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Bender BC, Schaedeli Stark F, Joshi A, Chu Y, Rugo HS, Krop IE, Girish S, Gupta M. A semi-physiologic population pharmacokinetic/pharmacodynamic (PK/PD) model of thrombocytopenia (TCP) characterizing the effect of trastuzumab-DM1 (T-DM1) on platelet counts in patients with HER2-positive MBC. J Clin Oncol 2011. [DOI: 10.1200/jco.2011.29.15_suppl.605] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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77
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Wang LI, Casso D, Oliveria SA, Wells K, Hensley Alford S, Bortolini M, Chu Y, Dong W, Ulcickas Yood M. Liver injury in chemotherapy (CT)-treated breast, colorectal, and lung cancer (CA) patients (Pts) using automated health data. J Clin Oncol 2011. [DOI: 10.1200/jco.2011.29.15_suppl.e13566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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78
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Elewaut D, Matmati M, Jacques P, Maelfait J, Verheugen E, Kool M, Sze M, Geboes L, Louagie E, Mc Guire C, Vereecke L, Chu Y, Staelens S, Matthys P, Lambrecht B, Schmidt-Supprian M, Pasparakis M, Beyaert R, van Loo G. A20 (TNFAIP3) deficiency in myeloid cells triggers rheumatoid arthritis. Ann Rheum Dis 2011. [DOI: 10.1136/ard.2010.148973.10] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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79
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Cao H, Chu Y, Zhu H, Sun J, Pu Y, Gao Z, Yang C, Peng S, Dou Z, Hua J. Characterization of immortalized mesenchymal stem cells derived from foetal porcine pancreas. Cell Prolif 2011; 44:19-32. [PMID: 21199007 DOI: 10.1111/j.1365-2184.2010.00714.x] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Islet replacement therapy is limited by shortage of donor islet cells. Usage of islet cells derived from porcine pancreatic stem cells (PSCs) is currently viewed as the most promising alternative for human islet transplantation. However, PSCs are rare and have a finite proliferative lifespan. In this study, we isolated and established an immortalized mesenchymal stem cell (MSC) line derived from foetal porcine pancreas, by transfecting human telomerase reverse transcriptase (hTERT) and called these immortalized pancreatic mesenchymal stem cells (iPMSCs). The iPMSCs have been cultured for more than 80 passages and have capacity to differentiate into neurons, cardiomyocytes, germ cells and islet-like cells, analysed by morphology, RT-PCR, western blotting, immunofluorescence, immunocytochemistry and transplantation assay. Islets derived from iPMSCs reversed hyperglycaemia in streptozotocin-induced diabetic mice and secreted insulin and C-peptide in vitro. These results demonstrated that iPMSCs might provide unlimited resources for islet replacement therapy and models for functional cell differentiation.
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Togan E, Chu Y, Trifonov AS, Jiang L, Maze J, Childress L, Dutt MVG, Sørensen AS, Hemmer PR, Zibrov AS, Lukin MD. Quantum entanglement between an optical photon and a solid-state spin qubit. Nature 2010; 466:730-4. [DOI: 10.1038/nature09256] [Citation(s) in RCA: 853] [Impact Index Per Article: 60.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2010] [Accepted: 06/08/2010] [Indexed: 11/09/2022]
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81
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LoRusso P, Krop IE, Burris HA, Vukelja SJ, Miller K, Zheng M, Chu Y, Lu M, Amler LC, Rugo HS. Quantitative assessment of diagnostic markers and correlations with efficacy in two phase II studies of trastuzumab-DM1 (T-DM1) for patients (pts) with metastatic breast cancer (MBC) who had progressed on prior HER2-directed therapy. J Clin Oncol 2010. [DOI: 10.1200/jco.2010.28.15_suppl.1016] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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82
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Huang Z, Chu Y, Cunha B, Hahn J. Generalisation of a procedure for computing transcription factor profiles. IET Syst Biol 2010; 4:108-18. [PMID: 20232991 DOI: 10.1049/iet-syb.2008.0140] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The limited amount of quantitative experimental data generated from life-science experiments poses a major challenge in systems biology. The reason for this is that many systems approaches, such as parameter estimation, simulation and sensitivity analysis make use of models or analyse quantitative data. However, these techniques are only of limited use if only qualitative or semi-quantitative information is available about a system. Therefore procedures that generate quantitative data from experiments in the life sciences can greatly expand the use of systems approaches to biological problems. This study addresses this issue as it introduces a procedure that computes quantitative transcription factor profiles from fluorescent microscopy data collected from green fluorescent protein (GFP) reporter cells. This technique forms a generalisation of a method that has recently been introduced for monitoring NF-B profiles. The contribution made in this work is that the assumption that the transcription factor profile exhibits damped oscillations is relaxed, as transcription factors, other than the previously investigated NF-B, may exhibit different profiles. This is achieved by investigating a variety of potential profiles and solving the inverse problem for the model describing transcription, translation and activation of GFP for each one. The transcription factor profile that results in the best fit among the potential candidates, for the measured fluorescent intensity data, is then chosen as the most likely concentration profile. The technique is illustrated in two detailed case studies, where one case study involves simulation data whereas the other one uses experimentally derived fluorescent intensity data.
