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For: Huang TK, Puchta H. CRISPR/Cas-mediated gene targeting in plants: finally a turn for the better for homologous recombination. Plant Cell Rep 2019;38:443-453. [PMID: 30673818 DOI: 10.1007/s00299-019-02379-0] [Citation(s) in RCA: 82] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2018] [Accepted: 01/09/2019] [Indexed: 05/22/2023]
Number Cited by Other Article(s)
51
Schubert I. Boon and Bane of DNA Double-Strand Breaks. Int J Mol Sci 2021;22:ijms22105171. [PMID: 34068283 PMCID: PMC8153287 DOI: 10.3390/ijms22105171] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 05/11/2021] [Accepted: 05/11/2021] [Indexed: 11/18/2022]  Open
52
Guyon‐Debast A, Alboresi A, Terret Z, Charlot F, Berthier F, Vendrell‐Mir P, Casacuberta JM, Veillet F, Morosinotto T, Gallois J, Nogué F. A blueprint for gene function analysis through Base Editing in the model plant Physcomitrium (Physcomitrella) patens. THE NEW PHYTOLOGIST 2021;230:1258-1272. [PMID: 33421132 PMCID: PMC8048939 DOI: 10.1111/nph.17171] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Accepted: 12/21/2020] [Indexed: 05/14/2023]
53
Eid A, Mohan C, Sanchez S, Wang D, Altpeter F. Multiallelic, Targeted Mutagenesis of Magnesium Chelatase With CRISPR/Cas9 Provides a Rapidly Scorable Phenotype in Highly Polyploid Sugarcane. Front Genome Ed 2021;3:654996. [PMID: 34713257 PMCID: PMC8525377 DOI: 10.3389/fgeed.2021.654996] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2021] [Accepted: 03/15/2021] [Indexed: 12/12/2022]  Open
54
Zhao Y, Karan R, Altpeter F. Error-free recombination in sugarcane mediated by only 30 nucleotides of homology and CRISPR/Cas9 induced DNA breaks or Cre-recombinase. Biotechnol J 2021;16:e2000650. [PMID: 33710783 DOI: 10.1002/biot.202000650] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 02/15/2021] [Accepted: 03/03/2021] [Indexed: 01/03/2023]
55
Haddad CO, Kalt I, Shovman Y, Xia L, Schlesinger Y, Sarid R, Parnas O. Targeting the Kaposi's sarcoma-associated herpesvirus genome with the CRISPR-Cas9 platform in latently infected cells. Virol J 2021;18:56. [PMID: 33731154 PMCID: PMC7966637 DOI: 10.1186/s12985-021-01527-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Accepted: 03/04/2021] [Indexed: 12/18/2022]  Open
56
Capdeville N, Merker L, Schindele P, Puchta H. Sophisticated CRISPR/Cas tools for fine-tuning plant performance. JOURNAL OF PLANT PHYSIOLOGY 2021;257:153332. [PMID: 33383400 DOI: 10.1016/j.jplph.2020.153332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 12/02/2020] [Accepted: 12/03/2020] [Indexed: 05/03/2023]
57
Eid A, Mohan C, Sanchez S, Wang D, Altpeter F. Multiallelic, Targeted Mutagenesis of Magnesium Chelatase With CRISPR/Cas9 Provides a Rapidly Scorable Phenotype in Highly Polyploid Sugarcane. Front Genome Ed 2021. [PMID: 34713257 DOI: 10.3389/fgeed.2021.65499] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]  Open
58
Merker L, Schindele P, Huang T, Wolter F, Puchta H. Enhancing in planta gene targeting efficiencies in Arabidopsis using temperature-tolerant CRISPR/LbCas12a. PLANT BIOTECHNOLOGY JOURNAL 2020;18:2382-2384. [PMID: 32473055 PMCID: PMC7680533 DOI: 10.1111/pbi.13426] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Revised: 05/20/2020] [Accepted: 05/22/2020] [Indexed: 05/03/2023]
59
Schwartz C, Lenderts B, Feigenbutz L, Barone P, Llaca V, Fengler K, Svitashev S. CRISPR-Cas9-mediated 75.5-Mb inversion in maize. NATURE PLANTS 2020;6:1427-1431. [PMID: 33299151 DOI: 10.1038/s41477-020-00817-6] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Accepted: 11/04/2020] [Indexed: 05/11/2023]
60
