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On fluctuating characteristics of global COVID-19 cases and identification of inflection points. LIBRARY HI TECH 2021. [DOI: 10.1108/lht-10-2020-0263] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
PurposeThe emergence of a coronavirus disease 2019 (COVID-19) epidemic has had a tremendous impact on the world, and the characteristics of its evolution need to be better understood.Design/methodology/approachTo explore the changes of cases and control them effectively, this paper analyzes and models the fluctuation and dynamic characteristics of the daily growth rate based on the data of newly confirmed cases around the world. Based on the data, the authors identify the inflection points and analyze the causes of the new daily confirmed cases and deaths worldwide.FindingsThe study found that the growth sequence of the number of new confirmed COVID-19 cases per day has a significant cluster of fluctuations. The impact of previous fluctuations in the future is gradually attenuated and shows a relatively gentle long-term downward trend. There are four inflection points in the global time series of new confirmed cases and the number of deaths per day. And these inflection points show the state of an accelerated rise, a slowdown in the rate of decline, a slowdown in the rate of growth and an accelerated decline in turn.Originality/valueThis paper has a certain guiding and innovative significance for the dynamic research of COVID-19 cases in the world.
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ArunKumar KE, Kalaga DV, Kumar CMS, Kawaji M, Brenza TM. Forecasting of COVID-19 using deep layer Recurrent Neural Networks (RNNs) with Gated Recurrent Units (GRUs) and Long Short-Term Memory (LSTM) cells. CHAOS, SOLITONS, AND FRACTALS 2021; 146:110861. [PMID: 33746373 PMCID: PMC7955925 DOI: 10.1016/j.chaos.2021.110861] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Revised: 02/24/2021] [Accepted: 03/08/2021] [Indexed: 05/18/2023]
Abstract
In December 2019, first case of the COVID-19 was reported in Wuhan, Hubei province in China. Soon world health organization has declared contagious coronavirus disease (a.k.a. COVID-19) as a global pandemic in the month of March 2020. Over the span of eleven months, it has rapidly spread out all over the world with total confirmed cases of ~ 41.39 M and causing a total fatality of ~1.13 M. At present, the entire mankind is facing serious threat and it is believed that COVID-19 may have been around for quite some time. Therefore, it has become imperative to forecast the global impact of COVID-19 in the near future. The present work proposes state-of-art deep learning Recurrent Neural Networks (RNN) models to predict the country-wise cumulative confirmed cases, cumulative recovered cases and the cumulative fatalities. The Gated Recurrent Units (GRUs) and Long Short-Term Memory (LSTM) cells along with Recurrent Neural Networks (RNN) were developed to predict the future trends of the COVID-19. We have used publicly available data from John Hopkins University's COVID-19 database. In this work, we emphasize the importance of various factors such as age, preventive measures, and healthcare facilities, population density, etc. that play vital role in rapid spread of COVID-19 pandemic. Therefore, our forecasted results are very helpful for countries to better prepare themselves to control the pandemic.
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Affiliation(s)
- K E ArunKumar
- Department of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, SD 57701, United States
| | - Dinesh V Kalaga
- Mechanical Engineering Department, City College of New York, New York, NY 10031, United States
| | - Ch Mohan Sai Kumar
- Process Chemistry and Technology, CSIR- Central Institute of Medicinal and Aromatic Plants, Lucknow, UP 226015, India
| | - Masahiro Kawaji
- Mechanical Engineering Department, City College of New York, New York, NY 10031, United States
| | - Timothy M Brenza
- Department of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, SD 57701, United States
- Biomedical Engineering program, South Dakota School of Mines and Technology, Rapid City, SD 57701, United States
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Elsheikh AH, Saba AI, Elaziz MA, Lu S, Shanmugan S, Muthuramalingam T, Kumar R, Mosleh AO, Essa FA, Shehabeldeen TA. Deep learning-based forecasting model for COVID-19 outbreak in Saudi Arabia. PROCESS SAFETY AND ENVIRONMENTAL PROTECTION : TRANSACTIONS OF THE INSTITUTION OF CHEMICAL ENGINEERS, PART B 2021; 149:223-233. [PMID: 33162687 PMCID: PMC7604086 DOI: 10.1016/j.psep.2020.10.048] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Revised: 10/22/2020] [Accepted: 10/23/2020] [Indexed: 05/02/2023]
Abstract
COVID-19 outbreak has become a global pandemic that affected more than 200 countries. Predicting the epidemiological behavior of this outbreak has a vital role to prevent its spreading. In this study, long short-term memory (LSTM) network as a robust deep learning model is proposed to forecast the number of total confirmed cases, total recovered cases, and total deaths in Saudi Arabia. The model was trained using the official reported data. The optimal values of the model's parameters that maximize the forecasting accuracy were determined. The forecasting accuracy of the model was assessed using seven statistical assessment criteria, namely, root mean square error (RMSE), coefficient of determination (R2), mean absolute error (MAE), efficiency coefficient (EC), overall index (OI), coefficient of variation (COV), and coefficient of residual mass (CRM). A reasonable forecasting accuracy was obtained. The forecasting accuracy of the suggested model is compared with two other models. The first is a statistical based model called autoregressive integrated moving average (ARIMA). The second is an artificial intelligence based model called nonlinear autoregressive artificial neural networks (NARANN). Finally, the proposed LSTM model was applied to forecast the total number of confirmed cases as well as deaths in six different countries; Brazil, India, Saudi Arabia, South Africa, Spain, and USA. These countries have different epidemic trends as they apply different polices and have different age structure, weather, and culture. The social distancing and protection measures applied in different countries are assumed to be maintained during the forecasting period. The obtained results may help policymakers to control the disease and to put strategic plans to organize Hajj and the closure periods of the schools and universities.
