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Eikelboom JAJ, de Knegt HJ, Klaver M, van Langevelde F, van der Wal T, Prins HHT. Inferring an animal's environment through biologging: quantifying the environmental influence on animal movement. MOVEMENT ECOLOGY 2020; 8:40. [PMID: 33088572 PMCID: PMC7574229 DOI: 10.1186/s40462-020-00228-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Accepted: 10/12/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Animals respond to environmental variation by changing their movement in a multifaceted way. Recent advancements in biologging increasingly allow for detailed measurements of the multifaceted nature of movement, from descriptors of animal movement trajectories (e.g., using GPS) to descriptors of body part movements (e.g., using tri-axial accelerometers). Because this multivariate richness of movement data complicates inference on the environmental influence on animal movement, studies generally use simplified movement descriptors in statistical analyses. However, doing so limits the inference on the environmental influence on movement, as this requires that the multivariate richness of movement data can be fully considered in an analysis. METHODS We propose a data-driven analytic framework, based on existing methods, to quantify the environmental influence on animal movement that can accommodate the multifaceted nature of animal movement. Instead of fitting a simplified movement descriptor to a suite of environmental variables, our proposed framework centres on predicting an environmental variable from the full set of multivariate movement data. The measure of fit of this prediction is taken to be the metric that quantifies how much of the environmental variation relates to the multivariate variation in animal movement. We demonstrate the usefulness of this framework through a case study about the influence of grass availability and time since milking on cow movements using machine learning algorithms. RESULTS We show that on a one-hour timescale 37% of the variation in grass availability and 33% of time since milking influenced cow movements. Grass availability mostly influenced the cows' neck movement during grazing, while time since milking mostly influenced the movement through the landscape and the shared variation of accelerometer and GPS data (e.g., activity patterns). Furthermore, this framework proved to be insensitive to spurious correlations between environmental variables in quantifying the influence on animal movement. CONCLUSIONS Not only is our proposed framework well-suited to study the environmental influence on animal movement; we argue that it can also be applied in any field that uses multivariate biologging data, e.g., animal physiology, to study the relationships between animals and their environment. SUPPLEMENTARY INFORMATION Supplementary information accompanies this paper at 10.1186/s40462-020-00228-4.
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Affiliation(s)
- J. A. J. Eikelboom
- Wildlife Ecology and Conservation Group, Wageningen University and Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
| | - H. J. de Knegt
- Wildlife Ecology and Conservation Group, Wageningen University and Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
| | - M. Klaver
- Wildlife Ecology and Conservation Group, Wageningen University and Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
| | - F. van Langevelde
- Wildlife Ecology and Conservation Group, Wageningen University and Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
- School of Life Sciences, Westville Campus, University of KwaZulu-Natal, Durban, 4000 South Africa
| | - T. van der Wal
- Spatial Knowledge Systems, Wageningen Environmental Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
| | - H. H. T. Prins
- Wildlife Ecology and Conservation Group, Wageningen University and Research, Droevendaalsesteeg 3a, 6708 PB Wageningen, Netherlands
- Department of Animal Sciences, Wageningen University and Research, De Elst 1, 6708 WD Wageningen, Netherlands
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Milner JE, Blackwell PG, Niu M. Modelling and inference for the movement of interacting animals. Methods Ecol Evol 2020. [DOI: 10.1111/2041-210x.13468] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jordan E. Milner
- School of Mathematics & Statistics University of Sheffield Sheffield UK
| | - Paul G. Blackwell
- School of Mathematics & Statistics University of Sheffield Sheffield UK
| | - Mu Niu
- School of Computing, Electronics and Mathematics University of Plymouth Plymouth UK
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Fast behavioral feedbacks make ecosystems sensitive to pace and not just magnitude of anthropogenic environmental change. Proc Natl Acad Sci U S A 2020; 117:25580-25589. [PMID: 32989156 DOI: 10.1073/pnas.2003301117] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
Anthropogenic environmental change is altering the behavior of animals in ecosystems around the world. Although behavior typically occurs on much faster timescales than demography, it can nevertheless influence demographic processes. Here, we use detailed data on behavior and empirical estimates of demography from a coral reef ecosystem to develop a coupled behavioral-demographic ecosystem model. Analysis of the model reveals that behavior and demography feed back on one another to determine how the ecosystem responds to anthropogenic forcing. In particular, an empirically observed feedback between the density and foraging behavior of herbivorous fish leads to alternative stable ecosystem states of coral population persistence or collapse (and complete algal dominance). This feedback makes the ecosystem more prone to coral collapse under fishing pressure but also more prone to recovery as fishing is reduced. Moreover, because of the behavioral feedback, the response of the ecosystem to changes in fishing pressure depends not only on the magnitude of changes in fishing but also on the pace at which changes are imposed. For example, quickly increasing fishing to a given level can collapse an ecosystem that would persist under more gradual change. Our results reveal conditions under which the pace and not just the magnitude of external forcing can dictate the response of ecosystems to environmental change. More generally, our multiscale behavioral-demographic framework demonstrates how high-resolution behavioral data can be incorporated into ecological models to better understand how ecosystems will respond to perturbations.
