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Shinoura N, Yamada R, Kodama T, Suzuki Y, Takahashi M, Yagi K. Association of Motor Deficits with Head Position during Awake Surgery for Resection of Medial Motor Area Brain Tumors. ACTA ACUST UNITED AC 2005; 48:315-21. [PMID: 16432778 DOI: 10.1055/s-2005-915627] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
OBJECTIVE Resection of tumors involving the motor area frequently results in postoperative motor deficits. In an attempt to prevent poor motor outcomes, our institution has utilized preoperative fMRI and tractography as well as intraoperative cortical mapping and continuous motor tasks during awake surgery in patients with motor area tumors. In one case, a patient demonstrated deterioration in continuous motor task performance before initiation of tumor resection. Thus, the goal of this study was to evaluate the relationship between head position and development of intraoperative or postoperative motor deficits in five patients with motor area tumors. CLINICAL PRESENTATION In four cases, the patient's head was rotated 60 degrees from the supine position. In two cases, in which the tumor was located relatively medially, deterioration in continuous motor task function was noted prior to resection of the tumor. In the two other cases, in which the tumor was located relatively laterally, there was no deterioration of continuous motor task performance until resection of the tumor. Another patient, in whom the tumor was located relatively medially, underwent surgery with the head positioned straight and with the patient in a half-sitting position. This patient did not experience deterioration of continuous motor task performance during the surgery. CONCLUSION These data suggest that head positioning can have a significant impact on motor function in patients with motor area tumors. Furthermore, the straight head position may be the preferred positioning, particularly for patients with tumors located on the medial side of motor area.
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Taki N, Sasaki-Sekimoto Y, Obayashi T, Kikuta A, Kobayashi K, Ainai T, Yagi K, Sakurai N, Suzuki H, Masuda T, Takamiya KI, Shibata D, Kobayashi Y, Ohta H. 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. PLANT PHYSIOLOGY 2005; 139:1268-83. [PMID: 16258017 PMCID: PMC1283764 DOI: 10.1104/pp.105.067058] [Citation(s) in RCA: 362] [Impact Index Per Article: 19.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Jasmonic acid (JA) and methyl jasmonate (MeJA), collectively known as JAs, regulate diverse physiological processes in plants, including the response to wounding. Recent reports suggest that a cyclopentenone precursor of JA, 12-oxo-phytodienoic acid (OPDA), can also induce gene expression. However, little is known about the physiological significance of OPDA-dependent gene expression. We used microarray analysis of approximately 21,500 Arabidopsis (Arabidopsis thaliana) genes to compare responses to JA, MeJA, and OPDA treatment. Although many genes responded identically to both OPDA and JAs, we identified a set of genes (OPDA-specific response genes [ORGs]) that specifically responded to OPDA but not to JAs. ORGs primarily encoded signaling components, transcription factors, and stress response-related genes. One-half of the ORGs were induced by wounding. Analysis using mutants deficient in the biosynthesis of JAs revealed that OPDA functions as a signaling molecule in the wounding response. Unlike signaling via JAs, OPDA signaling was CORONATINE INSENSITIVE 1 independent. These results indicate that an OPDA signaling pathway functions independently of JA/MeJA signaling and is required for the wounding response in Arabidopsis.
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Taki N, Sasaki-Sekimoto Y, Obayashi T, Kikuta A, Kobayashi K, Ainai T, Yagi K, Sakurai N, Suzuki H, Masuda T, Takamiya KI, Shibata D, Kobayashi Y, Ohta H. 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. PLANT PHYSIOLOGY 2005. [PMID: 16258017 DOI: 10.1104/pp.105.067058.1268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Jasmonic acid (JA) and methyl jasmonate (MeJA), collectively known as JAs, regulate diverse physiological processes in plants, including the response to wounding. Recent reports suggest that a cyclopentenone precursor of JA, 12-oxo-phytodienoic acid (OPDA), can also induce gene expression. However, little is known about the physiological significance of OPDA-dependent gene expression. We used microarray analysis of approximately 21,500 Arabidopsis (Arabidopsis thaliana) genes to compare responses to JA, MeJA, and OPDA treatment. Although many genes responded identically to both OPDA and JAs, we identified a set of genes (OPDA-specific response genes [ORGs]) that specifically responded to OPDA but not to JAs. ORGs primarily encoded signaling components, transcription factors, and stress response-related genes. One-half of the ORGs were induced by wounding. Analysis using mutants deficient in the biosynthesis of JAs revealed that OPDA functions as a signaling molecule in the wounding response. Unlike signaling via JAs, OPDA signaling was CORONATINE INSENSITIVE 1 independent. These results indicate that an OPDA signaling pathway functions independently of JA/MeJA signaling and is required for the wounding response in Arabidopsis.
