76
|
Adler SS, Afanasiev S, Aidala C, Ajitanand NN, Akiba Y, Al-Jamel A, Alexander J, Aoki K, Aphecetche L, Armendariz R, Aronson SH, Averbeck R, Awes TC, Babintsev V, Baldisseri A, Barish KN, Barnes PD, Bassalleck B, Bathe S, Batsouli S, Baublis V, Bauer F, Bazilevsky A, Belikov S, Bjorndal MT, Boissevain JG, Borel H, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy JM, Butsyk S, Camard X, Chand P, Chang WC, Chernichenko S, Chi CY, Chiba J, Chiu M, Choi IJ, Choudhury RK, Chujo T, Cianciolo V, Cobigo Y, Cole BA, Comets MP, Constantin P, Csanád M, Csörgo T, Cussonneau JP, d'Enterria D, Das K, David G, Deák F, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Devismes A, Dietzsch O, Drachenberg JL, Drapier O, Drees A, Durum A, Dutta D, Dzhordzhadze V, Efremenko YV, En'yo H, Espagnon B, Esumi S, Fields DE, Finck C, Fleuret F, Fokin SL, Fox BD, Fraenkel Z, Frantz JE, Franz A, Frawley AD, Fukao Y, Fung SY, Gadrat S, Germain M, Glenn A, Gonin M, Gosset J, Goto Y, Granier de Cassagnac R, Grau N, Greene SV, Grosse Perdekamp M, Gustafsson HA, Hachiya T, Haggerty JS, Hamagaki H, Hansen AG, Hartouni EP, Harvey M, Hasuko K, Hayano R, He X, Heffner M, Hemmick TK, Heuser JM, Hidas P, Hiejima H, Hill JC, Hobbs R, Holzmann W, Homma K, Hong B, Hoover A, Horaguchi T, Ichihara T, Ikonnikov VV, Imai K, Inaba M, Inuzuka M, Isenhower D, Isenhower L, Ishihara M, Issah M, Isupov A, Jacak BV, Jia J, Jinnouchi O, Johnson BM, Johnson SC, Joo KS, Jouan D, Kajihara F, Kametani S, Kamihara N, Kaneta M, Kang JH, Katou K, Kawabata T, Kazantsev A, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim E, Kim GB, Kim HJ, Kinney E, Kiss A, Kistenev E, Kiyomichi A, Klein-Boesing C, Kobayashi H, Kochenda L, Kochetkov V, Kohara R, Komkov B, Konno M, Kotchetkov D, Kozlov A, Kroon PJ, Kuberg CH, Kunde GJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Le Bornec Y, Lebedev A, Leckey S, Lee DM, Leitch MJ, Leite MAL, Li XH, Lim H, Litvinenko A, Liu MX, Maguire CF, Makdisi YI, Malakhov A, Manko VI, Mao Y, Martinez G, Masui H, Matathias F, Matsumoto T, McCain MC, McGaughey PL, Miake Y, Miller TE, Milov A, Mioduszewski S, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mukhopadhyay D, Muniruzzaman M, Nagamiya S, Nagle JL, Nakamura T, Newby J, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Okada H, Okada K, Oskarsson A, Otterlund I, Oyama K, Ozawa K, Pal D, Palounek APT, Pantuev V, Papavassiliou V, Park J, Park WJ, Pate SF, Pei H, Penev V, Peng JC, Pereira H, Peresedov V, Pierson A, Pinkenburg C, Pisani RP, Purschke ML, Purwar AK, Qualls JM, Rak J, Ravinovich I, Read KF, Reuter M, Reygers K, Riabov V, Riabov Y, Roche G, Romana A, Rosati M, Rosendahl SSE, Rosnet P, Rykov VL, Ryu SS, Saito N, Sakaguchi T, Sakai S, Samsonov V, Sanfratello L, Santo R, Sato HD, Sato S, Sawada S, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shimomura M, Sickles A, Silva CL, Silvermyr D, Sim KS, Soldatov A, Soltz RA, Sondheim WE, Sorensen SP, Sourikova IV, Staley F, Stankus PW, Stenlund E, Stepanov M, Ster A, Stoll SP, Sugitate T, Sullivan JP, Takagi S, Takagui EM, Taketani A, Tanaka KH, Tanaka Y, Tanida K, Tannenbaum MJ, Taranenko A, Tarján P, Thomas TL, Togawa M, Tojo J, Torii H, Towell RS, Tram VN, Tserruya I, Tsuchimoto Y, Tydesjö H, Tyurin N, Uam TJ, van Hecke HW, Velkovska J, Velkovsky M, Veszprémi V, Vinogradov AA, Volkov MA, Vznuzdaev E, Wang XR, Watanabe Y, White SN, Willis N, Wohn FK, Woody CL, Xie W, Yanovich A, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang C, Zhou S, Zimányi J, Zolin L, Zong X. Nuclear modification factors for hadrons at forward and backward rapidities in deuteron-gold collisions at sqrt[s(NN)]=200 GeV. PHYSICAL REVIEW LETTERS 2005; 94:082302. [PMID: 15783879 DOI: 10.1103/physrevlett.94.082302] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2004] [Indexed: 05/24/2023]
Abstract
We report on charged hadron production in deuteron-gold reactions at sqrt[s(NN)]=200 GeV. Our measurements in the deuteron direction cover 1.4<eta<2.2, referred to as forward rapidity, and in the gold direction -2.0<eta<-1.4, referred to as backward rapidity, and a transverse momentum range p(T)=0.5-4.0 GeV/c. We compare the relative yields for different deuteron-gold collision centrality classes. We observe a suppression relative to binary collision scaling at forward rapidity, sensitive to low momentum fraction (x) partons in the gold nucleus, and an enhancement at backward rapidity, sensitive to high momentum fraction partons in the gold nucleus.