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Thompson JS, Chu Y, Glass JF, Brown SA. Absence of IL-23p19 in donor allogeneic cells reduces mortality from acute GVHD. Bone Marrow Transplant 2010; 45:712-22. [PMID: 19718070 DOI: 10.1038/bmt.2009.215] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2008] [Revised: 06/17/2009] [Accepted: 07/09/2009] [Indexed: 02/05/2023]
Abstract
The p19 dimer of interleukin 23 (IL-23) has been reported to have a major role in the pathogenesis of many experimental and clinical autoimmune diseases and may also have a prominent role in transplantation. We reasoned that deficiency of p19 in the allogeneic donor transplant might reduce the inflammation caused by acute GVHD (aGVHD). The major histocompatibility complex-2 (H2(d)) BALB/c mice were subjected to 8.5 Gy TBI, followed by transplantation with 10 x 10(6) BM and 2.5 x 10(6) spleen cells from H2(d) BALB/c, H2(b) C57Bl/6 (B6) or H2(b) p19-/- donors. In all, 75% of the p19-/- transplanted mice survived, compared with only 12.5% of the B6 transplanted mice. This superior survival is correlated with significantly less severe aGVHD, absence of p19 after transplantation, less upregulation of mRNA and lower serum levels of IL-17 as compared with the B6 transplants. TBI alone significantly upregulated transforming growth factor-beta (TGF-beta), IL-6 and p19 mRNA levels in host BALB/c mice, possibly providing the milieu to induce IL-17 in p19-/- donor cells. IL-22, another cytokine, the induction of which in T-helper 17 (Th17) cells is supported by p19, was upregulated in BALB/c hosts but not in transplanted B6 or p19 donor cells, and may not have had a major role in modifying aGVHD.
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Cicchetti F, Saporta S, Hauser R, Parent M, Saint-Pierre M, Sanberg P, Li XJ, Parker J, Chu Y, Mufson E, Kordower J, Freeman T. P1.016 Neural transplants in patients with Huntington's disease undergo disease-speciflc neuronal degeneration. Parkinsonism Relat Disord 2009. [DOI: 10.1016/s1353-8020(09)70138-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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85
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Bartus R, Herzog C, Bishop K, Chu Y, Mufson E, Kordower J. P2.112 Bioactivity of CERE-120 (AAV2-neurturin gene therapy) in advanced Parkinson's disease (PD): post-mortem analysis of two autopsy cases. Parkinsonism Relat Disord 2009. [DOI: 10.1016/s1353-8020(09)70463-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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86
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Wang YH, He WM, Yu FH, Zhang LL, Cui QG, Chu Y, Dong M. Brushing effects on the growth and mechanical properties of Corispermum mongolicum vary with water regime. PLANT BIOLOGY (STUTTGART, GERMANY) 2009; 11:694-700. [PMID: 19689777 DOI: 10.1111/j.1438-8677.2008.00168.x] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
High water availability and mechanical stress can induce opposite responses in plants. In arid areas of Northern China the occurrence of high wind and high water availability tend to be negatively correlated. Since turgor pressure is a determinant of the mechanical stability of annuals, it is hypothesised that the effects of mechanical perturbation (MP) on annuals may depend on soil water availability. To test this proposal, we conducted an experiment in which a pioneering annual Corispermum mongolicum was subjected to two levels of MP and water supply, and then determined its growth and mechanical traits. Brushing had no effect on plant height and total biomass, but stimulated leaf and branch production. Water supply affected plant height, basal diameter, total biomass and stem rigidity, but not leaf and branch number, root/shoot ratio or flexibility. With high water availability, brushing stimulated the production of stiffer stems (thicker and with a higher Young's modulus) and more roots relative to shoot mass, but with low water availability MP induced the opposite response. This shows that both the degree and direction of plant responses to MP depend on the presence of other factors. We discuss how the interactive effects of MP and water availability on growth and mechanical properties may help C. mongolicum to establish in windy and arid environments.
