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Novak I, Kovač B. Polyoxometalates and vanadium alkoxides: Electronic structure and properties. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.04.027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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77
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Sykora R, Chvojka J, Krouzecky A, Radej J, Varnerova V, Karvunidis T, Novak I, Matejovic M. Effects of continuous hemofiltration on organ perfusion, energy metabolism, oxidative stress, endothelial dysfunction and inflammation. Crit Care 2009. [PMCID: PMC4084159 DOI: 10.1186/cc7437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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78
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Abstract
The ring strain energies in a series of [ n]ladderanes (n = 3-8) have been calculated by using high-level ab initio method (G3MP2//B3LYP-6-31G*) and the series of isodesmic, homodesmotic, and protobranching compensated reactions. The results show that various four-member rings incorporated into the ladderane chain have different strain energies and that the total strain in a ladderane molecule is smaller than the corresponding sum of strain energies of the cyclobutane rings.
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Barwick M, Abu-Izneid T, Novak I. Computational Study of Pharmacophores: β-Sultams. J Phys Chem A 2008; 112:10993-7. [PMID: 18828576 DOI: 10.1021/jp805024y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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80
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Wembridge P, Robinson H, Novak I. Computational study of ligand binding to protein receptors. Bioorg Chem 2008; 36:288-94. [PMID: 18801553 DOI: 10.1016/j.bioorg.2008.08.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2008] [Revised: 07/31/2008] [Accepted: 08/03/2008] [Indexed: 11/30/2022]
Abstract
We have determined, for the first time, the enthalpic contributions to the energy change associated with ligand reorganization (LR) upon the binding of the same ligand to multiple sites within human serum albumine (HSA). Quantum mechanics based density functional theory (DFT) has been used for the LR calculations, which provides much better accuracy than previously used molecular mechanics methods (MM). Our findings show that for some ligands these enthalpic contributions can be attributed to specific structural and conformational changes.
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81
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Barwick M, Abu-Izneid T, Novak I, Kovač B. Photoelectron spectra of some organozinc compounds. Chem Phys Lett 2008. [DOI: 10.1016/j.cplett.2008.06.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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82
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Jensen F, Novak I. The dual role of red blood cells in tissue oxygen delivery. Comp Biochem Physiol A Mol Integr Physiol 2008. [DOI: 10.1016/j.cbpa.2008.04.257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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83
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Novak I, Kovač B. Electronic Structure of Substituted Benzoquinones and Quinonechloroimides. J Phys Chem A 2008; 112:3061-5. [DOI: 10.1021/jp711661t] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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84
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85
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86
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Babal P, Kobzova D, Novak I, Dubinsky P, Jalili N. First case of cutaneous human dirofilariosis in Slovak Republic. BRATISL MED J 2008; 109:486-488. [PMID: 19205556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Dirofilariosis is a zoonotic disease caused by several species of the genus of Dirofilaria. The causative agent initiates a dangerous canine disease reported from many parts of the globe. The parasites are transmitted by arthropods, which act either as a vector or intermediate hosts. In humans the parasites do not usually reach the adult stage but microfilaremia is absent because of mating impossibility. Human dirofilariosis is caused by D. immitis or D. repens and has been reported from many parts of the world including European countries, namely Italy, France, Spain and Greece. Sporadically, this parasitosis is detected in Central European countries such as Hungary and Switzerland. The presented paper reports the first case of human cutaneous dirofilariosis in Slovakia. The clinical manifestation was a typical subcutaneous granuloma with the adult worm in the center. The identification of Dirofilaria repens was made based on morphological appearance of the parasite. The patient 60 years old, lives in the area where in 2005 six cases of canine dirofilariosis caused by the same species were reported (Fig. 2, Ref. 16).
