiro) in two forest fragments in the state of Toncantins, Brazil, and from Hymenaea courbaril (guapinol, jatobá) in Guanacaste Province, Costa Rica. Analysis of the sequences of the D1/D2 large-subunit ribosomal DNA showed that the species belongs to the genus Ogataea (syn. Pichia), and it was described as Ogataea falcaomoraisii. The closest relatives are Candida ortonii and C. nemodendra. The type culture is UFMG-T264-1T (= CBS 9814T = NRRL Y-27756).
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Affiliation(s)
- Paula B Morais
- Laboratório de Microbiologia Ambiental e Biologia, Campus Universitário de Palmas, Fundação Universidade Federal do Tocantins, Palmas, Tocantins 77010-154, Brazil
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108
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Vu NV, Dao AH, Lachance MA. Issatchenkia hanoiensis, a new yeast species isolated from frass of the litchi fruit borer Conopomorpha cramerella Snellen. FEMS Yeast Res 2004; 4:113-7. [PMID: 14554203 DOI: 10.1016/s1567-1356(03)00079-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The new ascogenous yeast species Issatchenkia hanoiensis was discovered in the frass of the litchi fruit borer Conopomorpha cramerella Snellen. The yeast forms unconjugated persistent asci containing one to two roughened ascospores. The yeast has a CoQ-7 system, which is typical for the genus Issatchenkia. The closest species to I. hanoiensis as indicated by analysis of the partial ribosomal DNA large-subunit (D1/D2) sequence is the asexual species Candida pseudolambica. The two share 94.2% similarity in the sequenced region. Other species of Issatchenkia were also among the closest relatives of I. hanoiensis, the level of similarity ranging from 89.8% to 94.1%. The type culture is strain HB1.3.13=CBS 9198=NRRL Y-27509.
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Affiliation(s)
- Nguyen Vu Vu
- Department of Microbiology, Food Industries Research Institute, 301-Nguyen Trai, Thanh Xuan, Hanoi, Viet Nam
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109
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Carreiro SC, Pagnocca FC, Bacci M, Lachance MA, Bueno OC, Hebling MJA, Ruivo CCC, Rosa CA. Sympodiomyces attinorum sp. nov., a yeast species associated with nests of the leaf-cutting ant Atta sexdens. Int J Syst Evol Microbiol 2004; 54:1891-1894. [PMID: 15388759 DOI: 10.1099/ijs.0.63200-0] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Four strains of a novel yeast species were isolated from laboratory nests of the leaf-cutting ant Atta sexdens in Brazil. Three strains were found in older sponges and one was in a waste deposit in the ant nests. Sequencing of the D1/D2 region of the large-subunit rRNA gene showed that the novel species, named Sympodiomyces attinorum sp. nov., is phylogenetically related to Sympodiomyces parvus. Unlike Sympodiomyces parvus, Sympodiomyces attinorum can ferment glucose, assimilate methyl α-d-glucoside, salicin and citrate, and grow at 37 °C, thus enabling these two species to be distinguished. Differentiation from other related species is possible on the basis of other growth characteristics. The type strain of Sympodiomyces attinorum is UNESP-S156T (=CBS 9734T=NRRL Y-27639T).
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Affiliation(s)
- Solange C Carreiro
- Laboratório de Microbiologia de Alimentos, Campus Universitário de Palmas, Fundação Universidade Federal do Tocantins, Palmas, Tocantins, 77020-210, Brazil
| | - Fernando C Pagnocca
- Centro de Estudos de Insetos Sociais, CEIS, CP 199, Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil
| | - Maurício Bacci
- Centro de Estudos de Insetos Sociais, CEIS, CP 199, Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Odair C Bueno
- Centro de Estudos de Insetos Sociais, CEIS, CP 199, Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil
| | - Maria José A Hebling
- Centro de Estudos de Insetos Sociais, CEIS, CP 199, Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil
| | - Carla C C Ruivo
- Centro de Estudos de Insetos Sociais, CEIS, CP 199, Universidade Estadual Paulista, Rio Claro, São Paulo, 13506-900, Brazil
| | - Carlos A Rosa
- Departamento de Microbiologia, ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
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110
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Hirai A, Kano R, Makimura K, Duarte ER, Hamdan JS, Lachance MA, Yamaguchi H, Hasegawa A. Malassezia nana sp. nov., a novel lipid-dependent yeast species isolated from animals. Int J Syst Evol Microbiol 2004; 54:623-627. [PMID: 15023986 DOI: 10.1099/ijs.0.02776-0] [Citation(s) in RCA: 162] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Five isolates of a novel species of the yeast genus Malassezia were isolated from animals in Japan and Brazil. Phylogenetic trees based on the D1/D2 domains of the large-subunit (26S) rDNA sequences and nucleotide sequences of the internal transcribed spacer 1 region showed that the isolates were conspecific and belonged to the genus Malassezia. They were related closely to Malassezia dermatis and Malassezia sympodialis, but were clearly distinct from these two species and the other six species of Malassezia that have been reported, indicating that they should be classified as a novel species, Malassezia nana sp. nov. Morphologically and physiologically, M. nana resembles M. dermatis and M. sympodialis, but can be distinguished from these species by its inability to use Cremophor EL (Sigma) as the sole lipid source and to hydrolyse aesculin. The type strain of M. nana is NUSV 1003(T) (=CBS 9557(T)=JCM 12085(T)).
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Affiliation(s)
- Asuka Hirai
- Department of Pathobiology, Nihon University School of Veterinary Medicine, Kameino, Fujisawa, Kanagawa 252-8510, Japan
| | - Rui Kano
- Department of Pathobiology, Nihon University School of Veterinary Medicine, Kameino, Fujisawa, Kanagawa 252-8510, Japan
| | - Koichi Makimura
- Teikyo University Institute of Medical Mycology, Otsuka, Hachioji, Tokyo 192-0395, Japan
| | - Eduardo Robson Duarte
- Department of Microbiology, Biological Science Institute, Federal University of Minas Gerais, Avenida Antonio Carlos, Belo Horizonte, Minas Gerais, 31270-901, Brazil
| | - Júnia Soares Hamdan
- Department of Microbiology, Biological Science Institute, Federal University of Minas Gerais, Avenida Antonio Carlos, Belo Horizonte, Minas Gerais, 31270-901, Brazil
| | - Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Hideyo Yamaguchi
- Teikyo University Institute of Medical Mycology, Otsuka, Hachioji, Tokyo 192-0395, Japan
| | - Atsuhiko Hasegawa
- Department of Pathobiology, Nihon University School of Veterinary Medicine, Kameino, Fujisawa, Kanagawa 252-8510, Japan
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111
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Trindade RC, Resende MA, Pimenta RS, Lachance MA, Rosa CA. Candida sergipensis, a new asexual yeast species isolated from frozen pulps of tropical fruits. Antonie Van Leeuwenhoek 2004; 86:27-32. [PMID: 15103235 DOI: 10.1023/b:anto.0000024906.97501.81] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Sixteen strains of the new yeast species Candida sergipensis have been isolated from frozen pulps of the tropical fruits umbú ( Spondias tuberosa Avr. Cam.) and mangaba ( Hancornia speciosa Gom.). Candida sergipensis was one of the prevalent species in the yeast community of these substrates. The new asexual ascomycetous yeast is phylogenetically related to Candida spandovensis and Candida sorbophila, species belonging to the Wickerhamiella clade, as evidenced by the sequences of the D1/D2 domains of their large subunit ribosomal DNAs. The species C. sergipensis and C. spandovensis can be separated on the basis of growth on 50% glucose agar, xylose and succinate, negative for the first species and positive for the second. The type culture is strain UFMG-R188 (CBS 9567).
