Dynamic Complex-to-Complex Transformations of Heterobimetallic Systems Influence the Cage Structure or Spin State of Iron(II) Ions

Two new heterobimetallic cages, a trigonal‐bipyramidal and a cubic one, were assembled from the same mononuclear metalloligand by adopting the molecular library approach, using iron(II) and palladium(II) building blocks. The ligand system was designed to readily assemble through subcomponent self‐assembly. It allowed the introduction of steric strain at the iron(II) centres, which stabilizes its paramagnetic high‐spin state. This steric strain was utilized to drive dynamic complex‐to‐complex transformations with both the metalloligand and heterobimetallic cages. Addition of sterically less crowded subcomponents as a chemical stimulus transformed all complexes to their previously reported low‐spin analogues. The metalloligand and bipyramid incorporated the new building block more readily than the cubic cage, probably because the geometric structure of the sterically crowded metalloligand favours the cube formation. Furthermore it was possible to provoke structural transformations upon addition of more favourable chelating ligands, converting the cubic structures into bipyramidal ones.

Assembling Pentatopic Terpyridine Ligands with Three Types of Coordination Moieties into a Giant Supramolecular Hexagonal Prism: Synthesis, Self-Assembly, Characterization, and Antimicrobial Study

Three dimensional (3D) supramolecules with giant cavities are attractive due to their wide range of applications. Herein, we used pentatopic terpyridine ligands with three types of coordination moieties to assemble two giant supramolecular hexagonal prisms with a molecular weight up to 42 608 and 43 569 Da, respectively. Within the prisms, two double-rimmed Kandinsky Circles serve as the base surfaces as well as the templates for assisting the self-sorting during the self-assembly. Additionally, hierarchical self-assembly of these supramolecular prisms into tubular-like nanostructures was fully studied by scanning tunneling microscopy (STM) and small-angle X-ray scattering (SAXS). Finally, these supramolecular prisms show good antimicrobial activities against Gram-positive pathogen methicillin-resistant Staphylococcus aureus (MRSA) and Bacillus subtilis (B. subtilis).

Mechanochemistry of supramolecules

The urge to use alternative energy sources has gained significant attention in the eye of chemists in recent years. Solution-based traditional syntheses are extremely useful, although they are often associated with certain disadvantages like generation of waste as by-products, use of large quantities of solvents which causes environmental hazard, etc. Contrastingly, achieving syntheses through mechanochemical methods are generally time-saving, environmentally friendly and more economical. This review is written to shed some light on supramolecular chemistry and the synthesis of various supramolecules through mechanochemistry.

Indole Pulse Signalling Regulates the Cytoplasmic pH of E. coli in a Memory-Like Manner

Bacterial cells are critically dependent upon pH regulation. Here we demonstrate that indole plays a critical role in the regulation of the cytoplasmic pH of Escherichia coli. Indole is an aromatic molecule with diverse signalling roles. Two modes of indole signalling have been described: persistent and pulse signalling. The latter is illustrated by the brief but intense elevation of intracellular indole during stationary phase entry. We show that under conditions permitting indole production, cells maintain their cytoplasmic pH at 7.2. In contrast, under conditions where no indole is produced, the cytoplasmic pH is near 7.8. We demonstrate that pH regulation results from pulse, rather than persistent, indole signalling. Furthermore, we illustrate that the relevant property of indole in this context is its ability to conduct protons across the cytoplasmic membrane. Additionally, we show that the effect of the indole pulse that occurs normally during stationary phase entry in rich medium remains as a "memory" to maintain the cytoplasmic pH until entry into the next stationary phase. The indole-mediated reduction in cytoplasmic pH may explain why indole provides E. coli with a degree of protection against stresses, including some bactericidal antibiotics.

Porphyrin Boxes

In order to fabricate efficient molecular photonic devices, it has been a long-held aspiration for chemists to understand and mimic natural light-harvesting complexes where a rapid and efficient transfer of excitation energy between chlorophyll pigments is observed. Synthetic porphyrins are attractive building blocks in this regard because of their rigid and planar geometry, high thermal and electronic stability, high molar extinction, small and tunable band gap, and tweakable optical as well as redox behavior. Owing to these fascinating properties, various types of porphyrin-based architectures have been reported utilizing both covalent and noncovalent approaches. However, it still remains a challenge to construct chemically robust, well-defined three-dimensional porphyrin cages which can be easily synthesized and yet suitable for useful applications both in solution as well as in solid state. Working on this idea, we recently synthesized box-shaped organic cages, which we called porphyrin boxes, by making use of dynamic covalent chemistry of imine condensation reaction between 4-connecting, square-shaped, tetraformylporphyrin and 3-connecting, triangular-shaped, triamine molecules. Various presynthetic, as well as postsynthetic modifications, can be carried out on porphyrin boxes including a variation of the alkyl chain length in their 3-connecting subunit, chemical functionalization, and metalation of the porphyrin core. This can remarkably tune their inherent properties, e.g., solubility, window size, volume, and polarity of the internal void. The porphyrin boxes can therefore be considered as a significant addition to the family of multiporphyrin-based architectures, and because of their chemical stability and shape persistency, the applications of porphyrin boxes expand beyond the photophysical properties of an artificial light-harvesting complex. Consequently, they have been exploited as porous organic cages, where their gas adsorption properties have been investigated. By incorporating them in a lipid bilayer membrane, an iodide selective synthetic ion channel has also been demonstrated. Further, we have explored electrocatalytic reduction of carbon dioxide using Fe(III) metalated porphyrin boxes. Additionally, the precise size and ease of metalation of porphyrin boxes allowed us to utilize them as premade building blocks for creating coordination-based hierarchical superstructures. Considering these developments, it may be worth combining the photophysical properties of porphyrin with the shape-persistent porous nature of porphyrin boxes to explore other novel applications. This Account summarizes our recent work on porphyrin boxes, starting with their design, structural features, and applications in different fields. We also try to provide scientific insight into the future opportunities that these amazing boxes have in store for exploring the still uncharted challenging domains in the field of supramolecular chemistry in a confined space.