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Affiliation(s)
- Ammar H Elsheikh
- Department of Production Engineering and Mechanical Design, Faculty of Engineering, Tanta University, Tanta, 31527, Egypt
| | - Amal I Saba
- Department of Histology, Faculty of Medicine, Tanta University, Tanta, 31527, Egypt
| | - Mohamed Abd Elaziz
- Department of Mathematics, Faculty of Science, Zagazig University, Zagazig, Egypt
| | - Songfeng Lu
- School of Computer Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - S Shanmugan
- Research Centre for Solar Energy, Department of Physics, Koneru Lakshmaiah Education Foundation, Green Fields, Guntur District, Vaddeswaram, Andhra Pradesh, 522502, India
| | - T Muthuramalingam
- Department of Mechatronics Engineering, Kattankulathur Campus, SRM Institute of Science and Technology, Chennai, 603203, India
| | - Ravinder Kumar
- Department of Mechanical Engineering, Lovely Professional University, Phagwara, Jalandhar, 144411, Punjab, India
| | - Ahmed O Mosleh
- Shoubra Faculty of Engineering, Benha University, Shoubra St. 108, Shoubra, P.O. 11629, Cairo, Egypt
| | - F A Essa
- Mechanical Engineering Department, Faculty of Engineering, Kafrelsheikh University, Kafrelsheikh, 33516, Egypt
| | - Taher A Shehabeldeen
- Mechanical Engineering Department, Faculty of Engineering, Kafrelsheikh University, Kafrelsheikh, 33516, Egypt
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ArunKumar KE, Kalaga DV, Sai Kumar CM, Chilkoor G, Kawaji M, Brenza TM. Forecasting the dynamics of cumulative COVID-19 cases (confirmed, recovered and deaths) for top-16 countries using statistical machine learning models: Auto-Regressive Integrated Moving Average (ARIMA) and Seasonal Auto-Regressive Integrated Moving Average (SARIMA). Appl Soft Comput 2021; 103:107161. [PMID: 33584158 PMCID: PMC7869631 DOI: 10.1016/j.asoc.2021.107161] [Citation(s) in RCA: 60] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 01/08/2021] [Accepted: 01/28/2021] [Indexed: 12/22/2022]
Abstract
Most countries are reopening or considering lifting the stringent prevention policies such as lockdowns, consequently, daily coronavirus disease (COVID-19) cases (confirmed, recovered and deaths) are increasing significantly. As of July 25th, there are 16.5 million global cumulative confirmed cases, 9.4 million cumulative recovered cases and 0.65 million deaths. There is a tremendous necessity of supervising and estimating future COVID-19 cases to control the spread and help countries prepare their healthcare systems. In this study, time-series models - Auto-Regressive Integrated Moving Average (ARIMA) and Seasonal Auto-Regressive Integrated Moving Average (SARIMA) are used to forecast the epidemiological trends of the COVID-19 pandemic for top-16 countries where 70%-80% of global cumulative cases are located. Initial combinations of the model parameters were selected using the auto-ARIMA model followed by finding the optimized model parameters based on the best fit between the predictions and test data. Analytical tools Auto-Correlation function (ACF), Partial Auto-Correlation Function (PACF), Akaike Information Criterion (AIC) and Bayesian Information Criterion (BIC) were used to assess the reliability of the models. Evaluation metrics Mean Absolute Error (MAE), Mean Square Error (MSE), Root Mean Square Error (RMSE) and Mean Absolute Percent Error (MAPE) were used as criteria for selecting the best model. A case study was presented where the statistical methodology was discussed in detail for model selection and the procedure for forecasting the COVID-19 cases of the USA. Best model parameters of ARIMA and SARIMA for each country are selected manually and the optimized parameters are then used to forecast the COVID-19 cases. Forecasted trends for confirmed and recovered cases showed an exponential rise for countries such as the United States, Brazil, South Africa, Colombia, Bangladesh, India, Mexico and Pakistan. Similarly, trends for cumulative deaths showed an exponential rise for countries Brazil, South Africa, Chile, Colombia, Bangladesh, India, Mexico, Iran, Peru, and Russia. SARIMA model predictions are more realistic than that of the ARIMA model predictions confirming the existence of seasonality in COVID-19 data. The results of this study not only shed light on the future trends of the COVID-19 outbreak in top-16 countries but also guide these countries to prepare their health care policies for the ongoing pandemic. The data used in this work is obtained from publicly available John Hopkins University's COVID-19 database.
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Affiliation(s)
- K E ArunKumar
- Department of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, SD 57701, USA
| | - Dinesh V Kalaga
- Mechanical Engineering Department, City College of New York, New York, NY 10031, USA
| | - Ch Mohan Sai Kumar
- Process Chemistry and Technology, CSIR-Central Institute of Medicinal and Aromatic Plants, Lucknow, UP, 226015, India
| | - Govinda Chilkoor
- Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology, Rapid City, SD, 57701, USA
| | - Masahiro Kawaji
- Mechanical Engineering Department, City College of New York, New York, NY 10031, USA
| | - Timothy M Brenza
- Department of Chemical and Biological Engineering, South Dakota School of Mines and Technology, Rapid City, SD 57701, USA
- Biomedical Engineering program, South Dakota School of Mines and Technology, Rapid City, SD 57701, USA
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Musulin J, Baressi Šegota S, Štifanić D, Lorencin I, Anđelić N, Šušteršič T, Blagojević A, Filipović N, Ćabov T, Markova-Car E. Application of Artificial Intelligence-Based Regression Methods in the Problem of COVID-19 Spread Prediction: A Systematic Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:4287. [PMID: 33919496 PMCID: PMC8073788 DOI: 10.3390/ijerph18084287] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 04/14/2021] [Accepted: 04/16/2021] [Indexed: 02/07/2023]
Abstract
COVID-19 is one of the greatest challenges humanity has faced recently, forcing a change in the daily lives of billions of people worldwide. Therefore, many efforts have been made by researchers across the globe in the attempt of determining the models of COVID-19 spread. The objectives of this review are to analyze some of the open-access datasets mostly used in research in the field of COVID-19 regression modeling as well as present current literature based on Artificial Intelligence (AI) methods for regression tasks, like disease spread. Moreover, we discuss the applicability of Machine Learning (ML) and Evolutionary Computing (EC) methods that have focused on regressing epidemiology curves of COVID-19, and provide an overview of the usefulness of existing models in specific areas. An electronic literature search of the various databases was conducted to develop a comprehensive review of the latest AI-based approaches for modeling the spread of COVID-19. Finally, a conclusion is drawn from the observation of reviewed papers that AI-based algorithms have a clear application in COVID-19 epidemiological spread modeling and may be a crucial tool in the combat against coming pandemics.
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Affiliation(s)
- Jelena Musulin
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (J.M.); (D.Š.); (I.L.); (N.A.)
| | - Sandi Baressi Šegota
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (J.M.); (D.Š.); (I.L.); (N.A.)
| | - Daniel Štifanić
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (J.M.); (D.Š.); (I.L.); (N.A.)
| | - Ivan Lorencin
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (J.M.); (D.Š.); (I.L.); (N.A.)
| | - Nikola Anđelić
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (J.M.); (D.Š.); (I.L.); (N.A.)
| | - Tijana Šušteršič
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Anđela Blagojević
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Nenad Filipović
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Tomislav Ćabov
- Faculty of Dental Medicine, University of Rijeka, Krešimirova ul. 40, 51000 Rijeka, Croatia;
| | - Elitza Markova-Car
- Department of Biotechnology, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia;
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Shah V, Shelke A, Parab M, Shah J, Mehendale N. A statistical and deep learning-based daily infected count prediction system for the coronavirus pandemic. EVOLUTIONARY INTELLIGENCE 2021; 15:1947-1957. [PMID: 33841583 PMCID: PMC8019340 DOI: 10.1007/s12065-021-00600-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Revised: 01/23/2021] [Accepted: 03/25/2021] [Indexed: 11/17/2022]
Abstract
We present new data analytics-based predictions results that can help governments to plan their future actions and also help medical services to be better prepared for the future. Our system can predict new corona cases with 99.82% accuracy using susceptible infected recovered (SIR) model. We have predicted the results of new COVID cases per day for dense and highly populated country i.e. India. We found that traditional statistical methods will not work efficiently as they do not consider the limited population in a particular country. Using the data analytics-based curve we predicted four most likely possibilities for the number of new cases in India. Hence, we expect that the results mentioned in the manuscript help people to better understand the progress of this disease. Supplementary Information The online version contains supplementary material available at 10.1007/s12065-021-00600-2.