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Consistent differences in a virtual world model of ape societies. Sci Rep 2020; 10:14075. [PMID: 32826938 PMCID: PMC7442632 DOI: 10.1038/s41598-020-70955-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Accepted: 08/06/2020] [Indexed: 11/20/2022] Open
Abstract
Practical and ethical constraints limit our ability to experimentally test socioecological theory in wild primates. We took an alternate approach to model this, allowing groups of humans to interact in a virtual world in which they had to find food and interact with both ingroup and outgroup avatars to earn rewards. We altered ratios and distributions of high- and low-value foods to test the hypothesis that hominoids vary with regards to social cohesion and intergroup tolerance due to their feeding ecology. We found larger nesting clusters and decreased attacks on outgroup competitors in the Bonobo condition versus the Chimpanzee condition, suggesting a significant effect of feeding competition alone on social structure. We also demonstrate that virtual worlds are a robust mechanism for testing hypotheses that are impossible to study in the wild.
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55
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Tattersall GJ, Danner RM, Chaves JA, Levesque DL. Activity analysis of thermal imaging videos using a difference imaging approach. J Therm Biol 2020; 91:102611. [PMID: 32716861 DOI: 10.1016/j.jtherbio.2020.102611] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Revised: 04/16/2020] [Accepted: 04/26/2020] [Indexed: 01/02/2023]
Abstract
Infrared thermal imaging is a passive imaging technique that captures the emitted radiation from an object to estimate surface temperature, often for inference of heat transfer. Infrared thermal imaging offers the potential to detect movement without the challenges of glare, shadows, or changes in lighting associated with visual digital imaging or active infrared imaging. In this paper, we employ a frame subtraction algorithm for extracting the pixel-by-pixel relative change in signal from a fixed focus video file, tailored for use with thermal imaging videos. By summing the absolute differences across an entire video, we are able to assign quantitative activity assessments to thermal imaging data for comparison with simultaneous recordings of metabolic rates. We tested the accuracy and limits of this approach by analyzing movement of a metronome and provide an example application of the approach to a study of Darwin's finches. In principle, this "Difference Imaging Thermography" (DIT) would allow for activity data to be standardized to energetic measurements and could be applied to any radiometric imaging system.
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Affiliation(s)
- Glenn J Tattersall
- Department of Biological Sciences, Brock University, St. Catharines, ON, L2S3A1, Canada.
