51
|
|
52
|
Miyake R. Constructing multicomponent cooperative functional systems using metal complexes of short flexible peptides. Chem Commun (Camb) 2021; 57:7987-7996. [PMID: 34312645 DOI: 10.1039/d1cc03101e] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The construction of cooperative systems comprising several units is an essential challenge for artificial systems toward the development of sophisticated functions comparable to those found in biological systems. Flexible frameworks possessing various functional groups that can form weak intra/intermolecular interactions similar to those observed in biological systems have promising design features for artificial systems used to control cooperative systems. However, it is difficult to construct multiple component systems >1 nm using these flexible units by controlling the arrangement of functional units, beginning with the precise control of the cooperative switching of multiple units. In general, it is difficult for oligopeptides to form stable conformations by themselves, although they have designability and structural features suitable for the development of cooperative systems. Increasing the number of coordination bonds in peptides, which are stronger than hydrogen bonds, can be used to control the assembled peptide structures and stabilize their structures owing to the variety of coordination bonds and selective binding affinity. Thus, metal complexes of artificial short peptides have great potential for the development of multicomponent cooperative systems. Based on this concept, we have developed a series of novel metal complexes of flexible peptides and have achieved, to date, cooperative systems, the formation of giant structures, and precise control over the functional units that are the essential bases for designable multifunctional systems that can be regarded as artificial enzymes. In this feature article, we summarize these results and discuss the principal/essential design of artificial systems.
Collapse
Affiliation(s)
- Ryosuke Miyake
- Department of Chemistry and Biochemistry, Graduate School of Humanities and Sciences, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo 112-8610, Japan.
| |
Collapse
|
53
|
Kumar U, Ramakrishna B, Varghese J, Vidhyapriya P, Sakthivel N, Manimaran B. Self-Assembled Manganese(I)-Based Selenolato-Bridged Tetranuclear Metallorectangles: Host-Guest Interaction, Anticancer, and CO-Releasing Studies. Inorg Chem 2021; 60:13284-13298. [PMID: 34357751 DOI: 10.1021/acs.inorgchem.1c01636] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Supramolecular one-step self-assembly of dimanganese decacarbonyl, diaryl diselenide, and linear dipyridyl ligands (L = pyrazine (pz), 4,4'-bipyridine (bpy), and trans-1,2-bis(4-pyridyl)ethylene (bpe)) has resulted in the formation of selenolato-bridged manganese(I)-based metallorectangles. The synthesis of tetranuclear Mn(I)-based metallorectangles [{(CO)3Mn(μ-SeR)2Mn(CO)3}2(μ-L)2] (1-6) was facilitated by the oxidative addition of diaryl diselenide to dimanganese decacarbonyl with the simultaneous coordination of linear bidentate pyridyl linker in an orthogonal fashion. Formation of metallorectangles 1-6 was ascertained using IR, UV-vis, NMR spectroscopic techniques, and elemental analyses. The molecular mass of compounds 2, 4, and 6 were determined by ESI-mass spectrometry. Solid-state structural elucidation of 2, 3, and 6 by single-crystal X-ray diffraction methods revealed a rectangular framework wherein selenolato-bridges and pyridyl ligands define the shorter and longer edges, respectively. Also, the guest binding capability of metallorectangles 3 and 5 with different aromatic guests was studied using UV-vis absorption and emission spectrophotometric titration methods that affirmed strong host-guest binding interactions. The formation of the host-guest complex between metallorectangle 3 and pyrene has been explicitly corroborated by the single-crystal X-ray structure of 3•pyrene. Moreover, select metallorectangles 1-4 and 6 were studied to explore their anticancer activity, while CO-releasing ability of metallorectangle 2 was further appraised using equine heart myoglobin assay.
Collapse
Affiliation(s)
- Udit Kumar
- Department of Chemistry, Pondicherry University, Puducherry 605014, India
| | - Buthanapalli Ramakrishna
- Division of Chemistry, School of Advanced Sciences, Vellore Institute of Technology, Chennai Campus, Vandalur-Kelambakkam Road, Tamil Nadu 600127, India
| | - Jisna Varghese
- Department of Chemistry, Pondicherry University, Puducherry 605014, India
| | | | - Natarajan Sakthivel
- Department of Biotechnology, Pondicherry University, Puducherry 605014, India
| | - Bala Manimaran
- Department of Chemistry, Pondicherry University, Puducherry 605014, India
| |
Collapse
|
54
|
Lu Y, Liu D, Lin YJ, Li ZH, Hahn FE, Jin GX. An "All-in-One" Synthetic Strategy for Linear Metalla[4]Catenanes. J Am Chem Soc 2021; 143:12404-12411. [PMID: 34337934 DOI: 10.1021/jacs.1c06689] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
One fascinating and challenging synthetic target in the field of mechanically interlocked molecules is the family of linear [4]catenanes, which are topologically identical to the logo of automobile maker Audi. Herein, we report an "all-in-one" synthetic strategy for the synthesis of linear metalla[n]catenanes (n = 2-4) by the coordination-driven self-assembly of Cp*Rh-based (Cp* = η5-pentamethylcyclopentadienyl) organometallic rectangle π-donors and tetracationic organic cyclophane π-acceptors. We selected the pyrenyl group as the π-donor unit, leading to homogeneous metalla[2]catenanes and cyclic metalla[3]catenanes via π-stacking interactions. By taking advantage of the strong electrostatic interactions between π-donor units and π-acceptor units, a heterogeneous metalla[2]catenanes and linear metalla[3]catenanes, respectively, could be obtained by the simple stirring of homogeneous metalla[2]catenanes with a suitable tetracationic cyclophane. On this basis, this "all-in-one" synthetic strategy was further used to realize a quantitative one-step synthesis of a linear metalla[4]catenanes via the self-assembly of cyclic metalla[3]catenanes and tetracationic cyclophanes. All heterogeneous metalla[n]catenanes (n = 2-4) were fully characterized by single-crystal X-ray analysis, NMR spectroscopy and electrospray ionization mass spectrometry.
