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Xia SB, Li FS, Shen X, Li X, Cheng FX, Sun CK, Guo H, Liu JJ. Correction: A photochromic zinc-based coordination polymer for a Li-ion battery anode with high capacity and stable cycling stability. Dalton Trans 2022; 51:4928. [PMID: 35274666 DOI: 10.1039/d2dt90030k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Correction for 'A photochromic zinc-based coordination polymer for a Li-ion battery anode with high capacity and stable cycling stability' by Shu-Biao Xia et al., Dalton Trans., 2018, 47, 13222-13228, DOI: 10.1039/C8DT02930J.
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Huang T, Zou SL, Shen X, Jin J, Bai J, Wu JJ, Wang L, Jiang QJ, Qu LF. [Evaluation of the level of carotid bifurcation and the morphology of extracranial internal carotid artery in patients with carotid stenosis by color doppler ultrasound and digital subtraction angiography]. ZHONGHUA YI XUE ZA ZHI 2022; 102:781-786. [PMID: 35325957 DOI: 10.3760/cma.j.cn112137-20210605-01285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Objective: To evaluate the value of color Doppler ultrasound and digital subtraction angiography (DSA) in evaluating the level of carotid bifurcation and the morphology of extracranial internal carotid artery in patients with atherosclerotic carotid stenosis. Methods: The carotid artery examination data of 186 patients with atherosclerotic carotid stenosis who underwent carotid DSA and color Doppler ultrasound in Shanghai Changzheng Hospital from July 2017 to June 2019 were retrospectively analyzed, including 154 males and 32 females, with ages ranging from 36 to 84 (66±8) years old. The correlation between the position of carotid bifurcation and the level of cervical spine, the distance from the position of carotid bifurcation to mandibular angle, the correlation of the level of bifurcation with the length of neck, and the incidence of carotid distortion were analyzed. Results: DSA showed that the most common position of carotid bifurcation was at C3 level on the left [37.3% (56/150)], and at C3-C4 level on the right [33.6% (42/125)], and the highest position was at C2 level on the left, and at C2-C3 levels on the right, while the lowest level on both sides was at C5 level. The incidence of high bifurcation of left carotid artery (C3 and above) was 46% (69/150), which was higher than that of right carotid artery [21.6% (27/125), P<0.001]. The incidence of high carotid bifurcation in men and women was 33.2% (76/229) and 43.5% (20/46), respectively, with no significant difference (P = 0.182). Carotid ultrasound showed that the distance between the left carotid bifurcation and the mandibular angle was (3.0±1.3) cm, which was shorter than that on the right [(3.4±1.2) cm] (P<0.001). The distance between carotid bifurcation and mandibular angle in men and women was (3.2±1.2) cm and (3.3±1.0) cm, respectively, with no significant difference (P = 0.093). There was no significant correlation between carotid bifurcation level and carotid length (right: r = 0.02, P = 0.091; left: r = 0.01, P = 0.927). The incidence of carotid artery distortion was 28.1% (9/32) in women and 15.6% (24/154) in men, with no significant difference (P = 0.091). The incidence of right carotid artery distortion in high bifurcation group was 59.3% (16/27), which was higher than that in non-high bifurcation group [3.1% (3/98)] (P<0.001). Likewise, the incidence of left carotid artery distortion in high bifurcation group was 30.4% (21/69), which was higher than that in non-high bifurcation group [2.5% (2/81)] (P<0.001). Conclusions: The bifurcation position of left carotid artery in patients with atherosclerotic carotid stenosis is higher than that of the right. Patients with high bifurcation of carotid artery are more likely to be complicated with carotid distortion. Preoperative color doppler ultrasound combined with DSA can evaluate the distortion of extracranial carotid artery, thereby providing reference for the selection of surgical methods.
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Shen X, Chen Y, Li C, Yang F, Wen Z, Zheng J, Zhou Z. Rapid and automatic detection of micronuclei in binucleated lymphocytes image. Sci Rep 2022; 12:3913. [PMID: 35273270 PMCID: PMC8913785 DOI: 10.1038/s41598-022-07936-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 02/28/2022] [Indexed: 11/09/2022] Open
Abstract
Cytokinesis block micronucleus (CBMN) assay is a widely used radiation biological dose estimation method. However, the subjectivity and the time-consuming nature of manual detection limits CBMN for rapid standard assay. The CBMN analysis is combined with a convolutional neural network to create a software for rapid standard automated detection of micronuclei in Giemsa stained binucleated lymphocytes images in this study. Cell acquisition, adhesive cell mass segmentation, cell type identification, and micronucleus counting are the four steps of the software's analysis workflow. Even when the cytoplasm is hazy, several micronuclei are joined to each other, or micronuclei are attached to the nucleus, this algorithm can swiftly and efficiently detect binucleated cells and micronuclei in a verification of 2000 images. In a test of 20 slides, the software reached a detection rate of 99.4% of manual detection in terms of binucleated cells, with a false positive rate of 14.7%. In terms of micronuclei detection, the software reached a detection rate of 115.1% of manual detection, with a 26.2% false positive rate. Each image analysis takes roughly 0.3 s, which is an order of magnitude faster than manual detection.
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Zhao L, Jiang W, Chen R, Wang H, Duan Y, Chen X, Shen X, Yin C, Mao Z. Quicklime and Superphosphate Alleviating Apple Replant Disease by Improving Acidified Soil. ACS OMEGA 2022; 7:7920-7930. [PMID: 35284737 PMCID: PMC8908487 DOI: 10.1021/acsomega.1c06876] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 02/11/2022] [Indexed: 06/14/2023]
Abstract
A two-year field experiment was carried out in order to study the effect of different soil modifiers on alleviating apple replant disease (ARD) in the apple orchards. Four treatments were as follows: replanted apple orchard soil (CK), replanted apple orchard soil treated with quicklime 1.0 g·kg-1 (T1), replanted apple orchard soil treated with 1.0 g·kg-1 quicklime and 1.0 g·kg-1 superphosphate (T2), and replanted apple orchard soil treated with 1.0 g·kg-1 plant ash (T3). Soil pH, plant biomass, soil bacteria, soil fungi, Fusarium oxysporum, soil enzymes, plant chlorophyll, and photosynthetic parameters were measured to detect the improvement effects of different soil amendments on acidified soil and to alleviate the ARD. The three treatments stably raised the pH of acidified soil and improved the conditions of the plant rhizosphere environment. Compared with the control, T1, T2, and T3 treatments significantly increased growth and plant biomass indexes, such as plant height and ground diameter, as well as photosynthetic parameters. Among the three treatments, T2 had the strongest effects. In July 2018 and July 2019, the number of bacteria was 151.3 and 190.5% higher in T2-treated soil than in control soil, and the number of soil fungi was 53.6 and 53.3% lower. In 2018 and 2019, the copy number of Fusarium solani was 63.6 and 58.6% lower and that of F. oxysporum was 51.8 and 55.7% lower. The T1, T2, and T3 treatments significantly increased soil enzyme activity and leaf chlorophyll content, and their effects were generally ranked T2 > T1 > T3. In conclusion, a combination of 1.0 g·kg-1 quicklime and 1.0 g·kg-1 superphosphate added to acidified replant soil increased the soil pH, improved the soil environment, increased the number of bacteria, reduced the number of fungi, increased soil enzyme activity, and improved plant photosynthetic capacity, thereby promoting the growth of replanted seedlings and effectively reducing ARD.
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Zhou T, Gao Y, Wang G, Chen Y, Gu C, Bai G, Shi Y, Shen X. Reconfigurable hybrid silicon waveguide Bragg filter using ultralow-loss phase-change material. APPLIED OPTICS 2022; 61:1660-1667. [PMID: 35297842 DOI: 10.1364/ao.451078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
Reconfigurable silicon photonic devices attract much research attention, and hybrid integration with tunable phase-change materials (PCMs) exhibiting large refractive index contrast between amorphous (Am) and crystalline (Cr) states is a promising way to achieve this goal. Here, we propose and numerically investigate a Sb2Se3-Si hybrid waveguide Bragg filter operating in the telecom C-band on the silicon-on-insulator (SOI) platform. The proposed device consists of a Bragg grating (BG) with a thin top layer of ultralow-loss Sb2Se3 PCM interacting with evanescent field of the silicon waveguide mode. By harnessing the ultralow-loss and reversible index change of Sb2Se3 film, the spectral response of the hybrid BGs could be dynamically tuned. We also theoretically investigate the reversible phase transitions between Am and Cr states of Sb2Se3 film that could be attained by applying voltage pulses on the indium-tin-oxide (ITO) strip heater covered on Sb2Se3 film. Thermal simulations show that a 2 V (4.5 V) pulse with a duration of 400 ns (55 ns) applied to electric contacts would produce crystallization (or amorphization). The proposed structure may find great potential for on-chip phase tunable devices on a silicon platform.