Functional Capsules via Subcomponent Self-Assembly

Coordination-driven self-assembly can produce large, symmetrical, hollow cages that are synthetically easy to access. The functions provided by these aesthetically attractive structures provide a driving force for their development, enabling practical applications. For instance, cages have provided new methods of molecular recognition, chirality sensing, separations, stabilization of reactive species, and catalysis. We have fruitfully employed subcomponent self-assembly to prepare metal-organic capsules from simple building blocks via the simultaneous formation of dynamic coordinative (N→metal) and covalent (N═C) bonds. Design strategies employ multidentate pyridyl-imine ligands to define either the edges or the faces of polyhedral structures. Octahedral metal ions, such as Fe^II, Co^II, Ni^II, Zn^II, and Cd^II, constitute the vertices. The generality of this technique has enabled the preparation of capsules with diverse three-dimensional structures. This Account highlights how fundamental investigations into the host-guest chemistry of capsules prepared through subcomponent self-assembly have led to the design of useful functions and new applications. We start by discussing simple host-guest systems involving a single capsule and continue to systems that include multiple capsules and guests, whose interactions give rise to complex functional behavior. Many of the capsules presented herein bind varied neutral guests, including aromatic or aliphatic molecules, biomolecules, and fullerenes. Binding selectivity is influenced by solvent effects, weak non-covalent interactions between hosts and guests, and the size, shape, flexibility, and degree of surface enclosure of the inner spaces of the capsules. Some hosts are able to adaptively rearrange structurally or express a different ratio of cage diastereomers to optimize the guest binding ability of the system. In other cases the bound guest can be either protected from degradation or catalytically transformed through encapsulation. Other capsules bind anions, most often in organic solvents and occasionally in water. Complexation is usually driven by a combination of electrostatic interactions, hydrogen bonding, and coordination to additional metal centers. Anion binding can also induce cage diastereomeric reconfiguration in a similar manner to some neutral guests, illustrating the general ability of subcomponent self-assembled capsules to respond to stimuli due to their dynamic nature. Capsules have been developed as supramolecular extractants for the selective removal of anions from water and as channels for transporting anions through planar lipid bilayers and into vesicles. Different capsules may work together, allowing for functions more complex than those achievable within single host-guest systems. Incorporation of stimuli-responsive capsules into multicage systems allows individual capsules within the network to be addressed and may allow signals to be passed between network members. We first present strategies to achieve selective guest binding and controlled guest release using mixtures of capsules with varied affinities for guests and different stabilities toward external stimuli. We then discuss strategies to separate capsules with encapsulated cargos via selective phase transfer, where the solvent affinities of capsules change as a result of anion exchange or post-assembly modification. The knowledge gained from these multicage systems may lead to the design of synthetic systems that can perform complex tasks in biomimetic fashion, paving the way for new supramolecular technologies to address practical problems.

Supramolecular Kandinsky circles with high antibacterial activity

Nested concentric structures widely exist in nature and designed systems with circles, polygons, polyhedra, and spheres sharing the same center or axis. It still remains challenging to construct discrete nested architecture at (supra)molecular level. Herein, three generations (G2−G4) of giant nested supramolecules, or Kandinsky circles, have been designed and assembled with molecular weight 17,964, 27,713 and 38,352 Da, respectively. In the ligand preparation, consecutive condensation between precursors with primary amines and pyrylium salts is applied to modularize the synthesis. These discrete nested supramolecules are prone to assemble into tubular nanostructures through hierarchical self-assembly. Furthermore, nested supramolecules display high antimicrobial activity against Gram-positive pathogen methicillin-resistant Staphylococcus aureus (MRSA), and negligible toxicity to eukaryotic cells, while the corresponding ligands do not show potent antimicrobial activity.

Nested structures are common throughout nature and art, yet remain challenging synthetic targets in supramolecular chemistry. Here, the authors design multitopic terpyridine ligands that coordinate into nested concentric hexagons, and show that these discrete supramolecules display potent antimicrobial activity.

A halogen bond-mediated highly active artificial chloride channel with high anticancer activity

Chloride-selective transmembrane carriers or channels might have possible uses in treating channelopathies or cancers. While chloride carriers have been extensively investigated, the corresponding chloride channels have remained limitedly studied. Moreover, all hitherto reported channel systems lack clearly definable and readily modifiable positions in their structures for the reliable construction and combinatorial optimization of their ion transport properties. As a result, the existing channels are limited by their large molecular weight, weak activity or low anion selectivity. In this report, we describe a readily accessible and robust monopeptide-based scaffold for the reliable construction of halogen bond-mediated artificial anion channels via directional assembly of electron-deficient iodine atoms, which create a transmembrane pathway for facilitating anion transport. The high intrinsic modularity of the backbone of the scaffold, which enables the rapid and combinatorial optimization of the transport activity and selectivity of channels, effectively delivers a highly active chloride channel A10. Such high activity in chloride transport subsequently leads to an excellent IC50 value of 20 μM toward inhibiting the growth of human breast cancer cells (BT-474), an anticancer activity that is even higher than that of the well-known anticancer agent cisplatin.