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Affiliation(s)
- Vruddhi Shah
- K. J. Somaiya College of Engineering, Mumbai, 400077 Maharashtra India
| | - Ankita Shelke
- K. J. Somaiya College of Engineering, Mumbai, 400077 Maharashtra India
| | - Mamata Parab
- K. J. Somaiya College of Engineering, Mumbai, 400077 Maharashtra India
| | - Jainam Shah
- K. J. Somaiya College of Engineering, Mumbai, 400077 Maharashtra India
| | - Ninad Mehendale
- K. J. Somaiya College of Engineering, Mumbai, 400077 Maharashtra India
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Gangwar HS, Ray PKC. Geographic information system-based analysis of COVID-19 cases in India during pre-lockdown, lockdown, and unlock phases. Int J Infect Dis 2021; 105:424-435. [PMID: 33610777 PMCID: PMC7891046 DOI: 10.1016/j.ijid.2021.02.070] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 02/15/2021] [Accepted: 02/16/2021] [Indexed: 12/24/2022] Open
Abstract
OBJECTIVE The World Health Organization formally announced the global COVID-19 pandemic on March 11, 2020 due to widespread infections. In this study, COVID-19 cases in India were critically analyzed during the pre-lockdown (PLD), lockdown (LD), and unlock (UL) phases. METHOD Analyses were conducted using geospatial technology at district, state, and country levels, and comparisons were also made with other countries throughout the world that had the highest infection rates. India had the third highest infection rate in the world after the USA and Brazil during UL2.0-UL3.0 phases, the second highest after the USA during UL4.0-UL5.0 phases, and the highest among South Asian Association for Regional Cooperation (SAARC) countries in PLD-UL5.0 period. RESULTS The trend in the number of COVID-19 cases was associated with the population density where higher numbers tended to be record in the eastern, southern, and west-central parts of India. The death rate in India throughout the pandemic period under study was lower than the global average. Kerala reported the maximum number of infections during PLD whereas Maharashtra had the highest numbers during all LD and UL phases. Eighty percent of the cases in India were concentrated mainly in highly populous districts. CONCLUSION The top 25 districts accounted for 70.99%, 69.38%, 54.87%, 44.23%, 40.48%, and 38.96% of the infections from the start of UL1.0 until the end of UL phases, respectively, and the top 26-50 districts accounted for 6.38%, 6.76%, 11.23%, 12.98%, 13.40%, and 13.61% of cases in these phase, thereby indicating that COVID-19 cases spread during the UL period. By October 31, 2020, Delhi had the highest number of infections, followed by Bengaluru Urban, Pune, Mumbai, Thane, and Chennai. No decline in the infection rate occurred, even in UL5.0, thereby indicating a highly alarming situation in India.
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Paiva HM, Afonso RJM, Caldeira FMSDLA, Velasquez EDA. A computational tool for trend analysis and forecast of the COVID-19 pandemic. Appl Soft Comput 2021; 105:107289. [PMID: 33723487 PMCID: PMC7944846 DOI: 10.1016/j.asoc.2021.107289] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Revised: 02/22/2021] [Accepted: 03/05/2021] [Indexed: 12/24/2022]
Abstract
Purpose: This paper proposes a methodology and a computational tool to study the COVID-19 pandemic throughout the world and to perform a trend analysis to assess its local dynamics. Methods: Mathematical functions are employed to describe the number of cases and demises in each region and to predict their final numbers, as well as the dates of maximum daily occurrences and the local stabilization date. The model parameters are calibrated using a computational methodology for numerical optimization. Trend analyses are run, allowing to assess the effects of public policies. Easy to interpret metrics over the quality of the fitted curves are provided. Country-wise data from the European Centre for Disease Prevention and Control (ECDC) concerning the daily number of cases and demises around the world are used, as well as detailed data from Johns Hopkins University and from the Brasil.io project describing individually the occurrences in United States counties and in Brazilian states and cities, respectively. U. S. and Brazil were chosen for a more detailed analysis because they are the current focus of the pandemic. Results: Illustrative results for different countries, U. S. counties and Brazilian states and cities are presented and discussed. Conclusion: The main contributions of this work lie in (i) a straightforward model of the curves to represent the data, which allows automation of the process without requiring interventions from experts; (ii) an innovative approach for trend analysis, whose results provide important information to support authorities in their decision-making process; and (iii) the developed computational tool, which is freely available and allows the user to quickly update the COVID-19 analyses and forecasts for any country, United States county or Brazilian state or city present in the periodic reports from the authorities.
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Affiliation(s)
- Henrique Mohallem Paiva
- Institute of Science and Technology (ICT), Federal University of Sao Paulo (UNIFESP), Rua Talim, 330, São José dos Campos, SP, Brazil
| | - Rubens Junqueira Magalhães Afonso
- Institute of Flight System Dynamics, Technical University of Munich (TUM), München, Bayern, 85748, Germany.,Department of Electronic Engineering, Aeronautical Institute of Technology (ITA), Praça Marechal Eduardo Gomes, 50, São José dos Campos, SP, Brazil
| | | | - Ester de Andrade Velasquez
- Institute of Science and Technology (ICT), Federal University of Sao Paulo (UNIFESP), Rua Talim, 330, São José dos Campos, SP, Brazil
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Analysis and Prediction of COVID-19 Using SIR, SEIQR, and Machine Learning Models: Australia, Italy, and UK Cases. INFORMATION 2021. [DOI: 10.3390/info12030109] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
The novel coronavirus disease, also known as COVID-19, is a disease outbreak that was first identified in Wuhan, a Central Chinese city. In this report, a short analysis focusing on Australia, Italy, and UK is conducted. The analysis includes confirmed and recovered cases and deaths, the growth rate in Australia compared with that in Italy and UK, and the trend of the disease in different Australian regions. Mathematical approaches based on susceptible, infected, and recovered (SIR) cases and susceptible, exposed, infected, quarantined, and recovered (SEIQR) cases models are proposed to predict epidemiology in the above-mentioned countries. Since the performance of the classic forms of SIR and SEIQR depends on parameter settings, some optimization algorithms, namely Broyden–Fletcher–Goldfarb–Shanno (BFGS), conjugate gradients (CG), limited memory bound constrained BFGS (L-BFGS-B), and Nelder–Mead, are proposed to optimize the parameters and the predictive capabilities of the SIR and SEIQR models. The results of the optimized SIR and SEIQR models were compared with those of two well-known machine learning algorithms, i.e., the Prophet algorithm and logistic function. The results demonstrate the different behaviors of these algorithms in different countries as well as the better performance of the improved SIR and SEIQR models. Moreover, the Prophet algorithm was found to provide better prediction performance than the logistic function, as well as better prediction performance for Italy and UK cases than for Australian cases. Therefore, it seems that the Prophet algorithm is suitable for data with an increasing trend in the context of a pandemic. Optimization of SIR and SEIQR model parameters yielded a significant improvement in the prediction accuracy of the models. Despite the availability of several algorithms for trend predictions in this pandemic, there is no single algorithm that would be optimal for all cases.
