Pervasive density-dependent recruitment enhances seedling diversity in a tropical forest

Effects of dung and seed size on secondary dispersal, seed predation, and seedling establishment of rain forest trees

Seeds dispersed by tropical, arboreal mammals are usually deposited singly and without dung or in clumps of fecal material. After dispersal through defecation by mammals, most seeds are secondarily dispersed by dung beetles or consumed by rodents. These post-dispersal, plant-animal interactions are likely to interact themselves, as seeds buried by dung beetles are less likely to be found by rodents than unburied seeds. In a series of three experiments with seeds of 15 species in central Amazonia (Brazil), we determined (1) how presence and amount of dung associated with seeds influences long-term seed fate and seedling establishment, (2) how deeply dung beetles bury seeds and how burial depth affects seedling establishment, and (3) how seed size affects the interaction between seeds, dung beetles, and rodents. Our overall goal was to understand how post-dispersal plant-animal interactions determine the link between primary seed dispersal and seedling establishment. On average, 43% of seeds surrounded by dung were buried by dung beetles, compared to 0% of seeds not surrounded by dung ( n=2,156). Seeds in dung, however, tended to be more prone than bare seeds to predation by rodents. Of seeds in dung, probability of burial was negatively related to seed size and positively related to amount of dung. Burial of seeds decreased the probability of seed predation by rodents three-fold, and increased the probability of seedling establishment two-fold. Mean burial depth was 4 cm (0.5-20 cm) and was not related to seed size, contrary to previous studies. Probability of seedling establishment was negatively correlated with burial depth and not related to seed size at 5 or 10 cm depths. These results illustrate a complex web of interactions among dung beetles, rodents, and dispersed seeds. These interactions affect the probability of seedling establishment and are themselves strongly tied to how seeds are deposited by primary dispersers. More generally, our results emphasize the importance of looking beyond a single type of plant-animal interaction (e.g., seed dispersal or seed predation) to incorporate potential effects of interacting interactions.

Forest fragmentation severs mutualism between seed dispersers and an endemic African tree

Because bird species are lost when forests are fragmented into small parcels, trees that depend on fruit-eating birds for seed dispersal may fail to recruit seedlings if dispersal agents disappear. We tested this prediction in rainforest in the East Usambara Mountains of Tanzania, by using the endemic tree Leptonychia usambarensis (Sterculiaceae) and birds that disperse its seeds. We investigated bird abundance and Leptonychia dispersal ecology in fragments isolated for >70 yr, as compared with 3,500 ha of continuous forest. Birds that dispersed Leptonychia seeds in continuous forest were rare or absent in small fragments, where fewer seeds were removed from each tree, far fewer seedlings occurred >10 m from parent trees, and far more seedlings occurred in dense aggregations under parental crowns. Overall, our samples showed that fewer juvenile Leptonychia recruited in fragments than in continuous forest. We provide solid evidence that deficient dispersal due to habitat fragmentation seriously impacts the reproductive cycle of a tropical bird-dispersed tree.

Parasitic exploitation as an engine of diversity

Parasitic exploitation occurs within and between a wide variety of taxa in a plethora of diverse contexts. Theoretical and empirical analyses indicate that parasitic exploitation can generate substantial genetic and phenotypic polymorphism within species. Under some circumstances, parasitic exploitation may also be an important factor causing reproductive isolation and promoting speciation. Here we review research relevant to the relationship between parasitic exploitation, within species-polymorphism, and speciation in some of the major arenas in which such exploitation has been studied. This includes research on the vertebrate major histocompatibility loci, plant-pathogen interactions, the evolution of sexual reproduction, intragenomic conflict, sexual conflict, kin mimicry and social parasitism, tropical forest diversity and the evolution of language. We conclude by discussing some of the issues raised by comparing the effect of parasitic exploitation on polymorphism and speciation in different contexts.

Density-dependent shoot-borer herbivory increases the age of first reproduction and mortality of neotropical tree saplings

Shoot herbivory by the sapling specialist shoot-borer Cromarcha stroudagnesia (Lepidoptera, Pyralidae, Chrysauginae) is shown to have large direct and indirect effects on the rates of height increment and mortality of saplings of its host tree, Tabebuia ochracea (Bignoniaceae), in the secondary successional tropical dry forests of the Area de Conservación Guanacaste, Costa Rica. Experiments and field observations over 3-4 years show a substantial reduction in sapling height increments due to C. stroudagnesia herbivory, of equivalent magnitude to the difference in height increments between undamaged saplings in canopy gaps and full understorey shade. Extrapolating this data at average amounts of C. stroudagnesia herbivory increases the duration of the pre-reproductive sapling life stage by about 40% relative to undamaged plants. This is an underestimate, as top shoot herbivory by C. stroudagnesia also increased the probability of canopy gap saplings being overtopped and shaded by surrounding vegetation. Sapling mortality was increased by C. stroudagnesia herbivory, with 11.8% of the most heavily damaged young saplings dying in 3 years while no undamaged saplings died. Cromarcha stroudagnesia herbivory strongly increases with the number of conspecific T. ochracea saplings and the number of conspecific shoots within 50 m of focal saplings. It is therefore likely to disproportionately decrease the number of saplings and rate of recruitment to reproductive age in areas of high conspecific sapling density. These results suggest that sapling herbivory, especially herbivory of terminal meristems, has an important but largely unexplored influence on the population dynamics of tropical tree species. They further demonstrate that sapling herbivory by insects, in addition to the well-studied insect predation and herbivory of seedlings, is likely to influence tree species coexistence in tropical forests.