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Ma N, Abaker J, Wei G, Chen H, Shen X, Chang G. A high-concentrate diet induces an inflammatory response and oxidative stress and depresses milk fat synthesis in the mammary gland of dairy cows. J Dairy Sci 2022; 105:5493-5505. [DOI: 10.3168/jds.2021-21066] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Accepted: 01/13/2022] [Indexed: 11/19/2022]
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Hu J, He Y, Liu P, Shen X. Antifouling improvement of a polyacrylonitrile membrane blended with an amphiphilic copolymer. INT POLYM PROC 2022. [DOI: 10.1515/ipp-2021-4175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The amphiphilic copolymer polyacrylonitrile-co-poly(hydroxyethyl methacrylate) (PAN-co-PHEMA) was readily blended with polyacrylonitrile (PAN) to fabricate a flat-sheet blending membrane through non-solvent induced phase separation (NIPS). In the membrane-forming process, the hydrophilic PHEMA chains are uniformly distributed on the surface, as revealed by the energy-dispersive X-ray tests. The sponge-like sub-layer embedded with droplet-shaped structures is formed at the cross-sections of membranes, because of the high viscosity of the casting solution. With the increase of copolymer concentration, the mean pore size of the blending membranes increases from 26.9 to 99.8 nm, leading to the increase of membrane flux from 93.6 to 205.4 l/(m2h). The incorporation of PAN-co-PHEMA copolymer endows the blending membrane with a rough surface microstructure and enhanced hydrophilicity. The rejection ratio of membranes for emulsified pump oil reaches 99.9%, indicating a prominent separation performance. In the cycle permeation experiments, the flux recovery ratio of the blending membranes is as high as 99.6%, which is much higher than those of PAN membrane. The irreversible fouling of blending membranes induced by oil adsorption is alleviated, and converted into reversible fouling, owing to the reduction of the adhesion force between foulant and membrane surface. These results suggest that the anti-fouling property of PAN membranes has been dramatically strengthened via the addition of PAN-co-PHEMA copolymer.
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Liu JJ, Xia SB, Que QT, Suo H, Liu J, Shen X, Cheng FX. Correction: Naphthalimide-containing coordination polymer with mechanoresponsive luminescence and excellent metal ion sensing properties. Dalton Trans 2022; 51:3760. [PMID: 35171183 DOI: 10.1039/d2dt90031a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Correction for 'Naphthalimide-containing coordination polymer with mechanoresponsive luminescence and excellent metal ion sensing properties' by Jian-Jun Liu et al., Dalton Trans., 2020, 49, 3174-3180, DOI: 10.1039/C9DT04928B.
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Zhao D, Li X, Wang X, Shen X, Gao W. Applying Digital Twins to Research the Relationship Between Urban Expansion and Vegetation Coverage: A Case Study of Natural Preserve. FRONTIERS IN PLANT SCIENCE 2022; 13:840471. [PMID: 35242160 PMCID: PMC8885539 DOI: 10.3389/fpls.2022.840471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Accepted: 01/13/2022] [Indexed: 06/14/2023]
Abstract
With the growth of the world population, cities expand and encroach on forests and plants, causing many environmental problems. Digital Twin, as the rapidly developing technique in recent years, provides the opportunity to implement the specific situation of forests and plants at present or in the future, which has great performance on predictive analysis and optimization. From the consideration of plants and forests, this study provides a comprehensive case study to research the relationship between urban development boundary and natural environment in a natural preserve in a coastal city. Multispectral data of the study area is collected by Unmanned Aerial Vehicle (UAV), combining satellite remote sensing (RS) historical data and geographic data to establish the digital twin model for plant identification. In conjunction with local Master planning of land use, the results of modeling are used to analyze the influences of urban construction on the natural environment, and the inappropriate aspects of the planning are discovered and summarized. In addition, 6 suggestions for effective management and planning strategies are presented. As plants and forests are effective factors of natural conditions, this study offered an objective assessment for the sustainability and rationality of urban planning with some guidance and bases.
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Mao Y, Yin Y, Cui X, Wang H, Su X, Qin X, Liu Y, Hu Y, Shen X. Homologous Cloning of Potassium Channel Genes From the Superior Apple Rootstock Line 12-2, Which is Tolerant to Apple Replant Disease. Front Genet 2022; 13:803160. [PMID: 35154275 PMCID: PMC8826240 DOI: 10.3389/fgene.2022.803160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 01/10/2022] [Indexed: 11/13/2022] Open
Abstract
Potassium channels are important ion channels that are responsible for the absorption of potassium in the plant nutrient uptake system. In this study, we used homologous molecular cloning to obtain 8 K+ channel genes from the superior apple rootstock line 12-2 (self-named): MsAKT1-1, MsKAT3-2, MsKAT1-3, MsK2P3-4, MsK2P3-5, MsK2P5-6, MsK2P3-7, and MsK2P3-8. Their lengths varied from 942 bp (MsK2P5-6) to 2625 bp (MsAKT1-1), and the number of encoded amino acids varied from 314 (MsK2P5-6) to 874 (MsAKT1-1). Subcellular localization predictions showed that MsAKT1-1, MsKAT3-2, and MsKAT1-3 were localized on the plasma membrane, and MsK2P3-4, MsK2P3-5, MsK2P5-6, MsK2P3-7, and MsK2P3-8 were localized on the vacuole and plasma membrane. The 8 K+ channel proteins contained α helices, extended strands, β turns, and random coils. MsKAT1-3 had four transmembrane structures, MsKAT3-2 had six, and the other six K+ channel genes had five. Protein structure domain analysis showed that MsAKT1-1 contained nine protein domains, followed by MsKAT3-2 with four, MsKAT1-3 with three, and the other five two-pore domain K+ channel proteins with two. Semi-quantitative RT-PCR detection of the K+ channel genes showed that their expression levels were high in roots. qRT-PCR analysis showed that the relative expression levels of the 8 genes changed after exposure to ARD stress. The above results provide a theoretical basis for further research on the functions of potassium channel genes in 12-2 and a scientific basis for the breeding of ARD-resistant rootstock.
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Shen X, Zhou LT, Li AQ, Yi HM, Ouyang BS, Xu HM, Xie JL, Gu YJ, Zhang L, Dong L. [Clinicopathological features and prognosis of high-grade B-cell lymphoma with MYC and bcl-2 and/or bcl-6 rearrangements]. ZHONGHUA BING LI XUE ZA ZHI = CHINESE JOURNAL OF PATHOLOGY 2022; 51:120-125. [PMID: 35152630 DOI: 10.3760/cma.j.cn112151-20210826-00604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Objective: To investigate the clinicopathological characteristics and prognosis of high-grade B-cell lymphoma (HGBL) involving combined rearrangements of MYC, bcl-2 and bcl-6. Methods: A total of 1 138 cases of large B cell lymphoma (LBL) that were treated at the Ruijin Hospital Affiliated to Shanghai Jiaotong University School of Medicine from January 2017 to September 2020 were analyzed using fluorescence in situ hybridization (FISH) with probes against MYC, bcl-2 and bcl-6. The clinical and pathological data of the 45 patients with HGBL that had rearrangements of MYC and bcl-2 and/or bcl-6 were collected and retrospectively analyzed. Results: Among the 1 138 LBL, 45 (4.0%) cases had combined rearrangements of MYC, bcl-2 and/or bcl-6 that included 6 HGBL cases with MYC, bcl-2 and bcl-6 rearrangements, 14 HGBL cases with MYC and bcl-2 rearrangements, and 25 HGBL cases with MYC and bcl-6 rearrangements. Of these 45 patients, 29 patients were male, and 16 patients were female, aged 29 to 83 years. HGBL with MYC, bcl-2 and bcl-6 rearrangements and HGBL with MYC and bcl-2 rearrangement were reclassified as the germinal center B-cell (GCB) subtype using the Hans algorithm. HGBL with MYC and bcl-6 rearrangement were reclassified as the GCB subtype (68.0%) and the non-GCB subtype (32.0%). The vast majority of HGBL cases had a high Ki-67 proliferation index. Most HGBL patients had advanced stage disease with a high IPI score and an increased LDH level. Also, some patients had clinical features including elevated plasma β2-microglobulin levels, B symptoms, and bone marrow involvement. The IPI scores and LDH levels were significantly different between the HGBL cases with MYC, bcl-2 and bcl-6 rearrangements and the HGBL cases with MYC and bcl-6 rearrangements (P<0.05). Compared with the HGBL cases with MYC, bcl-2 and bcl-6 rearrangements, the HGBL cases with MYC and bcl-2 or bcl-6 rearrangements had a lower incidence of bone marrow involvement (P<0.05). There were no significant differences in the prognosis among HGBL cases with MYC, bcl-2 and bcl-6 rearrangements, the cases with MYC and bcl-2 rearrangements, and the cases with MYC and bcl-6 rearrangements (P>0.05). Conclusions: HGBL with MYC, bcl-2 and/or bcl-6 rearrangements are rare types of B-cell lymphoma with high degree of malignancy and have a short overall survival. To reduce misdiagnosis and improve diagnostic accuracy, it is necessary to assess the patients' clinical features and conduct histopathological, immunohistochemical and FISH analyses.