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Niu C, Akasaka-Kennedy Y, Faustinelli P, Joshi M, Rajasekaran K, Yang H, Chu Y, Cary J, Ozias-Akins P. Antifungal Activity in Transgenic Peanut (Arachis hypogaea L.) Conferred by a Nonheme Chloroperoxidase Gene. ACTA ACUST UNITED AC 2009. [DOI: 10.3146/ps08-020.1] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Abstract
A nonheme chloroperoxidase gene (cpo-p) from Pseudomonas pyrrocinia, a growth inhibitor of mycotoxin-producing fungi, was introduced into peanut via particle bombardment. The expression of the cpo-p gene is predicted to increase pathogen defense in peanut. Embryogenic peanut tissues were bombarded with gold particles coated with plasmid pRT66 carrying the cpo-p and hygromycin phosphotransferase (hph) genes, under the control of a double CaMV 35S and a single CaMV 35S promoter, respectively. Selection for hygromycin-resistant somatic embryos was performed on a liquid medium containing 10–20 mg/L hygromycin 3–4 days after bombardment. The integration and expression of the cpo-p gene was confirmed by Southern, Northern and Western blot analyses. In vitro bioassay using crude protein extracts from transgenic T0, T1, and T4 plants showed inhibition of Aspergillus flavus hyphal growth, which could translate to a reduction in aflatoxin contamination of peanut seed.
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Oh YK, Kim W, Park K, Park M, Yang H, Kim Y, Chu Y, Kim Y, Bak J, Baang E, Yoon S, Hahn S, Lee H, Park S, Kim K, Hong J, Baek S, Kim M, Lee T, Lee S, Bae Y, Yonekawa H, Choi J, Hwang I, Kim Y, Cho K, Park Y, Kim J, Lee J, Bak J, Kwon M, Lee G, Kwak J, Ahn H, Walker M, Humphreys D, Leuer J, Hyatt A, Jackson G, Mueller D, Ivanov D. Commissioning and initial operation of KSTAR superconducting tokamak. FUSION ENGINEERING AND DESIGN 2009. [DOI: 10.1016/j.fusengdes.2008.12.099] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Chu Y, Parada I, Prince DA. Temporal and topographic alterations in expression of the alpha3 isoform of Na+, K(+)-ATPase in the rat freeze lesion model of microgyria and epileptogenesis. Neuroscience 2009; 162:339-48. [PMID: 19362129 DOI: 10.1016/j.neuroscience.2009.04.003] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2008] [Revised: 03/31/2009] [Accepted: 04/02/2009] [Indexed: 12/20/2022]
Abstract
Na(+),K(+)-ATPase contributes to the asymmetrical distribution of sodium and potassium ions across the plasma membrane and to maintenance of the membrane potential in many types of cells. Alterations in this protein may play a significant role in many human neurological disorders, including epilepsy. We studied expression of the alpha3 isoform of Na(+),K(+)-ATPase in the freeze lesion (FL) microgyrus model of developmental epileptogenesis to test the hypothesis that it is downregulated following neonatal cortical injury. FL and sham-operated rat brains were examined at postnatal day (P)7, P10, P14, P21-28 and P50-60 after placement of a transcranial freeze lesion at P0 or P1. Immunohistochemistry and in situ hybridization were used to assess the expression of the alpha3 isoform of Na(+),K(+)-ATPase (termed alpha3, or alpha3 subunit below) in neuropil and the perisomatic areas of pyramidal cells and parvalbumin-containing interneurons. There was a significant decrease (P<0.05) in alpha3 subunit immunoreactivity (IR) in the neuropil of FL cortical layer V of the P14 and P21-28 groups that extended up to 360 mum from the border of the microgyrus, an area that typically exhibits evoked epileptiform activity. Alpha-3 was decreased in the perisomatic area of pyramidal but not parvalbumin-containing cells in P21-28 FL animals. A reduction in alpha3 mRNA was observed in the neuropil of FL cortical layer V up to 1610 mum from the microgyral edge. The developmental time course for expression of the alpha3 subunit between P7 and P60 was examined in naive rat cortices and results showed that there was a significant increase in alpha3 IR between P7 and P10. The significant decreases in Na(+),K(+)-ATPase in the paramicrogyral cortex may contribute to epileptogenesis.