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Affiliation(s)
- Rita C Trindade
- Departamento de Microbiologia, ICB, C.P. 486, Universidade Federal de Minas Gerais, Belo Horizonte-MG, 31270-901, Brazil
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112
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Marinoni G, Lachance MA. Speciation in the large-spored clade and establishment of a new species, comb. nov. FEMS Yeast Res 2004; 4:587-96. [PMID: 15040946 DOI: 10.1016/j.femsyr.2003.12.005] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2003] [Revised: 11/05/2003] [Accepted: 12/05/2003] [Indexed: 11/19/2022] Open
Abstract
The reproductive boundaries among species in the large-spored Metschnikowia clade were studied by prototrophic recombinant selection, electrophoretic karyotyping, mitochondrial DNA restriction analysis, and DNA sequence analysis. Inviable ascospores arose from crosses between the two varieties of Metschnikowia continentalis, indicating that they should be recognized as separate species. Prototrophic recombinants were recovered from crosses between auxotrophic mutants of Metschnikowia borealis, M. continentalis, Metschnikowia lochheadii, Metschnikowia sp. UWO(PS)00-154.1, and Candida ipomoeae, showing that some genetic exchange is possible in spite of the sterility of the asci formed in interspecific crosses. Metschnikowia hawaiiensis, although capable of ascus formation when its h(-) mating type is crossed with the h(+) mating type of the other species, did not give rise to recombinants. In the other species, some recombinants acquired the ability to form asci directly from single cells. These often contained the chromosomes of both parents, suggesting formation of allodiploid hybrids. Other recombinants behaved as haploids and were similar to one parent except for having inherited the selectable wild-type allele from the other parent. In most, but not all cases, inheritance of the mitochondrial genome was uniparental and correlated with the inheritance of the nuclear chromosome complement. In some cases, what appeared to be a recombinant mitochondrial genome was observed. Phylogenies derived from the sequences of various DNA regions were not congruent, indicating that hybridization may have taken place in nature as the large-spored species diverged from their common ancestor. Further evidence that C. ipomoeae arose from a natural recombination event was obtained, but a pair of Metschnikowia species that might represent derived forms of the parents could not be identified conclusively. C. ipomoeae and most of its closely related Metschnikowia species contained a group-II intron in the mitochondrial small-subunit ribosomal gene. The intron was absent in M. borealis, M. hawaiiensis, and other species in the genus Metschnikowia.
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Affiliation(s)
- Gaëlle Marinoni
- Department of Plant Biology, University of Western Ontario, London, Ont., Canada N6A 5B7
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113
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Lachance MA, Daniel HM, Meyer W, Prasad GS, Gautam SP, Boundy-Mills K. The D1/D2 domain of the large-subunit rDNA of the yeast species is unusually polymorphic. FEMS Yeast Res 2003; 4:253-8. [PMID: 14654429 DOI: 10.1016/s1567-1356(03)00113-2] [Citation(s) in RCA: 76] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
Abstract
Ten different versions of the D1/D2 divergent domain of the large-subunit ribosomal DNA were identified among interbreeding members of the yeast species Clavispora lusitaniae. One major polymorphism, located in a 90-bp structural motif of the D2 domain, exists in two versions that differ by 32 base substitutions. Three other polymorphisms consist of a two-base substitution, a two-base deletion, and a single-base deletion, respectively. The polymorphisms are independent of one another and of the two mating types, indicating that the strains studied belong to a single, sexually active Mendelian population. Several strains were heterogeneous for one or more of the polymorphisms, and one strain was found to be automictic and capable of producing asci on its own by isogamous conjugation or by bud-parent autogamy. These observations suggest circumspection in the use of sequence divergence as the principal criterion for delimiting yeast species.
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Affiliation(s)
- M A Lachance
- Department of Biology, University of Western Ontario, N6A 5B7, London, ON, Canada.
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114
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Abstract
Herman Jan Phaff's legacy includes pioneering work on the yeast cell envelope and the application of molecular approaches to yeast systematics. Clearly, his interest and knowledge spanned the whole gamut of yeast biology. Yet, his most original and most heartfelt contribution was to our understanding of the position occupied by yeasts in nature. This view developed through the juxtaposition of his childhood exposure to industrial fermentations and his training in the tradition of Beijerinck's Delft School of Microbiology. Through some of Phaff's recent writings, I have attempted to formulate the themes or principles that were implicit to his ecological thinking. Six focal points emerge. (1) Yeasts in themselves are a sufficient object of study. (2) A clear idea of a yeast community cannot be obtained unless the yeast species are correctly identified. (3) Ecologically meaningful conclusions require an adequate sample size. (4) The bacteriological dictum "everything is everywhere" is a poor account of yeast distributions. (5) The habitat is the cornerstone of yeast ecology. (6) Ecology is the most exciting aspect of yeast biology.
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Affiliation(s)
- Marc-André Lachance
- Department of Biology, University of Western Ontario, London, Ontario, N6A 5B7, Canada.