Collapse
|
77
|
Kobayashi K, Itow Y, Shiozawa M, Yosoi M, Toyokawa H, Akimune H, Ejiri H, Fujimura H, Fujiwara M, Hara K, Hara K, Ishikawa T, Itoh M, Kawabata T, Nakamura M, Sakaguchi H, Sakemi Y, Takeda H, Uchida M, Yamada T, Yasuda Y, Yoshida H, Zegers R. Detection of nuclear de-excitation gamma-rays in water Cherenkov detector. ACTA ACUST UNITED AC 2005. [DOI: 10.1016/j.nuclphysbps.2004.11.206] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
78
|
Adler SS, Afanasiev S, Aidala C, Ajitanand NN, Akiba Y, Al-Jamel A, Alexander J, Aoki K, Aphecetche L, Armendariz R, Aronson SH, Averbeck R, Awes TC, Babintsev V, Baldisseri A, Barish KN, Barnes PD, Bassalleck B, Bathe S, Batsouli S, Baublis V, Bauer F, Bazilevsky A, Belikov S, Bjorndal MT, Boissevain JG, Borel H, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy JM, Butsyk S, Camard X, Chand P, Chang WC, Chernichenko S, Chi CY, Chiba J, Chiu M, Choi IJ, Choudhury RK, Chujo T, Cianciolo V, Cobigo Y, Cole BA, Comets MP, Constantin P, Csanád M, Csörgo T, Cussonneau JP, d'Enterria D, Das K, David G, Deák F, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Devismes A, Dietzsch O, Drachenberg JL, Drapier O, Drees A, Durum A, Dutta D, Dzhordzhadze V, Efremenko YV, En'yo H, Espagnon B, Esumi S, Fields DE, Finck C, Fleuret F, Fokin SL, Fox BD, Fraenkel Z, Frantz JE, Franz A, Frawley AD, Fukao Y, Fung SY, Gadrat S, Germain M, Glenn A, Gonin M, Gosset J, Goto Y, Granier de Cassagnac R, Grau N, Greene SV, Grosse Perdekamp M, Gustafsson HA, Hachiya T, Haggerty JS, Hamagaki H, Hansen AG, Hartouni EP, Harvey M, Hasuko K, Hayano R, He X, Heffner M, Hemmick TK, Heuser JM, Hidas P, Hiejima H, Hill JC, Hobbs R, Holzmann W, Homma K, Hong B, Hoover A, Horaguchi T, Ichihara T, Ikonnikov VV, Imai K, Inaba M, Inuzuka M, Isenhower D, Isenhower L, Ishihara M, Issah M, Isupov A, Jacak BV, Jia J, Jinnouchi O, Johnson BM, Johnson SC, Joo KS, Jouan D, Kajihara F, Kametani S, Kamihara N, Kaneta M, Kang JH, Katou K, Kawabata T, Kazantsev A, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim E, Kim GB, Kim HJ, Kinney E, Kiss A, Kistenev E, Kiyomichi A, Klein-Boesing C, Kobayashi H, Kochetkov V, Kohara R, Komkov B, Konno M, Kotchetkov D, Kozlov A, Kroon PJ, Kuberg CH, Kunde GJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Le Bornec Y, Lebedev A, Leckey S, Lee DM, Leitch MJ, Leite MAL, Li X, Li XH, Lim H, Litvinenko A, Liu MX, Maguire CF, Makdisi YI, Malakhov A, Manko VI, Mao Y, Martinez G, Masui H, Matathias F, Matsumoto T, McCain MC, McGaughey PL, Miake Y, Miller TE, Milov A, Mioduszewski S, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mukhopadhyay D, Muniruzzaman M, Nagamiya S, Nagle JL, Nakamura T, Newby J, Nyanin AS, Nystrand J, O'brien E, Ogilvie CA, Ohnishi H, Ojha ID, Okada H, Okada K, Oskarsson A, Otterlund I, Oyama K, Ozawa K, Pal D, Palounek APT, Pantuev V, Papavassiliou V, Park J, Park WJ, Pate SF, Pei H, Penev V, Peng JC, Pereira H, Peresedov V, Pierson A, Pinkenburg C, Pisani RP, Purschke ML, Purwar AK, Qualls J, Rak J, Ravinovich I, Read KF, Reuter M, Reygers K, Riabov V, Riabov Y, Roche G, Romana A, Rosati M, Rosendahl S, Rosnet P, Rykov VL, Ryu SS, Saito N, Sakaguchi T, Sakai S, Samsonov V, Sanfratello L, Santo R, Sato HD, Sato S, Sawada S, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shimomura M, Sickles A, Silva CL, Silvermyr D, Sim KS, Soldatov A, Soltz RA, Sondheim WE, Sorensen S, Sourikova IV, Staley F, Stankus PW, Stenlund E, Stepanov M, Ster A, Stoll SP, Sugitate T, Sullivan JP, Takagi S, Takagui EM, Taketani A, Tanaka KH, Tanaka Y, Tanida K, Tannenbaum MJ, Taranenko A, Tarján P, Thomas TL, Togawa M, Tojo J, Torii H, Towell RS, Tram VN, Tserruya I, Tsuchimoto Y, Tydesjö H, Tyurin N, Uam TJ, van Hecke HW, Velkovska J, Velkovsky M, Veszprémi V, Vinogradov AA, Volkov MA, Vznuzdaev E, Wang XR, Watanabe Y, White SN, Willis N, Wohn FK, Woody CL, Xie W, Yanovich A, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zaudtke O, Zhang C, Zhou S, Zimányi J, Zolin L, Zong X. Double helicity asymmetry in inclusive midrapidity pi0 production for polarized p+p collisions at square root s = 200 GeV. PHYSICAL REVIEW LETTERS 2004; 93:202002. [PMID: 15600917 DOI: 10.1103/physrevlett.93.202002] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2004] [Indexed: 05/24/2023]
Abstract
We present a measurement of the double longitudinal spin asymmetry in inclusive pi(0) production in polarized proton-proton collisions at sqrt[s]=200 GeV. The data were taken at the Relativistic Heavy Ion Collider with average beam polarizations of 0.27. The measurements are the first in a program to study the longitudinal spin structure of the proton, using strongly interacting probes, at collider energies. The asymmetry is presented for transverse momenta 1-5 GeV/c at midrapidity, where next-to-leading-order perturbative quantum chromodynamic (NLO pQCD) calculations well describe the unpolarized cross section. The observed asymmetry is small and is compared to a NLO pQCD calculation with a range of polarized gluon distributions.
