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Aburel PS, Aigbirhio F, Alexakis E, Audrain H, Austin CA, Barry C, Bender D, Bushby N, Cable K, Carroll MA, Deng H, Ellames G, Fellows I, Gardiner JM, Geach NJ, Gee AD, Gerhard M, Guthrie EJ, Hamprecht DW, Harding JR, Hartley RC, Harwood SJ, Herbert JM, Hickey MJ, Jones JR, Kamara LM, Kingston LP, Lawrie KWM, Lewis RJ, Lockhart A, Lockley WJS, Macritchie J, MacGlinchey R, Macleod C, Martarello L, Mather AN, Matthews JC, McAuley BM, McKiernan GJ, McNeill A, Murrell V, O'Hagan D, Oldfield MF, Panchal N, Passchier J, Pike VW, Roberts CF, Rustidge DC, Smith T, Stimpson W, Taylor K, Widdowson DA, Willis CL, Wilkinson DJ, Wilson I, Zinsser W, O'Hagan D, Deng H, Martarello L, Gee AD, Lockhart A, MacGlinchey R, Carroll MA, Kamara LM, Widdowson DA, Pike VW, Gardiner JM, Panchal N, Stimpson W, Herbert JM, Ellames G, Alexakis E, Hickey MJ, Kingston LP, Jones JR, Lockley WJS, Mather AN, McAuley BM, Smith T, Wilkinson DJ, Rustidge DC, Geach NJ, Oldfield MF, Guthrie EJ, Macleod C, McKiernan GJ, Roberts CF, Austin CA, Macritchie J, Hamprecht DW, Hartley RC, Wilson I, Harwood SJ, Herbert JM, Barry C, Bushby N, Harding J, Willis C, Alexakis E, Jones JR, Lockley WJS, Lockley WJS, Lewis RJ, Wilkinson DJ, Jones JR, Harwood SJ, Gerhard M, Zinsser W, Lawrie KWM, Martarello L, Gee AD, Hélène Audrain, Aburel PS, Bender D, McNeill A, Murrell V, Taylor K, Stimpson W, Panchal N, Gardiner JM, Herbert JM, Ellames GJ, Passchier J, Bender D, Lawrie KWM, Fellows I, Matthews JC, Gee AD. 14th International Isotope Society (UK group) symposium. J Labelled Comp Radiopharm 2005. [DOI: 10.1002/jlcr.948] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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202
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Deng H, Ye ZH, Wong MH. Accumulation of lead, zinc, copper and cadmium by 12 wetland plant species thriving in metal-contaminated sites in China. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2004; 132:29-40. [PMID: 15276271 DOI: 10.1016/j.envpol.2004.03.030] [Citation(s) in RCA: 260] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2003] [Accepted: 03/29/2004] [Indexed: 05/22/2023]
Abstract
The concentrations of lead, zinc, copper and cadmium accumulated by 12 emergent-rooted wetland plant species including different populations of Leersia hexandra, Juncus effusus and Equisetum ramosisti were investigated in field conditions of China. The results showed that metal accumulation by wetland plants differed among species, populations and tissues. Populations grown in substrata with elevated metals contained significantly higher metals in plants. Metals accumulated by wetland plants were mostly distributed in root tissues, suggesting that an exclusion strategy for metal tolerance widely exists in them. That some species/populations could accumulate relatively high metal concentrations (far above the toxic concentration to plants) in their shoots indicates that internal detoxification metal tolerance mechanism(s) are also included. The factors affecting metal accumulation by wetland plants include metal concentrations, pH, and nutrient status in substrata. Mostly concentrations of Pb and Cu in both aboveground and underground tissues of the plants were significantly positively related to their total and/or DTPA-extractable fractions in substrata while negatively to soil N and P, respectively. The potential use of these wetland plants in phytoremediation is also discussed.