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115
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Teixeira ACP, Marini MM, Nicoli JR, Antonini Y, Martins RP, Lachance MA, Rosa CA. Starmerella meliponinorum sp. nov., a novel ascomycetous yeast species associated with stingless bees. Int J Syst Evol Microbiol 2003; 53:339-343. [PMID: 12656193 DOI: 10.1099/ijs.0.02262-0] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Thirty-two strains of the novel species Starmerella meliponinorum sp. nov. were isolated from various substrates associated with three stingless bee species (tribe Meliponini) in Brazil and one in Costa Rica. The strains were found in garbage pellets (faecal material, discarded pollen or food, etc.), pollen provisions, adult bees, honey and propolis of Tetragonisca angustula, in honey from Melipona quadritasciata and in adults of Melipona rufiventris and Trigona fulviventris. The sequence of the D1/D2 domains of the large-subunit rDNA showed that the novel species belongs to the Starmerella clade and is most closely related to Candida etchellsii, although the two differ in their sequences by 7% base substitutions. S. meliponinorum is homothallic and assimilates few carbon sources. Nitrate is utilized as a sole nitrogen source. The type strain of S. meliponinorum is strain UFMG-01-J26.1T (=CBS 9117T).
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Affiliation(s)
- Ana C P Teixeira
- Departamento de Microbiologia - ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Marjorie M Marini
- Departamento de Microbiologia - ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Jacques R Nicoli
- Departamento de Microbiologia - ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Yasmine Antonini
- Departamento de Biologia Geral - ICB, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Rogerio P Martins
- Departamento de Biologia Geral - ICB, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
| | - Marc-André Lachance
- Department of Plant Sciences, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Carlos A Rosa
- Departamento de Microbiologia - ICB, CP 486, Universidade Federal de Minas Gerais, Belo Horizonte, MG, 31270-901, Brazil
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116
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Hong SG, Bae KS, Herzberg M, Titze A, Lachance MA. Candida kunwiensis sp. nov., a yeast associated with flowers and bumblebees. Int J Syst Evol Microbiol 2003; 53:367-372. [PMID: 12656196 DOI: 10.1099/ijs.0.02200-0] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A novel asexual ascomycetous yeast, Candida kunwiensis (SG99-26T = KCTC 17041T = CBS 9067T), was isolated from sweet potato (Ipomoea batatas) flowers in Korea and from the body surface of pollinating bumblebees in Germany. Comparative analysis of the D1/D2 domain of 26S rDNA of all available sequences for ascomycetous yeasts showed that the novel species was phylogenetically related to the genus Metschnikowia, but the sequence similarity was low. Morphologically and physiologically, C. kunwiensis in many ways resembles Metschnikowia pulcherrima, but can be distinguished from this species by its ability to assimilate lactic acid and its inability to produce pulcherrimin.
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Affiliation(s)
- Soon Gyu Hong
- Korean Collection for Type Cultures, Korea Research Institute of Bioscience & Biotechnology, no. 52, Oun-dong, Yusong, Taejon 305-333, Republic of Korea
| | - Kyung Sook Bae
- Korean Collection for Type Cultures, Korea Research Institute of Bioscience & Biotechnology, no. 52, Oun-dong, Yusong, Taejon 305-333, Republic of Korea
| | - Michel Herzberg
- Plant Ecology, Department of Biology, Philipps University, Marburg, Karl-von-Frisch-Straße, 35043 Marburg, Germany
| | - Andreas Titze
- Plant Ecology, Department of Biology, Philipps University, Marburg, Karl-von-Frisch-Straße, 35043 Marburg, Germany
| | - Marc-André Lachance
- Department of Plant Sciences, University of Western Ontario, London, Ontario, Canada N6A 5B7
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117
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Abstract
Yeast species in the genus Malassezia are lipophilic with the exception of Malassezia pachydermatis. During a study of the occurrence of Malassezia species in the external ear of 964 cattle and 6 dogs in Minas Gerais, Brazil, six lipid-dependent isolates could not be identified to known species. Four isolates came from healthy cows, one from a cow with otitis, and one from a healthy dog. When tested with Tweens and Cremophor EL as single sources of lipids, the strains grew on all sources except Cremophor EL. None of the six strains hydrolyzed esculin, and all produced catalase. Pigment production from tryptophan was variable. Partial large subunit rRNA sequences were obtained for two isolates that remained viable in culture. The strain from the cow with otitis was identified as a lipid-dependent variant of M. pachydermatis, and the strain from the dog was an atypical variant of Malassezia furfur.
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Affiliation(s)
- Eduardo Robson Duarte
- Department of Microbiology, Biological Sciences Institute, Federal University of Minas Gerais, Brazil
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118
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Abstract
Two new haplontic heterothallic species of Metschnikowia were discovered in flowers and associated beetles. Metschnikowia arizonensis was recovered from flowers of cholla cactus (Opuntia echinocarpa) and a specimen of Carpophilus sp. (Coleoptera: Nitidulidae) found in these flowers, in Arizona. Metschnikowia dekortorum was isolated in specimens of the nitidulid beetle Conotelus sp. captured in flowers of two species of Ipomoea in northwestern Guanacaste Province, Costa Rica. The sexual cycle of these yeasts is typical of the large-spored Metschnikowia species, but the asci and spores are intermediate in size between these and other members of the genus. The physiology is consistent with that of most Metschnikowia species except that both species fail to utilize lysine as sole nitrogen source. Also, M. arizonensis utilizes fewer carbon compounds than most species and exhibits considerable variability among strains at this level. Partial ribosomal DNA large-subunit (D1/D2) sequences suggest that M. arizonensis and M. dekortorum are moderately related sister species whose positions are intermediate between the large-spored species Metschnikowia and Metschnikowia hibisci. The type cultures are: M. arizonensis, strains UWO(PS)99-103.3.1=CBS 9064=NRRL Y-27427 (h(+), holotype) and UWO(PS)99-103.4=CBS 9065=NRRL Y-27428 (h(-), isotype); and M. dekortorum, strains UWO(PS)01-142b3=CBS 9063=NRRL Y-27429 (h(+), holotype) and UWO(PS)01-138a3=CBS 9062=NRRL Y-27430 (h(-), isotype).
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Affiliation(s)
- Marc-André Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada N6A 5B7.
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Lachance MA, Klemens JA, Bowles JM, Janzen DH. The yeast community of sap fluxes of Costa Rican Maclura (Chlorophora) tinctoria and description of two new yeast species, Candida galis and Candida ortonii. FEMS Yeast Res 2001; 1:87-92. [PMID: 12702353 DOI: 10.1111/j.1567-1364.2001.tb00019.x] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
We report on the yeast community associated with sap fluxes of Maclura tinctoria, family Moraceae, in the dry forest of the Area de Conservación Guanacaste, Costa Rica. Eleven samples yielded seven hitherto undescribed ascomycetous yeasts in the genera Candida and Myxozyma. We describe the two most abundant as new species. Candida galis utilizes very few carbon compounds limited to some alcohols and acids. Analysis of rDNA sequences suggests that it occupies a basal position with respect to the Pichia anomala clade, with no obvious sister species. Candida ortonii is also restricted in nutritional breadth, and growth is generally very slow. It is a sister species to Candida nemodendra. The type cultures are: C. galis, strain UWO(PS)00-159.2=CBS 8842; and C. ortonii, strain UWO(PS)00-159.3=CBS 8843.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, ON, Canada.