Collapse
|
79
|
Takehira K, Shishido T, Song Z, Matsushita T, Kawabata T, Takaki K. Crystalline CrV0.95P0.05O4 catalyst for the vapor-phase oxidation of picolines. Catal Today 2004. [DOI: 10.1016/j.cattod.2004.03.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
80
|
Finco-Kent D, Morrone A, Moxness M, Bedian V, Krasner A, Foley J, Stene M, Kawabata T. Development and Validation of a Radioligand Binding Assay to Measure Insulin Specific IgG Subclass Antibodies in Human Serum. Ann N Y Acad Sci 2003; 1005:259-64. [PMID: 14679072 DOI: 10.1196/annals.1288.039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The objective was to develop and validate a radioligand binding assay for insulin antibodies (IABs) of the IgG1, IgG2, IgG3, and IgG4 subclasses in human serum. The validation studies focused on determining specificity, capacity, linearity, sensitivity, and precision of each assay. It was seen that our assay for IAB IgG subclasses is specific and has sufficient capacity to measure each of the subclasses in human serum. Moreover, the linear region and limits of detection and quantitation for each assay are clearly determined.
Collapse
|
81
|
Adler SS, Afanasiev S, Aidala C, Ajitanand NN, Akiba Y, Al-Jamel A, Alexander J, Aoki K, Aphecetche L, Armendariz R, Aronson SH, Averbeck R, Awes TC, Babintsev V, Baldisseri A, Barish KN, Barnes PD, Bassalleck B, Bathe S, Batsouli S, Baublis V, Bauer F, Bazilevsky A, Belikov S, Bjorndal MT, Boissevain JG, Borel H, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy JM, Butsyk S, Camard X, Chand P, Chang WC, Chernichenko S, Chi CY, Chiba J, Chiu M, Choi IJ, Choudhury RK, Chujo T, Cianciolo V, Cobigo Y, Cole BA, Comets MP, Constantin P, Csanád M, Csörgo T, Cussonneau JP, d'Enterria D, Das K, David G, Deák F, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Devismes A, Dietzsch O, Drachenberg JL, Drapier O, Drees A, Durum A, Dutta D, Dzhordzhadze V, Efremenko YV, En'yo H, Espagnon B, Esumi S, Fields DE, Finck C, Fleuret F, Fokin SL, Fox BD, Fraenkel Z, Frantz JE, Franz A, Frawley AD, Fukao Y, Fung SY, Gadrat S, Germain M, Glenn A, Gonin M, Gosset J, Goto Y, Granier de Cassagnac R, Grau N, Greene SV, Grosse Perdekamp M, Gustafsson HA, Hachiya T, Haggerty JS, Hamagaki H, Hansen AG, Hartouni EP, Harvey M, Hasuko K, Hayano R, He X, Heffner M, Hemmick TK, Heuser JM, Hidas P, Hiejima H, Hill JC, Hobbs R, Holzmann W, Homma K, Hong B, Hoover A, Horaguchi T, Ichihara T, Ikonnikov VV, Imai K, Inuzuka M, Isenhower D, Isenhower L, Issah M, Isupov A, Jacak BV, Jia J, Jinnouchi O, Johnson BM, Johnson SC, Joo KS, Jouan D, Kajihara F, Kametani S, Kamihara N, Kaneta M, Kang JH, Katou K, Kawabata T, Kazantsev A, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim E, Kim GB, Kim HJ, Kinney E, Kiss A, Kistenev E, Kiyomichi A, Klein-Boesing C, Kobayashi H, Kochetkov V, Kohara R, Komkov B, Konno M, Kotchetkov D, Kozlov A, Kroon PJ, Kuberg CH, Kunde GJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Le Bornec Y, Lebedev A, Leckey S, Lee DM, Leitch MJ, Leite MAL, Li X, Li XH, Lim H, Litvinenko A, Liu MX, Maguire CF, Makdisi YI, Malakhov A, Manko VI, Mao Y, Martinez G, Masui H, Matathias F, Matsumoto T, McCain MC, McGaughey PL, Miake Y, Miller TE, Milov A, Mioduszewski S, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mukhopadhyay D, Muniruzzaman M, Nagamiya S, Nagle JL, Nakamura T, Newby J, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Okada H, Okada K, Oskarsson A, Otterlund I, Oyama K, Ozawa K, Pal D, Palounek APT, Pantuev V, Papavassiliou V, Park J, Park WJ, Pate SF, Pei H, Penev V, Peng JC, Pereira H, Peresedov V, Pierson A, Pinkenburg C, Pisani RP, Purschke ML, Purwar AK, Qualls J, Rak J, Ravinovich I, Read KF, Reuter M, Reygers K, Riabov V, Riabov Y, Roche G, Romana A, Rosati M, Rosendahl S, Rosnet P, Rykov VL, Ryu SS, Saito N, Sakaguchi T, Sakai S, Samsonov V, Sanfratello L, Santo R, Sato HD, Sato S, Sawada S, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shimomura M, Sickles A, Silva CL, Silvermyr D, Sim KS, Soldatov A, Soltz RA, Sondheim WE, Sorensen S, Sourikova IV, Staley F, Stankus PW, Stenlund E, Stepanov