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Chu Y, Zupekan T, Dunn J. QS168. Transplantation of Adrenal Cortical Progenitor Cells. J Surg Res 2009. [DOI: 10.1016/j.jss.2008.11.467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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91
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Laviña B, Gracia-Sancho J, Rodríguez-Vilarrupla A, Chu Y, Heistad DD, Bosch J, García-Pagán JC. Superoxide dismutase gene transfer reduces portal pressure in CCl4 cirrhotic rats with portal hypertension. Gut 2009; 58:118-25. [PMID: 18829979 DOI: 10.1136/gut.2008.149880] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
BACKGROUND Increased intrahepatic vascular tone in cirrhosis has been attributed to a decrease of hepatic nitric oxide (NO) secondary to disturbances in the post-translational regulation of the enzyme eNOS. NO scavenging by superoxide (O(2)(-)) further contributes to a reduction of NO bioavailability in cirrhotic livers. AIM To investigate whether removing increased O(2)(-) levels could be a new therapeutic strategy to increase intrahepatic NO, improve endothelial dysfunction and reduce portal pressure in cirrhotic rats with portal hypertension. METHODS Adenoviral vectors expressing extracellular superoxide dismutase (SOD) (AdECSOD) or beta-galactosidase (Adbetagal) were injected intravenously in control and CCl(4)-induced cirrhotic rats. After 3 days, liver O(2)(-) levels were determined by dihydroethidium staining, NO bioavailability by hepatic cGMP levels, nitrotyrosinated proteins by immunohistochemistry and western blot, and endothelial function by responses to acetylcholine in perfused rat livers. Mean arterial pressure (MAP) and portal pressure were evaluated in vivo. RESULTS Transfection of cirrhotic livers with AdECSOD produced a significant reduction in O(2)(-) levels, a significant increase in hepatic cGMP, and a decrease in liver nitrotyrosinated proteins which were associated with a significant improvement in the endothelium-dependent vasodilatation to acetylcholine. In addition, in cirrhotic livers AdECSOD transfection produced a significant reduction in portal pressure (17.3 (SD 2) mm Hg vs 15 (SD 1.6) mm Hg; p<0.05) without significant changes in MAP. In control rats, AdECSOD transfection prevents the increase in portal perfusion pressure promoted by an ROS-generating system. CONCLUSIONS In cirrhotic rats, reduction of O(2)(-) by AdECSOD increases NO bioavailability, improves intrahepatic endothelial function and reduces portal pressure. These findings suggest that scavenging of O(2)(-) might be a new therapeutic strategy in the management of portal hypertension.
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Dong WB, Holbrook CC, Timper P, Brenneman TB, Chu Y, Ozias-Akins P. Resistance in Peanut Cultivars and Breeding Lines to Three Root-Knot Nematode Species. PLANT DISEASE 2008; 92:631-638. [PMID: 30769645 DOI: 10.1094/pdis-92-4-0631] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Three major species of root-knot nematode infect peanut: Meloidogyne arenaria race 1, M. hapla, and M. javanica race 3. Sources of resistance to all three nematodes are needed for developing novel peanut cultivars with broad resistance to Meloidogyne spp. Cultivars and breeding lines of peanut were evaluated for resistance to M. arenaria, M. hapla, and M. javanica in the greenhouse and in the laboratory. Twenty-six genotypes with some resistance to M. arenaria, M. javanica, or M. hapla were identified from 60 accessions based on average eggs per gram of root and gall index relative to a susceptible control. Among these, 14 genotypes were moderately to highly resistant to all three species, 5 genotypes were resistant to M. arenaria and M. javanica, 2 genotypes were resistant to M. javanica and M. hapla, 1 genotype was resistant M. arenaria alone, and 4 genotypes were resistant to M. hapla alone. Reproduction of M. arenaria on lines NR 0817, C724-19-11, and D108 was highly variable, indicating that these genotypes likely were heterogeneous for resistance. COAN, NemaTAM, C724-25-8, and the M. arenaria-resistant plants of C724-19-11 contained the dominant sequence-characterized amplified region marker (197/909) for nematode resistance. Results with the molecular markers indicate that the high resistance to M. arenaria in GP-NC WS 6 may be different from the resistance in COAN, NemaTAM, and C724-25-8. Resistance to M. arenaria was correlated with resistance to M. javanica in peanut, whereas resistance to M. hapla was not correlated with the resistance to either M. arenaria or M. javanica. The resistant selections should be valuable sources for pyramiding resistance genes to develop new cultivars with broad and durable resistance to Meloidogyne spp.