Soil community feedback and the coexistence of competitors: conceptual frameworks and empirical tests

A growing body of empirical work suggests that soil organisms can exert a strong role in plant community dynamics and may contribute to the coexistence of plant species. Some of this evidence comes from examining the feedback on plant growth through changes in the composition of the soil community. Host specific changes in soil community composition can generate feedback on plant growth and this feedback can be positive or negative. Previous work has demonstrated that negative soil community feedback can contribute to the coexistence of equivalent competitors. In this paper, I show that negative soil community feedback can also contribute to the coexistence of strong competitors, maintaining plant species that would not coexist in the absence of soil community dynamics. I review the evidence for soil community feedback and find accumulating evidence that soil community feedback can be common, strongly negative, and generated by a variety of complementary soil microbial mechanisms, including host-specific changes in the composition of the rhizosphere bacteria, nematodes, pathogenic fungi, and mycorrhizal fungi. Finally, I suggest topics needing further examination.

Molecular diversity of arbuscular mycorrhizal fungi and patterns of host association over time and space in a tropical forest

We have used molecular techniques to investigate the diversity and distribution of the arbuscular mycorrhizal (AM) fungi colonizing tree seedling roots in the tropical forest on Barro Colorado Island (BCI), Republic of Panama. In the first year, we sampled newly emergent seedlings of the understory treelet Faramea occidentalis and the canopy emergent Tetragastris panamensis, from mixed seedling carpets at each of two sites. The following year we sampled surviving seedlings from these cohorts. The roots of 48 plants were analysed using AM fungal-specific primers to amplify and clone partial small subunit (SSU) ribosomal RNA gene sequences. Over 1300 clones were screened for random fragment length polymorphism (RFLP) variation and 7% of these were sequenced. Compared with AM fungal communities sampled from temperate habitats using the same method, the overall diversity was high, with a total of 30 AM fungal types identified. Seventeen of these types have not been recorded previously, with the remainder being similar to types reported from temperate habitats. The tropical mycorrhizal population showed significant spatial heterogeneity and nonrandom associations with the different hosts. Moreover there was a strong shift in the mycorrhizal communities over time. AM fungal types that were dominant in the newly germinated seedlings were almost entirely replaced by previously rare types in the surviving seedlings the following year. The high diversity and huge variation detected across time points, sites and hosts, implies that the AM fungal types are ecologically distinct and thus may have the potential to influence recruitment and host composition in tropical forests.

A spatially explicit neutral model of beta-diversity in tropical forests

To represent species turnover in tropical rain forest, we use a neutral model where a tree's fate is not affected by what species it belongs to, seeds disperse a limited distance from their parents, and speciation is in equilibrium with random extinction. We calculate the similarity function, the probability F(r) that two trees separated by a distance r belong to the same species, assuming that the dispersal kernel P(r), the distribution of seeds about their parents and the prospects of mortality and reproduction, are the same for all trees regardless of their species. If P(r) is radially symmetric Gaussian with mean-square dispersal distance sigma, F(r) can be expressed in closed form. If P(r) is a radially symmetric Cauchy distribution, then, in two-dimensional space, F(r) is proportional to 1/r for large r. Analytical results are compared with individual-based simulations, and the relevance to field observations is discussed.

Density-dependent mortality and the latitudinal gradient in species diversity

Ecologists have long postulated that density-dependent mortality maintains high tree diversity in the tropics. If species experience greater mortality when abundant, then more rare species can persist. Agents of density-dependent mortality (such as host-specific predators, and pathogens) may be more prevalent or have stronger effects in tropical forests, because they are not limited by climatic factors. If so, decreasing density-dependent mortality with increasing latitude could partially explain the observed latitudinal gradient in tree diversity. This hypothesis has never been tested with latitudinal data. Here we show that several temperate tree species experience density-dependent mortality between seed dispersal and seedling establishment. The proportion of species affected is equivalent to that in tropical forests, failing to support the hypothesis that this mechanism is more prevalent at tropical latitudes. We further show that density-dependent mortality is misinterpreted in previous studies. Our results and evidence from other studies suggest that density-dependent mortality is important in many forests. Thus, unless the strength of density-dependent mortality varies with latitude, this mechanism is not likely to explain the high diversity of tropical forests.