| | - Raymond M Danner
- Department of Biology and Marine Biology, University of North Carolina Wilmington, 601 S. College Rd, Wilmington, NC, 28403, USA
| | - Jaime A Chaves
- Colegio de Ciencias Biológicas y Ambientales, Campus Cumbayá, Universidad San Francisco de Quito, Diego de Robles y Av. Interoceánica, Cumbayá, Quito, Ecuador; Department of Biology, San Francisco State University, 1600 Holloway Ave, San Francisco, CA, 94132, USA
| | - Danielle L Levesque
- Institute of Biodiversity and Environmental Conservation, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, Malaysia; School of Biology and Ecology, University of Maine, Orono, ME, USA
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The Australian Roadkill Reporting Project-Applying Integrated Professional Research and Citizen Science to Monitor and Mitigate Roadkill in Australia. Animals (Basel) 2020; 10:ani10071112. [PMID: 32610525 PMCID: PMC7401535 DOI: 10.3390/ani10071112] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 06/19/2020] [Accepted: 06/24/2020] [Indexed: 11/18/2022] Open
Abstract
Simple Summary Australia has no database of national roadkill. The current research project fills that knowledge gap by developing a roadkill reporting application that enables professional and citizen scientists to record photographs of roadkill with location, time and date. This embodies the concept of ‘One Welfare’ as it affects humans, animals and the environment. Uploaded to a website, these data can identify roadkill hotspots, tabulate species of animals killed and potentially be used for ecological studies of roadkill numbers, species distribution, population trends, animal behaviour and disease. Initial results indicate that mammal roadkill mostly occurs at night and that of birds and reptiles during daytime. Mammals make up three-quarters of the roadkill recorded and this includes endangered species. Two examples of roadkill hotspots are shown in Queensland and Tasmania. These will enable further research to suggest how roadkill mitigation measures may be optimally employed. Abstract Australia has no national roadkill monitoring scheme. To address this gap in knowledge, a roadkill reporting application (app) was developed to allow members of the public to join professional researchers in gathering Australian data. The app is used to photograph roadkill and simultaneously records the GPS location, time and date. These data are uploaded immediately to a website for data management. To illustrate the capacity to facilitate cost-effective mitigation measures the article focuses on two roadkill hotspots—in Queensland and Tasmania. In total, 1609 reports were gathered in the first three months of the project. They include data on mammals (n = 1203, 75%), birds (n = 125, 7.8%), reptiles (n = 79, 4.9%), amphibians (n = 4, 0.025%), unidentified (n = 189, 11.8%) and unserviceable ones (n = 9). A significant finding is variance in the distribution of mammals and birds at different times of day. These findings reflect diurnal variation in the activity levels of different species and underline the need for data on a targeted species to be collected at appropriate times of day. By continuing to facilitate roadkill monitoring, it is anticipated that the data generated by the app will directly increase knowledge of roadkill numbers and hotspots. Indirectly, it will provide value-added information on animal behaviour, disease and population dynamics as well as for species distribution mapping.
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Francisco FA, Nührenberg P, Jordan A. High-resolution, non-invasive animal tracking and reconstruction of local environment in aquatic ecosystems. MOVEMENT ECOLOGY 2020; 8:27. [PMID: 32582448 PMCID: PMC7310323 DOI: 10.1186/s40462-020-00214-w] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2020] [Accepted: 05/26/2020] [Indexed: 05/19/2023]
Abstract
BACKGROUND Acquiring high resolution quantitative behavioural data underwater often involves installation of costly infrastructure, or capture and manipulation of animals. Aquatic movement ecology can therefore be limited in taxonomic range and ecological coverage. METHODS Here we present a novel deep-learning based, multi-individual tracking approach, which incorporates Structure-from-Motion in order to determine the 3D location, body position and the visual environment of every recorded individual. The application is based on low-cost cameras and does not require the animals to be confined, manipulated, or handled in any way. RESULTS Using this approach, single individuals, small heterospecific groups and schools of fish were tracked in freshwater and marine environments of varying complexity. Positional tracking errors as low as 1.09 ± 0.47 cm (RSME) in underwater areas up to 500 m2 were recorded. CONCLUSIONS This cost-effective and open-source framework allows the analysis of animal behaviour in aquatic systems at an unprecedented resolution. Implementing this versatile approach, quantitative behavioural analysis can be employed in a wide range of natural contexts, vastly expanding our potential for examining non-model systems and species.
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Affiliation(s)
- Fritz A Francisco
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Collective Behavior, Max Planck Institute of Animal Behavior, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Biology, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
| | - Paul Nührenberg
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Collective Behavior, Max Planck Institute of Animal Behavior, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Biology, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
| | - Alex Jordan
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Collective Behavior, Max Planck Institute of Animal Behavior, Universitätsstraße 10, Konstanz, 78457 Germany
- Department of Biology, University of Konstanz, Universitätsstraße 10, Konstanz, 78457 Germany
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58
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Gelardi V, Godard J, Paleressompoulle D, Claidiere N, Barrat A. Measuring social networks in primates: wearable sensors versus direct observations. Proc Math Phys Eng Sci 2020; 476:20190737. [PMID: 32398933 PMCID: PMC7209153 DOI: 10.1098/rspa.2019.0737] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 01/28/2020] [Indexed: 11/12/2022] Open
Abstract
Network analysis represents a valuable and flexible framework to understand the structure of individual interactions at the population level in animal societies. The versatility of network representations is moreover suited to different types of datasets describing these interactions. However, depending on the data collection method, different pictures of the social bonds between individuals could a priori emerge. Understanding how the data collection method influences the description of the social structure of a group is thus essential to assess the reliability of social studies based on different types of data. This is however rarely feasible, especially for animal groups, where data collection is often challenging. Here, we address this issue by comparing datasets of interactions between primates collected through two different methods: behavioural observations and wearable proximity sensors. We show that, although many directly observed interactions are not detected by the sensors, the global pictures obtained when aggregating the data to build interaction networks turn out to be remarkably similar. Moreover, sensor data yield a reliable social network over short time scales and can be used for long-term studies, showing their important potential for detailed studies of the evolution of animal social groups.