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Kim K, Lee T, Baek S, Lee S, Chu Y, Kim Y, Kim J, Park M, Oh Y. Software development of the KSTAR Tokamak Monitoring System. FUSION ENGINEERING AND DESIGN 2008. [DOI: 10.1016/j.fusengdes.2008.01.016] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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94
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Zhao S, Chu Y, Zhang C, Lin Y, Xu K, Yang P, Fan J, Liu E. Diet-induced central obesity and insulin resistance in rabbits. J Anim Physiol Anim Nutr (Berl) 2008; 92:105-11. [PMID: 18184386 DOI: 10.1111/j.1439-0396.2007.00723.x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
The present study was designed to examine whether rabbits fed a diet containing high fat and sucrose could develop obesity and insulin resistance (IR), the major pathophysiological features of metabolic syndrome. Male Japanese white rabbits were fed either a normal chow diet (control) or high fat and sucrose diet (HFSD) for 36 weeks. Plasma levels of triglycerides (TG), total cholesterol (TC), glucose and insulin were measured. To evaluate glucose metabolism, we performed an intravenous glucose tolerance test. In addition, we compared adipose tissue accumulation in HFSD-fed rabbits with that in normal rabbits. HFSD constantly and significantly led to an increase in body weight of HFSD-fed rabbits, caused by significantly higher visceral adipose tissue accumulation. Although there were no differences in plasma TG, TC, glucose, insulin levels and blood pressure between the two groups, HFSD-fed rabbits showed impaired glucose clearance associated with higher levels of insulin secretion compared to control rabbits. Our results showed that HFSD induced IR and increased adipose accumulation in rabbits, suggesting that HFSD-fed rabbits may become a model for research on human IR and obesity.
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Chu Y, Jayaraman A, Hahn J. Parameter sensitivity analysis of IL-6 signalling pathways. IET Syst Biol 2008; 1:342-52. [PMID: 18203580 DOI: 10.1049/iet-syb:20060053] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
Signal transduction pathways generally consist of a large number of individual components and have an even greater number of parameters describing their reaction kinetics. Although the structure of some signalling pathways can be found in the literature, many of the parameters are not well known and they would need to be re-estimated from experimental data for each specific case. However it is not feasible to estimate hundreds of parameters because of the cost of the experiments associated with generating data. Parameter sensitivity analysis can address this situation as it investigates how the system behaviour is changed by variations of parameters and the analysis identifies which parameters play a key role in signal transduction. Only these important parameters need then be re-estimated using data from further experiments. This article presents a detailed parameter sensitivity analysis of the JAK/STAT and MAPK signal transduction pathway that is used for signalling by the cytokine IL-6. As no parameter sensitivity analysis technique is known to work best for all situations, a comparison of the results returned by four techniques is presented: differential analysis, the Morris method, a sampling-based approach and the Fourier amplitude sensitivity test. The recruitment of the transcription factor STAT3 to the dimer of the phosphorylated receptor complex is determined as the most important step by the sensitivity analysis. Additionally, the desphosphorylation of the nuclear STAT3 dimer by PP2 as well as feedback inhibition by SOCS3 are found to play an important role for signal transduction.