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Zhong H, Yang C, Gao Y, Cao P, Tian Y, Shen X, Wang R, Xu C, Chen H, Yuan W. PERK signaling activation restores nucleus pulposus degeneration by activating autophagy under hypoxia environment. Osteoarthritis Cartilage 2022; 30:341-353. [PMID: 34767959 DOI: 10.1016/j.joca.2021.11.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 11/01/2021] [Accepted: 11/02/2021] [Indexed: 02/02/2023]
Abstract
OBJECTIVES Intervertebral disc (IVD) degeneration is an important disease with no efficient biological therapy identified. Autophagy, a wildly known therapeutic target for human disease, has been demonstrated to be activated under hypoxia, with underlying mechanism remains elusive. Thus, this study aims to specify the role of autophagy in IVD degeneration, the regulating mechanism of hypoxia-inducing autophagy, and the therapeutic value of autophagy for IVD degeneration. METHODS RNA-seq was used to screen the primary pathway affected in NP cells under hypoxia, the specific link between hypoxia and autophagy were investigated using ChIP-seq and dual luciferase reporter assay. Conditional ATG7 knockout mice (ATG7-/-) were constructed for assessing the effect of autophagy on IVD degeneration, and puncture induced mice model of IVD degeneration were used for intradiscal injection to evaluate the therapeutic value of autophagy. RESULTS We demonstrated that hypoxia induces autophagy by transcriptional activation of autophagic gene LC3B and ATG7, which is controlled by PERK signaling. Then, we observed that inhibiting autophagy or PERK signaling leads to impaired NP cell viability and function, furthermore, using ATG7 knockout (ATG7-/-) mice, we identified the protective role of autophagy in IVD. Furthermore, we found that intradiscal injection of PERK signaling agonist, CCT020312, significantly restores the degeneration level of needle punctured mice IVD. CONCLUSION We showed that the activation of PERK signaling upon hypoxia serves as a vital mechanism to induce autophagy and identified the therapeutic value of PERK signaling agonist for IVD degeneration treatment.
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NIE W, Li M, Liu B, Wang J, Jin L, Zhang Y, Ni A, Xiao L, Shen X, Chen J, Lin W, Han F. POS-385 CIRCPTPN14 BINDS TO FUBP1 TO PROMOTE TRANSCRIPTION OF C-MYC IN KIDNEY FIBROSIS. Kidney Int Rep 2022. [DOI: 10.1016/j.ekir.2022.01.407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Uddin W, Nawabi MY, Rehman SU, Hu G, Khan J, Shen X. Determination of p-Dimethylaminobenzaldehyde by Using a Briggs–Rauscher Electrochemical Oscillator. RUSS J ELECTROCHEM+ 2022. [DOI: 10.1134/s1023193521110094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Wang H, Zhang R, Mao Y, Jiang W, Chen X, Shen X, Yin C, Mao Z. Effects of Trichoderma asperellum 6S-2 on Apple Tree Growth and Replanted Soil Microbial Environment. J Fungi (Basel) 2022; 8:jof8010063. [PMID: 35050003 PMCID: PMC8778220 DOI: 10.3390/jof8010063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 12/28/2021] [Accepted: 01/06/2022] [Indexed: 12/22/2022] Open
Abstract
Trichoderma asperellum strain 6S-2 with biocontrol effects and potential growth-promoting properties was made into a fungal fertilizer for the prevention of apple replant disease (ARD). 6S-2 fertilizer not only promoted the growth of Malus hupehensis Rehd seedlings in greenhouse and pot experiments, but also increased the branch elongation growth of young apple trees. The soil microbial community structure changed significantly after the application of 6S-2 fertilizer: the relative abundance of Trichoderma increased significantly, the relative abundance of Fusarium (especially the gene copy numbers of four Fusarium species) and Cryptococcus decreased, and the relative abundance of Bacillus and Streptomyces increased. The bacteria/fungi and soil enzyme activities increased significantly after the application of 6S-2 fertilizer. The relative contents of alkenes, ethyl ethers, and citrullines increased in root exudates of M. hupehensis Rehd treated with 6S-2 fertilizer and were positively correlated with the abundance of Trichoderma. The relative contents of aldehydes, nitriles, and naphthalenes decreased, and they were positively correlated with the relative abundance of Fusarium. In addition, levels of ammonium nitrogen (NH4-N), nitrate nitrogen (NO3-N), available phosphorus (AP), available potassium (AK), organic matter (SOM), and pH in rhizosphere soil were also significantly related to changes in the microbial community structure. In summary, the application of 6S-2 fertilizer was effective in alleviating some aspects of ARD by promoting plant growth and optimizing the soil microbial community structure.
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Huang C, Cheng F, Liu T, Yu S, Shen X, Li Y, Liu J. High Chemoselectivity in the Construction of Aryl Methyl Sulfones via an Unexpected C–S Bond Formation between Sulfonylhydrazides and Dimethyl Phosphite. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1581-2271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
AbstractA highly chemoselective route to aryl methyl sulfones via an unexpected C–S bond formation between sulfonylhydrazides and dimethyl phosphite catalyzed by NaI under mild conditions has been established. This transformation provides an alternative and metal-free pathway to acquire various aryl methyl sulfones in good to excellent yields. Notably, dimethyl phosphite was employed as a stable and readily available alkyl source.
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Shen X, Zhang X, Huang Y, Chen S, Yu Z, Wang Y. Intermediate Sensory Feedback Assisted Multi-Step Neural Decoding for Reinforcement Learning Based Brain-Machine Interfaces. IEEE Trans Neural Syst Rehabil Eng 2022; 30:2834-2844. [DOI: 10.1109/tnsre.2022.3210700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Liang J, Wang J, Shen X, Lu B, Li G, Wang H, Wang H, Yuan L. A Novel Antibacterial Gold Nanoparticles Layer with Self-Cleaning Ability by the Production of Oxygen Bubbles. J Mater Chem B 2022; 10:4203-4215. [DOI: 10.1039/d2tb00258b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Bacterial contamination of medical devices not only constitutes a serious threat to the health of patients, but also promotes the evolution of bacterial drug-resistance. Here, a new strategy to fabricate...
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Chen R, Jiang W, Xu S, Fan H, Chen X, Shen X, Yin C, Mao Z. An emerging chemical fumigant: two-sided effects of dazomet on soil microbial environment and plant response. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:3022-3036. [PMID: 34382174 DOI: 10.1007/s11356-021-15401-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 07/08/2021] [Indexed: 06/13/2023]
Abstract
Methyl bromide has been banned worldwide because it causes damage to the ozone layer and the environment. To find a substitute for methyl bromide, the relationships among fumigation, plant growth, and the microbial community in replant soil require further study. We performed pot and field experiments to investigate the effects of dazomet fumigation on soil properties and plant performance. Changes in soil microbial community structure and diversity were assessed using high-throughput sequencing, and plant physiological performance and soil physicochemical properties were also measured. Dazomet fumigation enhanced photosynthesis and promoted plant growth in replant soil; it altered soil physical and chemical properties and reduced soil enzyme activities, although these parameters gradually recovered over time. After dazomet fumigation, the dominant soil phyla changed, microbial diversity decreased significantly, the relative abundance of biocontrol bacteria such as Mortierella increased, and the relative abundance of pathogenic bacteria such as Fusarium decreased. Over the course of the experiment, the soil microbial flora changed dynamically, and soil enzyme activities and other physical and chemical properties also recovered to a certain extent. This result suggested that the effect of dazomet on soil microorganisms was temporary. However, fumigation also led to an increase in some resistant pathogens, such as Trichosporon, that affect soil function and health. Therefore, it is necessary to consider potential negative impacts of dazomet on the soil environment and to perform active environmental risk management in China.