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87
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Novak I, Kovač B. Why are Fluorene-Containing Materials so Versatile? An Electronic Structure Perspective. Aust J Chem 2008. [DOI: 10.1071/ch08328] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
The HeI/HeII photoelectron spectra of substituted fluorenes (2-aminofluorene, 2,7-dibromofluorene, 2-acetylfluorene, and 9-trimethylsilylfluorene) are reported for the first time. We have observed significant changes in the π-electronic structure of the title molecules on substitution at 2-, 7-, and 9-positions and interpreted them within the theoretical framework of resonance and inductive effects. The substituents attached to fluorene at these positions govern the photophysical behaviour and properties of polymetallaynes that contain the fluorene moiety. The mediated properties include the size of the polymer bandgap, various non-linear optical properties, and the intensity and lifetime of luminescence processes. Our spectral results provide some detailed explanations of substituent influences in the form of, for example, orbital ionization energies, which can be further related to charge-transfer processes present in these metallo-organic polymers.
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88
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Chvojka J, Sykora R, Krouzecky A, Radej J, Varnerova V, Karvunidis T, Novak I, Matejovic M. Renal hemodynamic, microcirculatory and metabolic responses to peritonitis-induced acute kidney injury in pigs. Crit Care 2008. [PMCID: PMC4088840 DOI: 10.1186/cc6690] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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89
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Novak I, Harrison LJ, Li W. Photoelectron spectroscopy and substituent effects in halonaphthalenes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2008; 69:78-81. [PMID: 17434335 DOI: 10.1016/j.saa.2007.03.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2006] [Revised: 02/17/2007] [Accepted: 03/13/2007] [Indexed: 05/14/2023]
Abstract
The electronic structure of two isomeric dibromonaphthalenes (C(10)H(6)Br(2)) has been investigated by HeI/HeII photoelectron spectroscopy. The spectra were assigned by Green's functions calculations and comparison with the spectra of related dibromobenzenes (C(6)H(4)Br(2)). The analysis of pi-orbital and halogen lone pair ionization energies, enabled us to determine the magnitude of bromine-bromine intramolecular interactions and distinguish between through-bond and through-space type interactions. We also discuss the halogen-halogen interactions in other polynuclear aromatics.
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90
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Sykora R, Chvojka J, Krouzecky A, Radej J, Varnerova V, Karvunidis T, Novak I, Matejovic M. Coupled plasma filtration adsorption in peritonitis-induced porcine hyperdynamic septic shock. Crit Care 2008. [PMCID: PMC4088831 DOI: 10.1186/cc6681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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91
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Novak I. Purinergic receptors in the endocrine and exocrine pancreas. Purinergic Signal 2007; 4:237-53. [PMID: 18368520 DOI: 10.1007/s11302-007-9087-6] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2007] [Accepted: 11/06/2007] [Indexed: 11/28/2022] Open
Abstract
The pancreas is a complex gland performing both endocrine and exocrine functions. In recent years there has been increasing evidence that both endocrine and exocrine cells possess purinergic receptors, which influence processes such as insulin secretion and epithelial ion transport. Most commonly, these processes have been viewed separately. In beta cells, stimulation of P2Y(1) receptors amplifies secretion of insulin in the presence of glucose. Nucleotides released from secretory granules could also contribute to autocrine/paracrine regulation in pancreatic islets. In addition to P2Y(1) receptors, there is also evidence for other P2 and adenosine receptors in beta cells (P2Y(2), P2Y(4), P2Y(6), P2X subtypes and A(1) receptors) and in glucagon-secreting alpha cells (P2X(7), A(2) receptors). In the exocrine pancreas, acini release ATP and ATP-hydrolysing and ATP-generating enzymes. P2 receptors are prominent in pancreatic ducts, and several studies indicate that P2Y(2), P2Y(4), P2Y(11), P2X(4) and P2X(7) receptors could regulate secretion, primarily by affecting Cl(-) and K(+) channels and intracellular Ca(2+) signalling. In order to understand the physiology of the whole organ, it is necessary to consider the full complement of purinergic receptors on different cells as well as the structural and functional relation between various cells within the whole organ. In addition to the possible physiological function of purinergic receptors, this review analyses whether the receptors could be potential therapeutic targets for drug design aimed at treatment of pancreatic diseases.