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Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest ARR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SPT, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CAM, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y. The transcriptional landscape of the mammalian genome. Science 2005; 309:1559-63. [PMID: 16141072 DOI: 10.1126/science.1112014] [Citation(s) in RCA: 2632] [Impact Index Per Article: 138.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
This study describes comprehensive polling of transcription start and termination sites and analysis of previously unidentified full-length complementary DNAs derived from the mouse genome. We identify the 5' and 3' boundaries of 181,047 transcripts with extensive variation in transcripts arising from alternative promoter usage, splicing, and polyadenylation. There are 16,247 new mouse protein-coding transcripts, including 5154 encoding previously unidentified proteins. Genomic mapping of the transcriptome reveals transcriptional forests, with overlapping transcription on both strands, separated by deserts in which few transcripts are observed. The data provide a comprehensive platform for the comparative analysis of mammalian transcriptional regulation in differentiation and development.
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Sugimoto K, Yanagida H, Yagi K, Kuwajima H, Okada M, Takemura T. A Japanese family with Alport syndrome associated with esophageal leiomyomatosis: genetic analysis of COL4A5 to COL4A6 and immunostaining for type IV collagen subtypes. Clin Nephrol 2005; 64:144-50. [PMID: 16114791 DOI: 10.5414/cnp64144] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND In some families, X-linked Alport syndrome (AS) is associated with diffuse leiomyomatosis. We describe clinical, pathologic and molecular-genetic findings in a Japanese family with this inheritance mode of AS in association with leiomyomatosis. PATIENT AS was diagnosed in a one-year-old boy with recurrent aspiration pneumonia caused by esophageal stenosis from leiomyomatosis. Diagnosis was confirmed by electron microscopy coupled with type IV collagen chain subtype staining in a renal biopsy specimen. His mother, who exhibited esophageal leiomyomatosis and is heterozygous for AS, showed a discontinuous staining pattern for collagen alpha5(IV) chain along the epidermal basement membrane in a skin biopsy specimen. Genetic analysis in the boy revealed the deletion of the first two exons of COL4A6 together with deletion of the 5' end of COL4A5. Despite administration of cyclosporin A, massive proteinuria has persisted in the boy, although renal function otherwise remains normal. CONCLUSION Identification of an AS patient during infancy is extremely rare. Clinical manifestations, including macroscopic hematuria, cataracts and leiomyomatosis caused by the large deletion involving COL4A5 to COL4A6, led to early presentation with AS.
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Abstract
Endoscopic diagnosis of Helicobacter pylori infection, before biopsies and serological tests are performed, is possible through careful analysis of the network of superficial vessels in patients with gastritis. At standard endoscopy, a regular arrangement of the collecting venules (RAC) is visible as numerous minute red points in the corpus of the noninfected stomach, and is not visible in H. pylori gastritis. Magnifying endoscopy provides more precise information concerning the collecting venules, the network of capillaries surrounding the gastric pits, the swelling of the surface epithelium between pits, and the enlargement and destruction of the pits. The magnified appearance is classified as Z-0 (noninfected stomach) or as Z-1 to Z-3 for successive degrees of mucosal damage in the infected stomach. Histological controls confirm the reliability of the endoscopic classification. Magnifying endoscopy also proves helpful in the assessment of completeness of eradication of H. pylori.