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Affiliation(s)
- Valeria Gelardi
- Aix Marseille Univ, Université de Toulon, CNRS, CPT, Turing Center for Living Systems, Marseille, France
| | - Jeanne Godard
- Aix Marseille Univ, CNRS, LPC, FED3C, Marseille, France
| | | | | | - Alain Barrat
- Aix Marseille Univ, Université de Toulon, CNRS, CPT, Turing Center for Living Systems, Marseille, France
- ISI Foundation, Turin, Italy
- Tokyo Tech World Research Hub Initiative (WRHI), Institute of Innovative Research, Tokyo Institute of Technology, Japan
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59
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Ripperger SP, Carter GG, Page RA, Duda N, Koelpin A, Weigel R, Hartmann M, Nowak T, Thielecke J, Schadhauser M, Robert J, Herbst S, Meyer-Wegener K, Wägemann P, Schröder-Preikschat W, Cassens B, Kapitza R, Dressler F, Mayer F. Thinking small: Next-generation sensor networks close the size gap in vertebrate biologging. PLoS Biol 2020; 18:e3000655. [PMID: 32240158 PMCID: PMC7117662 DOI: 10.1371/journal.pbio.3000655] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 02/24/2020] [Indexed: 12/22/2022] Open
Abstract
Recent advances in animal tracking technology have ushered in a new era in biologging. However, the considerable size of many sophisticated biologging devices restricts their application to larger animals, whereas older techniques often still represent the state-of-the-art for studying small vertebrates. In industrial applications, low-power wireless sensor networks (WSNs) fulfill requirements similar to those needed to monitor animal behavior at high resolution and at low tag mass. We developed a wireless biologging network (WBN), which enables simultaneous direct proximity sensing, high-resolution tracking, and long-range remote data download at tag masses of 1 to 2 g. Deployments to study wild bats created social networks and flight trajectories of unprecedented quality. Our developments highlight the vast capabilities of WBNs and their potential to close an important gap in biologging: fully automated tracking and proximity sensing of small animals, even in closed habitats, at high spatial and temporal resolution.
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Affiliation(s)
- Simon P. Ripperger
- Museum für Naturkunde–Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
- Smithsonian Tropical Research Institute, Ancón, Republic of Panama
- Department of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, Ohio, United States of America
| | - Gerald G. Carter
- Smithsonian Tropical Research Institute, Ancón, Republic of Panama
- Department of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, Ohio, United States of America
| | - Rachel A. Page
- Smithsonian Tropical Research Institute, Ancón, Republic of Panama
| | - Niklas Duda
- Institute for Electronics Engineering, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany
| | - Alexander Koelpin
- Chair for Electronics and Sensor Systems, Brandenburg University of Technology, Cottbus, Germany
| | - Robert Weigel
- Institute for Electronics Engineering, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany
| | - Markus Hartmann
- Institute of Information Technology (Communication Electronics) LIKE, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen-Tennenlohe, Germany
| | - Thorsten Nowak
- Institute of Information Technology (Communication Electronics) LIKE, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen-Tennenlohe, Germany
| | - Jörn Thielecke
- Institute of Information Technology (Communication Electronics) LIKE, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen-Tennenlohe, Germany
| | - Michael Schadhauser
- Institute of Information Technology (Communication Electronics) LIKE, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen-Tennenlohe, Germany
| | - Jörg Robert
- Institute of Information Technology (Communication Electronics) LIKE, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen-Tennenlohe, Germany
| | - Sebastian Herbst
- Department of Computer Science, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany
| | - Klaus Meyer-Wegener
- Department of Computer Science, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany
| | - Peter Wägemann
- Department of Computer Science, Friedrich-Alexander University Erlangen-Nürnberg (FAU), Erlangen, Germany
| | | | - Björn Cassens
- Carl-Friedrich-Gauß-Fakultät, Technische Universität Braunschweig, Braunschweig, Germany
| | - Rüdiger Kapitza
- Carl-Friedrich-Gauß-Fakultät, Technische Universität Braunschweig, Braunschweig, Germany
| | - Falko Dressler
- Heinz Nixdorf Institute and Dept. of Computer Science, Paderborn University, Paderborn, Germany