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Mohammadi F, Pourzamani H, Karimi H, Mohammadi M, Mohammadi M, Ardalan N, Khoshravesh R, Pooresmaeil H, Shahabi S, Sabahi M, Sadat Miryonesi F, Najafi M, Yavari Z, Mohammadi F, Teiri H, Jannati M. Artificial neural network and logistic regression modelling to characterize COVID-19 infected patients in local areas of Iran. Biomed J 2021; 44:304-316. [PMID: 34127421 PMCID: PMC7905378 DOI: 10.1016/j.bj.2021.02.006] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 02/11/2021] [Accepted: 02/17/2021] [Indexed: 01/08/2023] Open
Abstract
Background COVID-19 is an infectious disease that started spreading globally at the end of 2019. Due to differences in patient characteristics and symptoms in different regions, in this research, a comparative study was performed on COVID-19 patients in 6 provinces of Iran. Also, multilayer perceptron (MLP) neural network and Logistic Regression (LR) models were applied for the diagnosis of COVID-19. Methods A total of 1043 patients with suspected COVID-19 infection in Iran participated in this study. 29 characteristics, symptoms and underlying disease were obtained from hospitalized patients. Afterwards, we compared the obtained data between confirmed cases. Furthermore, the data was applied for building the ANN and LR models to diagnosis the infected patients by COVID-19. Results In 750 confirmed patients, Common symptoms were: fever (%) >37.5 °C, cough, shortness of breath, fatigue, chills and headache. The most common underlying diseases were: hypertension, diabetes, chronic obstructive pulmonary disease and coronary heart disease. Finally, the accuracy of the ANN model to the diagnosis of COVID-19 infection was higher than the LR model. Conclusion The prevalent symptoms and underlying diseases of COVID-19 patients were similar in different provinces, but the incidence of symptoms was significantly different from each other. Also, the study demonstrated that ANN and LR models have a high ability in the diagnosis of COVID-19 infection.
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Affiliation(s)
- Farzaneh Mohammadi
- Department of Environmental Health Engineering, School of Health, Isfahan University of Medical Sciences, Isfahan, Iran; Environment Research Center, Research Institute for Primordial Prevention of Non-communicable Disease, Isfahan University of Medical Sciences, Isfahan, Iran.
| | - Hamidreza Pourzamani
- Department of Environmental Health Engineering, School of Health, Isfahan University of Medical Sciences, Isfahan, Iran; Environment Research Center, Research Institute for Primordial Prevention of Non-communicable Disease, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Hossein Karimi
- Department of Environmental Health Engineering, School of Health, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Maryam Mohammadi
- Department of Management and Health Information Technology, School of Management and Medical Information Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Mohammad Mohammadi
- Department of Electrical Engineering, Shahreza University, Isfahan, Iran
| | - Nahid Ardalan
- Kurdistan University of Medical Sciences, Sanandaj, Kurdistan, Iran
| | | | | | | | | | | | - Marzieh Najafi
- Isfahan Endocrine and Metabolism Research Center, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Zeynab Yavari
- Genetic and Environmental Adventures Research Center, School of Abarkouh Paramedicine, Shahid Sadoughi University of Medical Sciences, Yazd, Iran
| | - Farideh Mohammadi
- Department of Textile Engineering, Isfahan University of Technology, Isfahan, Iran
| | - Hakimeh Teiri
- Department of Environmental Health Engineering, School of Health, Isfahan University of Medical Sciences, Isfahan, Iran; Environment Research Center, Research Institute for Primordial Prevention of Non-communicable Disease, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Mahsa Jannati
- Graduate Student, Dept. of Civil Engineering, Lakehead University, Thunder Bay, ON, Canada
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Rahimi I, Chen F, Gandomi AH. A review on COVID-19 forecasting models. Neural Comput Appl 2021; 35:1-11. [PMID: 33564213 PMCID: PMC7861008 DOI: 10.1007/s00521-020-05626-8] [Citation(s) in RCA: 72] [Impact Index Per Article: 24.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Accepted: 12/11/2020] [Indexed: 12/23/2022]
Abstract
The novel coronavirus (COVID-19) has spread to more than 200 countries worldwide, leading to more than 36 million confirmed cases as of October 10, 2020. As such, several machine learning models that can forecast the outbreak globally have been released. This work presents a review and brief analysis of the most important machine learning forecasting models against COVID-19. The work presented in this study possesses two parts. In the first section, a detailed scientometric analysis presents an influential tool for bibliometric analyses, which were performed on COVID-19 data from the Scopus and Web of Science databases. For the above-mentioned analysis, keywords and subject areas are addressed, while the classification of machine learning forecasting models, criteria evaluation, and comparison of solution approaches are discussed in the second section of the work. The conclusion and discussion are provided as the final sections of this study.
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Affiliation(s)
- Iman Rahimi
- Department of Mechanical and Manufacturing Engineering, Faculty of Engineering, Universiti Putra Malaysia, Seri Kembangan, Malaysia
| | - Fang Chen
- Data Science Institute, University of Technology Sydney, Ultimo, 2007 NSW Australia
| | - Amir H. Gandomi
- Data Science Institute, University of Technology Sydney, Ultimo, 2007 NSW Australia
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62
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Kudryashov NA, Chmykhov MA, Vigdorowitsch M. Analytical features of the SIR model and their applications to COVID-19. APPLIED MATHEMATICAL MODELLING 2021; 90:466-473. [PMID: 33012957 PMCID: PMC7521893 DOI: 10.1016/j.apm.2020.08.057] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 08/02/2020] [Accepted: 08/14/2020] [Indexed: 05/03/2023]
Abstract
A classic two-parameter epidemiological SIR-model of the coronavirus propagation is considered. The first integrals of the system of non-linear equations are obtained. The Painlevé test shows that the system of equations is not integrable in the general case. However, the general solution is obtained in quadrature as an inverse time-function. Using the first integrals of the system of equations, analytical dependencies for the number of infected patients I(t) and that of recovered patients R(t) on the number of susceptible to infection S(t) are obtained. A particular attention is paid to interrelation of I(t) and R(t) both depending on α/β, where α is the contact rate in the community and β is the intensity of recovery/decease of patients. It is demonstrated that the data on particular morbidity waves in Hubei (China), Italy, Austria, South Korea, Moscow (Russia) as well some Australian territories are satisfactorily described by the expressions obtained for I(R). The variability of parameter N having been traditionally considered as a static population size is discussed.
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Affiliation(s)
- Nikolay A Kudryashov
- Department of Applied Mathematics, National Research Nuclear University MEPhI (Moscow Engineering Physics Institute), 31 Kashirskoe Shosse, Moscow 115409, Russian Federation
| | - Mikhail A Chmykhov
- Department of Applied Mathematics, National Research Nuclear University MEPhI (Moscow Engineering Physics Institute), 31 Kashirskoe Shosse, Moscow 115409, Russian Federation
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63
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Prediction of the peak Covid-19 pandemic in Indonesia using SIR model. JURNAL TEKNOLOGI DAN SISTEM KOMPUTER 2021. [DOI: 10.14710/jtsiskom.2020.13877] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
This research implements the Susceptible, Infected, and Removed (SIR) model to predict the Covid-19 outbreak in Indonesia. The government official data, consisting of infected, dead, and recovered, are used as actual data to interpolate the model through matching data with minimum mean squared error (MSE). The study uses one of the Quasi-Newton search methods, the Broyden, Fletcher, Goldfarb, and Shanno (BFGS) algorithm, to determine the interaction coefficient's optimal value in the model with the minimum MSE value. Based on data as of July 18, 2020, it predicts that the peak of the infected number will be in October 2020 with around 14 % of the total population infected, and the MSE of 18.42 is relative to the period of the actual data. Meanwhile, the basic reproduction rate is calculated to be 2.035 from the model, where it is underestimated about 29 % compared to the relative basic reproduction rate from the provided actual data.