Evolutionary ecology of plant diseases in natural ecosystems

Plant pathogens cause mortality and reduce fecundity of individual plants, drive host population dynamics, and affect the structure and composition of natural plant communities. Pathogens are responsible for both numerical changes in host populations and evolutionary changes through selection for resistant genotypes. Linking such ecological and evolutionary dynamics has been the focus of a growing body of literature on the effects of plant diseases in natural ecosystems. A guiding principle is the importance of understanding the spatial and temporal scales at which plants and pathogens interact. This review summarizes the effects of diseases on populations of wild plants, focusing in particular on the mediation of plant competition and succession, the maintenance of plant species diversity, as well as the process of rapid evolutionary changes in host-pathogen symbioses.

Fine-scale spatial genetic structure of eight tropical tree species as analysed by RAPDs

The fine-scale spatial genetic structure of eight tropical tree species (Chrysophyllum sanguinolentum, Carapa procera, Dicorynia guianensis, Eperua grandiflora, Moronobea coccinea, Symphonia globulifera, Virola michelii, Vouacapoua americana) was studied in populations that were part of a silvicultural trial in French Guiana. The species analysed have different spatial distribution, sexual system, pollen and seed dispersal agents, flowering phenology and environmental demands. The spatial position of trees and a RAPD data set for each species were combined using a multivariate genetic distance method to estimate spatial genetic structure. A significant spatial genetic structure was found for four of the eight species. In contrast to most observations in temperate forests, where spatial structure is not usually detected at distances greater than 50 m, significant genetic structure was found at distances up to 300 m. The relationships between spatial genetic structure and life history characteristics are discussed.

Seed dispersal by animals: exact identification of source trees with endocarp DNA microsatellites

A long-standing challenge in studies of seed dispersal by animal frugivores has been the characterization of the spatial relationships between dispersed seeds and the maternal plants, i.e. the seed shadow. The difficulties to track unambiguously the origin of frugivore-dispersed seeds in natural communities has been considered an unavoidable limitation of the research field and precluded a robust analysis of the direct consequences of zoochory. Here we report that the multilocus genotype at simple sequence repeat (SSR; microsatellite) loci of the woody endocarp, a tissue of maternal origin, provides an unequivocal genetic fingerprint of the source tree. By comparing the endocarp genotype against the complete set of genotypes of reproductive trees in the population, we could unambiguously identify the source tree for 82.1% of the seeds collected in seed traps and hypothesize that the remaining 17.9% of sampled seeds come from other populations. Identification of the source tree for Prunus mahaleb seeds dispersed by frugivores revealed a marked heterogeneity in the genetic composition of the seed rain in different microhabitats, with a range of 1-5 distinct maternal trees contributing seeds to a particular landscape patch. Within-population dispersal distances ranged between 0 and 316 m, with up to 62% of the seeds delivered within 15 m of the source trees. Long distance dispersal events, detected by the exclusion of all reproductive trees in the population, accounted for up to 17.9% of the seeds sampled. Our results indicate strong distance limitation of seed delivery combined with infrequent long-distance dispersal events, extreme heterogeneity in the landscape pattern of genetic makeup, and a marked mosaic of multiple parentage for the seeds delivered to a particular patch.

Long-term studies of vegetation dynamics

By integrating a wide range of experimental, comparative, and theoretical approaches, ecologists are starting to gain a detailed understanding of the long-term dynamics of vegetation. We explore how patterns of variation in demographic traits among species have provided insight into the processes that structure plant communities. We find a common set of mechanisms, derived from ecological and evolutionary principles, that underlie the main forces shaping systems as diverse as annual plant communities and tropical forests. Trait variation between species maintains diversity and has important implications for ecosystem processes. Hence, greater understanding of how Earth's vegetation functions will likely require integration of ecosystem science with ideas from plant evolutionary, population, and community ecology.

Spatial patterns in the distribution of tropical tree species

Fully mapped tree census plots of large area, 25 to 52 hectares, have now been completed at six different sites in tropical forests, including dry deciduous to wet evergreen forest on two continents. One of the main goals of these plots has been to evaluate spatial patterns in tropical tree populations. Here the degree of aggregation in the distribution of 1768 tree species is examined based on the average density of conspecific trees in circular neighborhoods around each tree. When all individuals larger than 1 centimeter in stem diameter were included, nearly every species was more aggregated than a random distribution. Considering only larger trees (>/= 10 centimeters in diameter), the pattern persisted, with most species being more aggregated than random. Rare species were more aggregated than common species. All six forests were very similar in all the particulars of these results.