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Kerioui M, Desmée S, Mercier F, Lin A, Wu B, Jin JY, Shen X, Le Tourneau C, Bruno R, Guedj J. Assessing the impact of organ-specific lesion dynamics on survival in patients with recurrent urothelial carcinoma treated with atezolizumab or chemotherapy. ESMO Open 2021; 7:100346. [PMID: 34954496 PMCID: PMC8718952 DOI: 10.1016/j.esmoop.2021.100346] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2021] [Revised: 09/23/2021] [Accepted: 11/22/2021] [Indexed: 12/26/2022] Open
Abstract
Background Tumor dynamics typically rely on the sum of the longest diameters (SLD) of target lesions, and ignore heterogeneity in individual lesion dynamics located in different organs. Patients and methods Here we evaluated the benefit of analyzing lesion dynamics in different organs to predict survival in 900 patients with metastatic urothelial carcinoma treated with atezolizumab or chemotherapy (IMvigor211 trial). Results Lesion dynamics varied largely across organs, with lymph nodes and lung lesions showing on average a better response to both treatments than those located in the liver and locoregionally. A benefit of atezolizumab was observed on lung and liver lesion dynamics that was attributed to a longer duration of treatment effect as compared to chemotherapy (P value = 0.043 and 0.001, respectively). The impact of lesion dynamics on survival, assessed by a joint model, varied greatly across organs, irrespective of treatment. Liver and locoregional lesion dynamics had a large impact on survival, with an increase of 10 mm of the lesion size increasing the instantaneous risk of death by 12% and 10%, respectively. In comparison, lymph nodes and lung lesions had a lower impact, with a 10-mm increase in the lesion size increasing the instantaneous risk of death by 7% and 5%, respectively. Using our model, we could anticipate the benefit of atezolizumab over chemotherapy as early as 6 months before the end of the study, which is 3 months earlier than a similar model only relying on SLD. Conclusion We showed the interest of organ-level tumor follow-up to better understand and anticipate the treatment effect on survival. Nine hundred metastatic urothelial carcinoma patients from the IMvigor211 phase III trial were treated with atezolizumab versus chemotherapy. A total of 4489 organ-specific measurements were made: 1544 measurements in the lymph, 999 in the lung, 691 in the liver, and 559 locoregionally. Longer treatment effect was observed in the lung (P value = 0.043) and liver (P = 0.001) lesions under atezolizumab compared to chemotherapy. Those with a 10-mm growth of liver lesion had their instantaneous risk of death increased by 12%, compared to 5% in the lung. Treatment effect on overall survival could be predicted based on early organ-specific tumor data 6 months after last patient inclusion.
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Mao Y, Yin Y, Cui X, Wang H, Su X, Qin X, Liu Y, Hu Y, Shen X. Detection of Root Physiological Parameters and Potassium and Calcium Currents in the Rhizoplane of the Apple Rootstock Superior Line 12-2 With Improved Apple Replant Disease Resistance. FRONTIERS IN PLANT SCIENCE 2021; 12:734430. [PMID: 34975935 PMCID: PMC8718911 DOI: 10.3389/fpls.2021.734430] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Accepted: 11/29/2021] [Indexed: 06/14/2023]
Abstract
The cultivation of resistant rootstocks is one of the more effective ways to mitigate apple replant disease (ARD). We performed an ion current test, a pot experiment, and a pathogen infection test on the apple rootstocks 12-2 (self-named), T337, and M26. The ion current test showed that exposure to ARD soil extract for 30 min had a significant effect on K+ ion currents at the meristem, elongation, and mature zones of the M26 rhizoplane and on Ca2+ currents in the meristem and elongation zones. ARD also had a significant effect on Ca2+ currents in the meristem, elongation, and mature zones of the T337 rhizoplane. Exposure to ARD soil extract for 5 min had a significant effect on K+ currents in the meristem, elongation, and mature zones of 12-2 and on the Ca2+ currents in the elongation and mature zones. Compared to a 5-min exposure, a 30-min exposure to ARD extract had a less pronounced effect on K+ and Ca2+ currents in the 12-2 rhizoplane. The pot experiment showed that ARD soil had no significant effect on any root architectural or physiological parameters of 12-2. By contrast, ARD soil significantly reduced some root growth indices and the dry and fresh weights of T337 and M26 compared with controls on sterilized soil. ARD also had a significant effect on root metabolic activity, root antioxidant enzyme activity (except superoxide dismutase for T337), and malondialdehyde content of T337 and M26. Pathogen infection tests showed that Fusarium proliferatum MR5 significantly affected the root structure and reduced the root metabolic activity of T337 and M26. It also reduced their root antioxidant enzyme activities (except catalase for T337) and significantly increased the root malondialdehyde content, reactive oxygen levels, and proline and soluble sugar contents. By contrast, MR5 had no such effects on 12-2. Based on these results, 12-2 has the potential to serve as an important ARD-resistant rootstock.
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Wang H, Zhang R, Duan Y, Jiang W, Chen X, Shen X, Yin C, Mao Z. The Endophytic Strain Trichoderma asperellum 6S-2: An Efficient Biocontrol Agent against Apple Replant Disease in China and a Potential Plant-Growth-Promoting Fungus. J Fungi (Basel) 2021; 7:jof7121050. [PMID: 34947033 PMCID: PMC8705406 DOI: 10.3390/jof7121050] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Revised: 12/02/2021] [Accepted: 12/07/2021] [Indexed: 01/24/2023] Open
Abstract
A study was conducted for endophytic antagonistic fungi obtained from the roots of healthy apple trees growing in nine replanted orchards in Shandong Province, China. The fungi were assessed for their ability to inhibit Fusarium proliferatum f. sp. malus domestica MR5, a fungal strain associated with apple replant disease (ARD). An effective endophyte, designated as strain 6S-2, was isolated and identified as Trichoderma asperellum. Strain 6S-2 demonstrated protease, amylase, cellulase, and laccase activities, which are important for the parasitic and antagonistic functions of pathogenic fungi. The inhibition rate of 6S-2 against Fusarium proliferatum f. sp. malus domestica MR5 was 52.41%. Strain 6S-2 also secreted iron carriers, auxin, ammonia and was able to solubilize phosphorus. Its fermentation extract and volatile substances inhibited the growth of MR5, causing its hyphae to twist, shrink, swell, and rupture. The antifungal activity of the 6S-2 fermentation extract increased with increasing concentrations. It promoted the production and elongation of Arabidopsis thaliana lateral roots, and the strongest effects were seen at a concentration of 50 mg/mL. A GC-MS analysis of the 6S-2 fermentation extract and volatile substances showed that they comprised mainly alkanes, alcohols, and furanones, as well as the specific volatile substance 6-PP. The application of 6S-2 spore suspension to replanted apple orchard soils reduced plant oxidative damage and promoted plant growth in a pot experiment. Therefore, the endophytic strain T. asperellum 6S-2 has the potential to serve as an effective biocontrol fungus for the prevention of ARD in China, and appears to promote plant growth.
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Yang W, Li HY, Wu YF, Mi RJ, Liu WZ, Shen X, Lu YX, Jiang YH, Ma MJ, Shen HY. ac4C acetylation of RUNX2 catalyzed by NAT10 spurs osteogenesis of BMSCs and prevents ovariectomy-induced bone loss. MOLECULAR THERAPY-NUCLEIC ACIDS 2021; 26:135-147. [PMID: 34513300 PMCID: PMC8413676 DOI: 10.1016/j.omtn.2021.06.022] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 06/25/2021] [Indexed: 12/16/2022]
Abstract
N-acetyltransferase 10 (NAT10) is the key enzyme for N4-acetylcytidine (ac4C) modification of mRNA, which participates in various cellular processes and is related to many diseases. Here, we explore the relationships among osteoblast differentiation, NAT10, and ac4C, and we found that NAT0 expression and the ac4C level of total RNA were decreased in the bone tissues of bilateral ovariectomized (OVX) mice and osteoporosis patients. Adenoviruses overexpressing NAT10 reversed bone loss, and Remodelin, an NAT10 inhibitor, enhanced the loss of bone mass in OVX mice. Moreover, bone marrow-derived mesenchymal stem cells (BMSCs) with low-level ac4C modification formed fewer calcium nodules in vitro with NAT10 silencing, whereas BMSCs with high-level ac4C modification formed more calcium nodules with NAT10 overexpression. Moreover, we demonstrated that the ac4C level of runt-related transcription factor 2 (RUNX2) mRNA was increased after BMSCs were cultured in osteogenic medium (OM) and decreased after NAT10 silencing. The RUNX2 mRNA half-life and protein expression decreased after silencing NAT10 in BMSCs. Therefore, NAT10-based ac4C modification promotes the osteogenic differentiation of BMSCs by regulating the RUNX2 ac4C level. Because abnormal levels of NAT10 are probably one of the mechanisms responsible for osteoporosis, NAT10 is a new potential therapeutic target for this disease.