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203
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Zheng K, Deng H, Liu X, Li H, Chao H, Ji L. Electronic structures, DNA-binding and related properties of complexes [Ru(bpy)2L]2+ (L=ip, pip, hpip). ACTA ACUST UNITED AC 2004. [DOI: 10.1016/j.theochem.2004.05.026] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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204
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Wu LQ, Yang YF, Zheng D, Deng H, Pan Q, Zhao TL, Cai F, Feng Y, Long ZG, Dai HP, Tang BS, Yang YJ, Deng HX, Xia K, Xia JH. Confirmation and refinement of a genetic locus for disseminated superficial actinic porokeratosis (DSAP1) at 12q23.2-24.1. Br J Dermatol 2004; 150:999-1004. [PMID: 15149516 DOI: 10.1111/j.1365-2133.2004.05912.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
BACKGROUND Our previous study has identified two loci for disseminated superficial actinic porokeratosis (DSAP), but the genes responsible are still unknown. OBJECTIVES To narrow down the candidate regions and to assess candidate genes. METHODS A genome-wide scan and linkage analysis were carried out in a newly collected five-generation Chinese family with DSAP. In addition, six candidate genes were screened for possible DSAP-associated mutations. RESULTS DSAP in this family was associated with chromosome 12q. Fine mapping and haplotype construction refined the DSAP1 locus to a 4.4-cM interval. No disease-associated mutation was detected in CRY1, C4ST1, TXNRD1, HCF2, CMKLR1 or KIAA0789 genes. CONCLUSIONS The DSAP1 locus was localized to a 4.4-cM interval at chromosome 12q23.2-24.1. CRY1, C4ST1, TXNRD1, HCF2, CMKLR1 and KIAA0789 genes were not associated with DSAP1.
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205
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Li HX, Deng H, Zhong J. Model-Based Integration of Control and Supervision For One Kind of Curing Process. ACTA ACUST UNITED AC 2004. [DOI: 10.1109/tepm.2004.843086] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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206
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Bennett GW, Bousquet B, Brown HN, Bunce G, Carey RM, Cushman P, Danby GT, Debevec PT, Deile M, Deng H, Dhawan SK, Druzhinin VP, Duong L, Farley FJM, Fedotovich GV, Gray FE, Grigoriev D, Grosse-Perdekamp M, Grossmann A, Hare MF, Hertzog DW, Huang X, Hughes VW, Iwasaki M, Jungmann K, Kawall D, Khazin BI, Krienen F, Kronkvist I, Lam A, Larsen R, Lee YY, Logashenko I, McNabb R, Meng W, Miller JP, Morse WM, Nikas D, Onderwater CJG, Orlov Y, Ozben CS, Paley JM, Peng Q, Polly CC, Pretz J, Prigl R, Zu Putlitz G, Qian T, Redin SI, Rind O, Roberts BL, Ryskulov N, Semertzidis YK, Shagin P, Shatunov YM, Sichtermann EP, Solodov E, Sossong M, Sulak LR, Trofimov A, von Walter P, Yamamoto A. Measurement of the negative muon anomalous magnetic moment to 0.7 ppm. PHYSICAL REVIEW LETTERS 2004; 92:161802. [PMID: 15169217 DOI: 10.1103/physrevlett.92.161802] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2004] [Indexed: 05/24/2023]
Abstract
The anomalous magnetic moment of the negative muon has been measured to a precision of 0.7 ppm (ppm) at the Brookhaven Alternating Gradient Synchrotron. This result is based on data collected in 2001, and is over an order of magnitude more precise than the previous measurement for the negative muon. The result a(mu(-))=11 659 214(8)(3) x 10(-10) (0.7 ppm), where the first uncertainty is statistical and the second is systematic, is consistent with previous measurements of the anomaly for the positive and the negative muon. The average of the measurements of the muon anomaly is a(mu)(exp)=11 659 208(6) x 10(-10) (0.5 ppm).
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207
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Deng H, Tanojo H, Lenn J, Cuesico C. In vitro human skin study of combined application of pimecrolimus cream and betamethasone 17-valerate. J Am Acad Dermatol 2004. [DOI: 10.1016/j.jaad.2003.11.037] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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208
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Liu YZ, Xu FH, Shen H, Deng H, Liu YJ, Zhao LJ, Dvornyk V, Conway T, Li JL, Huang QY, Davies KM, Recker RR, Deng HW. Confirmation linkage study in support of the X chromosome harbouring a QTL underlying human height variation. J Med Genet 2004; 40:825-31. [PMID: 14627672 PMCID: PMC1735321 DOI: 10.1136/jmg.40.11.825] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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209
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Liu L, Deng H, Sun X, Zhao J, Li X. Crit Care 2004; 8:P142. [DOI: 10.1186/cc2609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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210
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Rajeevan H, Osier MV, Cheung KH, Deng H, Druskin L, Heinzen R, Kidd JR, Stein S, Pakstis AJ, Tosches NP, Yeh CC, Miller PL, Kidd KK. ALFRED: the ALelle FREquency Database. Update. Nucleic Acids Res 2003; 31:270-1. [PMID: 12519999 PMCID: PMC165490 DOI: 10.1093/nar/gkg043] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Elaboration of ALFRED (http://alfred.med.yale.edu) is being continued in two directions. One of which is developing tools for efficiently annotating the entries and checking the integrity of the data already in the database while the other is to increase the quantity and accessibility of data. Information contained in ALFRED such as, polymorphic sites, number of populations and frequency tables (one sample typed for one site) has significantly increased.