M, Ster A, Stoll SP, Sugitate T, Sullivan JP, Takagi S, Takagui EM, Taketani A, Tanaka KH, Tanaka Y, Tanida K, Tannenbaum MJ, Taranenko A, Tarján P, Thomas TL, Togawa M, Tojo J, Torii H, Towell RS, Tram VN, Tserruya I, Tsuchimoto Y, Tydesjö H, Tyurin N, Uam TJ, van Hecke HW, Velkovska J, Velkovsky M, Veszprémi V, Vinogradov AA, Volkov MA, Vznuzdaev E, Wang XR, Watanabe Y, White SN, Willis N, Wohn FK, Woody CL, Xie W, Yanovich A, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang C, Zhou S, Zimányi J, Zolin L, Zong X. Absence of suppression in particle production at large transverse momentum in sqrt[s(NN)]=200 GeV d+Au collisions. PHYSICAL REVIEW LETTERS 2003; 91:072303. [PMID: 12935008 DOI: 10.1103/physrevlett.91.072303] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2003] [Indexed: 05/24/2023]
Abstract
Transverse momentum spectra of charged hadrons with p(T)<8 GeV/c and neutral pions with p(T)<10 GeV/c have been measured at midrapidity by the PHENIX experiment at BNL RHIC in d+Au collisions at sqrt[s(NN)]=200 GeV. The measured yields are compared to those in p+p collisions at the same sqrt[s(NN)] scaled up by the number of underlying nucleon-nucleon collisions in d+Au. The yield ratio does not show the suppression observed in central Au+Au collisions at RHIC. Instead, there is a small enhancement in the yield of high momentum particles.
Collapse
|
82
|
Zegers RGT, Abend H, Akimune H, van den Berg AM, Fujimura H, Fujita H, Fujita Y, Fujiwara M, Galès S, Hara K, Harakeh MN, Ishikawa T, Kawabata T, Kawase K, Mibe T, Nakanishi K, Nakayama S, Toyokawa H, Uchida M, Yamagata T, Yamasaki K, Yosoi M. Excitation and decay of the isovector giant monopole resonances via the 208Pb(3He,t p) reaction at 410 MeV. PHYSICAL REVIEW LETTERS 2003; 90:202501. [PMID: 12785887 DOI: 10.1103/physrevlett.90.202501] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2002] [Indexed: 05/24/2023]
Abstract
The excitation and subsequent proton decay of the isovector spin-flip giant monopole resonance (IVSGMR) is studied via the 208Pb(3He,t) reaction at 410 MeV. In the inclusive spectrum (60+/-5)% of the non-energy-weighted sum-rule strength for this 2 variant Planck's over 2h omega resonance was found in the region 29<Ex(208Bi)<51 MeV. The central excitation energy and width of the IVSGMR are 37+/-1 MeV and 14+/-3 MeV, respectively. It is found that the branching ratio for proton decay is (52+/-12)% and that the deep neutron-hole states in 207Pb are strongly fed.
Collapse
|
83
|
Fujishima H, Nishimura A, Wachi M, Takagi H, Hirasawa T, Teraoka H, Nishimori K, Kawabata T, Nishikawa K, Nagai K. kdsA mutations affect FtsZ-ring formation in Escherichia coli K-12. MICROBIOLOGY (READING, ENGLAND) 2002; 148:103-12. [PMID: 11782503 DOI: 10.1099/00221287-148-1-103] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
No one has, as yet, addressed the relationship between the nature of the outer membrane and cell division. kdsA encodes 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthetase which catalyses the first step in the synthesis of KDO, the linker between lipid A and oligosaccharide of lipopolysaccharide (LPS). Seven temperature-sensitive mutants containing missense mutations in kdsA were affected in the production of KDO and all mutants stopped dividing at 41 degrees C and formed filaments with either one or no FtsZ ring. All observed defects were reversed by the plasmid-borne wild-type kdsA gene. Western blotting analysis, however, demonstrated that the amount of FtsZ protein was not affected by the mutation. The mutants were more susceptible to various hydrophobic materials, such as novobiocin, eosin Y and SDS at 36 degrees C. Methylene blue, however, restored kdsA mutant growth. Plasmid-borne wild-type msbA, encoding a lipid A transporter in the ABC family, partially suppressed kdsA mutation. A mutation of lpxA, functioning at the first stage in lipid A biosynthesis, inhibited both cell division and growth, producing short filaments. These results indicate that the instability of the outer membrane, caused by the defect in KDO biosynthesis, affects FtsZ-ring formation.