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120
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Lachance MA, Bowles JM, Chavarría Díaz MM, Janzen DH. Candida cleridarum, Candida tilneyi and Candida powellii, three new yeast species isolated from insects associated with flowers. Int J Syst Evol Microbiol 2001; 51:1201-1207. [PMID: 11411688 DOI: 10.1099/00207713-51-3-1201] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Three new asexual yeast species were isolated from various floricolous insects. Candida cleridarum sp. nov. was the dominant species in clerid beetles collected in flowers of various cacti in Arizona and Southern California. The sequence of the D1D2 domains of the large-subunit rDNA showed that it is a sister species to Candida fragi (0.9% base difference), a yeast isolated once from fermenting strawberries. Candida tilneyi sp. nov. and Candida powellii sp. nov. were recovered from bees and from nitidulid beetles in flowers of two species of morning glory (Ipomoea) in north-western Costa Rica. C. tilneyi sp. nov. is most closely related to Candida geochares, but differs in the D1D2 sequence by 4.7% base substitutions. C. powellii sp. nov. is a relative of Candida batistae and Candida floricola, showing sequence differences of 5.9 and 6.9%, respectively. In all cases, the new species are phenotypically similar to their nearest relatives, but are sufficiently different to allow conventional identification. The type strains are C. cleridarum strain UWO(PS) 99-101.1T ( = CBS 8793T), C. tilneyi strain UWO(PS) 99-325.1T ( = CBS 8794T) and C. powellii strain UWO(PS) 99-325.3T ( = CBS 8795T).
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Abstract
We studied specific yeast communities vectored by beetles, drosophilids, and bees that visit ephemeral flowers, mostly in the genus Hibiscus and in the families Convolvulaceae and Cactaceae, in the Neotropical, Nearctic, and Australian biogeographic regions. The communities consist mostly of yeasts in four clades centered around the genera Metschnikowia, Kodamaea, Wickerhamiella, and Starmerella. The largest geographic discontinuity occurs as a function of the nitidulid beetle species that dominate the non-pollinator insect visitors of the flowers. This partitions the New World, where the dominant beetle is in the genus Conotelus, from the Australian biogeographic region, dominated by species of Aethina. Distinct but sympatric insects may also carry radically different yeast communities.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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122
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Starmer WT, Phaff HJ, Ganter PF, Lachance MA. Candida orba sp. nov., a new cactus-specific yeast species from Queensland, Australia. Int J Syst Evol Microbiol 2001; 51:699-705. [PMID: 11321117 DOI: 10.1099/00207713-51-2-699] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A new species of yeast from decaying cladodes of Opuntia cactus, Candida orba, is described. This species is a member of a four-species clade of cactophilic yeasts. The new species has only been found in one region of Queensland, Australia, where it was presumably introduced during attempts to eradicate prickly pear cactus. DNA-DNA relatedness, phylogenetic analysis, physiological differences, killer-sensitivity profiles and mating reactions establish the distinctness of the taxon as a new species. C. orba is most closely related to Phaffomyces thermotolerans, a species found associated with columnar cacti in the North American Sonoran Desert. The type strain of C. orba, isolated from rotting cladodes of Opuntia stricta in the State of Queensland, Australia, is strain UCD-FST 84-833.1T (= CBS 8782T = NRRL Y-27336T = ATCC MYA-341). Only the h- mating type of the species has been recovered. The lack of the opposite mating type could be the result of a bottleneck during its introduction to Australia. The original geographic/host distribution of this species in the Americas is unknown.
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123
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Lachance MA, Bowles JM, Kwon S, Marinoni G, Starmer WT, Janzen DH. Metschnikowia lochheadii and Metschnikowia drosophilae, two new yeast species isolated from insects associated with flowers. Can J Microbiol 2001; 47:103-9. [PMID: 11261488 DOI: 10.1139/w00-130] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Two new haplontic heterothallic species of Metschnikowia were isolated from floricolous insects and flowers. Metschnikowia lochheadii was recovered from insects found in various flowers on the Hawaiian Islands of Kauai and Maui, and from Conotelus sp. (Coleoptera: Nitidulidae) in northwestern Guanacaste Province, Costa Rica. The morphology, physiology, and sexual cycle are typical of the large-spored Metschnikowia species, and the partial ribosomal DNA large subunit (D1D2) sequences suggest that the new species is most closely related to Candida ipomoeae. Metschnikowia lochheadii is nearly indistinguishable from its ascogenous relatives and conjugates freely with Metschnikowia continentalis, forming sterile asci. It also exhibits asymmetric mating with Metschnikowia hawaiiensis. Metschnikowia drosophilae was found in morning glory (Ipomoea sp.) flowers and associated Drosophila bromeliae on Grand Cayman Island. Its nutritional profile is atypical of the genus, being the only species that does not utilize sucrose or maltose as carbon sources, and one of the few that does not utilize melezitose. D1D2 sequences show that Metschnikowia drosophilae is a sister species to Candida torresii, to which it bears considerable similarity in nutritional profile. The type cultures are: Metschnikowia lochheadii, strains UWO(PS)00-133.2 = CBS 8807 (h+, holotype) UWO(PS)99-661.1 = CBS 8808 (h-, isotype); and Metschnikowia drosophilae, strains UWO(PS)83-1135.3 = CBS 8809 (h+, holotype) and UWO(PS)83-1143.1 = CBS 8810 (h-, isotype).
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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124
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Abstract
A large number of isolates previously referred to as members of the 'Sporopachydermia cereana species complex' were examined by various DNA characterization methods, leading to the conclusion that the complex is in fact made up of 10 species, one of which contains three varieties. The sequences of the internal transcribed spacer (ITS) region and the D1/D2 divergent domains of the large subunit rDNA were determined for representatives of each taxon and specific primers based on differences in the ITS were designed for rapid identification of five of the taxa. Whereas the data provide additional elements for the calibration of the ITS as a criterion for species delineation, the emerging pattern is that the ITS region does not function as well as the D1/D2 domains as an evolutionary clock. Some taxa appear to be specific for the geographical regions where they were isolated, and the distribution of many taxa is mutually exclusive.