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Shinoura N, Yamada R, Kodama T, Suzuki Y, Takahashi M, Yagi K. Preoperative fMRI, Tractography and Continuous Task during Awake Surgery for Maintenance of Motor Function Following Surgical Resection of Metastatic Tumor Spread to the Primary Motor Area. ACTA ACUST UNITED AC 2005; 48:85-90. [PMID: 15906202 DOI: 10.1055/s-2004-830227] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
The goal of the present study was to determine the efficacy of preoperative fMRI, tractography, and intraoperative continuous task during awake surgery in preserving postoperative motor function in patients undergoing resection of metastatic brain tumors in or near the primary motor area. Three patients with metastatic brain tumors in the primary motor area elected to undergo surgical treatment. Preoperative fMRI and tractography were performed, and various primary motor areas (e. g., hand, arm, face and leg) were identified and confirmed by cortical mapping or by the outcome of awake surgery. Cortical mapping and continuous appropriate task were performed during awake surgery. Preoperative fMRI and tractography correctly identified the primary motor area. In contrast, cortical mapping identified the gyrus of the primary motor area but was unable to identify specific primary motor areas, such as those for the hand or arm, which were compressed by the tumor. Tumor resection was terminated when any deterioration in continuous task performance was observed during awake surgery. Paresis was transient and resolved within one week in all cases. The combination of preoperative fMRI, tractography and continuous task during awake surgery helped to maintain motor function following surgical management of metastatic brain tumors of the primary motor cortex.
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Li C, Schilmiller AL, Liu G, Lee GI, Jayanty S, Sageman C, Vrebalov J, Giovannoni JJ, Yagi K, Kobayashi Y, Howe GA. Role of beta-oxidation in jasmonate biosynthesis and systemic wound signaling in tomato. THE PLANT CELL 2005; 17:971-86. [PMID: 15722469 PMCID: PMC1069712 DOI: 10.1105/tpc.104.029108] [Citation(s) in RCA: 213] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Jasmonic acid (JA) is a lipid-derived signal that regulates plant defense responses to biotic stress. Here, we report the characterization of a JA-deficient mutant of tomato (Lycopersicon esculentum) that lacks local and systemic expression of defensive proteinase inhibitors (PIs) in response to wounding. Map-based cloning studies demonstrated that this phenotype results from loss of function of an acyl-CoA oxidase (ACX1A) that catalyzes the first step in the peroxisomal beta-oxidation stage of JA biosynthesis. Recombinant ACX1A exhibited a preference for C12 and C14 straight-chain acyl-CoAs and also was active in the metabolism of C18 cyclopentanoid-CoA precursors of JA. The overall growth, development, and reproduction of acx1 plants were similar to wild-type plants. However, the mutant was compromised in its defense against tobacco hornworm (Manduca sexta) attack. Grafting experiments showed that loss of ACX1A function disrupts the production of the transmissible signal for wound-induced PI expression but does not affect the recognition of this signal in undamaged responding leaves. We conclude that ACX1A is essential for the beta-oxidation stage of JA biosynthesis and that JA or its derivatives is required both for antiherbivore resistance and the production of the systemic wound signal. These findings support a role for peroxisomes in the production of lipid-based signaling molecules that promote systemic defense responses.
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Yagi K, Kageji T, Nagahiro S, Murayama Y. Multiple cystic cavernous angiomas associated with hemorrhage. Acta Neurochir (Wien) 2005; 147:201-3; discussion 203. [PMID: 15365796 DOI: 10.1007/s00701-004-0381-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2003] [Accepted: 07/20/2004] [Indexed: 11/28/2022]
Abstract
A 29-year-old man presented with impaired mental concentration and inability to remember. Magnetic resonance and computed tomography studies revealed multiple calcified cysts. Craniotomy was performed and one of the lesions was resected. The histological diagnosis was cavernous angioma. The first report of multiple cystic cavernous angiomas is reported.
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Sawada A, Inoue M, Yasui M, Yoshimoto T, Nakano T, Miyamura T, Koyama M, Sato E, Okamura T, Yagi K, Kawa K. P-99 The evolution of the strategy for MDS/JMML in Osaka Medical Center for maternal and child health. Leuk Res 2005. [DOI: 10.1016/s0145-2126(05)80163-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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87
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Yagi K, Kawano M, Haraki T, Higashikata T, Ueda K, Okada T, Koni I, Mabuchi H. Long-term efficacy of immunoadsorbent plasmapheresis in a patient with Budd-Chiari syndrome due to antiphospholipid syndrome: case report with nine-year follow-up. Lupus 2004; 13:135-8. [PMID: 14995008 DOI: 10.1191/0961203304lu486cr] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
We describe the safety and efficacy of long-term immunoadsorbent plasmapheresis (IAPP) with dextran sulfate-cellulose bead columns in antiphospholipid syndrome (APS). IAPP was administered to a 38-year old male Japanese patient with APS with Budd-Chiari syndrome (BCS), who had presented with refractory lower leg skin ulcers and arterial and venous thromboses including BCS. After hepatic vein transluminal angioplasty was performed, the combination of corticosteroid, aspirin and IAPP was administered because of an underlying bleeding tendency related to liver dysfunction. From February 1994 to February 2003, a total of 228 procedures were performed. No further thrombosis-related symptoms or bleeding have occurred for more than nine years, suggesting that IAPP with dextran sulfate cellulose columns is safe and effective for APS in preventing additional thrombotic events. This IAPP supplements anticoagulation, antiplatelet, corticosteroid and immunosuppressant therapies.