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211
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Xia K, Deng H, Xia JH, Zheng D, Zhang HL, Lu CY, Li CQ, Pan Q, Dai HP, Yang YF, Long ZG, Deng HX. A novel locus (DSAP2) for disseminated superficial actinic porokeratosis maps to chromosome 15q25.1-26.1. Br J Dermatol 2002; 147:650-4. [PMID: 12366408 DOI: 10.1046/j.1365-2133.2002.05058.x] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
BACKGROUND Disseminated superficial actinic porokeratosis (DSAP) is a chronic cutaneous disorder characterized by multiple superficial keratotic lesions surrounded by a slightly raised keratotic border. It develops in teenagers in sun-exposed areas of skin and usually follows an autosomal dominant inheritance pattern. The first locus for DSAP was localized to chromosome 12q23.2-24.1, but no gene responsible for porokeratosis has been identified to date. OBJECTIVES To determine whether DSAP is a genetically heterogeneous disorder and to identify the disease gene locus in a three-generation Chinese family with DSAP. METHODS Genetic linkage analysis was carried out in this family using 15 microsatellite markers between D12S1671 and D12S369 on chromosome 12q, followed by a genome-wide scan with 382 microsatellite markers from the autosomes. RESULTS Genetic linkage analysis with chromosome 12q markers suggested that the locus in this family is not linked to chromosome 12q. A genome-wide scan and fine mapping finally localized the locus for DSAP in this family to a 6.4-cM region between markers D15S1023 and D15S1030 at chromosome 15q25.1-26.1. This DSAP locus was named DSAP2. CONCLUSIONS The previous results and this study have shown that DSAP is a genetically heterogeneous disorder; a novel locus for DSAP, termed DSAP2, was mapped to a 6.4-cM region between markers D15S1023 and D15S1030.
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212
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Li S, Zhang B, Deng H. [Momordica charantia proteins against coxsackievirus B3 infection in vitro]. HUNAN YI KE DA XUE XUE BAO = HUNAN YIKE DAXUE XUEBAO = BULLETIN OF HUNAN MEDICAL UNIVERSITY 2002; 24:583-4. [PMID: 12080730] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
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213
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Deng JK, Li GQ, Wang XD, Huang JD, Deng H, Ning CG, Wang Y, Zheng Y. Orbital electron densities of ethane: Comparison of electron momentum spectroscopy measurements with near Hartree–Fock limit and density functional theory calculations. J Chem Phys 2002. [DOI: 10.1063/1.1498816] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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214
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Bennett GW, Bousquet B, Brown HN, Bunce G, Carey RM, Cushman P, Danby GT, Debevec PT, Deile M, Deng H, Deninger W, Dhawan SK, Druzhinin VP, Duong L, Efstathiadis E, Farley FJM, Fedotovich GV, Giron S, Gray FE, Grigoriev D, Grosse-Perdekamp M, Grossmann A, Hare MF, Hertzog DW, Huang X, Hughes VW, Iwasaki M, Jungmann K, Kawall D, Khazin BI, Kindem J, Krienen F, Kronkvist I, Lam A, Larsen R, Lee YY, Logashenko I, McNabb R, Meng W, Mi J, Miller JP, Morse WM, Nikas D, Onderwater CJG, Orlov Y, Ozben CS, Paley JM, Peng Q, Polly CC, Pretz J, Prigl R, Zu Putlitz G, Qian T, Redin SI, Rind O, Roberts BL, Ryskulov N, Shagin P, Semertzidis YK, Shatunov YM, Sichtermann EP, Solodov E, Sossong M, Steinmetz A, Sulak LR, Trofimov A, Urner D, Von Walter P, Warburton D, Yamamoto A. Measurement of the positive muon anomalous magnetic moment to 0.7 ppm. PHYSICAL REVIEW LETTERS 2002; 89:101804. [PMID: 12225185 DOI: 10.1103/physrevlett.89.101804] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2002] [Indexed: 05/23/2023]
Abstract
A higher precision measurement of the anomalous g value, a(mu)=(g-2)/2, for the positive muon has been made at the Brookhaven Alternating Gradient Synchrotron, based on data collected in the year 2000. The result a(mu(+))=11 659 204(7)(5)x10(-10) (0.7 ppm) is in good agreement with previous measurements and has an error about one-half that of the combined previous data. The present world average experimental value is a(mu)(expt)=11 659 203(8)x10(-10) (0.7 ppm).