Collapse
Affiliation(s)
- Ye Lu
- Department of Chemistry, State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2005 Songhu road, Shanghai 200438, P. R. China.,Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstraße 30, Münster 48149, Germany
| | - Dong Liu
- Department of Chemistry, State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2005 Songhu road, Shanghai 200438, P. R. China
| | - Yue-Jian Lin
- Department of Chemistry, State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2005 Songhu road, Shanghai 200438, P. R. China
| | - Zhen-Hua Li
- Department of Chemistry, State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2005 Songhu road, Shanghai 200438, P. R. China
| | - F Ekkehardt Hahn
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstraße 30, Münster 48149, Germany
| | - Guo-Xin Jin
- Department of Chemistry, State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2005 Songhu road, Shanghai 200438, P. R. China
| |
Collapse
|
55
|
Zhang HN, Lin YJ, Jin GX. Selective Construction of Trefoil knots and a Molecular Borromean Ring Induced by Steric Hindrance of Thioether Ligands. Chem Asian J 2021; 16:1918-1924. [PMID: 33960138 DOI: 10.1002/asia.202100450] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 05/05/2021] [Indexed: 11/08/2022]
Abstract
Two Cp*-RhIII based trefoil knots were obtained in high yield under ambient conditions via the coordination-driven self-assembly of semi-rigid thioether dipyridyl ligand 1,4-bis[(pyridin-4-ylthio)methyl]benzene (L1 ), ligand chloranilic acid (H2 -CA) and 6,11-dihydroxytetracene-5,12-dione (H2 -TtDo) with Cp*RhIII metal corner units, respectively. Furthermore, using the bulkier 4,4'-{[(2,5-dimethyl-1,4-phenylene)bis(methylene)]bis(sulfanediyl)}dipyridine (L2 ) in the place of ligand L1 in the construction process resulted in the formation of a teranuclear metallacycle and a template-free Borromean ring in high yields thanks to significantly altered intermolecular forces between the constituent ligands induced by the sterically-hindering methyl groups of L2 , as demonstrated via a detailed X-ray crystallographic analysis and NMR spectroscopy.
Collapse
Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai, 200433, P. R. China
| |
Collapse
|
56
|
Carpenter JP, McTernan CT, Greenfield JL, Lavendomme R, Ronson TK, Nitschke JR. Controlling the shape and chirality of an eight-crossing molecular knot. Chem 2021. [DOI: 10.1016/j.chempr.2021.03.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
57
|
Guo Z, Zhao J, Liu Y, Li G, Wang H, Hou Y, Zhang M, Li X, Yan X. Conformational effect on fluorescence emission of tetraphenylethylene-based metallacycles. CHINESE CHEM LETT 2021. [DOI: 10.1016/j.cclet.2020.12.028] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
|
58
|
Dey S, Misra R, Saseendran A, Pahan S, Gopi HN. Metal‐Coordinated Supramolecular Polymers from the Minimalistic Hybrid Peptide Foldamers. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202015838] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Sanjit Dey
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Rajkumar Misra
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Abhijith Saseendran
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Saikat Pahan
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Hosahudya N. Gopi
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| |
Collapse
|
59
|
Dey S, Misra R, Saseendran A, Pahan S, Gopi HN. Metal‐Coordinated Supramolecular Polymers from the Minimalistic Hybrid Peptide Foldamers. Angew Chem Int Ed Engl 2021; 60:9863-9868. [DOI: 10.1002/anie.202015838] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 01/19/2021] [Indexed: 11/11/2022]
Affiliation(s)
- Sanjit Dey
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Rajkumar Misra
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Abhijith Saseendran
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Saikat Pahan
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| | - Hosahudya N. Gopi
- Department of Chemistry Indian Institute of Science Education and Research (IISER), Pune Dr. Homi Bhabha Road Pune 411008 India
| |
Collapse
|
60
|