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88
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Yagi K, Kobayashi J, Yasue S, Yamaguchi M, Shiobara S, Mabuchi H. Four unrelated cases with Takayasu arteritis and CD36 deficiency: possible link between these disorders. J Intern Med 2004; 255:688-9. [PMID: 15147534 DOI: 10.1111/j.1365-2796.2004.01325.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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89
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Takemura T, Yanagida H, Yagi K, Moriwaki K, Okada M. Alport syndrome and benign familial hematuria (thin basement membrane disease) in two brothers of a family with hematuria. Clin Nephrol 2003; 60:195-200. [PMID: 14524583 DOI: 10.5414/cnp60195] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Alport syndrome (AS) and benign familial hematuria (BFH) are inherited disorders of the glomerular basement membrane, which are sometimes difficult to differentiate at the early stage without type IV collagen staining of the renal basement membrane. Previous studies have indicated that mutation of type IV collagen alpha4 gene may be responsible for both BFH and AS. We report here a Japanese family with consanguinity, in which autosomal-recessive AS and BFH were separately identified in two brothers on the basis of findings of electron microscopy and type IV collagen chain staining of the renal biopsy specimens. Their parents, being first cousins, paternal uncle and grandmothers were found to have hematuria. Our observations suggest that BFH patients were heterozygous carriers of autosomal-recessive AS.
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90
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Hada T, Onaka T, Takahashi T, Hiraga A, Yagi K. Effects of novelty stress on neuroendocrine activities and running performance in thoroughbred horses. J Neuroendocrinol 2003; 15:638-48. [PMID: 12787048 DOI: 10.1046/j.1365-2826.2003.01042.x] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
This study investigated the effects of novelty stress on neuroendocrine activities and running performance in Thoroughbred horses. First, to examine the neuroendocrine responses to novelty stress, we exposed horses to two types of novel environmental stimuli (audiovisual or novel field stimuli). After the stimuli, plasma concentrations of vasopressin, catecholamines and adrenocorticotropin (ACTH), as well as heart rates, were significantly increased in each experiment. Second, we investigated neuroendocrine activities during incremental exercise. Plasma concentrations of vasopressin, catecholamines, ACTH and blood lactate increased as the exercise load increased. Finally, we investigated the effects of novelty stimuli on neuroendocrine activities and running performance during supra-maximal exercise (110% VHRmax). When the novelty stimuli were presented to horses, the increases in plasma vasopressin and catecholamines due to exercise load were significantly smaller than those in the control experiments. Blood lactate during supra-maximal exercise was also significantly lower and total run time until exhaustion was prolonged in the novel environmental stimuli compared to the control. These results suggest that novelty stimuli facilitate vasopressin release from the posterior pituitary in addition to activating the sympatho-adrenomedullary and the hypothalamic-pituitary-adrenocortical axes in thoroughbred horses, and increase exercise capacity, resulting in improvement of running performance during supra-maximal exercise.
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91
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Yagi K, Tsuji K, Nifuji A, Shinomiya K, Nakashima K, DeCrombrugghe B, Noda M. Bone morphogenetic protein-2 enhances osterix gene expression in chondrocytes. J Cell Biochem 2003; 88:1077-83. [PMID: 12647290 DOI: 10.1002/jcb.10467] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Osterix is a recently identified zinc-finger-containing transcription factor, which is required for skeletogenesis as no bone formation was observed in osterix-deficient mice. Osterix was first cloned as a gene whose expression was enhanced by BMP in C2C12 cells. As BMP induces ectopic bone formation in vivo via a pathway reminiscent to endochondral bone formation, BMP may also regulate osterix gene expression in chondrocytes. However, no information was available regarding the BMP actions on osterix gene expression in chondrocytes. We therefore examined the effects of BMP-2 on osterix gene expression in chondrocytes in culture. RT-PCR analysis indicated that osterix mRNA was expressed in the primary cultures of chondrocytes derived from mouse rib cartilage. The treatment with BMP-2 enhanced the levels of osterix transcripts within 24 h and the enhancement was still observed at 48 h based on RT-PCR analysis. This BMP effect was specific to this cytokine, as TGF-beta did not alter osterix gene expression. BMP effects on the osterix mRNA levels were also confirmed by Northern blot analysis. The enhancing effect of BMP on osterix gene expression was observed in a dose-dependent manner starting at 200 ng/ml. The BMP enhancement of the osterix gene expression in chondrocytes was blocked in the presence of a protein synthesis inhibitor, cycloheximide, while it was still observed in the presence of 5,6-dichloro-1-beta D-ribofuranosylbenzimidazol (DRB) suggesting the involvement of post-transcriptional events, which require new protein synthesis. These results indicated that osterix gene is expressed in the primary cultures of chondrocytes and its expression is under the control of BMP-2.