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Lachance MA, Bowles JM, Kwon S, Marinoni G, Starmer WT, Janzen DH. Metschnikowia lochheadii and Metschnikowia drosophilae, two new yeast species isolated from insects associated with flowers. Can J Microbiol 2001. [DOI: 10.1139/cjm-47-2-103] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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126
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Lachance MA, Bowles JM, Mueller C, Starmer WT. On the biogeography of yeasts in the Wickerhamiella clade and description of Wickerhamiella lipophila sp. nov., the teleomorph of Candida lipophila. Can J Microbiol 2000; 46:1145-8. [PMID: 11142405 DOI: 10.1139/w00-108] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
We describe the new yeast species Wickerhamiella lipophila, the teleomorph of Candida lipophila, a haploid heterothallic yeast previously isolated from insects associated with morning glories in Hawaii. Both mating types were recovered in the eastern region of Maui, and a single strain was found in the Waimea region of Kauai. We reexamined the mating compatibility of the several strains of Candida lipophila previously collected on the island of Hawaii and found them to be fertile mating types that had been overlooked because of the unpredictability of mating and ascus formation. The type culture of Candida lipophila [UWO(PS)91-681.3 = CBS 8458, h+] is transferred to the genus Wickerhamiella, and strain UWO(PS)00-340.1 (CBS 8812, h-) is designated as isotype. Also found on Maui and Kauai were strains of Candida drosophilae that produced a strong extracellular protease. An update on the global distribution of members of the Wickerhamiella clade is given.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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127
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Abstract
Yeast predation was studied with respect to the range of its distribution among ascomycetous yeasts, the range of yeast species that can be affected, and nutritional aspects of the phenomenon. The yeasts identified as predators belong to the Saccharomycopsis clade as defined on the basis of rDNA sequence relatedness. The 11 recognized species in the clade, plus three undescribed but related Candida species, were shown to be incapable of utilizing sulfate as sole source of sulfur, and all but two (Saccharomycopsis capsularis and Saccharomycopsis vini) were observed to penetrate and kill other yeasts under some conditions. Other unrelated sulfate transport-deficient yeasts (strains in the genera Pichia and Candida and the two known species of Starmera) are not predacious. The predacious species vary considerably as to the optimal environmental conditions that favour predation. Some are inhibited by the presence of rich nitrogenous nutrients, organic sulfur compounds, or higher concentrations of ammonium nitrogen, whereas other species may be stimulated under the same conditions. An attempt was made to correlate prey susceptibility to the excretion of substances that stimulate the growth of predators, but no correlation was detected between the two phenomena. The range of susceptible prey covers both ascomycetes and basidiomycetes, and includes Schizosaccharomyces pombe, which was previously thought to be immune. The achlorophyllous alga Prototheca zopfii is not killed by predacious yeasts, but the initial steps of penetration have been observed in some cases. Predacious species attack other predacious species, and in some cases, young cultures may penetrate older cultures of the same strain.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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128
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Abstract
Candida guilliermondii UFMG-Y65, isolated from a gold mine, was able to utilize different nitriles and the corresponding amides as sole source of nitrogen, at concentrations up to 2 M. Resting cells cultivated on YCB-acetonitrile medium showed nitrile hydrolyzing enzyme activities against acrylonitrile and benzonitrile. These enzymes were inducible and intracellular; the optimum pH was 7.0-8.0, and the optimum temperature 25 degrees C-30 degrees C. Liquid chromatographic analysis indicated that C. guilliermondii UFMG-Y65 metabolized 12 mM benzonitrile to 11 mM benzoic acid and 10 mM acrylonitrile to 7.9 mM acrylic acid. The results suggest that C. guilliermondii UFMG-Y65 may be useful for the bioproduction of amides and acids, and for the bioremediation of environments contaminated with nitriles.
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Affiliation(s)
- J C Dias
- Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
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129
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Lachance MA, Starmer WT, Bowles JM, Phaff HJ, Rosa CA. Ribosomal DNA, species structure, and biogeography of the cactophilic yeast Clavispora opuntiae. Can J Microbiol 2000; 46:195-210. [PMID: 10749533 DOI: 10.1139/w99-130] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The ribosomal DNA of the cactophilic yeast species Clavispora opuntiae was studied in order to clarify the global distribution of the yeast. Over 500 strains, including isolates from several new localities worldwide, were characterized by rDNA restriction mapping. An unusual restriction pattern previously encountered only in one strain, from Conception Island in the Bahamas, was found in several Brazilian isolates. Sequences of the D1/D2 and D7/D8 divergent domains of the large subunit (LSU) and of the intergenic spacers (IGS) confirmed that these strains represent a genetically distinct variety of Clavispora opuntiae. This divergence had previously been hypothesized on the basis of reduced genetic recombination in inter-varietal crosses and the presence of a polymorphic ApaI restriction site located in the LSU. The exact position of the ApaI site in the D8 divergent domain and the nature of the variation that it reveals were determined. The complete sequences of 12 intergenic spacers clarified the significance of the species-wide variation uncovered by restriction mapping. Most of the polymorphic sites occur in the IGS1 and IGS2 regions, on either side of the 5S gene, and the variation is largely due to differences in the numbers and the sequences of internal repeats. Two other polymorphic sites are located in the external transcribed spacer (ETS) region. The reliability of various sites as indicators of overall spacer sequence divergence differed from one case to another. Variety-specific probes were devised and used to screen 120 strains for the presence of recombinant rDNA spacers. Three strains gave ambiguous results, but these did not constitute evidence that inter-varietal recombination has taken place in nature. The hypothesis that the global movement of Clavispora opuntiae has been influenced by the worldwide biological control of prickly pear with Cactoblastis cactorum, a moth of Argentinian origin, has received additional support from the demonstration that Argentinian strains have rDNAs similar to those found where the moth has been introduced. A dramatic founder effect was identified in a yeast population collected in cacti (Maui, Hawaii) in a site where the moth had been recently introduced.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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130
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Lachance MA, Bowles JM, Mueller C, Starmer WT. On the biogeography of yeasts in the Wickerhamiella clade and description of Wickerhamiella lipophila sp. nov., the teleomorph of Candida lipophila. Can J Microbiol 2000. [DOI: 10.1139/cjm-46-12-1145] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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131
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Lachance MA, Starmer WT, Bowles JM, Phaff HJ, Rosa CA. Ribosomal DNA, species structure, and biogeography of the cactophilic yeast Clavispora opuntiae. Can J Microbiol 2000. [DOI: 10.1139/cjm-46-3-195] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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132
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Dias JC, Rezende RP, Rosa CA, Lachance MA, Linardi VR. Enzymatic degradation of nitriles by a <i>Candida guilliermondii</i> UFMG-Y65. Can J Microbiol 2000. [DOI: 10.1139/cjm-46-6-525] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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133
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Lachance MA, Bowles JM, Starmer WT, Barker JS. Kodamaea kakaduensis and Candida tolerans, two new ascomycetous yeast species from Australian Hibiscus flowers. Can J Microbiol 1999; 45:172-7. [PMID: 10380650 DOI: 10.1139/w98-225] [Citation(s) in RCA: 154] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Two new yeast species were isolated from flowers of Hibiscus species in Eastern and Northern Australia. Kodamaea kakaduensis is heterothallic, haploid, and similar to other Kodamaea species and to Candida restingae. Buds are often produced on short protuberances, and a true mycelium is formed. The new species differs from others by the assimilation of trehalose, melezitose, and xylitol, and is reproductively isolated. The cells of Candida tolerans are small and a pseudomycelium is formed. The carbon and nitrogen assimilation pattern is reminiscent of that of Zygosaccharomyces rouxii but the two are not closely related. Sequences of the D1/D2 domain of large subunit ribosomal DNA confirm the membership of K. kakaduensis in the genus Kodamaea and indicate that C. tolerans belongs to the Clavispora-Metschnikowia clade, with a moderate relatedness to Candida mogii. The type strains are: K. kakaduensis, UWO(PS)98-119.2 (h+, holotype, CBS 8611) and UWO(PS)98-117.1 (h-, isotype, CBS 8612); and C. tolerans, UWO(PS)98-115.5 (CBS 8613).