Ariga K, Shionoya M. Nanoarchitectonics for Coordination Asymmetry and Related Chemistry. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20200362] [Citation(s) in RCA: 56] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Katsuhiko Ariga
- World Premier International (WPI) Research Centre for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - Mitsuhiko Shionoya
- Department of Chemistry, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| |
Collapse
|
61
|
Leigh DA, Danon JJ, Fielden SDP, Lemonnier JF, Whitehead GFS, Woltering SL. A molecular endless (7 4) knot. Nat Chem 2021; 13:117-122. [PMID: 33318672 DOI: 10.1038/s41557-020-00594-x] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 10/23/2020] [Indexed: 01/30/2023]
Abstract
Current strategies for the synthesis of molecular knots focus on twisting, folding and/or threading molecular building blocks. Here we report that Zn(II) or Fe(II) ions can be used to weave ligand strands to form a woven 3 × 3 molecular grid. We found that the process requires tetrafluoroborate anions to template the assembly of the interwoven grid by binding within the square cavities formed between the metal-coordinated criss-crossed ligands. The strand ends of the grid can subsequently be joined through within-grid alkene metathesis reactions to form a topologically trivial macrocycle (unknot), a doubly interlocked [2]catenane (Solomon link) and a knot with seven crossings in a 258-atom-long closed loop. This 74 knot topology corresponds to that of an endless knot, which is a basic motif of Celtic interlace, the smallest Chinese knot and one of the eight auspicious symbols of Buddhism and Hinduism. The weaving of molecular strands within a discrete layer by anion-template metal-ion coordination opens the way for the synthesis of other molecular knot topologies and to woven polymer materials.
Collapse
Affiliation(s)
- David A Leigh
- School of Chemistry and Molecular Engineering, East China Normal University, Shanghai, China. .,Department of Chemistry, University of Manchester, Manchester, UK.
| | - Jonathan J Danon
- Department of Chemistry, University of Manchester, Manchester, UK
| | | | | | | | | |
Collapse
|
62
|
McTernan CT, Ronson TK, Nitschke JR. Selective Anion Binding Drives the Formation of Ag I8L 6 and Ag I12L 6 Six-Stranded Helicates. J Am Chem Soc 2021; 143:664-670. [PMID: 33382246 PMCID: PMC7879535 DOI: 10.1021/jacs.0c11905] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Indexed: 12/11/2022]
Abstract
Here we describe the formation of an unexpected and unique family of hollow six-stranded helicates. The formation of these structures depends on the coordinative flexibility of silver and the 2-formyl-1,8-napthyridine subcomponent. Crystal structures show that these assemblies are held together by Ag4I, Ag4Br, or Ag6(SO4)2 clusters, where the templating anion plays an integral structure-defining role. Prior to the addition of the anionic template, no six-stranded helicate was observed to form, with the system instead consisting of a dynamic mixture of triple helicate and tetrahedron. Six-stranded helicate formation was highly sensitive to the structure of the ligand, with minor modifications inhibiting its formation. This work provides an unusual example of mutual stabilization between metal clusters and a self-assembled metal-organic cage. The selective preparation of this anisotropic host demonstrates new modes of guiding selective self-assembly using silver(I), whose many stable coordination geometries render design difficult.
Collapse
Affiliation(s)
- Charlie T. McTernan
- Department of Chemistry, University of Cambridge,
Lensfield Road, Cambridge CB2 1EW, United Kingdom
| | - Tanya K. Ronson
- Department of Chemistry, University of Cambridge,
Lensfield Road, Cambridge CB2 1EW, United Kingdom
| | - Jonathan R. Nitschke
- Department of Chemistry, University of Cambridge,
Lensfield Road, Cambridge CB2 1EW, United Kingdom
| |
Collapse
|
63
|
Chen M, Cao JN, Li S, Liu D, Wang J, Zhao H, Wang G, Wu T, Jiang Z, Wang P. Customized self-assembled molecules: rim adjustable coronal polygons with multiple-folds symmetry. Org Chem Front 2021. [DOI: 10.1039/d1qo01316e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three desired discrete metallomacrocyclic wreaths with four-, five- and six-fold symmetry were successfully realized in a controlled fashion.