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Li ZD, Deng H, Liu CH, Song YH, Sha J, Wang N, Wei H. Production of duck-chicken chimeras by transferring early blastodermal cells. Poult Sci 2002; 81:1360-4. [PMID: 12269617 DOI: 10.1093/ps/81.9.1360] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Duck blastodermal cells isolated from Stage X embryos of Maya ducks were injected into subgerminal cavity of recipient Stage X chicken embryos treated with gamma-irradiation or untreated. Eleven somatic chimeras were obtained based on plumage color and were raised to sexual maturity. To test for germline chimerism, progeny tests were performed by mating the chimeras with Maya ducks. A total of 622 eggs was collected and incubated. Fertility rate and hatchability were 2.9% (18/622) and 1.0% (6/622), respectively. The six duck hatchlings were from Chimera 9801 and were considered to be derived from the germ cells developed from the donor Maya blastodermal cells, indicating that Chimera 9801 is a germline chimera.
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216
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Xiao F, Wei Y, Yang L, Zhao X, Tian L, Ding Z, Yuan S, Lou Y, Liu F, Wen Y, Li J, Deng H, Kang B, Mao Y, Lei S, He Q, Su J, Lu Y, Niu T, Hou J, Huang MJ. A gene therapy for cancer based on the angiogenesis inhibitor, vasostatin. Gene Ther 2002; 9:1207-13. [PMID: 12215887 DOI: 10.1038/sj.gt.3301788] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2002] [Accepted: 04/19/2002] [Indexed: 11/08/2022]
Abstract
The growth and persistence of solid tumors and their metastasis are angiogenesis-dependent. Vasostatin, the N-terminal domain of calreticulin inclusive of amino acids 1-180, is a potent angiogenesis inhibitor. To investigate whether intramuscular administration of vasostatin gene has the antitumor activity in mouse tumor models, we constructed a plasmid DNA encoding vasostatin and a control vector. Production and secretion of vasostatin protein by COS cells transfected with the plasmid DNA encoding vasostatin (pSecTag2B-vaso) were confirmed by Western blot analysis and ELISA. Conditioned medium from vasostatin-transfected COS cells apparently inhibited human umbilical vein endothelial cell (HUVEC) and mouse endothelial cell (SVEC4-10) proliferation, compared with conditioned medium from the COS cells transfected with control vector or non-transfected cells. Treatment with pSecTag2B-vaso twice weekly for 4 weeks resulted in the inhibition of tumor growth and the prolongation of the survival of tumor-bearing mice. The sustained high level of vasostatin protein in serum could be identified in ELISA. Angiogenesis was apparently inhibited in tumor by immunohistochemical analysis. Angiogenesis was also inhibited in the chicken embryo CAM assay and mouse corneal micropocket assay. The increased apoptotic cells were found within the tumor tissues from the mice treated with plasmid DNA encoding vasostatin. Taken together, the data in the present study indicate that the cancer gene therapy by the intramuscular delivery of plasmid DNA encoding vasostatin, is effective in the inhibition of the systemic angiogenesis and tumor growth in murine models. The present findings also provide further evidence of the anti-tumor effects of the vasostatin, and may be of importance for the further exploration of the application of this molecule in the treatment of cancer.