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64
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Anđelić N, Šegota SB, Lorencin I, Jurilj Z, Šušteršič T, Blagojević A, Protić A, Ćabov T, Filipović N, Car Z. Estimation of COVID-19 Epidemiology Curve of the United States Using Genetic Programming Algorithm. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:959. [PMID: 33499219 PMCID: PMC7908446 DOI: 10.3390/ijerph18030959] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Revised: 01/19/2021] [Accepted: 01/20/2021] [Indexed: 01/28/2023]
Abstract
Estimation of the epidemiology curve for the COVID-19 pandemic can be a very computationally challenging task. Thus far, there have been some implementations of artificial intelligence (AI) methods applied to develop epidemiology curve for a specific country. However, most applied AI methods generated models that are almost impossible to translate into a mathematical equation. In this paper, the AI method called genetic programming (GP) algorithm is utilized to develop a symbolic expression (mathematical equation) which can be used for the estimation of the epidemiology curve for the entire U.S. with high accuracy. The GP algorithm is utilized on the publicly available dataset that contains the number of confirmed, deceased and recovered patients for each U.S. state to obtain the symbolic expression for the estimation of the number of the aforementioned patient groups. The dataset consists of the latitude and longitude of the central location for each state and the number of patients in each of the goal groups for each day in the period of 22nd January 2020-3rd December 2020. The obtained symbolic expressions for each state are summed up to obtain symbolic expressions for estimation of each of the patient groups (confirmed, deceased and recovered). These symbolic expressions are combined to obtain the symbolic expression for the estimation of the epidemiology curve for the entire U.S. The obtained symbolic expressions for the estimation of the number of confirmed, deceased and recovered patients for each state achieved R2 score in the ranges 0.9406-0.9992, 0.9404-0.9998 and 0.9797-0.99955, respectively. These equations are summed up to formulate symbolic expressions for the estimation of the number of confirmed, deceased and recovered patients for the entire U.S. with achieved R2 score of 0.9992, 0.9997 and 0.9996, respectively. Using these symbolic expressions, the equation for the estimation of the epidemiology curve for the entire U.S. is formulated which achieved R2 score of 0.9933. Investigation showed that GP algorithm can produce symbolic expressions for the estimation of the number of confirmed, recovered and deceased patients as well as the epidemiology curve not only for the states but for the entire U.S. with very high accuracy.
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Affiliation(s)
- Nikola Anđelić
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (N.A.); (I.L.); (Z.C.)
| | - Sandi Baressi Šegota
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (N.A.); (I.L.); (Z.C.)
| | - Ivan Lorencin
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (N.A.); (I.L.); (Z.C.)
| | - Zdravko Jurilj
- Clinical Hospital Centre, Rijeka, Krešimirova ul. 42, 51000 Rijeka, Croatia; (Z.J.); (A.P.)
| | - Tijana Šušteršič
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Anđela Blagojević
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Alen Protić
- Clinical Hospital Centre, Rijeka, Krešimirova ul. 42, 51000 Rijeka, Croatia; (Z.J.); (A.P.)
- Faculty of Medicine, University of Rijeka, Ul. Braće Branchetta 20/1, 51000, Rijeka, Croatia
| | - Tomislav Ćabov
- Faculty of Dental Medicine, University of Rijeka, Kresimirova 40/42, 51000 Rijeka, Croatia;
| | - Nenad Filipović
- Faculty of Engineering, University of Kragujevac, Sestre Janjić, 34000 Kragujevac, Serbia; (T.Š.); (A.B.); (N.F.)
- Bioengineering Research and Development Centre (BioIRC), Prvoslava Stojanovića 6, 34000 Kragujevac, Serbia
| | - Zlatan Car
- Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia; (N.A.); (I.L.); (Z.C.)
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65
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Tayarani N MH. Applications of artificial intelligence in battling against covid-19: A literature review. CHAOS, SOLITONS, AND FRACTALS 2021; 142:110338. [PMID: 33041533 PMCID: PMC7532790 DOI: 10.1016/j.chaos.2020.110338] [Citation(s) in RCA: 59] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 10/01/2020] [Indexed: 05/14/2023]
Abstract
Colloquially known as coronavirus, the Severe Acute Respiratory Syndrome CoronaVirus 2 (SARS-CoV-2), that causes CoronaVirus Disease 2019 (COVID-19), has become a matter of grave concern for every country around the world. The rapid growth of the pandemic has wreaked havoc and prompted the need for immediate reactions to curb the effects. To manage the problems, many research in a variety of area of science have started studying the issue. Artificial Intelligence is among the area of science that has found great applications in tackling the problem in many aspects. Here, we perform an overview on the applications of AI in a variety of fields including diagnosis of the disease via different types of tests and symptoms, monitoring patients, identifying severity of a patient, processing covid-19 related imaging tests, epidemiology, pharmaceutical studies, etc. The aim of this paper is to perform a comprehensive survey on the applications of AI in battling against the difficulties the outbreak has caused. Thus we cover every way that AI approaches have been employed and to cover all the research until the writing of this paper. We try organize the works in a way that overall picture is comprehensible. Such a picture, although full of details, is very helpful in understand where AI sits in current pandemonium. We also tried to conclude the paper with ideas on how the problems can be tackled in a better way and provide some suggestions for future works.
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Affiliation(s)
- Mohammad-H Tayarani N
- Biocomputation Group, School of Computer Science, University of Hertfordshire, Hatfield, AL10 9AB, United Kingdom
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66
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Kalantari M. Forecasting COVID-19 pandemic using optimal singular spectrum analysis. CHAOS, SOLITONS, AND FRACTALS 2021; 142:110547. [PMID: 33311861 PMCID: PMC7719007 DOI: 10.1016/j.chaos.2020.110547] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2020] [Revised: 11/12/2020] [Accepted: 12/04/2020] [Indexed: 05/17/2023]
Abstract
Coronavirus disease 2019 (COVID-19) is a pandemic that has affected all countries in the world. The aim of this study is to examine the potential advantages of Singular Spectrum Analysis (SSA) for forecasting the number of daily confirmed cases, deaths, and recoveries caused by COVID-19, which are the three main variables of interest. This paper contributes to the literature on forecasting COVID-19 pandemic in several ways. Firstly, an algorithm is proposed to calculate the optimal parameters of SSA including window length and the number of leading components. Secondly, the results of two forecasting approaches in the SSA, namely vector and recurrent forecasting, are compared to those from other commonly used time series forecasting techniques. These include Autoregressive Integrated Moving Average (ARIMA), Fractional ARIMA (ARFIMA), Exponential Smoothing, TBATS, and Neural Network Autoregression (NNAR). Thirdly, the best forecasting model is chosen based on the accuracy measure Root Mean Squared Error (RMSE), and it is applied to forecast 40 days ahead. These forecasts can help us to predict the future behaviour of this disease and make better decisions. The dataset of Center for Systems Science and Engineering (CSSE) at Johns Hopkins University is adopted to forecast the number of daily confirmed cases, deaths, and recoveries for top ten affected countries until October 29, 2020. The findings of this investigation show that no single model can provide the best model for any of the countries and forecasting horizons considered here. However, the SSA technique is found to be viable option for forecasting the number of daily confirmed cases, deaths, and recoveries caused by COVID-19 based on the number of times that it outperforms the competing models.