Collapse
|
84
|
Kawabata T, Ichikura T, Majima T, Seki S, Chochi K, Takayama E, Hiraide H, Mochizuki H. Preoperative serum interleukin-18 level as a postoperative prognostic marker in patients with gastric carcinoma. Cancer 2001. [PMID: 11596019 DOI: 10.1002/1097-0142(20011015)92:8<2050::aid-cncr1544>3.0.co;2-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
BACKGROUND Interleukin-18 (IL-18), a recently described cytokine produced mainly by macrophages, stimulates interferon-gamma (IFN-gamma) production by natural killer cells and T cells. Although it has been reported that serum IL-18 levels are higher in patients with advanced tuberculosis and acute graft-versus-host disease compared with normal controls, the authors found no reports regarding serum IL-18 levels in patients with malignant solid tumors. The purpose of this study was to determine serum IL-18 levels and their clinical significance in patients with gastric carcinoma. METHODS Peripheral blood samples were obtained from 94 patients with gastric carcinoma who underwent curative surgery and from 50 healthy volunteers. The serum IL-18 level, the IFN-gamma, level, and the Helicobacter pylori (HP) serology status were determined in each sample with an enzyme-linked immunosorbent assay. RESULTS The mean serum IL-18 level for all patients was significantly higher compared with the mean level in healthy volunteers (P < 0.01). IFN-gamma titers were below the level of detection in all samples tested. When the patients were subdivided into groups, it was found that the serum IL-18 level in patients with Stage II and III disease was significantly higher compared with the level found in healthy volunteers (P < 0.01). The serum IL-18 level decreased after patients underwent surgical resection. However, there was no significant difference in the serum IL-18 level between healthy controls and patients with Stage I or IV disease. Patients with IL-18 levels >or= 310 pg/mL (i.e., equal to or greater than the mean levels +/- 1 standard deviation in the healthy volunteers) experienced a significantly lower survival rate compared with patients who had IL-18 levels < 310 pg/mL after undergoing surgery (P < 0.05) despite a lack of any discernible difference in clinicopathologic factors between the two groups. The serum IL-18 level was identified as an independent postoperative prognostic factor in multivariate survival analysis using a Cox proportional hazards model (hazard ratio, 4.89; P = 0.01). There was no significant correlation between HP serology status and serum IL-18 levels. CONCLUSIONS The preoperative serum IL-18 level may represent a significant postoperative prognostic determinant in patients with gastric carcinoma. Its function in the host immune system remains to be elucidated.
Collapse
|
85
|
Kawabata T, Nishikawa K. [GTOP: database for protein 3D structure prediction]. TANPAKUSHITSU KAKUSAN KOSO. PROTEIN, NUCLEIC ACID, ENZYME 2001; 46:2592-7. [PMID: 11802435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/23/2023]
|
86
|
Leksanov A, Alster J, Asryan G, Averichev Y, Barton D, Baturin V, Bukhtoyarova N, Carroll A, Heppelmann S, Kawabata T, Makdisi Y, Malki A, Minina E, Navon I, Nicholson H, Ogawa A, Panebratsev Y, Piasetzky E, Schetkovsky A, Shimanskiy S, Tang A, Watson JW, Yoshida H, Zhalov D. Energy dependence of nuclear transparency in C (p,2p) scattering. PHYSICAL REVIEW LETTERS 2001; 87:212301. [PMID: 11736334 DOI: 10.1103/physrevlett.87.212301] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2001] [Indexed: 05/23/2023]
Abstract
The transparency of carbon for (p,2p) quasielastic events was measured at beam momenta ranging from 5.9 to 14.5 GeV/c at 90 degrees c.m. The four-momentum transfer squared (Q2) ranged from 4.7 to 12.7 (GeV/c)(2). We present the observed beam momentum dependence of the ratio of the carbon to hydrogen cross sections. We also apply a model for the nuclear momentum distribution of carbon to obtain the nuclear transparency. We find a sharp rise in transparency as the beam momentum is increased to 9 GeV/c and a reduction to approximately the Glauber level at higher energies.
Collapse
|
87
|
Ando S, Tadenuma T, Tanaka Y, Fukui F, Kobayashi S, Ohashi Y, Kawabata T. Enhancement of learning capacity and cholinergic synaptic function by carnitine in aging rats. J Neurosci Res 2001; 66:266-71. [PMID: 11592123 DOI: 10.1002/jnr.1220] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The effects of a carnitine derivative, acetyl-L-carnitine (ALCAR), on the cognitive and cholinergic activities of aging rats were examined. Rats were given ALCAR (100 mg/kg) per os for 3 months and were subjected to the Hebb-Williams tasks and a new maze task, AKON-1, to assess their learning capacity. The learning capacity of the ALCAR-treated group was superior to that of the control. Cholinergic activities were determined with synaptosomes isolated from the cortices. The high-affinity choline uptake by synaptosomes, acetylcholine synthesis in synaptosomes, and acetylcholine release from synaptosomes on membrane depolarization were all enhanced in the ALCAR group. This study indicates that chronic administration of ALCAR increases cholinergic synaptic transmission and consequently enhances learning capacity as a cognitive function in aging rats.
Collapse
|
88
|
Kawabata T, Ichikura T, Majima T, Seki S, Chochi K, Takayama E, Hiraide H, Mochizuki H. Preoperative serum interleukin-18 level as a postoperative prognostic marker in patients with gastric carcinoma. Cancer 2001; 92:2050-5. [PMID: 11596019 DOI: 10.1002/1097-0142(20011015)92:8<2050::aid-cncr1544>3.0.co;2-5] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
BACKGROUND Interleukin-18 (IL-18), a recently described cytokine produced mainly by macrophages, stimulates interferon-gamma (IFN-gamma) production by natural killer cells and T cells. Although it has been reported that serum IL-18 levels are higher in patients with advanced tuberculosis and acute graft-versus-host disease compared with normal controls, the authors found no reports regarding serum IL-18 levels in patients with malignant solid tumors. The purpose of this study was to determine serum IL-18 levels and their clinical significance in patients with gastric carcinoma. METHODS Peripheral blood samples were obtained from 94 patients with gastric carcinoma who underwent curative surgery and from 50 healthy volunteers. The serum IL-18 level, the IFN-gamma, level, and the Helicobacter pylori (HP) serology status were determined in each sample with an enzyme-linked immunosorbent assay. RESULTS The mean serum IL-18 level for all patients was significantly higher compared with the mean level in healthy volunteers (P < 0.01). IFN-gamma titers were below the level of detection in all samples tested. When the patients were subdivided into groups, it was found that the serum IL-18 level in patients with Stage II and III disease was significantly higher compared with the level found in healthy volunteers (P < 0.01). The serum IL-18 level decreased after patients underwent surgical resection. However, there was no significant difference in the serum IL-18 level between healthy controls and patients with Stage I or IV disease. Patients with IL-18 levels >or= 310 pg/mL (i.e., equal to or greater than the mean levels +/- 1 standard deviation in the healthy volunteers) experienced a significantly lower survival rate compared with patients who had IL-18 levels < 310 pg/mL after undergoing surgery (P < 0.05) despite a lack of any discernible difference in clinicopathologic factors between the two groups. The serum IL-18 level was identified as an independent postoperative prognostic factor in multivariate survival analysis using a Cox proportional hazards model (hazard ratio, 4.89; P = 0.01). There was no significant correlation between HP serology status and serum IL-18 levels. CONCLUSIONS The preoperative serum IL-18 level may represent a significant postoperative prognostic determinant in patients with gastric carcinoma. Its function in the host immune system remains to be elucidated.