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Higashiyama S, Noda M, Kawase M, Yagi K. Mixed-ligand modification of polyamidoamine dendrimers to develop an effective scaffold for maintenance of hepatocyte spheroids. J Biomed Mater Res A 2003; 64:475-82. [PMID: 12579561 DOI: 10.1002/jbm.a.10419] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Compared with a monolayer culture, hepatocyte spheroids are known to maintain liver function for long periods. We found that hepatocytes formed spheroids when cultured on polyamidoamine dendrimers modified with fructose. Because galactose is a ligand for the asialoglycoprotein receptor on the hepatocyte cytoplasmic membrane, it was chosen as another ligand for modification in order to maintain adhesion of spheroids for long periods. Simultaneous modification of dendrimers with fructose and galactose had a marked effect on the time length of spheroid adhesion. Suppression of apoptosis and necrosis was observed in hepatocyte spheroids cultured on a dendrimer modified with fructose and galactose (F/G dendrimer). Moreover, the hepatocyte spheroids cultured on the F/G dendrimer had higher activities of liver-specific functions, such as urea synthesis and albumin gene expression, than did those cultured on single-ligand-modified dendrimers. The expression of heat shock protein (HSP) genes was examined to evaluate the stress response of cells to scaffolds. The hepatocytes cultured on the F/G dendrimer had very low expression levels of both HSP60 and HSP70 mRNAs. Thus immobilization of mixed-ligand-modified dendrimers could generate a suitable surface for hepatocyte spheroid formation. These dendrimers could be a powerful tool for generating custom-made scaffolds for cells other than hepatocytes by selecting the ligands suitable for each cell type.
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Okamura T, Kishimoto T, Inoue M, Honda M, Yamashita N, Wakiguchi H, Yagita M, Hosoi G, Sako M, Yasui M, Yagi K, Kawa K. Unrelated bone marrow transplantation for Epstein-Barr virus-associated T/NK-cell lymphoproliferative disease. Bone Marrow Transplant 2003; 31:105-11. [PMID: 12621491 DOI: 10.1038/sj.bmt.1703796] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Epstein-Barr virus (EBV)-associated T/NK-cell lymphoproliferative disease (LPD) has been linked to several different disorders, including chronic active EBV infection, EBV-associated hemophagocytic syndrome, hypersensitivity to mosquito bites, hydroa vacciniforme, aggressive NK-cell leukemia, and nasal/nasal-type NK-cell lymphoma. In most instances, these disorders are refractory to conventional treatments and have a poor prognosis. Here, we report a new treatment strategy for EBV-associated T/NK-cell LPD, consisting of immunochemotherapy, intensive combination chemotherapy, and stem cell transplantation. The five patients studied, two with T-cell and three with NK-cell LPD, lacked a human leukocyte antigen-matched, related donor, and therefore received bone marrow grafts from HLA-matched, unrelated donors. The preconditioning regimen consisted of total-body irradiation (12 Gy), etoposide (900 mg/m(2)), and cyclophosphamide (120 mg/kg) or melphalan (210 mg/m(2)). All patients had residual LPD by a quantitative PCR technique prior to transplantation. After unrelated bone marrow transplantation (UBMT), four of the five patients remain in continuous complete remission at a median of 19 months, without detectable EBV-DNA in peripheral blood. Thus, UBMT appears to be a reasonable option for the treatment of patients with EBV-associated T/NK-cell LPD. Detection of EBV-DNA by PCR offers an important tool for assessing minimal residual disease in patients with EBV-associated T/NK-cell LPD.