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Geng X, Zhang F, Guo Z, Zhang J, Gao Y, Gu C, Shen X, Zhou J. UV-light-assisted synthesis of CeB6@Ag nano-trees for SERS application. J RARE EARTH 2021. [DOI: 10.1016/j.jre.2021.11.012] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Zhang X, Liu Z, Gui Y, Gan H, Guan Y, He L, Wang X, Shen X, Dai S. Characteristics and preparation of a polarization beam splitter based on a chalcogenide dual-core photonic crystal fiber. OPTICS EXPRESS 2021; 29:39601-39610. [PMID: 34809321 DOI: 10.1364/oe.443797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Accepted: 10/29/2021] [Indexed: 06/13/2023]
Abstract
We reported on a polarization beam splitter based on a novel chalcogenide dual-core photonic crystal fiber. The glass matrix of the optical fiber is Ge10As22Se68. We used computerized numerical control precision drilling methods to manufacture preforms. Then the preform was drawn into an optical fiber with a regular hole structure. The maximum extinction ratio reached -32.76 dB with a 26.27 mm-long optical fiber. Numerical results show that the shortest working length of the designed polarization beam splitter is 636 µm. In addition, the modeling analysis based on the actual structure shows that the theoretical value is consistent with the measured value.
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Katz A, Cao Y, Shen X, Usinger D, Walden S, Chen R. Associations Between Knowledge of Others’ Experiences and Patient Perceptions of Treatments for Localized Prostate Cancer. Int J Radiat Oncol Biol Phys 2021. [DOI: 10.1016/j.ijrobp.2021.07.176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Shen X, Zhang X, Wang Y. Kernel Temporal Difference based Reinforcement Learning for Brain Machine Interfaces . ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:6721-6724. [PMID: 34892650 DOI: 10.1109/embc46164.2021.9631086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Brain-machine interfaces (BMIs) enable people with disabilities to control external devices with their motor intentions through a decoder. Compared with supervised learning, reinforcement learning (RL) is more promising for the disabled because it can assist them to learn without actual limb movement. Current RL decoders deal with tasks with immediate reward delivery. But for tasks where the reward is only given by the end of the trial, existing RL methods may take a long time to train and are prone to becoming trapped in the local minima. In this paper, we propose to embed temporal difference method (TD) into Quantized Attention-Gated Kernel Reinforcement Learning (QAGKRL) to solve this temporal credit assignment problem. This algorithm utilizes a kernel network to ensure the global linear structure and adopts a softmax policy to efficiently explore the state-action mapping through TD error. We simulate a center-out task where the agent needs several steps to first reach a periphery target and then return to the center to get the external reward. Our proposed algorithm is tested on simulated data and compared with two state-of-the-art models. We find that introducing the TD method to QAGKRL achieves a prediction accuracy of 96.2% ± 0.77% (mean ± std), which is significantly better the other two methods.Clinical Relevance-This paper proposes a novel kernel temporal difference RL method for the multi-step task with delayed reward delivery, which potentially enables BMI online continuous decoding.
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Tan J, Shen X, Zhang X, Wang Y. Multivariate Encoding Analysis of Medial Prefrontal Cortex Cortical Activity during Task Learning. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2021; 2021:6699-6702. [PMID: 34892645 DOI: 10.1109/embc46164.2021.9630322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Studies have shown that medial prefrontal cortex (mPFC) is responsible for outcome evaluation. Some recent studies also suggest that mPFC may play an important role in goal planning and action execution when performing a task. If the information encoded in mPFC can be accurately extracted and identified, it can improve the design of brain-machine interfaces by better reconstructing subjects' motion intention guided by reward information. In this paper, we investigate whether mPFC neural signals simultaneously encode information of goal planning, action execution and outcome evaluation. Linear-nonlinear-Poisson (LNP) model is applied for encoding analysis on mPFC neural spike data when a rat is learning a two-lever-press discrimination task. We use the L2-norm of tuning parameter in LNP model to indicate the importance of the encoded information and compare the spike train prediction performance of LNP model using all information, the most significant information and reward information only. The preliminary results indicate that mPFC activity can encode simultaneously the information of goal planning, action execution and outcome evaluation and that all the relevant information could be reconstructed from mPFC spike trains on a single trial basis.
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Ho WHH, Lim DYZ, Thiagarajan N, Wang H, Loo WTW, Sng GGR, Shen X, Sia CH, Tan BYQ, Lim HY, Wang LK, Chow W, Lim PCY, Yeo TJ, Chong DTT. Prevalence and diagnostic yield of investigating t wave inversion in a large unselected pre-participation cohort of young Asian males. Eur Heart J 2021. [DOI: 10.1093/eurheartj/ehab724.2721] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Background/Introduction
T wave inversion (TWI) is a potentially abnormal finding on pre-participation screening electrocardiography (ECG), as it may suggest an underlying cardiomyopathy that should be risk stratified appropriately to minimise the risk of sports-related sudden cardiac death. Existing international guidelines prescribe criteria for investigating TWI in athletes. However, it is not established if these criteria can be extrapolated to screening unselected individuals. There is also evidence recommending against investigating specific patterns of anterior TWI in certain subsets of athletes due to low diagnostic yield; whether these exemptions may apply to non-athletes is uncertain. Given the importance of physical activity for primary prevention of cardiovascular disease in the general population, more evidence to guide pre-participation ECG screening of unselected individuals is needed.
Purpose
Firstly, to determine the epidemiology of abnormal TWI in a large unselected pre-participation cohort of young males of predominantly Asian ethnicity. Secondly, to determine the diagnostic yield of an echocardiography-guided approach to investigating individuals with abnormal TWI for a cardiomyopathy.
Methods
All individuals who attended a national centre for pre-enlistment cardiac screening over 39 months from 2017 were examined. Demographic data, anthropometric data and standardised physical fitness test scores were collected. Resting 12-lead ECG was performed for all individuals. Those with abnormal TWI, defined as a negatively deflected T wave of at least 0.1 mV amplitude in two contiguous leads, were referred to tertiary centres for echocardiography.
Results
69,714 consecutive males of mean age 17.9±1.1 years were screened. 562 individuals (0.8%) displayed abnormal TWI. Better aerobic fitness, but not muscular strength, was associated with a higher prevalence of abnormal TWI in general and specifically in the anterior territory, although not beyond leads V1-V2. Aerobic fitness had no association with abnormal TWI in the inferior territory or lateral territory. Of those with abnormal TWI, 12 individuals (2.1%) were newly diagnosed with a cardiomyopathy. Significant factors associated with a cardiomyopathy diagnosis were abnormal TWI in the lateral territory, abnormal TWI in the anterior territory beyond lead V2, deeper maximum TWI depth, presence of hypertension and higher body mass index. No individual presenting with TWI restricted to solely leads V1-V2 and/or two inferior leads without abnormal TWI in other contiguous leads was diagnosed with a cardiomyopathy.
Conclusion
Investigating abnormal TWI in an unselected pre-participation cohort of young Asian males had a significant yield, particularly in individuals manifesting abnormal TWI in the lateral territory and the anterior territory beyond lead V2. The ECG finding of anterior TWI in an unselected population may not be as benign as that in athletic populations.
Funding Acknowledgement
Type of funding sources: None. Abnormal TWI: Prevalence and Yield
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Champenois EG, Sanchez DM, Yang J, Figueira Nunes JP, Attar A, Centurion M, Forbes R, Gühr M, Hegazy K, Ji F, Saha SK, Liu Y, Lin MF, Luo D, Moore B, Shen X, Ware MR, Wang XJ, Martínez TJ, Wolf TJA. Conformer-specific photochemistry imaged in real space and time. Science 2021; 374:178-182. [PMID: 34618569 DOI: 10.1126/science.abk3132] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
[Figure: see text].