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92
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Hamer G, Novak I, Kouznetsova A, Höög C. Disruption of pairing and synapsis of chromosomes causes stage-specific apoptosis of male meiotic cells. Theriogenology 2007; 69:333-9. [PMID: 17997150 DOI: 10.1016/j.theriogenology.2007.09.029] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2007] [Revised: 09/25/2007] [Accepted: 09/25/2007] [Indexed: 11/20/2022]
Abstract
During meiosis, DNA replication is followed by two successive rounds of chromosome segregation (meiosis I and II), which give rise to genetically diverse haploid gametes. The prophase of the first meiotic division is highly regulated and alignment and synapsis of the homologous chromosomes during this stage are mediated by the synaptonemal complex. Incorrect assembly of the synaptonemal complex results in cell death, impaired meiotic recombination and aneuploidy. Oocytes with meiotic defects often survive the first meiotic prophase and give rise to aneuploid gametes. Similarly affected spermatocytes, on the other hand, almost always undergo apoptosis at a male-specific meiotic checkpoint, located specifically at epithelial stage IV during spermatogenesis. Many examples of this stage IV-specific arrest have been described for several genetic mouse models in which DNA repair or meiotic recombination are abrogated. Interestingly, in C. elegans, meiotic recombination and synapsis are monitored by two separate checkpoint pathways. Therefore we studied spermatogenesis in several knockout mice (Sycp1(-/-), Sycp3(-/-), Smc1beta(-/-) and Sycp3/Sycp1 and Sycp3/Smc1beta double-knockouts) that are specifically defective in meiotic pairing and synapsis. Like for recombination defects, we found that all these genotypes also specifically arrest at epithelial stage IV. It seems that the epithelial stage IV checkpoint eliminates spermatocytes that fail a certain quality check, being either synapsis or DNA damage related.
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94
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Novak I, Kovač B. On the aromaticity of trimethylboroxine: A photoelectron spectroscopic study. Chem Phys Lett 2007. [DOI: 10.1016/j.cplett.2007.04.028] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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95
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Novak I, Harrison LJ, Li W, Kovac B. Molecular and Electronic Structure of 1,8-Peribridged Naphthalenes. J Phys Chem A 2007; 111:2619-24. [PMID: 17388343 DOI: 10.1021/jp0673664] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The crystal and molecular structure of 1,8-thianaphthalene has been determined and compared with other single-atom peribridged naphthalenes (SAPN). The measured CSC angle is 73.06 degrees, which is the smallest bridging angle yet recorded for a SAPN derivative. The ab initio calculations using G3(MP2)//B3LYP method were performed for peribridged naphthalenes in order to determine how the strain of the four-membered ring is influenced by the type of bridge linking 1,8 positions. The electronic structure of 1,8-thia- and 1,8-sulfonenaphthalenes has been studied by UV photoelectron spectroscopy. We have tried to identify and distinguish the strain effect on the electronic structure of the naphthalene moiety.