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Yang Z, Rannulu NS, Chu Y, Rodgers MT. Bond Dissociation Energies and Equilibrium Structures of Cu+(MeOH)x, x = 1−6, in the Gas Phase: Competition between Solvation of the Metal Ion and Hydrogen-Bonding Interactions. J Phys Chem A 2008; 112:388-401. [DOI: 10.1021/jp076964v] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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97
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Chu Y, Deng XY, Faustinelli P, Ozias-Akins P. Bcl-xL transformed peanut (Arachis hypogaea L.) exhibits paraquat tolerance. PLANT CELL REPORTS 2008; 27:85-92. [PMID: 17891400 DOI: 10.1007/s00299-007-0444-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2007] [Revised: 08/07/2007] [Accepted: 09/03/2007] [Indexed: 05/17/2023]
Abstract
The human Bcl-xL gene was transformed into peanut cultivar Georgia Green via microprojectile bombardment. Following selection on hygromycin-containing medium and regeneration, eighty hygromycin-resistant callus clusters were recovered. Southern blot analysis of ten fertile lines revealed multiple insertions of the Bcl-xL transgene in most lines. Western blot analysis of primary plants and T1 progenies demonstrated detectable levels of Bcl-xL expression in four transgenic lines. We could not detect Bcl-xL protein in other tested lines even though transcripts were identified by RT-PCR and northern blot. Three of the western-positive transgenic lines either were sterile or the progenies lost the expressive copy of Bcl-xL. Only T1 progenies from line BX25-4-2a-19 continued to express an intermediate level of Bcl-xL. This line demonstrated paraquat tolerance at the 5 microM level. Tolerance to salt of T1 and T2 seeds from seven other transgenic lines also was tested, but no tolerance was found in these lines. A high level of Bcl-xL transgene expression may be deleterious to plant growth and development even though the gene may confer tolerance to other abiotic and biotic stresses such as drought and pathogens.
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Heistad DD, Watanabe Y, Chu Y. Gene transfer after subarachnoid hemorrhage: a tool and potential therapy. ACTA NEUROCHIRURGICA. SUPPLEMENT 2008; 104:157-159. [PMID: 18457000 DOI: 10.1007/978-3-211-75718-5_30] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
This mini-review describes steps towards gene therapy to prevent vasospasm after subarachnoid hemorrhage, and summarizes some remaining obstacles. With recombinant adenoviruses, it is now possible to prevent vasospasm in experimental animals. If an adenoviral or other effective vector is demonstrated to be safe, it is likely that gene therapy will be used in patients to prevent vasospasm.
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Ren X, Ye F, Jiang Z, Chu Y, Xiong S, Wang Y. Involvement of cellular death in TRAIL/DR5-dependent suppression induced by CD4(+)CD25(+) regulatory T cells. Cell Death Differ 2007; 14:2076-84. [PMID: 17762882 DOI: 10.1038/sj.cdd.4402220] [Citation(s) in RCA: 104] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
CD4(+)CD25(+) regulatory T cells (Treg) are potent immunosuppressive cells active in controlling normal pathological immune responses. The mechanisms of this suppression have been investigated under various conditions. In this report, tumor necrosis factor-related apoptosis inducing ligand (TRAIL)/death receptor 5 (DR5) was explored as one of the pivotal factors for the suppression and cytotoxicity induced by CD4(+)CD25(+) Treg. Cell death was involved in the suppression induced by activated CD4(+)CD25(+) Treg in vitro. The induction of CD4(+) T cell death was not mediated by the CD95/CD95L pathway, but rather depended upon the upregulation of TRAIL in the Treg. Blocking the TRAIL/DR5 pathway resulted in a significant reduction of the suppressive activity as well as the cytotoxic effects of Treg in vitro. Activated Treg displayed TRAIL-dependent cytotoxicity against CD4(+) T cells in vivo. The prolonged survival of allogeneic skin grafts induced by Treg was inhibited by DR5-blocking antibodies. Our findings suggest that the TRAIL/DR5 pathway is one of the mechanisms used by Treg to regulate immune responses both in vitro and in vivo.
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Xie F, Li D, Chu Y, Li L, Magnier S, Sovkov VB, Ivanov VS. The K2 2(3)Pi(g) state: new observations and analysis. J Phys Chem A 2006; 110:11260-4. [PMID: 17004735 DOI: 10.1021/jp063266m] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Totally 3045 transitions into the 2(3)Pi(g) v = 0-42, J = 0-103, Omega = 0, 1, 2 rovibrational levels have been observed by infrared-infrared double resonance fluorescence excitation and two-photon spectroscopy. Molecular constants including the spin-orbit interaction parameters are obtained. Although the K2 2(3)Pi(g) state dissociates to the 4s + 3d atomic limit, it is strongly mixed with the 3P ionic states in the range of the potential well. This mixing results in a relatively large equilibrium internuclear distance Re = 5.254 A and a larger spin-orbit constant A0 approximately 14.17 cm(-1) than that of the atomic limit -2.33 cm(-1). Strong perturbations of the 2(3)Pi(g) levels observed are attributed to the spin-orbit coupling with the 4(1)Sigma(g)+ state.
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