Collapse
|
89
|
Ito T, Takamata A, Yaegashi K, Itoh T, Yoshida T, Kawabata T, Kimura M, Morimoto T. Role of blood volume in the age-associated decline in peak oxygen uptake in humans. THE JAPANESE JOURNAL OF PHYSIOLOGY 2001; 51:607-12. [PMID: 11734082 DOI: 10.2170/jjphysiol.51.607] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
It has been reported that maximal oxygen uptake (VO(2 max)) is linearly correlated with blood volume (BV) in young people and that there is a reduction in VO(2 max) with aging. To examine the involvement of BV in the reduction of VO(2 max), we used an incremental cycle ergometer protocol in a semi-recumbent position to determine the relationship between peak oxygen uptake (VO(2 peak)) and BV in older subjects (69.1 +/- 1.0 years; n = 22), then compared that relationship with that in young subjects (22.3 +/- 0.5 years; n = 31). In the present study, VO(2 peak) and BV were significantly lower in the older subjects, compared with those in the young subjects. A linear correlation was demonstrated between the VO(2 peak) and BV in both the older (r = 0.705; p < 0.001) and the young (r = 0.681; p < 0.001) subjects within the groups. However, an analysis of covariance with BV as a covariate revealed that VO(2 peak) at a given BV was smaller in the older subjects than in the young subjects (p < 0.001), i.e., graphically, the regression line determined for the older subjects showed a downward shift. The decreased peak heart rate as a result of aging (153 +/- 3 beats/min in the older vs. 189 +/- 2 beats/min in the young subjects) contributed partly to this downward shift. These results suggest that the BV is an important determinant factor for VO(2 peak), especially within an age group, and that the age-associated decline of VO(2 peak) is also, to a relatively larger degree, because of factors other than BV and heart rate.
Collapse
|
90
|
Uchida H, Fukuda T, Miyamoto H, Kawabata T, Suzuki M, Uwajima T. Polymerization of bisphenol A by purified laccase from Trametes villosa. Biochem Biophys Res Commun 2001; 287:355-8. [PMID: 11554734 DOI: 10.1006/bbrc.2001.5593] [Citation(s) in RCA: 102] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The metabolism of bisphenol A (BPA), an endocrine-disrupting chemical, was studied with a highly purified laccase from the basidiomycete Trametes villosa. The enzyme reaction products ranged widely from water-insoluble to -soluble compounds, one of which was previously identified as 4-isopropenylphenol. (1)H NMR and electron-impact mass spectrum analyses showed that one of the insoluble products was a BPA dimer, 5,5'-bis-[1-(4-hydroxy-phenyl)-1-methyl-ethyl]-biphenyl-2,2'-diol. Field-desorption mass spectrum analysis revealed BPA oligomers, some of which contained phenol, within the insoluble fraction. These results indicate that the laccase reaction may contain successive BPA polymerization, followed by either the addition of phenol to the formed oligomers or their decomposition to release 4-isopropenylphenol.
Collapse
|
91
|
Kobayashi M, Sasaki S, Kawabata T, Hasegawa K, Akabane M, Tsugane S. Single measurement of serum phospholipid fatty acid as a biomarker of specific fatty acid intake in middle-aged Japanese men. Eur J Clin Nutr 2001; 55:643-50. [PMID: 11477462 DOI: 10.1038/sj.ejcn.1601194] [Citation(s) in RCA: 87] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2000] [Revised: 01/16/2001] [Accepted: 01/17/2001] [Indexed: 11/09/2022]
Abstract
OBJECTIVE To assess the utility of serum phospholipid fatty acid (FA) levels as a biochemical indicator of habitual dietary fatty acid intake in Japanese, whose diet is characterized by low fat intake and high intake of n-3 polyunsaturated fatty acids (PUFA) of marine origin. SUBJECTS AND METHODS Eighty-seven male volunteers from four public health center districts that were part of the Japan Public Health Center based Prospective Study (JPHC Study) cohort I, were included in this study. Habitual intake of fatty acid was obtained by 7 day weighed dietary records four times (in one area only twice) in 1994--1995. Blood was collected twice, in February and August of the same year, and the composition of FA in serum phospholipid was analyzed by gas chromatography. The correlation coefficient between serum phospholipid FA levels and fatty acid intake was calculated. RESULTS High correlations were observed for eicosapentaenoic acid (EPA), docosapentaenoic acid (DPA) and docosahexaenoic acid (DHA), which are marine origin n-3 PUFA (r=0.75, 0.49, 0.50, respectively). No significant correlation was observed for saturated fatty acid (SFA), although the monounsaturated fatty acid (MUFA), palmitoleic acid and oleic acid intake were moderately correlated (r=0.22, 0.35, respectively). The correlations for EPA, DPA and DHA were similar in both samples collected in February and August. CONCLUSIONS These data suggest that in populations with a high and stable over time intake of n-3 PUFA of marine origin, a single measurement of serum phospholipids reflects the ranking of habitual intake of marine origin n-3 PUFA.