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Krouzecky A, Matejovic M, Radej J, Rokyta R, Novak I. Perfusion pressure manipulation in porcine sepsis: effects on intestinal hemodynamics. Physiol Res 2007; 55:527-533. [PMID: 16343046 DOI: 10.33549/physiolres.930821] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
Limited information is available about selection of the threshold for arterial blood pressure in critically ill patients, particularly in sepsis when normal organ blood flow autoregulation may be altered. The present experimental study investigated whether increasing perfusion pressure using norepinephrine in normotensive hyperdynamic porcine bacteremia affects intestinal macro- and microcirculation. Nine pigs received continuous i.v. administration of Pseudomonas aeruginosa (PSAE) to develop hyperdynamic, normotensive (mean arterial pressure [MAP] 65 mm Hg) sepsis. Norepinephrine was used to achieve 10-15 % increase in MAP. Mesenteric arterial blood flow (Q(gut)), ileal mucosal microvascular perfusion (LDF(gut)) and ileal-end-tidal PCO(2) gap (PCO(2) gap) were measured before norepinephrine, after 60 min of norepinephrine infusion and 60 min after norepinephrine infusion had been discontinued. During a 12 h period of PSAE infusion all pigs developed hyperdynamic circulation with significantly decreased MAP. Although the mesenteric blood flow remained unchanged, infusion of PSAE resulted in a gradual fall of ileal microvascular perfusion, which was associated with progressively rising PCO(2) gap. Norepinephrine which induced a 10-15 % increase in perfusion pressure (i.e. titrated to attain near baseline values of MAP) affected neither Q(gut) nor the intestinal blood flow distribution (Q(gut)/CO). Similarly, norepinephrine did not change either LDF(gut) or PCO(2) gap. In this hyperdynamic, normotensive porcine bacteremia, norepinephrine-induced increase in perfusion pressure exhibited neither beneficial nor deleterious effects on intestinal macrocirculatory blood flow and ileal mucosal microcirculation. The lack of changes suggests that the gut perfusion was within its autoregulatory range.
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Abstract
The thermochemistry of bicyclic lactams (penams, penems, cephams, cephems), which are key pharmacophores in beta-lactam antibiotics, has been investigated by high-level ab initio methods. Particular attention has been paid to estimating magnitudes of amide resonance (ARE) and ring strain (RSE) in the four-member lactam ring because these quantities are difficult to measure and distinguish experimentally. The ring strain destabilization effect is greater than the stabilization arising from amide resonance. However, in cephemes the amide resonance stabilization slightly exceeds destabilization due to the beta-lactam ring strain.
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98
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Novak I, Kovac B. Photochemistry via Photoelectron Spectroscopy: N-Substituted Phthalimides. J Phys Chem A 2006; 110:7772-6. [PMID: 16789761 DOI: 10.1021/jp057269v] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The electronic structures of several N-substituted phthalimides have been investigated by UV photoelectron spectroscopy and outer valence Greens function calculations. Some spectra reveal the presence of photofragmentation and photoelimination processes related to the decay of the aminium radical cation. We compared the fragmentation mechanisms in the gas phase and in the solution.
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Radej J, Matejovic M, Krouzecky A, Kulda J, Novak M, Novak I. Treatment of a massive pulmonary embolism using pulse-spray thrombolysis in a patient with central nervous system infection: a risk or the adequate choice? Acta Anaesthesiol Scand 2006; 50:645-6. [PMID: 16643253 DOI: 10.1111/j.1399-6576.2006.00959.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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100
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Cusick A, McIntyre S, Novak I, Lannin N, Lowe K. A comparison of goal attainment scaling and the Canadian Occupational Performance Measure for paediatric rehabilitation research. PEDIATRIC REHABILITATION 2006; 9:149-57. [PMID: 16449074 DOI: 10.1080/13638490500235581] [Citation(s) in RCA: 127] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
PURPOSE To investigate the relative utility of Canadian Occupational Performance Measure (COPM) (adapted for children) and Goal Attainment Scaling (GAS) as outcome measures for paediatric rehabilitation. METHODS A two-group pre-post design investigated the impact of a 3-month programme. Forty-one children with spastic hemiplegic cerebral palsy (mean 3.9 years; GMPM level 1; 21 boys, 10 girls) were randomized to occupational therapy only and occupational therapy plus one Botulinum Toxin A injection. The latter was considered a 'proven' intervention for the purpose of this instrumentation study. Intervention impact was investigated using GAS and COPM. Instrument sensitivity, convergent validity, goal/problem profiles and administration were evaluated. RESULTS Both instruments were sensitive to within group change and detected significant between group change. Likert scale coding for GAS scores was more sensitive than the traditional weighted GAS or COPM. Different constructs were measured by each instrument. COPM was more time efficient in training, development and administration. CONCLUSION Study aim, logistic and resource factors should guide the choice of COPM and/or GAS instruments as both are sensitive to change with a proven intervention and both evaluate different constructs.
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