Collapse
Affiliation(s)
- Mingzhao Chen
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Jia-nan Cao
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Suqing Li
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Die Liu
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Jun Wang
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - He Zhao
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Guotao Wang
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Tun Wu
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Zhilong Jiang
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Pingshan Wang
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
- Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| |
Collapse
|
64
|
Zhang HN, Lin YJ, Jin GX. Selective Construction of Very Large Stacking-Interaction-Induced Molecular 818 Metalla-knots and Borromean Ring Using Curved Dipyridyl Ligands. J Am Chem Soc 2020; 143:1119-1125. [DOI: 10.1021/jacs.0c11925] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Hai-Ning Zhang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P.R. China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032 P.R. China
| |
Collapse
|
65
|
Song Y, Schaufelberger F, Ashbridge Z, Pirvu L, Vitorica-Yrezabal IJ, Leigh DA. Effects of turn-structure on folding and entanglement in artificial molecular overhand knots. Chem Sci 2020; 12:1826-1833. [PMID: 34163946 PMCID: PMC8179330 DOI: 10.1039/d0sc05897a] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The length and constitution of spacers linking three 2,6-pyridinedicarboxamide units in a molecular strand influence the tightness of the resulting overhand (open-trefoil) knot that the strand folds into in the presence of lanthanide(iii) ions. The use of β-hairpin forming motifs as linkers enables a metal-coordinated pseudopeptide with a knotted tertiary structure to be generated. The resulting pseudopeptide knot has one of the highest backbone-to-crossing ratios (BCR)—a measure of knot tightness (a high value corresponding to looseness)—for a synthetic molecular knot to date. Preorganization in the crossing-free turn section of the knot affects aromatic stacking interactions close to the crossing region. The metal-coordinated pseudopeptide knot is compared to overhand knots with other linkers of varying tightness and turn preorganization, and the entangled architectures characterized by NMR spectroscopy, ESI-MS, CD spectroscopy and, in one case, X-ray crystallography. The results show how it is possible to program specific conformational properties into different key regions of synthetic molecular knots, opening the way to systems where knotting can be systematically incorporated into peptide-like chains through design. Spacers linking 2,6-pyridinedicarboxamide units influence the tightness of the corresponding lanthanide-coordinated overhand knot. β-Hairpin forming motifs generate a metal-coordinated pseudopeptide with a knotted tertiary structure.![]()
Collapse
Affiliation(s)
- Yiwei Song
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China
| | | | - Zoe Ashbridge
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | - Lucian Pirvu
- Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| | | | - David A Leigh
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University Shanghai 200062 PR China .,Department of Chemistry, University of Manchester Oxford Road Manchester M13 9PL UK
| |
Collapse
|
66
|
|
67
|
Chen XY, Shen D, Cai K, Jiao Y, Wu H, Song B, Zhang L, Tan Y, Wang Y, Feng Y, Stern CL, Stoddart JF. Suit[3]ane. J Am Chem Soc 2020; 142:20152-20160. [PMID: 33180476 DOI: 10.1021/jacs.0c09896] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Suitanes are a class of mechanically interlocked molecules (MIMs) that consist of two components: a body with limbs protruding outward and a suit that fits appropriately around it, so that there is no easy way for the suit to be removed from the body. Herein, we report the synthesis and characterization of a suit[3]ane, which contains a benzotrithiophene derivative (THBTT) with three protruding hexyl chains as the body and a 3-fold symmetric, extended pyridinium-based cage, namely, HexaCage6+, as the suit. Central to its realization is effective templation, provided by THBTT during cage formation, an observation that has been supported by the strong binding constant between benzotrithiophene (BTT) and the empty cage. The solid-state structure of the suit[3]ane reveals that the body is confined within the suit's cavity with its alkyl chains protruding outward through the orifices in the cage. Notably, such a seemingly unstable molecule, having three flexible alkyl chains as its only protruding limbs, does not dissociate after prolonged heating in CD3CN at 100 °C under pressure for 7 days. No evidence for guest exchange with the host was observed at this temperature in a 2:1 mixture of THBTT and HexaCage6+ in CD3CN. The results indicate that flexible protruding limbs are sufficient for a suit[3]ane to remain mechanically stable even at high temperatures in solution.
Collapse
Affiliation(s)
- Xiao-Yang Chen
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Dengke Shen
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,Institutes of Physical Science and Information Technology, Anhui University, Hefei 230601, China
| | - Kang Cai
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yang Jiao
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Huang Wu
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Bo Song
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Long Zhang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yu Tan
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yu Wang
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Yuanning Feng
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Charlotte L Stern
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - J Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States.,School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
| |
Collapse
|
68
|
Wang J, Zhao H, Chen M, Jiang Z, Wang F, Wang G, Li K, Zhang Z, Liu D, Jiang Z, Wang P. Construction of Macromolecular Pinwheels Using Predesigned Metalloligands. J Am Chem Soc 2020; 142:21691-21701. [PMID: 33206521 DOI: 10.1021/jacs.0c08020] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Developing a methodology to build target structures is one of the major themes of synthetic chemistry. However, it has proven to be immensely challenging to achieve multilevel elaborate molecular architectures in a predictable way. Herein, we describe the self-assembly of a series of pinwheel-shaped starlike supramolecules through three rationally preorganized metalloligands L1-L3. The key octa-uncomplexed terpyridine (tpy) metalloligand L3, synthesized with an 8-fold Suzuki coupling reaction to metal-containing complexes, has four different types of terpyridines connected with three ⟨tpy-Ru2+-tpy⟩ units, making this the most subunits known so far for a preorganized module. Based on the principle of geometric complementation and the high "density of coordination sites", these metalloligands were assembled with Zn2+ ions to form a pinwheel-shaped star trigon P1, pentagram P2, and hexagram P3 with precisely controlled shapes in nearly quantitative yields. With molecular weights ranging from 16756 to 56053 Da and diameters of 6.7-13.6 nm, the structural composition, shape, and rigidity of these pinwheel-shaped architectures have been fully characterized by 1D and 2D (NMR), electrospray ionization mass spectrometry, traveling-wave ion mobility mass spectrometry, and transmission electron microscopy.