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Wang CP, Yagi K, Lin PJ, Jin DY, Makabe KW, Stafford DW. Identification of a gene encoding a typical gamma-carboxyglutamic acid domain in the tunicate Halocynthia roretzi. J Thromb Haemost 2003; 1:118-23. [PMID: 12871548 DOI: 10.1046/j.1538-7836.2003.00069.x] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
We report the identification of a gene capable of encoding a novel Gla (gamma-carboxyglutamic acid) protein from the tunicate Halocynthia roretzi, a primitive member of the phylum Chordata. We call this new hypothetical protein Gla-RTK; it has a Gla domain typical of human vitamin K-dependent coagulation factors, a transmembrane domain, and a receptor tyrosine kinase domain. The receptor tyrosine kinase domain is very similar to the ARK (adhesion-related kinase) family of receptor tyrosine kinases. The ARK family includes Axl, Tyro3, and c-Mer. This gene also encodes a propeptide that binds to the human gamma-glutamyl carboxylase within a range of affinities observed for mammalian propeptides. The cDNA for this putative protein is found distributed throughout the oocyte and embryo but the cDNA is apparently not transcribed except during oogenesis. One of the most interesting aspects of this hypothetical protein is that its Gla domain is highly homologous to the Gla domain of Gas6, a ligand for Axl, while its receptor tyrosine kinase domain is highly homologous to Axl.
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Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CAM, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature 2002; 420:563-73. [PMID: 12466851 DOI: 10.1038/nature01266] [Citation(s) in RCA: 1226] [Impact Index Per Article: 55.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2002] [Accepted: 10/28/2002] [Indexed: 01/10/2023]
Abstract
Only a small proportion of the mouse genome is transcribed into mature messenger RNA transcripts. There is an international collaborative effort to identify all full-length mRNA transcripts from the mouse, and to ensure that each is represented in a physical collection of clones. Here we report the manual annotation of 60,770 full-length mouse complementary DNA sequences. These are clustered into 33,409 'transcriptional units', contributing 90.1% of a newly established mouse transcriptome database. Of these transcriptional units, 4,258 are new protein-coding and 11,665 are new non-coding messages, indicating that non-coding RNA is a major component of the transcriptome. 41% of all transcriptional units showed evidence of alternative splicing. In protein-coding transcripts, 79% of splice variations altered the protein product. Whole-transcriptome analyses resulted in the identification of 2,431 sense-antisense pairs. The present work, completely supported by physical clones, provides the most comprehensive survey of a mammalian transcriptome so far, and is a valuable resource for functional genomics.
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MESH Headings
- Alternative Splicing/genetics
- Amino Acid Motifs
- Animals
- Chromosomes, Mammalian/genetics
- Cloning, Molecular
- DNA, Complementary/genetics
- Databases, Genetic
- Expressed Sequence Tags
- Genes/genetics
- Genomics/methods
- Humans
- Membrane Proteins/genetics
- Mice/genetics
- Physical Chromosome Mapping
- Protein Structure, Tertiary
- Proteome/chemistry
- Proteome/genetics
- RNA, Antisense/genetics
- RNA, Messenger/analysis
- RNA, Messenger/genetics
- RNA, Untranslated/analysis
- RNA, Untranslated/genetics
- Transcription Initiation Site
- Transcription, Genetic/genetics
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96
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Hashizume H, Ito S, Yagi K, Kitajima S. Proposal of mechanically jointed superconducting magnet using high critical temperature superconductors. FUSION ENGINEERING AND DESIGN 2002. [DOI: 10.1016/s0920-3796(02)00271-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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97
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Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, El Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Perdekamp MG, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov V, Koehler D, Kohama T, Kotchetkov D, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Palounek APT, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, Van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S. Flow measurements via two-particle azimuthal correlations in Au + Au collisions at sqrt [s(NN)]=130 GeV. PHYSICAL REVIEW LETTERS 2002; 89:212301. [PMID: 12443403 DOI: 10.1103/physrevlett.89.212301] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2002] [Indexed: 05/24/2023]
Abstract
Two-particle azimuthal correlation functions are presented for charged hadrons produced in Au+Au collisions at the Relativistic Heavy Ion Collider (sqrt [s(NN)]=130 GeV). The measurements permit determination of elliptic flow without event-by-event estimation of the reaction plane. The extracted elliptic flow values (v2) show significant sensitivity to both the collision centrality and the transverse momenta of emitted hadrons, suggesting rapid thermalization and relatively strong velocity fields. When scaled by the eccentricity of the collision zone epsilon, the scaled elliptic flow shows little or no dependence on centrality for charged hadrons with relatively low p(T). A breakdown of this epsilon scaling is observed for charged hadrons with pT >1.0 GeV/c.