Applications of CRISPR-Cas in agriculture and plant biotechnology. Nat Rev Mol Cell Biol 2020;21:661-677. [PMID: 32973356 DOI: 10.1038/s41580-020-00288-9] [Citation(s) in RCA: 306] [Impact Index Per Article: 76.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/11/2020] [Indexed: 12/26/2022]
61
Veillet F, Durand M, Kroj T, Cesari S, Gallois JL. Precision Breeding Made Real with CRISPR: Illustration through Genetic Resistance to Pathogens. PLANT COMMUNICATIONS 2020;1:100102. [PMID: 33367260 PMCID: PMC7747970 DOI: 10.1016/j.xplc.2020.100102] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 07/21/2020] [Accepted: 07/23/2020] [Indexed: 05/10/2023]
62
Merker L, Schindele P, Puchta H. Using CRISPR/ttLbCas12a for in planta Gene Targeting in A. thaliana. ACTA ACUST UNITED AC 2020;5:e20117. [PMID: 32865887 DOI: 10.1002/cppb.20117] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
63
Barone P, Wu E, Lenderts B, Anand A, Gordon-Kamm W, Svitashev S, Kumar S. Efficient Gene Targeting in Maize Using Inducible CRISPR-Cas9 and Marker-free Donor Template. MOLECULAR PLANT 2020;13:1219-1227. [PMID: 32574856 DOI: 10.1016/j.molp.2020.06.008] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 06/11/2020] [Accepted: 06/18/2020] [Indexed: 05/26/2023]
64
Veillet F, Kermarrec M, Chauvin L, Guyon-debast A, Chauvin J, Gallois J, Nogué F. Prime editing is achievable in the tetraploid potato, but needs improvement.. [PMID: 0 DOI: 10.1101/2020.06.18.159111] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
65
Steinwand MA, Ronald PC. Crop biotechnology and the future of food. ACTA ACUST UNITED AC 2020. [DOI: 10.1038/s43016-020-0072-3] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
66
Base Editing: The Ever Expanding Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) Tool Kit for Precise Genome Editing in Plants. Genes (Basel) 2020;11:genes11040466. [PMID: 32344599 PMCID: PMC7231171 DOI: 10.3390/genes11040466] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 04/21/2020] [Accepted: 04/21/2020] [Indexed: 12/26/2022]  Open
67
Single-nucleotide editing for zebra3 and wsl5 phenotypes in rice using CRISPR/Cas9-mediated adenine base editors. ABIOTECH 2020;1:106-118. [PMID: 36304716 PMCID: PMC9590491 DOI: 10.1007/s42994-020-00018-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 03/04/2020] [Indexed: 12/21/2022]
68
Capdeville N, Schindele P, Puchta H. Application of CRISPR/Cas-mediated base editing for directed protein evolution in plants. SCIENCE CHINA-LIFE SCIENCES 2020;63:613-616. [DOI: 10.1007/s11427-020-1655-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Accepted: 02/21/2020] [Indexed: 02/04/2023]
69
Zlobin NE, Lebedeva MV, Taranov VV. CRISPR/Cas9 genome editing through in planta transformation. Crit Rev Biotechnol 2020;40:153-168. [PMID: 31903793 DOI: 10.1080/07388551.2019.1709795] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
70
Zhu Y, Wagner D. Plant Inflorescence Architecture: The Formation, Activity, and Fate of Axillary Meristems. Cold Spring Harb Perspect Biol 2020;12:cshperspect.a034652. [PMID: 31308142 DOI: 10.1101/cshperspect.a034652] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
71
Schmidt C, Schindele P, Puchta H. From gene editing to genome engineering: restructuring plant chromosomes via CRISPR/Cas. ABIOTECH 2020;1:21-31. [PMID: 36305002 PMCID: PMC9584095 DOI: 10.1007/s42994-019-00002-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/03/2019] [Indexed: 01/16/2023]
72
Zhang Y, Showalter AM. CRISPR/Cas9 Genome Editing Technology: A Valuable Tool for Understanding Plant Cell Wall Biosynthesis and Function. FRONTIERS IN PLANT SCIENCE 2020;11:589517. [PMID: 33329650 PMCID: PMC7714752 DOI: 10.3389/fpls.2020.589517] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Accepted: 10/23/2020] [Indexed: 05/05/2023]
73