Collapse
Affiliation(s)
- Jun Wang
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - He Zhao
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Mingzhao Chen
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Zhiyuan Jiang
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Feng Wang
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Guotao Wang
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Kaixiu Li
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China
| | - Zhe Zhang
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Die Liu
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Zhilong Jiang
- Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| | - Pingshan Wang
- Department of Organic and Polymer Chemistry; Hunan Key Laboratory of Micro & Nano Materials Interface Science, College of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan 410083, China.,Institute of Environmental Research at Greater Bay Area; Key Laboratory for Water Quality and Conservation of the Pearl River Delta, Ministry of Education; Guangzhou Key Laboratory for Clean Energy and Materials, Guangzhou University, Guangzhou 510006, China
| |
Collapse
|
69
|
Kimura T, Miyagawa S, Takaya H, Naito M, Tokunaga Y. Locking the Dynamic Axial Chirality of Biphenyl Crown Ethers through Threading. Chem Asian J 2020; 15:3897-3903. [PMID: 33026146 DOI: 10.1002/asia.202001046] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Revised: 09/26/2020] [Indexed: 12/17/2022]
Abstract
This paper describes the syntheses of [2]rotaxanes comprising 23- and 26-membered biphenyl crown ethers as the macrocyclic components and secondary ammonium ions as the dumbbell-shaped components, and the locking of the dynamic axial chirality of the biphenyl moieties in these structures. Chiral high-performance liquid chromatography (HPLC) revealed that our [2]rotaxane featuring the 26-membered crown ether racemized at room temperature, but the racemization of the [2]rotaxane featuring the 23-membered crown ether did not proceed at room temperature over a period of three days. After separation of the enantiomers of the [2]rotaxane incorporating the 23-membered crown ether through chiral HPLC, we studied its racemization at elevated temperature. The rate of stereoinversion in dimethylsulfoxide (a polar solvent) was faster than that in o-dichlorobenzene (a nonpolar solvent), and herein we discuss these kinetic parameters.
Collapse
Affiliation(s)
- Tomoya Kimura
- Department of Materials Science and Engineering, Faculty of Engineering, University of Fukui, Bunkyo, Fukui, 910-8507, Japan
| | - Shinobu Miyagawa
- Department of Materials Science and Engineering, Faculty of Engineering, University of Fukui, Bunkyo, Fukui, 910-8507, Japan
| | - Hikaru Takaya
- International Research Center for Elements Science, Institute for Chemical Research, Kyoto University, Uji, 611-0011, Japan.,Institute for Molecular Science, National Institute of Natural Science, Okazaki, 444-8585, Japan
| | - Masaya Naito
- Department of Materials Science and Engineering, Faculty of Engineering, University of Fukui, Bunkyo, Fukui, 910-8507, Japan
| | - Yuji Tokunaga
- Department of Materials Science and Engineering, Faculty of Engineering, University of Fukui, Bunkyo, Fukui, 910-8507, Japan
| |
Collapse
|
70
|
Saito A, Sawada T, Fujita M. X-ray Crystallographic Observation of Chiral Transformations within a Metal-Peptide Pore. Angew Chem Int Ed Engl 2020; 59:20367-20370. [PMID: 32720456 DOI: 10.1002/anie.202007731] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2020] [Indexed: 01/12/2023]
Abstract
Porous metal complexes enable single-crystal X-ray crystallographic observation of included guests or reaction intermediates through simple soaking with the guests/substrates. Previous studies on this technique have often encountered difficulties in the observation of chiral structures because the host frameworks had no chirality. We synthesized a new metal-peptide porous complex through a folding-and-assembly strategy and utilized the chiral pore for trapping chiral guests. Chiral alcohols and ketones were successfully included within the pore. Crystallographic analyses clearly revealed not only their chemical structures but also chiral transformation events within the pore such as fixed conformations or an unstable hemiacetal formation.