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217
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Deng H, Zhou H, Sun M. [Roles of sex hormones and oxygen free radical in coronary heart disease]. HUNAN YI KE DA XUE XUE BAO = HUNAN YIKE DAXUE XUEBAO = BULLETIN OF HUNAN MEDICAL UNIVERSITY 2002; 24:343-6. [PMID: 12080642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Abstract
To examine the roles of sex hormones and oxygen free radical(OFR) in coronary heart disease (CHD), the serum estradiol(E2), testosterone(T), SOD, MDA and lipid levels were measured in 44 postmenopausal women with CHD and 22 health women. Mean levels of T and MDA were significantly higher while mean levels of SOD and E2 were significantly lower in CHD group than those in control group. On relative analysis, there was a positive correlation between E2 and SOD, while a negative correlation was observed between T and MDA in CHD group. Eighteen postmenopausal women with CHD had been receiving nilestriol replacement therapy for 12 weeks. The serum SOD and HDL-C/TC levels increased significantly, but LDL-C and MDA decreased significantly. The overall data suggest that OFR plays an important role in CHD; Low E2 levels is a risk factor of CHD in postmenopausal women; Nilestriol replacement therapy can improve the metabolism of serum lipids and inhibit lipid peroxidation, therefore, it may be of benefit to postmenopausal women with CHD.
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218
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Deng H, Huang L, Groesbeek M, Lugtenburg J, Callender RH. Vibrational Analysis of a Retinal Protonated Schiff Base Analog. ACTA ACUST UNITED AC 2002. [DOI: 10.1021/j100069a002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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219
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Ray WJ, Crans DC, Zheng J, Burgner JW, Deng H, Mahroof-Tahir M. Structure of the Dimeric Ethylene Glycol-Vanadate Complex and Other 1,2-Diol-Vanadate Complexes in Aqueous Solution: Vanadate-Derived Transition-State Analog Complexes of Phosphotransferases. J Am Chem Soc 2002. [DOI: 10.1021/ja00127a015] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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220
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Tonge PJ, Carey PR, Callender R, Deng H, Ekiel I, Muhandiram DR. Characterization of trans- and cis-5-methylthienylacryloyl chymotrypsin using Raman difference spectroscopy, NMR, and kinetics: carbonyl environment and reactivity. J Am Chem Soc 2002. [DOI: 10.1021/ja00072a031] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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221
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Deng HW, Livshits G, Yakovenko K, Xu FH, Conway T, Davies KM, Deng H, Recker RR. Evidence for a major gene for bone mineral density/content in human pedigrees identified via probands with extreme bone mineral density. Ann Hum Genet 2002; 66:61-74. [PMID: 12015001 DOI: 10.1017/s0003480001008958] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Bone mineral content (BMC) and/or bone mineral density (BMD, i.e. BMC scaled by bone size) are major determinants for osteoporosis, which is a serious health problem. The major determinant of variation in BMD/BMC is genetic. The few studies now available are inconsistent in the identification and/or even in the existence of major gene(s) for BMD/BMC. In 51 human pedigrees with 941 individuals (526 measured for phenotypes) identified via probands with extreme BMD values, we performed complex segregation analyses to test the existence of a genetic locus with a major effect on BMD/BMC variation. We analyzed BMD and BMC at the spine, hip and wrist jointly by employing, as the study phenotype, factor scores (FS) of the principle component that explains approximately 75% of the total BMD/BMC variation at the three sites. The results indicate that a major gene exists with a codominant effect that is responsible for approximately 16% of the FS variation when adjusted for significant effects of sex, body weight and age. A significant genotype-x-sex-x-age interaction was found, which may explain approximately 14% of the FS variation after adjusting for body weight. Testing of various models did not provide support for shared familial environmental effects but suggested the existence of residual polygenic effects, which may explain approximately 50% of the FS variation when adjusting for sex, body weight and age. This study indicates a promising aspect of studies to identify a major gene for BMD/BMC variation in our pedigrees identified via extreme probands.