Collapse
|
92
|
Okazaki K, Amano T, Morimoto T, Iemoto T, Kawabata T, Hayakawa S, Akimitsu K. Cloning and nucleotide sequence of the mycodextranase gene from Streptomyces sp. J-13-3. Biosci Biotechnol Biochem 2001; 65:1684-7. [PMID: 11515560 DOI: 10.1271/bbb.65.1684] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Mycodextranase (EC 3.2.1.61) is an alpha-glucanase that cleaves alpha-1,4-bonds of alternating alpha-1,3- and alpha-1,4-linked D-glucan (nigeran). The gene encoding mycodextranase from Streptomyces sp. J-13-3 was cloned by hybridization with a degenerate oligonucleotide probe from the amino-terminal amino acid sequence of the enzyme and its nucleotide structure was analyzed. The open reading frame consisted of 1,803 base pairs encoding a signal peptide of 60 amino acids and a mature protein of 540 amino acids with a calculated molecular weight of 56,078. The deduced amino acid sequence showed weak similality to a chitinase homolog from Streptomyces lividans and a chitinase from Xanthomonas sp.
Collapse
|
93
|
Fukuda T, Uchida H, Takashima Y, Uwajima T, Kawabata T, Suzuki M. Degradation of bisphenol A by purified laccase from Trametes villosa. Biochem Biophys Res Commun 2001; 284:704-6. [PMID: 11396959 DOI: 10.1006/bbrc.2001.5021] [Citation(s) in RCA: 94] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Degradation of bisphenol A (BPA), an endocrine-disrupting chemical, was studied with a purified laccase from the basidiomycete Trametes villosa. SDS--polyacrylamide gel electrophoresis of the purified laccase gave one single band with a mobility corresponding to MW 65 kDa. The absorption spectrum showed the characteristics of a blue copper protein with a maximum peak at 600 nm. HPLC analysis revealed that 2.2 micromol BPA were degraded by incubation with 1.5 units of the purified laccase in a total volume of 1.0 ml at pH 6.0 and 60 degrees C for 3 h. The enzyme reaction proceeded rapidly without requirement of mediators for the electron transfer. Isolation and identification of several reaction products are in progress, in which one product was identified as 4-isopropenylphenol by a gas chromatography--mass spectrophotometer.
Collapse
|
94
|
Sakumoto N, Inafuku S, Shimoji H, Nomura K, Honma K, Kawabata T, Ohta M, Kuniyoshi M, Ishikawa K, Genka K. Videothoracoscopic surgery for thoracic neurogenic tumors: a 7-year experience. Surg Today 2001; 30:974-7. [PMID: 11110390 DOI: 10.1007/s005950070016] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
While videothoracoscopic surgery has rapidly become accepted as an effective method of performing minimally invasive surgery, the advantages and feasibility of using this surgical technique for the treatment of neurogenic tumors of the thorax are not yet well defined. Between August 1992 and May 1999, 15 solitary thoracic neurogenic tumors were surgically excised using videothoracoscopic surgery in our hospital. The patients comprised six women and nine men, with a mean age of 38.1 years. The mean tumor size was 3.5 cm, with a range of 1.5-6.5 cm and included 12 schwannomas, 2 ganglioneuromas, and 1 neurofibroma. Among the 15 patients, 4 were treated using videothoracoscopic surgery plus minithoracotomy. The only complication associated with videothoracoscopic surgery was hoarseness which developed in one patient. Our experience indicates that videothoracoscopic surgery is a useful alternative to facilitate the excision of small thoracic neurogenic tumors.
Collapse
|
95
|
Satoh H, Uesugi Y, Kawabata T, Mori K, Fujii F, Kashimoto Y, Kajimura T, Furuhama K. Morphological classification of dental lesions induced by various antitumor drugs in mice. Toxicol Pathol 2001; 29:292-9. [PMID: 11442015 DOI: 10.1080/019262301316905246] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
Abstract
To characterize and compare maxillary incisor lesions caused by various antitumor drugs, male BALB/c mice were given a single intravenous injection of an estimated 10% lethal dose (LD10)) of 5-fluorouracil (5-FU), adriamycin (ADR), mitomycin C (MMC), vinblastine sulfate (VBL). taxotere (TXR), irinotecan hydrochloride (CPT-11), DX-8951f, or cisplatin (CDDP). After 3, 5, 10, 15, and 60 days, the animals were sacrificed, and the maxillary incisors were examined microscopically. The dental lesions observed were classified into 4 different types on the basis of their morphological features. The lesion due to 5-FU was characterized by focal defects in the dentin, and this injury was reversible (transient dentin injury). ADR- or MMC-induced lesions were defined by abnormal structure of the apical aspect of the tooth and irregular odontogenesis, lasting for a long period (persistent apical injury). Treatment with VBL or TXR showed irregular enamel formation and abnormal dentinogenesis. Their targets were considered to be both immature and mature odontogenic cells (diffuse dental injury). Exposure to CPT-11, DX-8951f, or CDDP elicited minor reductions in a few precursor cells in the epithelial sheath on day 3, but no prominent dental abnormalities were seen thereafter (nontoxic injury). In conclusion, antitumor drugs can cause a variety of dental lesions that vary temporally and spatially, making histopathological examination of the maxillary incisor an important component of the safety assessment process for novel antitumor drugs.