Collapse
Affiliation(s)
- Ami Saito
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
| | - Tomohisa Sawada
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
| | - Makoto Fujita
- Department of Applied Chemistry, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan.,Division of Advanced Molecular Science, Institute for Molecular Science, National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji-cho, Okazaki, Aichi, 444-8787, Japan
| |
Collapse
|
71
|
Lehr M, Paschelke T, Trumpf E, Vogt A, Näther C, Sönnichsen FD, McConnell AJ. A Paramagnetic NMR Spectroscopy Toolbox for the Characterisation of Paramagnetic/Spin-Crossover Coordination Complexes and Metal-Organic Cages. Angew Chem Int Ed Engl 2020; 59:19344-19351. [PMID: 33448544 PMCID: PMC7590057 DOI: 10.1002/anie.202008439] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Indexed: 12/14/2022]
Abstract
The large paramagnetic shifts and short relaxation times resulting from the presence of a paramagnetic centre complicate NMR data acquisition and interpretation in solution. As a result, NMR analysis of paramagnetic complexes is limited in comparison to diamagnetic compounds and often relies on theoretical models. We report a toolbox of 1D (1H, proton-coupled 13C, selective 1H-decoupling 13C, steady-state NOE) and 2D (COSY, NOESY, HMQC) paramagnetic NMR methods that enables unprecedented structural characterisation and in some cases, provides more structural information than would be observable for a diamagnetic analogue. We demonstrate the toolbox's broad versatility for fields from coordination chemistry and spin-crossover complexes to supramolecular chemistry through the characterisation of CoII and high-spin FeII mononuclear complexes as well as a Co4L6 cage.
Collapse
Affiliation(s)
- Marc Lehr
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| | - Tobias Paschelke
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| | - Eicke Trumpf
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| | - Anna‐Marlene Vogt
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| | - Christian Näther
- Institute of Inorganic ChemistryChristian-Albrechts-Universität zu KielMax-Eyth-Straße 2Kiel24118Germany
| | - Frank D. Sönnichsen
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| | - Anna J. McConnell
- Otto Diels Institute of Organic ChemistryChristian-Albrechts-Universität zu KielOtto-Hahn-Platz 4Kiel24098Germany
| |
Collapse
|
72
|
Dang LL, Feng HJ, Lin YJ, Jin GX. Self-Assembly of Molecular Figure-Eight Knots Induced by Quadruple Stacking Interactions. J Am Chem Soc 2020; 142:18946-18954. [DOI: 10.1021/jacs.0c09162] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Li-Long Dang
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Hui-Jun Feng
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Yue-Jian Lin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| |
Collapse
|
73
|
Wang Z, He L, Liu B, Zhou LP, Cai LX, Hu SJ, Li XZ, Li Z, Chen T, Li X, Sun QF. Coordination-Assembled Water-Soluble Anionic Lanthanide Organic Polyhedra for Luminescent Labeling and Magnetic Resonance Imaging. J Am Chem Soc 2020; 142:16409-16419. [PMID: 32882131 DOI: 10.1021/jacs.0c07514] [Citation(s) in RCA: 65] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Lanthanide-containing functional complexes have found a variety of applications in materials science and biomedicine because of their unique electroptical and magnetic properties. However, the poor stability and solubility in water of multicomponent lanthanide organic assemblies significantly limit their practical applications. We report here a series of water-stable anionic Ln2nL3n-type (n = 2, 3, 4, and 5) lanthanide organic polyhedra (LOPs) constructed by deprotonation self-assembly of three fully conjugated ligands (H4L1 and H4L2a/b) featuring a 2,6-pyridine bitetrazolate chelating moiety. The outcomes of the LOPs formation reactions were found to be very sensitive toward the reaction conditions including base, metal source, solvents, and concentrations as characterized by a combination of NMR, high-resolution ESI-MS and X-ray crystallography. Ligands H4L2a/b manifested an excellent sensitization toward lanthanide ions (Ln = EuIII and TbIII), with high luminescent quantum yields for Tb8L2a12 (Φ = 11.2% in water) and Eu8L2b12 (Φ = 76.8% in DMSO) measured in polar solvents. Furthermore, due to the giant molecular weight and rigidity of the polyhedral skeleton, Gd8L2b12 showed a very high longitudinal relaxivity (r1) of 400.53 mM-1S-1. The performance of Gd8L2b12 as potential magnetic resonance imaging contrast agents (CAs) in vivo was evaluated with much longer retention time in the tumor sites compared with the commercial GdIII-based CAs. Dual-modal imaging potential has also been demonstrated with the mixed Eu/Gd LOPs. Our results not only provide a new design route toward water-stable multinuclear lanthanide organic assemblies but also offer potential candidates of supramolecular-edifices for bioimaging and drug delivery.