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98
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Tajiri H, Doi T, Endo H, Nishina T, Terao T, Hyodo I, Matsuda K, Yagi K. Routine endoscopy using a magnifying endoscope for gastric cancer diagnosis. Endoscopy 2002; 34:772-7. [PMID: 12244497 DOI: 10.1055/s-2002-34267] [Citation(s) in RCA: 75] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
BACKGROUND AND STUDY AIMS It has been reported that the fine mucosal patterns of the gastric pits can be observed with magnification and this may assist in preliminary evaluation prior to histological diagnosis. The aim of this prospective study was to clarify the relationship between the fine mucosal patterns of gastric lesions and histological findings, and also to evaluate the usefulness of magnifying endoscopy during routine endoscopy. PATIENTS AND METHODS A recently developed magnifying video endoscope, which enables magnification up to 80 times, was used for gastrointestinal endoscopy in 318 patients between January 2000 and January 2001, at the National Shikoku Cancer Center. In total, 232 lesions were detected. However, patients diagnosed by conventional endoscopy as having advanced gastric cancer, malignant lymphoma, or submucosal tumor were excluded from the study. The endoscopic findings for 211 lesions included in this study were compared with the histological findings. RESULTS Coarse and irregular mucosal patterns were observed in elevated-type cancers by magnifying endoscopy, and in depressed-type cancers there was a finer pit pattern than in the surrounding mucosa, destruction or disappearance of the mucosal microstructure, and abnormal capillary vessels. The magnifying endoscopy results were closely related to the mucosal microstructure observed by dissecting microscopy and to the histological features. The rate of presumptive diagnosis of small gastric cancers was significantly higher when a magnifying endoscope was used compared with conventional endoscopy. In this study, the sensitivity and specificity of magnifying endoscopy as a diagnostic method were 96.0% and 95.5%, respectively. CONCLUSIONS The fine mucosal patterns and the features of capillary vessels, which were identified with the magnifying endoscope, correlated well with the pathological diagnosis. Magnifying endoscopy will be very useful in predicting the histological diagnosis during routine endoscopic procedures.
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99
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Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, el-Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Grosse Perdekamp M, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov V, Koehler D, Kohama T, Kotchetkov D, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Mukhopadhyay D, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Pal D, Palounek APT, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, Van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S, Zhou S. Measurement of Lambda and Lambda(macro) particles in Au+Au collisions at the square root of S(NN) = 130 GeV. PHYSICAL REVIEW LETTERS 2002; 89:092302. [PMID: 12190391 DOI: 10.1103/physrevlett.89.092302] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2002] [Indexed: 05/23/2023]
Abstract
We present results on the measurement of Lambda and Lambda(macro) production in Au+Au collisions at square root of (S (NN) = 130 GeV with the PHENIX detector at the Relativistic Heavy Ion Collider. The transverse momentum spectra were measured for minimum bias and for the 5% most central events. The Lambda;/Lambda ratios are constant as a function of p(T) and the number of participants. The measured net Lambda density is significantly larger than predicted by models based on hadronic strings (e.g., HIJING) but in approximate agreement with models which include the gluon-junction mechanism.
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100
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Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, El Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Grosse Perdekamp M, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov V, Koehler D, Kohama T, Kotchetkov D, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Palounek APT, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S. Net charge fluctuations in Au + Au interactions at sqrt[s(NN)]=130 GeV. PHYSICAL REVIEW LETTERS 2002; 89:082301. [PMID: 12190459 DOI: 10.1103/physrevlett.89.082301] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2002] [Indexed: 05/23/2023]
Abstract
Data from Au + Au interactions at sqrt[s(NN)]=130 GeV, obtained with the PHENIX detector at the Relativistic Heavy-Ion Collider, are used to investigate local net charge fluctuations among particles produced near midrapidity. According to recent suggestions, such fluctuations may carry information from the quark-gluon plasma. This analysis shows that the fluctuations are dominated by a stochastic distribution of particles, but are also sensitive to other effects, like global charge conservation and resonance decays.
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