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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134
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Lachance MA, Bowles JM, Starmer WT, Barker JSF. Kodamaea kakaduensis and Candida tolerans, two new ascomycetous yeast species from Australian Hibiscus flowers. Can J Microbiol 1999. [DOI: 10.1139/cjm-45-2-172] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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135
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Rosa CA, Lachance MA, Starmer WT, Barker JS, Bowles JM, Schlag-Edler B. Kodamaea nitidulidarum, Candida restingae and Kodamaea anthophila, three new related yeast species from ephemeral flowers. Int J Syst Bacteriol 1999; 49 Pt 1:309-18. [PMID: 10028276 DOI: 10.1099/00207713-49-1-309] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Three new yeast species were discovered during studies of yeasts associated with ephemeral flowers in Brazil, Australia and Hawaii. Their physiological and morphological similarity to Kodamaea (Pichia) ohmeri suggested a possible relationship to that species, which was confirmed by rDNA sequencing. Kodamaea nitidulidarum and Candida restingae were found in cactus flowers and associated nitidulid beetles in sand dune ecosystems (restinga) of South-eastern Brazil. Over 350 strains of Kodamaea anthophila were isolated from Hibiscus and morning glory flowers (Ipomoea spp.) in Australia, and from associated nitidulid beetles and Drosophila hibisci. A single isolate came from a beach morning glory in Hawaii. Expansion of the genus Kodamaea to three species modified the existing definition of the genus only slightly. The type and isotype strains are as follows: K. nitidulidarum strains UFMG96-272T (h+; CBS 8491T) and UFMG96-394I (h-; CBS 8492I); Candida restingae UFMG96-276T (CBS 8493T); K. anthophila strains UWO(PS)95-602.1T (h+; CBS 8494T), UWO(PS)91-893.2I (h-; CBS 8495I) and UWO(PS)95-725.1I (h-; CBS 8496I).
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Affiliation(s)
- C A Rosa
- Departamento de Microbiologia-ICB, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
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136
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Rosa CA, Lachance MA. The yeast genus Starmerella gen. nov. and Starmerella bombicola sp. nov., the teleomorph of Candida bombicola (Spencer, Gorin & Tullock) Meyer & Yarrow. Int J Syst Bacteriol 1998; 48 Pt 4:1413-7. [PMID: 9828444 DOI: 10.1099/00207713-48-4-1413] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Seven strains of a heterothallic haploid yeast species were isolated from flowers of Calystegia sepium (hedge bindweed, Convolvulaceae) and associated sap beetles of the genus Conotelus. Conjugation was observed between some of the isolates and the type strain of Candida bombicola, resulting in evanescent asci with one ascospore with a convoluted surface. The sequences of the D1/D2 variable domain of the large subunit of the rDNAs of three strains differed by only one or two bases from that of the type strain. The new genus Starmerella, with the single species Starmerella bombicola, is proposed to accommodate the teleomorph of C. bombicola. The designated isotype is strain UWO(PS)97-118I (H-; CBS 8451I).
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Affiliation(s)
- C A Rosa
- Departamento de Microbiología-ICB, Universidade Federal de Minas Gerais, Belo Horizonte-MG, Brazil
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Lachance MA, Rosa CA, Starmer WT, Schlag-Edler B, Barker JS, Bowles JM. Wickerhamiella australiensis, Wickerhamiella cacticola, Wickerhamiella occidentalis, Candida drosophilae and Candida lipophila, five new related yeast species from flowers and associated insects. Int J Syst Bacteriol 1998; 48 Pt 4:1431-43. [PMID: 9828447 DOI: 10.1099/00207713-48-4-1431] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Five new yeast species, Wickerhamiella australiensis, Wickerhamiella cacticola, Wickerhamiella occidentalis, Candida drosophilae and Candida lipophila, are described to accommodate isolates recovered from flowers and floricolous insects of Australian Hibiscus trees, cosmopolitan morning glories (Ipomoea spp.) and Brazilian cereoid cacti. The new Wickerhamiella species are heterothallic, occur in the haploid condition and are clearly separated reproductively from one another. Although they exhibit little physiological variation, they are easily delineated from Wickerhamiella domercqiae, the only species known previously, by their resistance to cycloheximide and the production of strong extracellular lipases. C. drosophilae and C. lipophila share the latter property, but unlike the Wickerhamiella species, they fail to utilize nitrate as sole nitrogen source. PFGE indicates that these yeasts have an unusually low number of chromosomes. The large-subunit rDNA (D1/D2) sequences demonstrate a close relationship between the five species and Candida vanderwaltii and Candida azyma. Their relationship with W. domercqiae is more distant, but all share, with some other Candida species, a single monophyletic clade. The type and isotype strains are as follows: W. australiensis strains UWO(PS)95-604.3T (h+; CBS 8456T) and UWO(PS)95-631.3I (h-; CBS 8457I); W. cacticola strains UFMG96-267T (h+; CBS 8454T) and UFMG96-381I (h-; CBS 8455I); W. occidentalis strains UWO(PS)91-698.4T (h+; CBS 8452T) and UFMG96-212I (h-; CBS 8453I); C. drosophilae UWO(PS)91-716.3T (CBS 8459T); and C. lipophila UWO(PS)91-681.3T (CBS 8458T).