Collapse
Affiliation(s)
- Zhuo Wang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Lizhen He
- Department of Chemistry, Jinan University, Guangzhou 510632, P. R. China
| | - Bingqing Liu
- Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Li-Peng Zhou
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Li-Xuan Cai
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Shao-Jun Hu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Xiao-Zhen Li
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China
| | - Zhikai Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518055, P. R. China
| | - Tianfeng Chen
- Department of Chemistry, Jinan University, Guangzhou 510632, P. R. China
| | - Xiaopeng Li
- Department of Chemistry, University of South Florida, Tampa, Florida 33620, United States
| | - Qing-Fu Sun
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| |
Collapse
|
74
|
O'Keeffe M, Treacy MMJ. Isogonal weavings on the sphere: knots, links, polycatenanes. Acta Crystallogr A Found Adv 2020; 76:611-621. [PMID: 32869759 DOI: 10.1107/s2053273320010669] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 08/03/2020] [Indexed: 12/20/2022] Open
Abstract
Mathematical knots and links are described as piecewise linear - straight, non-intersecting sticks meeting at corners. Isogonal structures have all corners related by symmetry (`vertex'-transitive). Corner- and stick-transitive structures are termed regular. No regular knots are found. Regular links are cubic or icosahedral and a complete account of these (36 in number) is given, including optimal (thickest-stick) embeddings. Stick 2-transitive isogonal structures are again cubic and icosahedral and also encompass the infinite family of torus knots and links. The major types of these structures are identified and reported with optimal embeddings. The relevance of this work to materials chemistry and biochemistry is noted.
Collapse
Affiliation(s)
- Michael O'Keeffe
- School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, USA
| | - Michael M J Treacy
- Department of Physics, Arizona State University, Tempe, Arizona 85287, USA
| |
Collapse
|
75
|
Saito A, Sawada T, Fujita M. X‐ray Crystallographic Observation of Chiral Transformations within a Metal–Peptide Pore. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202007731] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Ami Saito
- Department of Applied Chemistry School of Engineering The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan
| | - Tomohisa Sawada
- Department of Applied Chemistry School of Engineering The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan
| | - Makoto Fujita
- Department of Applied Chemistry School of Engineering The University of Tokyo 7-3-1 Hongo, Bunkyo-ku Tokyo 113-8656 Japan
- Division of Advanced Molecular Science Institute for Molecular Science National Institutes of Natural Sciences 5-1 Higashiyama, Myodaiji-cho Okazaki Aichi 444-8787 Japan
| |
Collapse
|
76
|
Lehr M, Paschelke T, Trumpf E, Vogt A, Näther C, Sönnichsen FD, McConnell AJ. Ein Methodenrepertoire für die paramagnetische NMR‐Spektroskopie zur Charakterisierung von paramagnetischen/Spin‐Crossover‐ Komplexen und Metall‐organischen Käfigverbindungen. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202008439] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Marc Lehr
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| | - Tobias Paschelke
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| | - Eicke Trumpf
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| | - Anna‐Marlene Vogt
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| | - Christian Näther
- Institut für Anorganische Chemie Christian-Albrechts-Universität zu Kiel Max-Eyth-Straße 2 Kiel 24118 Deutschland
| | - Frank D. Sönnichsen
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| | - Anna J. McConnell
- Otto-Diels-Institut für Organische Chemie Christian-Albrechts-Universität zu Kiel Otto-Hahn-Platz 4 Kiel 24098 Deutschland
| |
Collapse
|
77
|
|
78
|
|
79
|
Lu Y, Liu D, Lin YJ, Li ZH, Jin GX. Self-assembly of metalla[3]catenanes, Borromean rings and ring-in-ring complexes using a simple π-donor unit. Natl Sci Rev 2020; 7:1548-1556. [PMID: 34691487 PMCID: PMC8290965 DOI: 10.1093/nsr/nwaa164] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Revised: 04/24/2020] [Accepted: 05/05/2020] [Indexed: 12/21/2022] Open
Abstract
Despite extensive research and several stunning breakthroughs in the synthesis of interlocked molecular species, [3]catenanes, Borromean rings and ring-in-ring complexes are exceedingly rare and their targeted synthesis remains a formidable challenge. Herein, a series of Cp*Rh-based homogeneous and heterogeneous interlocked structures have been prepared by coordination-driven self-assembly, not only including metalla[2]catenanes and molecular Borromean rings, but also linear metalla[3]catenanes and ring-in-ring complexes. The interlocked structures are all based on bithiophenyl groups. The bithiophenyl groups effectively enhance the strength of the inter-ring interactions and play a crucial role in the formation of these interlocked structures. By taking advantage of the strong interaction between π-donor (D) and π-acceptor (A) groups, the electron-deficient methylviologen cation was introduced into a cationic metallarectangle based on bithiophenyl groups. Taking inspiration from these results, a cationic metallarectangle based on A units was threaded into a metallarectangle based on D units, leading to a heterogeneous D–A ring-in-ring structure.