Collapse
|
96
|
Kakehashi C, Mori M, Kawabata T, Okada S. In vitro transformation of rat renal cells by treatment with ferric nitrilotriacetate. ACTA MEDICA OKAYAMA 2001; 55:97-103. [PMID: 11332205 DOI: 10.18926/amo/32004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Administration of ferric nitrilotriacetate (Fe-NTA) in vivo causes acute renal tubular injury and finally induces renal cell carcinoma. There is accumulating evidence that these processes involve free radicals generated by Fe-NTA. To study the mechanism of renal carcinogenesis by Fe-NTA, we attempted to induce malignant transformation of primary cultured renal cells by treatment with Fe-NTA. When primary cultured renal cells (PRC) were treated continuously with Fe-NTA, all of the PRC died without transformation. On the other hand, when PRC were treated intermittently with Fe-NTA, transformed epithelial colonies were observed at 3 weeks after the first treatment. The established transformed cell line (RK523) showed drastic morphological transformation, grew in soft agar, and formed tumors when transplanted into athymic nude mice. These results indicate that the balance between cytotoxicity and mutagenecity is important for Fe-NTA induced transformation. The RK523 cell line may be a useful model for studying renal carcinogenesis in vitro.
Collapse
|
97
|
Pu H, Sakaguchi M, Kondo T, Kondo A, Kawabata T, Namba M. Effects of oxygen concentrations on human fibroblasts treated with Fe(3+)-NTA. Int J Mol Med 2001; 7:295-300. [PMID: 11179510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023] Open
Abstract
Free radicals derived from the reaction of iron and oxygen are thought to be one of the causes of tissue injury. In order to identify whether oxygen concentrations are an important factor in iron-mediated damage to cells, cytotoxic effects of Fe(3+)-NTA on human fibroblasts (KMST-6 line) were studied under the conditions of 1% and 20% oxygen concentrations in an incubator. A comparison of the effects of Fe(3+)-NTA on cells cultured in 1% and 20% oxygen environments showed that the following features were more prominent under the usual culture concentrations of 20% oxygen: i) cytotoxicity, ii) increase in intracellular reactive oxygen species, iii) increase in H(2)O(2) production in the cells, and iv) formation of 8-hydroxydeoxyguanosine. To elucidate the roles of endogenous antioxidants, the levels of manganese superoxide dismutase (MnSOD) and catalase were measured by Western blotting. The increase in MnSOD in the presence of Fe(3+)-NTA was greater under the condition of 20% O(2) than under the condition of 1% O(2). The expression of catalase was significantly up-regulated at 20% O(2). However, when the cells were treated with Fe(3+)-NTA, the expression of catalase was markedly down-regulated under the condition of 20% O(2). Hydroxyl radical scavengers such as vitamin E, dimethyl-sulfoxide (DMSO) and mannitol reduced endogenous ROS generation and alleviated the cytotoxic effects of iron. On the other hand, superoxide dismutase (SOD), vitamin C and catalase did not show any protective effects against Fe(3+)-NTA. These findings suggest that enhanced cytotoxic effects of Fe(3+)-NTA at 20% O(2 )are due to endogenously produced hydroxyl radicals.
Collapse
|
98
|
Pu H, Sakaguchi M, Kondo T, Kondo A, Kawabata T, Namba M. Effects of oxygen concentrations on human fibroblasts treated with Fe3+-NTA. Int J Mol Med 2001. [DOI: 10.3892/ijmm.7.3.295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
|
99
|
Sakumoto N, Inafuku S, Shimoji H, Nomura K, Honma K, Kawabata T, Ohta M, Kuniyoshi M, Ishikawa K, Genka K. Endobronchial metastasis from renal cell carcinoma: report of a case. Surg Today 2001; 30:744-6. [PMID: 10955741 DOI: 10.1007/s005950070089] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
A case of endobronchial metastasis from renal cell carcinoma developing 5 years after a right nephrectomy in a 63-year-old man is reported. Bronchoscopic examination performed after the patient presented with hemoptysis showed a polypoid tumor obstructing the entrance to the left upper bronchus. A snare was introduced through a bronchofiberscope to remove the endobronchial tumor, following which his atelectasis improved remarkably and his hemoptysis resolved. No side effects were observed. Electrosurgical snaring proved useful as palliative treatment to relieve bronchial obstruction due to an endobronchial metastasis in this patient.
Collapse
|
100
|
Kawabata T, Arisaka F, Nishikawa K. Structural/functional assignment of unknown bacteriophage T4 proteins by iterative database searches. Gene 2000; 259:223-33. [PMID: 11163980 DOI: 10.1016/s0378-1119(00)00442-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Among the total of 274 orfs within bacteriophage T4, only half have been reasonably well characterized, and the functions of the rest have remained obscure. In order to predict the molecular functions of the orfs, a position-specific iterated (PSI)-BLAST search of bacteriophage T4 against the sequence database of known 3D structures was carried out. PSI-BLAST is one of the most powerful iterative sequence search methods using multiple sequence alignment, with the ability to detect many more proteins with distant homology than standard pairwise methods. The 3D structures of proteins are considered to be better preserved than the sequences, and the detected distantly homologous proteins are likely to possess highly similar 3D structures. Thirteen orfs of phage T4, whose homologues were not detected by standard pairwise methods, were found to have significantly homologous counterparts by this method. The plausibility of the results was confirmed by checking whether important residues at substrate/ligand-binding sites were conserved. Among them, two orfs, vs.1 and e.1, which are similar to Escherichia coli lytic enzyme and MutT protein, respectively, had not been studied previously. Also, gp rIIA, a rapid lysis protein, whose gene structure had been intensively studied during the development of molecular biology in the 1950s and yet whose molecular function remains unknown, has an N-terminal domain that is significantly similar to the N-terminal region of the heat shock protein Hsp90.
Collapse
|