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Affiliation(s)
- Mahdi Kalantari
- Department of Statistics, Payame Noor University, 19395-4697, Tehran, Iran
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67
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Zhu X, Song B, Shi F, Chen Y, Hu R, Gan J, Zhang W, Li M, Wang L, Gao Y, Shan F, Shen D. Joint prediction and time estimation of COVID-19 developing severe symptoms using chest CT scan. Med Image Anal 2021; 67:101824. [PMID: 33091741 PMCID: PMC7547024 DOI: 10.1016/j.media.2020.101824] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Revised: 08/23/2020] [Accepted: 09/25/2020] [Indexed: 02/08/2023]
Abstract
With the rapidly worldwide spread of Coronavirus disease (COVID-19), it is of great importance to conduct early diagnosis of COVID-19 and predict the conversion time that patients possibly convert to the severe stage, for designing effective treatment plans and reducing the clinicians' workloads. In this study, we propose a joint classification and regression method to determine whether the patient would develop severe symptoms in the later time formulated as a classification task, and if yes, the conversion time will be predicted formulated as a classification task. To do this, the proposed method takes into account 1) the weight for each sample to reduce the outliers' influence and explore the problem of imbalance classification, and 2) the weight for each feature via a sparsity regularization term to remove the redundant features of the high-dimensional data and learn the shared information across two tasks, i.e., the classification and the regression. To our knowledge, this study is the first work to jointly predict the disease progression and the conversion time, which could help clinicians to deal with the potential severe cases in time or even save the patients' lives. Experimental analysis was conducted on a real data set from two hospitals with 408 chest computed tomography (CT) scans. Results show that our method achieves the best classification (e.g., 85.91% of accuracy) and regression (e.g., 0.462 of the correlation coefficient) performance, compared to all comparison methods. Moreover, our proposed method yields 76.97% of accuracy for predicting the severe cases, 0.524 of the correlation coefficient, and 0.55 days difference for the conversion time.
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Affiliation(s)
- Xiaofeng Zhu
- Center for Future Media and school of computer science and technology, University of Electronic Science and Technology of China, Chengdu 611731, China.
| | - Bin Song
- Department of Radiology, Sichuan University West China Hospital, Chengdu 610041, China.
| | - Feng Shi
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Yanbo Chen
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Rongyao Hu
- Center for Future Media and school of computer science and technology, University of Electronic Science and Technology of China, Chengdu 611731, China; School of Natural and Computational Sciences, Massey University Auckland, Auckland 0745, New Zealand
| | - Jiangzhang Gan
- Center for Future Media and school of computer science and technology, University of Electronic Science and Technology of China, Chengdu 611731, China; School of Natural and Computational Sciences, Massey University Auckland, Auckland 0745, New Zealand
| | - Wenhai Zhang
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Man Li
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Liye Wang
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Yaozong Gao
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China
| | - Fei Shan
- Department of Radiology, Shanghai Public Health Clinical Center, Fudan University, Shanghai 201508, China.
| | - Dinggang Shen
- Department of Research and Development, Shanghai United Imaging Intelligence Co., Ltd., Shanghai 200232, China; School of Biomedical Engineering, ShanghaiTech University, Shanghai 201210, China; Department of Brain and Cognitive Engineering, Korea University, Seoul 02841, Republic of Korea.
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68
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Taşkın Z. Forecasting the future of library and information science and its sub-fields. Scientometrics 2020; 126:1527-1551. [PMID: 33353991 PMCID: PMC7745590 DOI: 10.1007/s11192-020-03800-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2020] [Accepted: 11/16/2020] [Indexed: 11/29/2022]
Abstract
Forecasting is one of the methods applied in many studies in the library and information science (LIS) field for numerous purposes, from making predictions of the next Nobel laureates to potential technological developments. This study sought to draw a picture for the future of the LIS field and its sub-fields by analysing 97 years of publication and citation patterns. The core Web of Science indexes were used as the data source, and 123,742 articles were examined in-depth for time series analysis. The social network analysis method was used for sub-field classification. The field was divided into four sub-fields: (1) librarianship and law librarianship, (2) health information in LIS, (3) scientometrics and information retrieval and (4) management and information systems. The results of the study show that the LIS sub-fields are completely different from each other in terms of their publication and citation patterns, and all the sub-fields have different dynamics. Furthermore, the number of publications, references and citations will increase significantly in the future. It is expected that more scholars will work together. The future subjects of the LIS field show astonishing diversity from fake news to predatory journals, open government, e-learning and electronic health records. However, the findings prove that publish or perish culture will shape the field. Therefore, it is important to go beyond numbers. It can only be achieved by understanding publication and citation patterns of the field and developing research policies accordingly.
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Affiliation(s)
- Zehra Taşkın
- Scholarly Communication Research Group, Adam Mickiewicz University in Poznań, Poznań, Poland
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69
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Affiliation(s)
- Nikita Saxena
- Department of Chemical Engineering, Indian Institute of Technology Delhi, Delhi, India
| | - Priyanka Gupta
- Department of Chemical Engineering, Indian Institute of Technology Delhi, Delhi, India
| | - Ruchir Raman
- Department of Chemical Engineering, Indian Institute of Technology Delhi, Delhi, India
| | - Anurag S. Rathore
- Department of Chemical Engineering, Indian Institute of Technology Delhi, Delhi, India
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70
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Aydin N, Yurdakul G. Assessing countries' performances against COVID-19 via WSIDEA and machine learning algorithms. Appl Soft Comput 2020; 97:106792. [PMID: 33071686 PMCID: PMC7556230 DOI: 10.1016/j.asoc.2020.106792] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 10/04/2020] [Accepted: 10/06/2020] [Indexed: 01/31/2023]
Abstract
The COVID-19 pandemic, which first spread to the People of Republic of China and then to other countries in a short time, affected the whole world by infecting millions of people and have been increasing its impact day by day. Hundreds of researchers in many countries are in search of a solution to end up this pandemic. This study aims to contribute to the literature by performing detailed analyses via a new three-staged framework constructed based on data envelopment analysis and machine learning algorithms to assess the performances of 142 countries against the COVID-19 outbreak. Particularly, clustering analyses were made using k-means and hierarchic clustering methods. Subsequently, efficiency analysis of countries were performed by a novel model, the weighted stochastic imprecise data envelopment analysis. Finally, parameters were analyzed with decision tree and random forest algorithms. Results have been analyzed in detail, and the classification of countries are determined by providing the most influential parameters. The analysis showed that the optimum number of clusters for 142 countries is three. In addition, while 20 countries out of 142 countries were fully effective, 36% of them were found to be effective at a rate of 90%. Finally, it has been observed that the data such as GDP, smoking rates, and the rate of diabetes patients do not affect the effectiveness level of the countries.