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Ma N, Liang Y, Coleman DN, Li Y, Ding H, Liu F, Cardoso FF, Parys C, Cardoso FC, Shen X, Loor JJ. Methionine supplementation during a hydrogen peroxide challenge alters components of insulin signaling and antioxidant proteins in subcutaneous adipose explants from dairy cows. J Dairy Sci 2021; 105:856-865. [PMID: 34635354 DOI: 10.3168/jds.2021-20541] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Accepted: 08/25/2021] [Indexed: 12/22/2022]
Abstract
Enhanced postruminal supply of methionine (Met) during the peripartal period alters protein abundance of insulin, AA, and antioxidant signaling pathways in subcutaneous adipose tissue (SAT). Whether SAT is directly responsive to supply of Met and can induce molecular alterations is unknown. Our objective was to examine whether enhanced Met supply during an oxidative stress challenge in vitro alters insulin, AA, inflammation, and antioxidant signaling-related protein networks. Four late-lactation Holstein cows (average 27.0 kg of milk per day) were used for SAT collection. Tissue was incubated in duplicate for 4 h in a humidified incubator with 5% CO2 at 37°C according to the following experimental design: control medium with an "ideal" profile of essential AA (CTR; Lys:Met 2.9:1), CTR plus 100 μM H2O2 (HP), or CTR with greater Met supply plus 100 μM H2O2 (HPMET; Lys:Met 2.5:1). Molecular targets associated with insulin signaling, lipolysis, antioxidant nuclear factor, erythroid 2 like 2 (NFE2L2), inflammation, and AA metabolism were determined through reverse-transcription quantitative PCR and western blotting. Data were analyzed using the MIXED procedure of SAS 9.4 (SAS Institute Inc.). Among proteins associated with insulin signaling, compared with CTR, HP led to lower abundance of phosphorylated AKT serine/threonine kinase (p-AKT) and solute carrier family 2 member 4 (SLC2A4; insulin-induced glucose transporter). Although incubation with HPMET restored abundance of SLC2A4 to levels in the CTR and upregulated abundance of fatty acid synthase (FASN) and phosphorylated 5'-prime-AMP-activated protein kinase (p-AMPK), it did not alter p-AKT, which remained similar to HP. Among proteins associated with AA signaling, compared with CTR, challenge with HP led to lower abundance of phosphorylated mechanistic target of rapamycin (p-MTOR), and HPMET did not restore abundance to CTR levels. Among inflammation-related targets studied, incubation with HPMET led to greater protein abundance of nuclear factor kappa B subunit p65 (NFKB-RELA). The response in NFKB observed with HPMET was associated with a marked upregulation of the antioxidant transcription regulator NFE2L2 and the antioxidant enzyme glutathione peroxidase 1 (GPX1). No effects of treatment were detected for mRNA abundance of proinflammatory cytokines or antioxidant enzymes, underscoring the importance of post-transcriptional regulation. Overall, data indicated that short-term challenge with H2O2 was particularly effective in reducing insulin and AA signaling. Although a greater supply of Met had little effect on those pathways, it seemed to restore the protein abundance of the insulin-induced glucose transporter. Overall, the concomitant upregulation of key inflammation and antioxidant signaling proteins when a greater level of Met was supplemented to oxidant-challenged SAT highlighted the potential role of this AA in regulating the inflammatory response and oxidant status. Further studies should be conducted to assess the role of postruminal supply of Met and other AA in the regulation of immune, antioxidant, and metabolic systems in peripartal cow adipose tissue.
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Chen S, Ye T, Fu F, Deng C, Hu H, Sun Y, Pan Y, Zhang Y, Xiang J, Zhang Y, Shen X, Wang S, Wang Z, Li Y, Chen H. P56.03 Prognostic Value of Tumor Spread Through Air Spaces in Patients With Lung Adenocarcinoma after Radical Surgery. J Thorac Oncol 2021. [DOI: 10.1016/j.jtho.2021.08.569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Lin MF, Singh N, Liang S, Mo M, Nunes JPF, Ledbetter K, Yang J, Kozina M, Weathersby S, Shen X, Cordones AA, Wolf TJA, Pemmaraju CD, Ihme M, Wang XJ. Imaging the short-lived hydroxyl-hydronium pair in ionized liquid water. Science 2021; 374:92-95. [PMID: 34591617 DOI: 10.1126/science.abg3091] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
[Figure: see text].
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Zhan Y, Shen X, Chen M, Yang K, Xie H. Bioleaching of tellurium from mine tailings by indigenous Acidithiobacillus ferrooxidans. Lett Appl Microbiol 2021; 75:1076-1083. [PMID: 34586632 DOI: 10.1111/lam.13569] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 09/02/2021] [Accepted: 09/12/2021] [Indexed: 11/28/2022]
Abstract
Tellurium (Te) is a scarce and valuable metalloid, which can be found in some mine tailings. In this work, an indigenous Acidithiobacillus ferrooxidans strain was used to leach Te from mine tailings collected in the Shimian Te mine region, China. Under the optimized conditions of initial pH of 2·0, pulp density of 4% and temperature of 30°C, 47·77% of Te can be dissolved after 24 days of bioleaching. The leaching of Te by different systems such as bioleaching, Ferric ion (Fe(III)) leaching and acid leaching was compared. The results showed that the leaching behaviour of Te is similar to that of sulphur in sulphide minerals, that is, Fe(III) first oxidizes telluride (Te(-II)) in minerals to elemental Te, and then elemental Te can be oxidized by bacteria to Te(IV) and Te(VI). Besides, it was also showed by scanning electron microscope observation and Fourier transform infrared spectroscopy analysis of the ore sample before and after bioleaching that some bedded structure covered on the surface of the ore after bioleaching acting as a reaction compartment, and the changing of active groups indicated a possible attachment between bacteria and ore. There is an indirect mechanism involved in bioleaching of Te.
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Yu M, Li R, Wan M, Chen J, Shen X, Li G, Ge M, Zhang R. MDA5 attenuate autophagy in chicken embryo fibroblasts infected with IBDV. Br Poult Sci 2021; 63:154-163. [PMID: 34406094 DOI: 10.1080/00071668.2021.1969643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
1. The role of melanoma differentiation-associated protein 5 (MDA5) in infectious bursal disease virus (IBDV)-induced autophagy was studied in chicken embryos.2. Chicken embryo fibroblasts (CEF) were used as the research model and small interfering RNA (siRNA), western blot, indirect enzyme-linked immunosorbent assay (ELISA), real-time fluorescence quantitative polymerase chain reaction (PCR) and transmission electron microscopy were used to detect autophagy, IBDV replication, CEF damage, and activation of both MDA5 and its signalling pathway.3. The results showed that CEF infected with IBDV activated the intracellular MDA5 signalling pathway and caused autophagy via inactivation of the AKT/mTOR pathway. While autophagy promotes IBDV proliferation, MDA5 weakens IBDV-induced CEF autophagy thus inhibiting IBDV replication and protecting CEF cells.4. The results indicated that chMDA5 can be activated by IBDV and attenuate CEF autophagy caused by IBDV infection, thereby inhibiting IBDV replication. This study provided a foundation for further exploring the relationship between viruses, autophagy and the pathogenic mechanism of the MDA5 pathway involved in IBDV.
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Hsu CT, Wang Z, Oh S, Rupprecht G, Delubac D, Shen X, Hsu D. 1782P Micro-organospheres as a novel precision oncology platform in colorectal cancer. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.1725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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Li X, Zhang H, Yuan J, Wu L, Shen X, Xu W. 466P Landscape of HER2 alterations in 5786 Chinese patients with colorectal cancer. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Qin Y, Zhang S, Cui S, Shen X, Wang J, Cui X, Zuo M, Gao Z, Zhang J, Yang J, Zhu H, Chang B. High urinary excretion rate of glucose attenuates serum uric acid level in type 2 diabetes with normal renal function. J Endocrinol Invest 2021; 44:1981-1988. [PMID: 33515212 PMCID: PMC8357730 DOI: 10.1007/s40618-021-01513-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 01/18/2021] [Indexed: 12/15/2022]
Abstract
AIMS/INTRODUCTION The relationship between urinary excretion rate of glucose (UEGL) and uric acid (UA) metabolism in adults with type 2 diabetes (T2D) remains unclear to date. This study aimed to investigate the relationships of UEGL with serum UA (SUA), urinary excretion rate of uric acid (UEUA), and renal clearance of uric acid (CLUA) in adults with T2D. We hypothesised that high UEGL increases UA excretion, which in turn leads to lower SUA. MATERIALS AND METHODS This was a cross-sectional study of 635 inpatients with T2D recruited between 2018 and 2019. The relationships of UEGL with UEUA, CLUA, and hyperuricaemia were assessed using analysis of covariance and multivariate regression analysis. RESULTS Patients in the higher quartile of UEGL tended to have lower SUA levels than those in the lower quartile. In contrast, patients in the higher quartile of UEGL tended to have higher CLUA (p for trend < 0.0001), and a similar trend was observed for UEUA. In adjusted multivariable linear regression model, UEGL was negatively correlated with SUA (β = - 0.023, 95% CI - 0.034 to - 0.013, p < 0.0001). However, positive correlations of UEGL with UEUA (β = 0.046, 95% CI 0.018-0.074, p = 0.001) and CLUA (β = 0.063, 95% CI 0.042-0.085, p < 0.0001) were found. Furthermore, consistent significant inverse associations were observed between quartiles of UEGL and hyperuricaemia in the adjusted multivariate logistic regression model. CONCLUSIONS A high UEGL level was positively correlated with UEUA and CLUA. Moreover, it was inversely associated with SUA level, and a consistently increased UEGL level reduced the risk of hyperuricaemia in patients with T2D.