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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Lachance MA, Rosa CA, Starmer WT, Bowles JM. Candida ipomoeae, a new yeast species related to large-spored Metschnikowia species. Can J Microbiol 1998; 44:718-22. [PMID: 9830103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Abstract
Numerous strains of an unusual asexual yeast species were isolated from flowers of morning glory (Ipomoea spp., Convolvulaceae) and associated drosophilids and sap beetles of the genus Conotelus sampled in Hawaii and in Brazil. The nutritional profile of this yeast is similar to those of Metschnikowia hawaiiensis and Metschnikowia continentalis, which share the same habitats. The cells are large, hydrophobic, and tend to remain attached after budding, causing the colonies on agar media to have a convoluted appearance, reminiscent of popcorn. The sequences of the D1/D2 domain of large subunit rDNAs of strains from three different localities confirmed that a single species is involved, and that it is related to large-spored Metschnikowia species. The type strain is UWO(PS)91-672.1 (CBS 8466).
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada.
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Lachance MA, Rosa CA, Starmer WT, Bowles JM. Candida ipomoeae, a new yeast species related to large-spored Metschnikowia species. Can J Microbiol 1998. [DOI: 10.1139/w98-067] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Numerous strains of an unusual asexual yeast species were isolated from flowers of morning glory (Ipomoea spp., Convolvulaceae) and associated drosophilids and sap beetles of the genus Conotelus sampled in Hawaii and in Brazil. The nutritional profile of this yeast is similar to those of Metschnikowia hawaiiensis and Metschnikowia continentalis, which share the same habitats. The cells are large, hydrophobic, and tend to remain attached after budding, causing the colonies on agar media to have a convoluted appearance, reminiscent of popcorn. The sequences of the D1/D2 domain of large subunit rDNAs of strains from three different localities confirmed that a single species is involved, and that it is related to large-spored Metschnikowia species. The type strain is UWO(PS)91-672.1 (CBS 8466).Key words: Candida ipomoeae, yeast, new species, rDNA.
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Lachance MA, Rosa CA, Starmer WT, Schlag-Edler B, Baker JSF, Bowles JM. Metschnikowia continentalisvar.borealis,Metschnikowia continentalisvar.continentalis, andMetschnikowia hibisci, new heterothallic haploid yeasts from ephemeral flowers and associated insects. Can J Microbiol 1998. [DOI: 10.1139/w97-148] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Several strains of three new taxa of haploid heterothallic yeasts have been isolated from various ephemeral flowers and associated insects in North and South America and Australia. Metschnikowia continentalis comprises two varieties and is a close relative of Metschnikowia hawaiiensis. Like the latter, it produces giant ascospores and lives in association with the insects that colonize flowers of the family Convolvulaceae. These species exhibit an unusual asymmetrical mating, but their rare asci are sterile. The varieties of M. continentalis undergo unlimited mating, but ascospores are rarely formed. Metschnikowia continentalis var. continentalis was isolated in central Brazil and is thought to occur across South America.Metschnikowia continentalis var. borealis was recovered in the Great Lakes area and may represent a North American population. Metschnikowia hibisci was found in the flowers and insects of various Hibiscus species in the Australian states of New South Wales and Queensland but appeared to be absent in members of the Convolvulaceae growing in the same areas. The latter forms intermediate-sized ascospores and one of its mating types forms conjugation tubes in the presence of cells of other Metschnikowia species. The three taxa share with M. hawaiiensis a large deletion in the D2 region of their large ribosomal DNA subunit, but in M. hibisci, the variable domain of the D2 region shares little, if any, sequence similarity with others. The type cultures are as follows:M. continentalis var. continentalis strains UFMG96-173 (h+, CBS8429) and UFMG96-179 (h-, CBS8430); M. continentalis var. borealis strains UWO(PS)96-104.2 (h+, CBS 8431) and UWO(PS)96-101.1 (h-, CBS8432); and M. hibisci strains UWO(PS)95-797.2 (h+, CBS8433) and UWO(PS)95-805.1 (h-, CBS8434).Key words: Metschnikowia, yeast, Convolvulaceae, Hibiscus, geographic speciation.
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Abstract
Yeasts and filamentous fungi associated with smooth (non-lenticel) and lenticel bark of young and scaffold branches of peach (Prunus persica (L.) Batsch) were monitored using bark washing and direct or impression plating techniques and scanning electron microscopy during potential Cystospora canker infection periods. Total populations of fungi were high in the fall but dropped in the winter and increased during the spring. Yeasts and yeast-like fungi predominated in the spring and fall samples. The principal yeasts were Basidiomycetes in the form genera Cryptococcus, Rhodotorula, and Sporobolomyces. The yeast-like fungi were Aureobasidium and Taphrina. The principal filamentous fungi were in the form genera Alternaria, Epicoccum, Cladosporium, Coniothyrium, and Libertella. The canker pathogens, Leucostoma persoonii (Nits.) Höhn. and Leucostoma cincta (Pers. & Fr.) Höhn., were observed mainly in the spring sampling. Lenticels supported greater fungal populations than smooth (non-lenticel) bark surfaces. The impact of fungal epiphytes, particularly the yeasts, on the potential biological control of peach canker is discussed.Key words: Cytospora canker, mycoflora, yeast, bark, biological control, fungal epiphyte.