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Affiliation(s)
- Nezir Aydin
- Department of Industrial Engineering, Yildiz Technical University, Besiktas, 34349 Istanbul, Turkey
| | - Gökhan Yurdakul
- Department of Industrial Engineering, Yildiz Technical University, Besiktas, 34349 Istanbul, Turkey
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71
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Mousavi M, Salgotra R, Holloway D, Gandomi AH. COVID-19 Time Series Forecast Using Transmission Rate and Meteorological Parameters as Features. IEEE COMPUT INTELL M 2020. [DOI: 10.1109/mci.2020.3019895] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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72
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Tseng VS, Jia-Ching Ying J, Wong ST, Cook DJ, Liu J. Computational Intelligence Techniques for Combating COVID-19: A Survey. IEEE COMPUT INTELL M 2020. [DOI: 10.1109/mci.2020.3019873] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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73
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Khan F, Saeed A, Ali S. Modelling and forecasting of new cases, deaths and recover cases of COVID-19 by using Vector Autoregressive model in Pakistan. CHAOS, SOLITONS, AND FRACTALS 2020; 140:110189. [PMID: 32834659 PMCID: PMC7405884 DOI: 10.1016/j.chaos.2020.110189] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Accepted: 08/04/2020] [Indexed: 05/22/2023]
Abstract
COVID-19 emerged in Wuhan, China in December 2019 has now spread around the world causes damage to human life and economy. Pakistan is also severely effected by COVID-19 with 202,955 confirmed cases and total deaths of 4,118. Vector Autoregressive time series models was used to forecast new daily confirmed cases, deaths and recover cases for ten days. Our forecasted model results show maximum of 5,363/day new cases with 95% confidence interval of 3,013-8,385 on 3rd of July, 167/day deaths with 95% confidence interval of 112-233 and maximum recoveries 4,016/day with 95% confidence interval of 2,182-6,405 in the next 10 days. The findings of this research may help government and other agencies to reshape their strategies according to the forecasted situation. As the data generating process is identified in terms of time series models, then it can be updated with the arrival of new data and provide forecasted scenario in future.
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Affiliation(s)
- Firdos Khan
- School of Natural Sciences (SNS), National University of Sciences and Technology (NUST), H-12 Sector, 44000 Islamabad, Pakistan
| | | | - Shaukat Ali
- Global Change Impact Studies Centre (GCISC), Ministry of Climate Change, Islamabad, Pakistan
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74
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Bhardwaj R, Bangia A. Data driven estimation of novel COVID-19 transmission risks through hybrid soft-computing techniques. CHAOS, SOLITONS, AND FRACTALS 2020; 140:110152. [PMID: 32834640 PMCID: PMC7381942 DOI: 10.1016/j.chaos.2020.110152] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Accepted: 07/23/2020] [Indexed: 05/16/2023]
Abstract
Coronavirus genomic infection-2019 (COVID-19) has been announced as a serious health emergency arising international awareness due to its spread to 201 countries at present. In the month of April of the year 2020, it has certainly taken the pandemic outbreak of approximately 11,16,643 infections confirmed leading to around 59,170 deaths have been recorded world-over. This article studies multiple countries-based pandemic spread for the development of the COVID-19 originated in the China. This paper focuses on forecasting via real-time responses data to inherit an idea about the increase and maximum number of virus-infected cases for the various regions. In addition, it will help to understand the panic that surrounds this nCoV-19 for some intensely affecting states possessing different important demographic characteristics that would be affecting the disease characteristics. This study aims at developing soft-computing hybrid models for calculating the transmissibility of this genome viral. The analysis aids the study of the outbreak of this virus towards the other parts of the continent and the world. A hybrid of wavelet decomposed data into approximations and details then trained & tested through neuronal-fuzzification approach. Wavelet-based forecasting model predicts for shorter time span such as five to ten days advanced number of confirmed, death and recovered cases of China, India and USA. While data-based prediction through interpolation applied through moving average predicts for longer time spans such as 50-60 days ahead with lesser accuracy as compared to that of wavelet-based hybrids. Based on the simulations, the significance level (alpha) ranges from 0.10 to 0.67, MASE varying from 0.06 to 5.76, sMAPE ranges from 0.15 to 1.97, MAE varies from 22.59 to 6024.76, RMSE shows a variation from 3.18 to 8360.29 & R2 varying through 0.0018 to 0.7149. MASE and sMAPE are relatively lesser applied and novel measures that aimed to achieve increase in accuracy. They eliminated skewness and made the model outlier-free. Estimates of the awaited outburst for regions in this study are India, China and the USA that will help in the improvement of apportionment of healthcare facilities as it can act as an early-warning system for government policy-makers. Thus, data-driven analysis will provide deep insights into the study of transmission of this viral genome estimation towards immensely affected countries. Also, the study with the help of transmission concern aims to eradicate the panic and stigma that has spread like wildfire and has become a significant part of this pandemic in these times.
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Affiliation(s)
- Rashmi Bhardwaj
- Nonlinear Dynamics Research Lab, University School of Basic & Applied Sciences, GGS Indraprastha University B-504, Delhi 110078 India
| | - Aashima Bangia
- Research Scholar, USBAS, GGS Indraprastha University, Delhi, India
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75
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Salgotra R, Gandomi M, Gandomi AH. Evolutionary modelling of the COVID-19 pandemic in fifteen most affected countries. CHAOS, SOLITONS, AND FRACTALS 2020; 140:110118. [PMID: 32834632 PMCID: PMC7367045 DOI: 10.1016/j.chaos.2020.110118] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Accepted: 07/10/2020] [Indexed: 05/03/2023]
Abstract
COVID-19 or SARS-Cov-2, affecting 6 million people and more than 300,000 deaths, the global pandemic has engulfed more than 90% countries of the world. The virus started from a single organism and is escalating at a rate of 3% to 5% daily and seems to be a never ending process. Understanding the basic dynamics and presenting new predictions models for evaluating the potential effect of the virus is highly crucial. In present work, an evolutionary data analytics method called as Genetic programming (GP) is used to mathematically model the potential effect of coronavirus in 15 most affected countries of the world. Two datasets namely confirmed cases (CC) and death cases (DC) were taken into consideration to estimate, how transmission varied in these countries between January 2020 and May 2020. Further, a percentage rise in the number of daily cases is also shown till 8 June 2020 and it is expected that Brazil will have the maximum rise in CC and USA have the most DC. Also, prediction of number of new CC and DC cases for every one million people in each of these countries is presented. The proposed model predicted that the transmission of COVID-19 in China is declining since late March 2020; in Singapore, France, Italy, Germany and Spain the curve has stagnated; in case of Canada, South Africa, Iran and Turkey the number of cases are rising slowly; whereas for USA, UK, Brazil, Russia and Mexico the rate of increase is very high and control measures need to be taken to stop the chains of transmission. Apart from that, the proposed prediction models are simple mathematical equations and future predictions can be drawn from these general equations. From the experimental results and statistical validation, it can be said that the proposed models use simple linkage functions and provide highly reliable results for time series prediction of COVID-19 in these countries.