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Ding S, Wang Z, Hsu C, Hsu D, Shen X. 3O Patient-derived micro-organospheres (MOS) recapitulate tumor microenvironment and heterogeneity for precision oncology. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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140
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Wang K, Zhang H, Xu H, Lv Y, Shen X, Huang D, Zhang X. 1250P Differences of immune microenvironment among NSCLC patients with various KRAS mutation types. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.1855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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141
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Jiang Q, Zhang H, Liu S, Shen X, Hou L. 903P Analysis of hyper-progression disease-related gene alterations in Chinese patients with non-nasopharyngeal head and neck cancer. Ann Oncol 2021. [DOI: 10.1016/j.annonc.2021.08.1313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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142
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Mao N, Song B, Pan L, Liu X, Lin C, Zhang P, Shen X, Dai S. Spectral fitting method for obtaining the refractive index and thickness of chalcogenide films. OPTICS EXPRESS 2021; 29:29329-29340. [PMID: 34615044 DOI: 10.1364/oe.438391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Accepted: 08/20/2021] [Indexed: 06/13/2023]
Abstract
Spectral fitting method (SFM) was proposed to obtain the refractive index (RI) and thickness of chalcogenide films based on transmission spectra. It extended the Swanepoel method to the films on the order of hundreds of nanometers in thickness. The RI and thickness of the films can be obtained quickly and accurately by using the SFM based on the transmission spectrum with only one peak and valley. The method's reliability theoretically was evaluated by simulation analysis. The results showed that the accuracy of the RI and thickness was better than 0.2% by using the SFM regardless of thin or thick film. Finally, the RI and thickness of the new ultralow loss reversible phase-change material Sb2Se3 films were obtained experimentally by the SFM. This work should provide a useful guideline for obtaining the RI and thickness of the transparent optical films.
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Chen S, Zhang X, Shen X, Huang Y, Wang Y. Tracking Fast Neural Adaptation by Globally Adaptive Point Process Estimation for Brain-Machine Interface. IEEE Trans Neural Syst Rehabil Eng 2021; 29:1690-1700. [PMID: 34410924 DOI: 10.1109/tnsre.2021.3105968] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Brain-machine interfaces (BMIs) help the disabled restore body functions by translating neural activity into digital commands to control external devices. Neural adaptation, where the brain signals change in response to external stimuli or movements, plays an important role in BMIs. When subjects purely use neural activity to brain-control a prosthesis, some neurons will actively explore a new tuning property to accomplish the movement task. The prediction of this neural tuning property can help subjects adapt more efficiently to brain control and maintain a good decoding performance. Existing prediction methods track the slow change of the tuning property in the manual control, which is not suitable for the fast neural adaptation in brain control. In order to identify the active neurons in brain control and track their tuning property changes, we propose a globally adaptive point process method (GaPP) to estimate the neural modulation state from spike trains, decompose the states into the hyper preferred direction and reconstruct the kinematics in a dual-model framework. We implement the method on real data from rats performing a two-lever discrimination task under manual control and brain control. The results show our method successfully predicts the neural modulation state and identifies the neurons that become active in brain control. Compared to the existing method, ours tracks the fast changes of the hyper preferred direction from manual control to brain control more accurately and efficiently and reconstructs the kinematics better and faster.
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Putra I, Shen X, Anwar KN, Rabiee B, Samaeekia R, Almazyad E, Giri P, Jabbehdari S, Hayat MR, Elhusseiny AM, Ghassemi M, Mahmud N, Edward DP, Joslin CE, Rosenblatt MI, Dana R, Eslani M, Hematti P, Djalilian AR. Preclinical Evaluation of the Safety and Efficacy of Cryopreserved Bone Marrow Mesenchymal Stromal Cells for Corneal Repair. Transl Vis Sci Technol 2021; 10:3. [PMID: 34383879 PMCID: PMC8362636 DOI: 10.1167/tvst.10.10.3] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Purpose Mesenchymal stromal cells (MSCs) have been shown to enhance tissue repair as a cell-based therapy. In preparation for a phase I clinical study, we evaluated the safety, dosing, and efficacy of bone marrow–derived MSCs after subconjunctival injection in preclinical animal models of mice, rats, and rabbits. Methods Human bone marrow–derived MSCs were expanded to passage 4 and cryopreserved. Viability of MSCs after thawing and injection through small-gauge needles was evaluated by vital dye staining. The in vivo safety of human and rabbit MSCs was studied by subconjunctivally injecting MSCs in rabbits with follow-up to 90 days. The potency of MSCs on accelerating wound healing was evaluated in vitro using a scratch assay and in vivo using 2-mm corneal epithelial debridement wounds in mice. Human MSCs were tracked after subconjunctival injection in rat and rabbit eyes. Results The viability of MSCs after thawing and immediate injection through 27- and 30-gauge needles was 93.1% ± 2.1% and 94.9% ± 1.3%, respectively. Rabbit eyes demonstrated mild self-limiting conjunctival inflammation at the site of injection with human but not rabbit MSCs. In scratch assay, the mean wound healing area was 93.5% ± 12.1% in epithelial cells co-cultured with MSCs compared with 40.8% ± 23.1% in controls. At 24 hours after wounding, all MSC-injected murine eyes had 100% corneal wound closure compared with 79.9% ± 5.5% in controls. Human MSCs were detectable in the subconjunctival area and peripheral cornea at 14 days after injection. Conclusions Subconjunctival administration of MSCs is safe and effective in promoting corneal epithelial wound healing in animal models. Translational Relevance These results provide preclinical data to support a phase I clinical study.
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Chen R, Jiang W, Duan Y, Qiao H, Fan H, Chen X, Shen X, Yin C, Mao Z. Effect of Emerging Soil Chemical Amendments on the Replant Soil Environment and Growth of Malus hupehensis Rehd. Seedlings. ACS OMEGA 2021; 6:20445-20454. [PMID: 34395992 PMCID: PMC8359168 DOI: 10.1021/acsomega.1c02447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/09/2021] [Accepted: 07/16/2021] [Indexed: 06/13/2023]
Abstract
The effects of different soil chemical amendments (T1, 1‰ quicklime + 1‰ superphosphate; T2, 1‰ quicklime; T3, 1‰ superphosphate) on the soil environment and growth of Malus hupehensis Rehd. seedlings in aged apple orchard soil were studied to provide new insight into the prevention and control of apple replant disease. The amendments differed in their ability to ameliorate the soil environment; nevertheless, they all promoted the growth of M. hupehensis Rehd. seedlings, and the greatest enhancement of growth was observed in T1. On August 15, 2018, soil urease, sucrase, phosphatase, and catalase activities were 1.67 times, 1.32 times, 1.62 times, and 1.35 times higher in T1 compared with CK, respectively. The soil pH increased, which alleviated soil acidification. T1 also promoted the renewal of the community structure and the diversity of soil microorganisms. The copy numbers of Fusarium solani and Fusarium oxysporum were 71.96 and 70.30% lower in T1 compared with CK, respectively. The seedling height and root length of M. hupehensis Rehd. seedlings increased by 40.97 and 289.69% in T1 compared with CK, respectively. Therefore, soil replanting obstacles can be overcome with the application of quicklime and superphosphate; these soil chemical amendments also improve the soil microbial ecological environment and promote the growth of M. hupehensis Rehd. seedlings.