Banakar R, Eggenberger AL, Lee K, Wright DA, Murugan K, Zarecor S, Lawrence-Dill CJ, Sashital DG, Wang K. High-frequency random DNA insertions upon co-delivery of CRISPR-Cas9 ribonucleoprotein and selectable marker plasmid in rice. Sci Rep 2019;9:19902. [PMID: 31882637 PMCID: PMC6934568 DOI: 10.1038/s41598-019-55681-y] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 12/02/2019] [Indexed: 12/28/2022]  Open
74
DNA Helicases as Safekeepers of Genome Stability in Plants. Genes (Basel) 2019;10:genes10121028. [PMID: 31835565 PMCID: PMC6947026 DOI: 10.3390/genes10121028] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2019] [Revised: 12/05/2019] [Accepted: 12/07/2019] [Indexed: 02/07/2023]  Open
75
Wolter F, Puchta H. In planta gene targeting can be enhanced by the use of CRISPR/Cas12a. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019;100:1083-1094. [PMID: 31381206 DOI: 10.1111/tpj.14488] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2019] [Revised: 07/08/2019] [Accepted: 07/29/2019] [Indexed: 05/20/2023]
76
Bouain N, Korte A, Satbhai SB, Nam HI, Rhee SY, Busch W, Rouached H. Systems genomics approaches provide new insights into Arabidopsis thaliana root growth regulation under combinatorial mineral nutrient limitation. PLoS Genet 2019;15:e1008392. [PMID: 31693663 PMCID: PMC6834251 DOI: 10.1371/journal.pgen.1008392] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Accepted: 08/29/2019] [Indexed: 01/08/2023]  Open
77
Barrett LG, Legros M, Kumaran N, Glassop D, Raghu S, Gardiner DM. Gene drives in plants: opportunities and challenges for weed control and engineered resilience. Proc Biol Sci 2019;286:20191515. [PMID: 31551052 PMCID: PMC6784734 DOI: 10.1098/rspb.2019.1515] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Accepted: 09/06/2019] [Indexed: 02/07/2023]  Open
78
Schindele A, Dorn A, Puchta H. CRISPR/Cas brings plant biology and breeding into the fast lane. Curr Opin Biotechnol 2019;61:7-14. [PMID: 31557657 DOI: 10.1016/j.copbio.2019.08.006] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 08/14/2019] [Accepted: 08/19/2019] [Indexed: 12/18/2022]
79
Martin SL, Parent JS, Laforest M, Page E, Kreiner JM, James T. Population Genomic Approaches for Weed Science. PLANTS (BASEL, SWITZERLAND) 2019;8:E354. [PMID: 31546893 PMCID: PMC6783936 DOI: 10.3390/plants8090354] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 09/12/2019] [Accepted: 09/14/2019] [Indexed: 12/16/2022]
80
Zhang Y, Malzahn AA, Sretenovic S, Qi Y. The emerging and uncultivated potential of CRISPR technology in plant science. NATURE PLANTS 2019;5:778-794. [PMID: 31308503 DOI: 10.1038/s41477-019-0461-5] [Citation(s) in RCA: 207] [Impact Index Per Article: 41.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2019] [Accepted: 05/24/2019] [Indexed: 05/18/2023]
81
Bruegmann T, Deecke K, Fladung M. Evaluating the Efficiency of gRNAs in CRISPR/Cas9 Mediated Genome Editing in Poplars. Int J Mol Sci 2019;20:E3623. [PMID: 31344908 PMCID: PMC6696231 DOI: 10.3390/ijms20153623] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 07/12/2019] [Accepted: 07/21/2019] [Indexed: 01/23/2023]  Open
82
Rozov SM, Permyakova NV, Deineko EV. The Problem of the Low Rates of CRISPR/Cas9-Mediated Knock-ins in Plants: Approaches and Solutions. Int J Mol Sci 2019;20:E3371. [PMID: 31323994 PMCID: PMC6651222 DOI: 10.3390/ijms20133371] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Revised: 06/28/2019] [Accepted: 07/05/2019] [Indexed: 11/16/2022]  Open
83
Hahne G, Tomlinson L, Nogué F. Precision genetic engineering tools for next-generation plant breeding. PLANT CELL REPORTS 2019;38:435-436. [PMID: 30923962 DOI: 10.1007/s00299-019-02400-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Accepted: 03/05/2019] [Indexed: 05/17/2023]
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