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Lachance MA, Rosa CA, Starmer WT, Bowles JM. Candida ipomoeae, a new yeast species related to large-spored Metschnikowia species. Can J Microbiol 1998. [DOI: 10.1139/cjm-44-8-718] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Lachance MA, Rosa CA, Starmer WT, Schlag-Edler B, Baker JSF, Bowles JM. <i>Metschnikowia continentalis </i>var. <i>borealis</i>, <i>Metschnikowia continentalis </i>var. <i>continentalis</i>, and <i>Metschnikowia hibisci</i>, new heterothallic haploid yeasts from ephemeral flowers and associated insects. Can J Microbiol 1998. [DOI: 10.1139/cjm-44-3-279] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Abstract
Haustorium-mediated predation was observed in seven yeast species. Arthroascus javanensis, Botryoascus synnaedendrus, Guilliermondella selenospora, Saccharomycopsis fibuligera, and three hitherto unknown species penetrate and kill other yeasts. These yeasts share an unusual requirement for organic sulphur. One isolate recovered from Australian Hibiscus was studied in detail and found to attack a broad range of prey species, including ascomycetous and basidiomycetous yeasts as well as moulds. Predation was most effective when growth was on a solid surface and the medium was poor in complex nutrients. Organic sulphur (exemplified by methionine) was identified as a key factor. It serves as a nutritional benefit to the predator and, depending on the concentration, acts as either an inhibitor of predation or possibly a signal for detection of prey. Sampling of a yeast habitat with a medium selective for selenium-resistant yeasts indicated that auxotrophic and predacious yeasts might be more widespread than anticipated.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada
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Abstract
Fresh and cooked agave, Drosophila spp., processing equipment, agave molasses, agave extract, and fermenting must at a traditional tequila distillery (Herradura, Amatitan, Jalisco, México) were studied to gain insight on the origin of yeasts involved in a natural tequila fermentations. Five yeast communities were identified. (1) Fresh agave contained a diverse mycobiota dominated by Clavispora lusitaniae and an endemic species, Metschnikowia agaveae. (2) Drosophila spp. from around or inside the distillery yielded typical fruit yeasts, in particular Hanseniaspora spp., Pichia kluyveri, and Candida krusei. (3) Schizosaccharomyces pombe prevailed in molasses. (4) Cooked agave and extract had a considerable diversity of species, but included Saccharomyces cerevisiae. (5) Fermenting juice underwent a gradual reduction in yeast heterogeneity. Torulaspora delbrueckii, Kluyveromyces marxianus, and Hanseniaspora spp. progressively ceded the way to S. cerevisiae, Zygosaccharomyces bailii, Candida milleri, and Brettanomyces spp. With the exception of Pichia membranaefaciens, which was shared by all communities, little overlap existed. That separation was even more manifest when species were divided into distinguishable biotypes based on morphology or physiology. It is concluded that crushing equipment and must holding tanks are the main source of significant inoculum for the fermentation process. Drosophila species appear to serve as internal vectors. Proximity to fruit trees probably contributes to maintaining a substantial Drosophila community, but the yeasts found in the distillery exhibit very little similarity to those found in adjacent vegetation. Interactions involving killer toxins had no apparent direct effects on the yeast community structure.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada
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Lachance MA, Gilbert DG, Starmer WT. Yeast communities associated with Drosophila species and related flies in an eastern oak-pine forest: a comparison with western communities. J Ind Microbiol 1995; 14:484-94. [PMID: 7662291 DOI: 10.1007/bf01573963] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Intestinal yeast mycobiota were studied in 14 species of Drosophila and in the drosophilid species Chymomyza amoena, captured at Pinery Provincial Park, Ontario. Over 56 yeast species, some undescribed, were isolated. These yeast communities were compared with those from two similar surveys conducted in western portions of North America. The community structures were influenced significantly by the habitat rather than phylogeny of the flies. Geographic separation was a factor affecting yeast taxa frequencies in the fly species, but it was largely overshadowed by ecological factors when the communities were described physiologically. The notion that habitats are filled by yeasts which add up to a suitable physiological potential, more or less independently of their taxonomic affinities, was thus confirmed.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada
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Phaff HJ, Starmer WT, Lachance MA, Ganter PF. Candida caseinolytica sp. nov., a new species of yeast occurring in necrotic tissue of Opuntia and Stenocereus species in the southwestern United States and Baja California, Mexico. Int J Syst Bacteriol 1994; 44:641-5. [PMID: 7981095 DOI: 10.1099/00207713-44-4-641] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
We describe Candida caseinolytica, a new yeast species which occurs in rotting tissues of opuntias and other cacti in the North American Sonoran Desert and a few other localities. This small-celled, slowly growing yeast does not ferment any sugar and assimilates a limited number of carbon compounds, including 2- and 5-ketogluconic acids. It exhibits strong extracellular proteolytic activity on casein at pH 6.5, but gelatin is not hydrolyzed or is only weakly hydrolyzed by a few strains. The type strain of C. caseinolytica is strain UCD-FST 83-438.3 (= ATCC 90546 = CBS 7781).
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Affiliation(s)
- H J Phaff
- Department of Food Science and Technology, University of California, Davis 95616
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Lachance MA, Nair P, Lo P. Mating in the heterothallic haploid yeast Clavispora opuntiae, with special reference to mating type imbalances in local populations. Yeast 1994; 10:895-906. [PMID: 7985417 DOI: 10.1002/yea.320100705] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
Abstract
Mating was studied in the haploid, heterothallic yeast Clavispora opuntiae to assess the importance of nutritional, genetic, and other factors that may favour mating and recombination. Local populations of this yeast generally exhibit dramatic inequalities in mating type distributions, suggesting that mating is rare in nature even though most isolates mate freely in the laboratory. The absence of assimilable nitrogen is prerequisite to mating competence, presumably by causing G1 arrest. Maximum mating competence is found in cells entering stationary phase in nitrogen-limited media. Unlike the vast majority of mating yeasts, C. opuntiae does not appear to produce diffusible mating factors (sex pheromones), and mating-competent cells do not undergo sexual agglutination. Pairwise cell contact appears to be the only signal that triggers the sexual process in this case. In order to determine if mating type imbalances in nature are caused by reduced fertility of 'consanguine' crosses, meiotic recombination was measured in pairs of strains that varied in their genetic distances as indicated by restriction mapping. That hypothesis was rejected, as recombination efficiency decreased with increasing genetic distance. We conclude that the rarity of mating in local populations is exacerbated by the stringent physical (pairwise cell contact) and nutritional (nitrogen depletion) conditions that will allow mating to proceed. Parallels are drawn with mating patterns observed in Clavispora lusitaniae.
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Affiliation(s)
- M A Lachance
- Department of Plant Sciences, University of Western Ontario, London, Canada
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Abstract
Several strains of a new haploid, heterothallic species of Metschnikowia have been isolated from Agave tequilana var. azul in two agave-growing localities of Jalisco, Mexico. The new yeast species forms two aciculate ascospores per ascus after conjugation of enlarged and elongated compatible cells. Named after its host, Metschnikowia agaveae resembles superficially Metschnikowia hawaiiensis, but differs from the latter by some physiological and morphological characteristics. These two species exhibited no signs of sexual cross-reactivity. Strain UWO(PS)92-207.1 (h+, CBS 7744, ATCC 90148) is the type culture, and strain UWO(PS)92-210.1 (h−, CBS 7745, ATCC 90147) has been designated as isotype.Key words: agave, yeast, Metschnikowia, new species.
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