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Hu J, Zhu X, Xie D, Peng X, Zhu M, Cheng F, Shen X. Antifouling enhancement of polyacrylonitrile-based membrane grafted with poly(sulfobetaine methacrylate) layers. JOURNAL OF POLYMER ENGINEERING 2021. [DOI: 10.1515/polyeng-2021-0112] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Abstract
In this work, zwitterionic polyacrylonitrile (PAN)-based membranes were synthesized via surface grafting strategy for improving the antifouling properties. The copolymer membrane consisting of PAN and poly(hydroxyethyl methacrylate) segments, was cast via nonsolvent induced phase separation, and then treated with acryloyl chloride to tether with carbon-carbon double bonds. Zwitterionic poly(sulfobetaine methacrylate) (PSBMA) layers were grafted onto membrane surface via concerted reactions of radical grafting copolymerization and quaternization with 2-(dimethylamino)ethyl methacrylate) and 1, 3-propanesultone (1, 3-PS) as the monomers. The grafting degree (GD) of PSBMA layers increases with the incremental content of monomers, leading to the enhancement in membranes surface hydrophilicity. The permeation experiments show that the flux of the zwitterionic membrane increases and then decreases with the increasing GD value, because of the surface coverage of PSBMA layers. The zwitterionic membrane has excellent separation efficiency for oil-in-water emulsion, with the rejection of a higher value than 99%. The irreversible membrane fouling caused by oil adsorption has been suppressed, as proved by the cycle-filtration tests. These outcomes confirm that oil-fouling resistances of membranes are improved obviously by the surface grafting of zwitterionic PSBMA layers.
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Xie S, Chen D, Gu C, Jiang T, Zeng S, Wang YY, Ni Z, Shen X, Zhou J. Molybdenum Oxide/Tungsten Oxide Nano-heterojunction with Improved Surface-Enhanced Raman Scattering Performance. ACS APPLIED MATERIALS & INTERFACES 2021; 13:33345-33353. [PMID: 34232012 DOI: 10.1021/acsami.1c03848] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
By virtue of their high uniformity and stability, metal oxide-based surface-enhanced Raman spectroscopy (SERS) substrates have attracted enormous attention for molecular trace detection. However, strategies for further enhancing the SERS sensitivity are still desired. Herein, MoOx/WOx nano-heterojunctions are constructed by mixing MoOx and WOx together (MoOx/WOx hybrid) with diverse weight ratios. Using a 532 nm laser as the excitation source and R6G as the Raman reporter, it is shown that the Raman signal intensity (for the peak @ 1360 cm-1) obtained on the optimal MoOx/WOx hybrid (MoOx/WOx = 1:1/3) is twice that observed on a pure MoOx or WOx substrate. Moreover, a limit of detection of 10-8 M and an enhancement factor of 108 are achieved. In the SERS enhancement mechanism investigation, it is revealed that MoOx and WOx form a staggered band structure. During the SERS measurement, electron-hole pairs are generated in the nano-heterojunction using the incident laser. They are then separated by the built-in potential with the electrons moving toward WOx. The accumulated electrons on WOx are further transferred to the R6G molecules through the coupling of orbitals. Consequently, the molecular polarizability is amplified, and SERS performance is enhanced. The abovementioned explanation is supported by the evidence that the contribution of the chemical enhancement mechanism in the optimal MoOx/WOx hybrid substrate is about 2.5 times or 5.9 times that in the pure WOx or MoOx substrate.
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Miao ZH, Zhou WX, Cheng RY, Liang HJ, Jiang FL, Shen X, Lu JH, Li M, He F. Dysbiosis of intestinal microbiota in early life aggravates high-fat diet induced dysmetabolism in adult mice. BMC Microbiol 2021; 21:209. [PMID: 34238228 PMCID: PMC8268513 DOI: 10.1186/s12866-021-02263-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Accepted: 06/15/2021] [Indexed: 12/23/2022] Open
Abstract
BACKGROUND Accumulating evidence have shown that the intestinal microbiota plays an important role in prevention of host obesity and metabolism disorders. Recent studies also demonstrate that early life is the key time for the colonization of intestinal microbes in host. However, there are few studies focusing on possible association between intestinal microbiota in the early life and metabolism in adulthood. Therefore the present study was conducted to examine whether the short term antibiotic and/or probiotic exposure in early life could affect intestinal microbes and their possible long term effects on host metabolism. RESULTS A high-fat diet resulted in glucose and lipid metabolism disorders with higher levels of visceral fat rate, insulin-resistance indices, and leptin. Exposure to ceftriaxone in early life aggravated the negative influences of a high-fat diet on mouse physiology. Orally fed TMC3115 protected mice, especially those who had received treatment throughout the whole study, from damage due to a high-fat diet, such as increases in levels of fasting blood glucose and serum levels of insulin, leptin, and IR indices. Exposure to ceftriaxone during the first 2 weeks of life was linked to dysbiosis of the fecal microbiota with a significant decrease in the species richness and diversity. However, the influence of orally fed ceftriaxone on the fecal microbiota was limited to 12 weeks after the termination of treatment. Of note, at week 12 there were still some differences in the composition of intestinal microbiota between mice provided with high fat diet and antibiotic exposure and those only fed a high fat diet. CONCLUSIONS These results indicated that exposure to antibiotics, such as ceftriaxone, in early life may aggravate the negative influences of a high-fat diet on the physiology of the host animal. These results also suggest that the crosstalk between the host and their intestinal microbiota in early life may be more important than that in adulthood, even though the same intestinal microbes are present in adulthood.
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Yang LM, Shu C, Chen Z, Liu YY, Wu J, Shen X. Gas kinetic flux solver based high-order finite-volume method for simulation of two-dimensional compressible flows. Phys Rev E 2021; 104:015305. [PMID: 34412237 DOI: 10.1103/physreve.104.015305] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 06/16/2021] [Indexed: 06/13/2023]
Abstract
In this work, a high-order gas kinetic flux solver (GKFS) is developed for simulation of two-dimensional (2D) compressible flows. Different from the conventional gas kinetic scheme, which uses the local integral solution to the Boltzmann equation to reconstruct the numerical fluxes of macroscopic governing equations, the GKFS evaluates the numerical fluxes by the local asymptotic solution to the Boltzmann equation. This local asymptotic solution consists of the equilibrium distribution function and its substantial derivative at the cell interface. To achieve high-order accuracy in the simulation, the substantial derivative is discretized by a difference scheme with second-order accuracy in time and fourth-order accuracy in space, which results in a polynomial of the equilibrium distribution function at different locations and time levels. The Taylor series expansion is then introduced to simplify this polynomial. As a result, a simple high-order accurate local asymptotic solution to the Boltzmann equation is obtained and the numerical fluxes of macroscopic governing equations are given explicitly. A series of numerical examples are presented to validate the accuracy and capability of the developed high-order GKFS. Numerical results demonstrate that the high-order GKFS can achieve the desired accuracy on both the quadrilateral mesh and the triangular mesh and it outperforms the second-order counterpart.
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Wu S, Zhou Y, Liu P, Zhang H, Wang W, Fang Y, Shen X. MicroRNA-29b-3p promotes 5-fluorouracil resistance <em>via</em> suppressing TRAF5-mediated necroptosis in human colorectal cancer. Eur J Histochem 2021; 65:3247. [PMID: 34155879 PMCID: PMC8239451 DOI: 10.4081/ejh.2021.3247] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Accepted: 05/21/2021] [Indexed: 02/07/2023] Open
Abstract
Drug resistance in colorectal cancer is a great challenge in clinic. Elucidating the deep mechanism underlying drug resistance will bring much benefit to diagnosis, therapy and prognosis in patients with colorectal cancer. In this study, miR-29b-3p was shown to be involved in resistance to 5-fluorouracil (5-FU)-induced necroptosis of colorectal cancer. Further, miR-29b-3p was shown to target a regulatory subunit of necroptosis TRAF5. Rescue of TRAF5 could reverse the effect of miR-29b-3p on 5-FU-induced necroptosis, which was consistent with the role ofnecrostatin-1 (a specific necroptosis inhibitor). Then it was demonstrated that miR-29b-3p was positively correlated with chemo-resistance in colorectal cancer while TRAF5 negatively. In conclusion, it is deduced that miR-29b-3p/TRAF5 signaling axis plays critical role in drug resistance in chemotherapy for colorectal cancer patients by regulating necroptosis. The findings in this study provide us a new target for interfere therapy in colorectal cancer.
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