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Aangelidaki I, Ahrin BK, Deng H, Schmidt JE. Anaerobic digestion of olive oil mill effluents together with swine manure in UASB reactors. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2002; 45:213-218. [PMID: 12188547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Combined anaerobic digestion of olive oil mill effluent (OME) with swine manure, was investigated. In batch experiments was shown that for anaerobic degradation of OME alone nitrogen addition was needed. A COD:N ratio in the range of 65:1 to 126:1 was necessary for the optimal degradation process. Furthermore, it was found that methane productions rates during digestion of either swine manure alone or OME alone were much lower than the rates achieved when OME and manure were digested together. Admixing OME with manure at a concentration of 5 to 10% OME resulted in the highest methane production rates. Using upflow anaerobic sludge blanket (UASB) reactors, it was shown that codigestion of OME with swine manure (up to 50% OME) was successful with a COD reduction up to 75%. The process was adapted for degradation of OME with stepwise increase of the OME load to the UASB reactor. The results showed that the high content of ammonia in swine manure, together with content of other nutrients, make it possible to degrade OME without addition of external alkalinity and without addition of external nitrogen source. Anaerobic treatment of OME in UASB reactors resulted in reduction of simple phenolic compounds such as mequinol, phenyl ethyl alcohol and ethyl methyl phenol. After anaerobic treatment the concentration of these compounds was reduced between 75 and 100%. However, the concentration of some degradation products such as methyl phenol and ethyl phenol were detected in significantly higher concentrations after treatment, indicating that the process has to be further optimised to achieve satisfactory removal of all xenobiotic compounds.
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Zou XH, Li H, Yang G, Deng H, Liu J, Li RH, Zhang QL, Xiong Y, Ji LN. Synthesis, characterization, and crystal structure of a functionalized ruthenium(II) polypyridyl complex with fused triazinone as ligand. Inorg Chem 2001; 40:7091-5. [PMID: 11754296 DOI: 10.1021/ic001429u] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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224
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Deng H, Callender R, Howell E. Vibrational structure of dihydrofolate bound to R67 dihydrofolate reductase. J Biol Chem 2001; 276:48956-60. [PMID: 11679579 DOI: 10.1074/jbc.m105107200] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
R67 is a Type II dihydrofolate reductase (DHFR) that catalyzes the reduction of dihydrofolate (DHF) to tetrahydrofolate by facilitating the addition of a proton to N5 of DHF and the transfer of a hydride ion from NADPH to C6. Because this enzyme is a plasmid-encoded DHFR from trimethoprim-resistant bacteria, extensive studies on R67 with various methods have been performed to elucidate its reaction mechanism. Here, Raman difference measurements, conducted on the ternary complex of R67.NADP(+).DHF believed to be an accurate mimic of the productive DHFR.NADPH.DHF complex, show that the pK(a) of N5 in the complex is less than 4. This is in clear contrast to the behavior observed in Escherichia coli DHFR, a substantially more efficient enzyme, where the pK(a) of bound DHF at N5 is increased to 6.5 compared with its solution value of 2.6. A comparison of the ternary complexes in R67 and E. coli DHFRs suggests that enzymic raising of the pK(a) at N5 can significantly increase the catalytic efficiency of the hydride transfer step. However, R67 shows that even without such a strategy an effective DHFR can still be designed.
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Sauve AA, Celic I, Avalos J, Deng H, Boeke JD, Schramm VL. Chemistry of gene silencing: the mechanism of NAD+-dependent deacetylation reactions. Biochemistry 2001; 40:15456-63. [PMID: 11747420 DOI: 10.1021/bi011858j] [Citation(s) in RCA: 246] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The Sir2 enzyme family is responsible for a newly classified chemical reaction, NAD(+)-dependent protein deacetylation. New peptide substrates, the reaction mechanism, and the products of the acetyl transfer to NAD(+) are described for SIR2. The final products of SIR2 reactions are the deacetylated peptide and the 2' and 3' regioisomers of O-acetyl ADP ribose (AADPR), formed through an alpha-1'-acetyl ADP ribose intermediate and intramolecular transesterification reactions (2' --> 3'). The regioisomers, their anomeric forms, the interconversion rates, and the reaction equilibria were characterized by NMR, HPLC, 18O exchange, and MS methods. The mechanism of acetyl transfer to NAD(+) includes (1) ADP ribosylation of the peptide acyl oxygen to form a high-energy O-alkyl amidate intermediate, (2) attack of the 2'-OH group on the amidate to form a 1',2'-acyloxonium species, (3) hydrolysis to 2'-AADPR by the attack of water on the carbonyl carbon, and (4) an SIR2-independent transesterification equilibrating the 2'- and 3'-AADPRs. This mechanism is unprecedented in ADP-ribosyl transferase enzymology. The 2'- and 3'-AADPR products are candidate molecules for SIR2-initiated signaling pathways.
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