Collapse
Affiliation(s)
- Ye Lu
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200438, China
| | - Dong Liu
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200438, China
| | - Yue-Jian Lin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200438, China
| | - Zhen-Hua Li
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200438, China
| | - Guo-Xin Jin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, Shanghai 200438, China
| |
Collapse
|
80
|
Dang LL, Gao X, Lin YJ, Jin GX. Selective synthesis and structural transformation between a molecular ring-in-ring architecture and an abnormal trefoil knot. Chem Sci 2020; 11:8013-8019. [PMID: 34094170 PMCID: PMC8163296 DOI: 10.1039/d0sc02733b] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Accepted: 07/15/2020] [Indexed: 11/21/2022] Open
Abstract
The synthesis of complicated supramolecular architectures and the study of their reversible structural transformations remains a fascinating challenge in the field of supramolecular chemistry. Herein, two types of novel coordination compounds, a non-intertwined ring-in-ring assembly and an abnormal trefoil knot were constructed from a strategically selected Cp*Rh building block and a semi-rigid N,N'-bis(4-pyridylmethyl)diphthalic diimide ligand via coordination-driven self-assembly. Remarkably, the reversible transformation between the abnormal trefoil knot and the ring-in-ring assembly or the corresponding tetranuclear macrocycle could be achieved by the synergistic effects of Ag+ ion coordination and alteration of the solvent. Single-crystal X-ray crystallographic data and NMR spectroscopic experiments support the structural assignments.
Collapse
Affiliation(s)
- Li-Long Dang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Fudan University Shanghai 200438 P. R. China
| | - Xiang Gao
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Fudan University Shanghai 200438 P. R. China
| | - Yue-Jian Lin
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Fudan University Shanghai 200438 P. R. China
| | - Guo-Xin Jin
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Fudan University Shanghai 200438 P. R. China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences Shanghai 200032 P. R. China
| |
Collapse
|
81
|
Costil R, Crespi S, Pfeifer L, Feringa BL. Modulation of a Supramolecular Figure-of-Eight Strip Based on a Photoswitchable Stiff-Stilbene. Chemistry 2020; 26:7783-7787. [PMID: 32343010 PMCID: PMC7384132 DOI: 10.1002/chem.202002051] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2020] [Indexed: 01/18/2023]
Abstract
The preparation, assembly and dynamic properties of photoswitchable bisphosphine ligands based on the stiff-stilbene scaffold are reported. Directional bonding and coordination-induced assembly allow complexation of these ligands with palladium(II), resulting in the formation of discrete metallo-supramolecular entities. While the Z isomer forms a simple bidentate metallo-macrocycle, an intricate double helicate figure-of-eight dimer is observed with the E ligand. Topologically 3D complexes can thus be obtained from 2D ligands. Upon irradiation with UV light, isomerization of the ligands allows control of the architecture of the formed complexes, resulting in a light-triggered modulation of the supramolecular topology. Furthermore, a mechanistic investigation unveiled the dynamic nature of the helicate chirality, where a transmission of motion from the palladium centers yields an "eight-to-eight" inversion.
Collapse
Affiliation(s)
- Romain Costil
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Stefano Crespi
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Lukas Pfeifer
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| | - Ben L. Feringa
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of GroningenNijenborgh 49747AGGroningenThe Netherlands
| |
Collapse
|
82
|
Gao WX, Feng HJ, Guo BB, Lu Y, Jin GX. Coordination-Directed Construction of Molecular Links. Chem Rev 2020; 120:6288-6325. [PMID: 32558562 DOI: 10.1021/acs.chemrev.0c00321] [Citation(s) in RCA: 170] [Impact Index Per Article: 42.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Since the emergence of the concept of chemical topology, interlocked molecular assemblies have graduated from academic curiosities and poorly defined species to become synthetic realities. Coordination-directed synthesis provides powerful, diverse, and increasingly sophisticated protocols for accessing interlocked molecules. Originally, metal ions were employed solely as templates to gather and position building blocks in entwined or threaded arrangements. Recently, metal centers have increasingly featured within the backbones of the integral structural elements, which in turn use noncovalent interactions to self-assemble into intricate topologies. By outlining ingenious recent examples as well as seminal classic cases, this Review focuses on the role of metal-ligand paradigms in assembling molecular links. In addition, the ever-evolving approaches to efficient assembly, the structural features of the resulting architectures, and their prospects for the future are also presented.
Collapse
Affiliation(s)
- Wen-Xi Gao
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Hui-Jun Feng
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Bei-Bei Guo
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Ye Lu
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| | - Guo-Xin Jin
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, State Key Laboratory of Molecular Engineering of Polymers, Department of Chemistry, Fudan University, Shanghai 200433, P. R. China
| |
Collapse
|
83
|
Lewis JEM, Crowley JD. Metallo‐Supramolecular Self‐Assembly with Reduced‐Symmetry Ligands. Chempluschem 2020; 85:815-827. [DOI: 10.1002/cplu.202000153] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Revised: 04/10/2020] [Indexed: 12/20/2022]
Affiliation(s)
- James E. M. Lewis
- Department of ChemistryImperial College LondonMolecular Sciences Research Hub 80 Wood Lane London W12 0BZ United Kingdom
| | - James. D. Crowley
- Department of ChemistryUniversity of Otago PO Box 56 Dunedin 9054 New Zealand
| |
Collapse
|
84
|
Lewis JE. Knotting to See Here. Chem 2020. [DOI: 10.1016/j.chempr.2019.12.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|