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Affiliation(s)
- Rohit Salgotra
- Dept. of ECE, Thapar Institute of Engineering & Technology, Patiala, India
| | - Mostafa Gandomi
- School of Civil Engineering, University of Tehran, Tehran, Iran
| | - Amir H Gandomi
- Faculty of Engineering & Information Technology, University of Technology Sydney, NSW 2007, Australia
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76
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Dansana D, Kumar R, Das Adhikari J, Mohapatra M, Sharma R, Priyadarshini I, Le DN. Global Forecasting Confirmed and Fatal Cases of COVID-19 Outbreak Using Autoregressive Integrated Moving Average Model. Front Public Health 2020; 8:580327. [PMID: 33194982 PMCID: PMC7658382 DOI: 10.3389/fpubh.2020.580327] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2020] [Accepted: 08/31/2020] [Indexed: 12/21/2022] Open
Abstract
The world health organization (WHO) formally proclaimed the novel coronavirus, called COVID-19, a worldwide pandemic on March 11 2020. In December 2019, COVID-19 was first identified in Wuhan city, China, and now coronavirus has spread across various nations infecting more than 198 countries. As the cities around China started getting contaminated, the number of cases increased exponentially. As of March 18 2020, the number of confirmed cases worldwide was more than 250,000, and Asia alone had more than 81,000 cases. The proposed model uses time series analysis to forecast the outbreak of COVID-19 around the world in the upcoming days by using an autoregressive integrated moving average (ARIMA). We analyze data from February 1 2020 to April 1 2020. The result shows that 120,000 confirmed fatal cases are forecasted using ARIMA by April 1 2020. Moreover, we have also evaluated the total confirmed cases, the total fatal cases, autocorrelation function, and white noise time-series for both confirmed cases and fatalities in the COVID-19 outbreak.
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Affiliation(s)
- Debabrata Dansana
- Department of Computer Science and Engineering, GIET University, Gunupur, India
| | - Raghvendra Kumar
- Department of Computer Science and Engineering, GIET University, Gunupur, India
| | | | - Mans Mohapatra
- Department of Computer Science and Engineering, GIET University, Gunupur, India
| | - Rohit Sharma
- Department of Electronics & Communication Engineering, SRM Institute of Science and Technology, Ghaziabad, India
| | - Ishaani Priyadarshini
- Department of Electrical and Computer Engineering, University of Delaware, Newark, DE, United States
| | - Dac-Nhuong Le
- Institute of Research and Development, Duy Tan University, Da Nang, Vietnam
- Faculty of Information Technology, Duy Tan University, Da Nang, Vietnam
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Forecasting the epidemiological trends of COVID-19 prevalence and mortality using the advanced α-Sutte Indicator. Epidemiol Infect 2020; 148:e236. [PMID: 33012300 PMCID: PMC7562786 DOI: 10.1017/s095026882000237x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Forecasting the epidemics of the diseases is very valuable in planning and supplying resources effectively. This study aims to estimate the epidemiological trends of the coronavirus disease 2019 (COVID-19) prevalence and mortality using the advanced α-Sutte Indicator, and its prediction accuracy level was compared with the most frequently adopted autoregressive integrated moving average (ARIMA) method. Time-series analysis was performed based on the total confirmed cases and deaths of COVID-19 in the world, Brazil, Peru, Canada and Chile between 27 February 2020 and 30 June 2020. By comparing the prediction reliability indices, including the root mean square error, mean absolute error, mean error rate, mean absolute percentage error and root mean square percentage error, the α-Sutte Indicator was found to produce lower forecasting error rates than the ARIMA model in all data apart from the prevalence testing set globally. The α-Sutte Indicator can be recommended as a useful tool to nowcast and forecast the COVID-19 prevalence and mortality of these regions except for the prevalence around the globe in the near future, which will help policymakers to plan and prepare health resources effectively. Also, the findings of our study may have managerial implications for the outbreak in other countries.
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Behnood A, Mohammadi Golafshani E, Hosseini SM. Determinants of the infection rate of the COVID-19 in the U.S. using ANFIS and virus optimization algorithm (VOA). CHAOS, SOLITONS, AND FRACTALS 2020; 139:110051. [PMID: 32834605 PMCID: PMC7315966 DOI: 10.1016/j.chaos.2020.110051] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 06/23/2020] [Indexed: 05/04/2023]
Abstract
Recently, anovel coronavirus disease (COVID-19) has become a serious concern for global public health. Infectious disease outbreaks such as COVID-19 can also significantly affect the sustainable development of urban areas. Several factors such as population density and climatology parameters could potentially affect the spread of the COVID-19. In this study, a combination of the virus optimization algorithm (VOA) and adaptive network-based fuzzy inference system (ANFIS) was used to investigate the effects of various climate-related factors and population density on the spread of the COVID-19. For this purpose, data on the climate-related factors and the confirmed infected cases by the COVID-19 across the U.S counties was used. The results show that the variable defined for the population density had the most significant impact on the performance of the developed models, which is an indication of the importance of social distancing in reducing the infection rate and spread rate of the COVID-19. Among the climatology parameters, an increase in the maximum temperature was found to slightly reduce the infection rate. Average temperature, minimum temperature, precipitation, and average wind speed were not found to significantly affect the spread of the COVID-19 while an increase in the relative humidity was found to slightly increase the infection rate. The findings of this research show that it could be expected to have slightly reduced infection rate over the summer season. However, it should be noted that the models developed in this study were based on limited one-month data. Future investigation can benefit from using more comprehensive data covering a wider range for the input variables.
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Affiliation(s)
- Ali Behnood
- Lyles School of Civil Engineering, Purdue University, 550 W Stadium Ave, West Lafayette, IN 47907-2051, USA
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Kumar A, Rani P, Kumar R, Sharma V, Purohit SR. Data-driven modelling and prediction of COVID-19 infection in India and correlation analysis of the virus transmission with socio-economic factors. Diabetes Metab Syndr 2020; 14:1231-1240. [PMID: 32683321 PMCID: PMC7347321 DOI: 10.1016/j.dsx.2020.07.008] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Revised: 07/02/2020] [Accepted: 07/04/2020] [Indexed: 01/01/2023]
Abstract
AIMS The current study attempts to model the COVID-19 outbreak in India, USA, China, Japan, Italy, Iran, Canada and Germany. The interactions of coronavirus transmission with socio-economic factors in India using the multivariate approach were also investigated. METHODS Actual cumulative infected population data from 15 February to May 15, 2020 was used for determination of parameters of a nested exponential statistical model, which were further employed for the prediction of infection. Correlation and Principal component analysis provided the relationships of coronavirus spread with socio-economic factors of different states of India using the Rstudio software. RESULTS Cumulative infection and spreadability rate predicted by the model was in good agreement with the actual observed data for all countries (R2 = 0.985121 to 0.999635, and MD = 1.2-7.76%) except Iran (R2 = 0.996316, and MD = 18.38%). Currently, the infection rate in India follows an upward trajectory, while other countries show a downward trend. The model claims that India is likely to witness an increased spreading rate of COVID-19 in June and July. Moreover, the flattening of the cumulative infected population is expected to be obtained in October infecting more than 12 lakhs people. Indian states with higher population were more susceptible to virus infection. CONCLUSIONS A long-term prediction of cumulative cases, spreadability rate, pandemic peak of COVID-19 was made for India. Prediction provided by the model considering most recent data is useful for making appropriate interventions to deal with the rapidly emerging pandemic.
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Affiliation(s)
- Amit Kumar
- Agricultural and Food Engineering Department, Indian Institute of Technology Kharagpur, West Bengal, 721302, India.
| | - Poonam Rani
- Agricultural and Food Engineering Department, Indian Institute of Technology Kharagpur, West Bengal, 721302, India.
| | - Rahul Kumar
- Vignan's Foundation for Science Technology and Research, Guntur, Andhra Pradesh, 522213, India.
| | - Vasudha Sharma
- Department of Food Technology, Jamia Hamdard, New Delhi, 110062, India.
| | - Soumya Ranjan Purohit
- Amity Institute of Food Technology, Amity University Uttar Pradesh, Noida, 201313, India.
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