| | - Frieder Mayer
- Museum für Naturkunde–Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research, Berlin, Germany
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60
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Song W, Song W, Gu H, Li F. Progress in the Remote Sensing Monitoring of the Ecological Environment in Mining Areas. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:E1846. [PMID: 32178376 PMCID: PMC7142410 DOI: 10.3390/ijerph17061846] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2019] [Revised: 03/10/2020] [Accepted: 03/10/2020] [Indexed: 11/20/2022]
Abstract
Based on the results of an extensive literature research, we summarize the research progress of remote sensing monitoring in terms of identifying mining area boundaries and monitoring land use or land cover changes of mining areas. We also analyze the application of remote sensing in monitoring the biodiversity, landscape structure, vegetation change, soil environment, surface runoff conditions, and the atmospheric environment in mining areas and predict the prospects of remote sensing in monitoring the ecological environment in mining areas. Based on the results, the accurate classification of land use or land cover and the accurate extraction of environmental factors are the basis for remote sensing monitoring of the ecological environment in mining areas. In terms of the extraction of ecological factors, vegetation extraction is relatively advanced in contrast to the extraction of animal and microbial data. For the monitoring of environmental conditions of mining areas, sophisticated methods are available to identify pollution levels of vegetation and to accurately monitor soil quality. However, the methods for water and air pollution monitoring in mining areas still need to be improved. These limitations considerably impede the application of remote sensing monitoring in mining areas. The solving of these problems depends on the progress of multi-source remote sensing data and stereoscopic monitoring techniques.
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Affiliation(s)
- Wen Song
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China;
- College of Mining Engineering, North China University of Science and Technology, Tangshan 063210, China; (H.G.); (F.L.)
| | - Wei Song
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China;
| | - Haihong Gu
- College of Mining Engineering, North China University of Science and Technology, Tangshan 063210, China; (H.G.); (F.L.)
- Hebei Key Laboratory of Mining Development and Security Technology, Tangshan 063210, China
- Hebei Industrial Technology Institute of Mine Ecological Remediation, Tangshan 063210, China
| | - Fuping Li
- College of Mining Engineering, North China University of Science and Technology, Tangshan 063210, China; (H.G.); (F.L.)
- Hebei Key Laboratory of Mining Development and Security Technology, Tangshan 063210, China
- Hebei Industrial Technology Institute of Mine Ecological Remediation, Tangshan 063210, China
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Henninger J, Krahe R, Sinz F, Benda J. Tracking activity patterns of a multispecies community of gymnotiform weakly electric fish in their neotropical habitat without tagging. J Exp Biol 2020; 223:jeb206342. [PMID: 31937524 DOI: 10.1242/jeb.206342] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Accepted: 01/06/2020] [Indexed: 01/06/2023]
Abstract
Field studies on freely behaving animals commonly require tagging and often are focused on single species. Weakly electric fish generate a species- and individual-specific electric organ discharge (EOD) and therefore provide a unique opportunity for individual tracking without tagging. Here, we present and test tracking algorithms based on recordings with submerged electrode arrays. Harmonic structures extracted from power spectra provide fish identity. Localization of fish based on weighted averages of their EOD amplitudes is found to be more robust than fitting a dipole model. We apply these techniques to monitor a community of three species, Apteronotus rostratus, Eigenmannia humboldtii and Sternopygus dariensis, in their natural habitat in Darién, Panama. We found consistent upstream movements after sunset followed by downstream movements in the second half of the night. Extrapolations of these movements and estimates of fish density obtained from additional transect data suggest that some fish cover at least several hundreds of meters of the stream per night. Most fish, including E. humboldtii, were traversing the electrode array solitarily. From in situ measurements of the decay of the EOD amplitude with distance of individual animals, we estimated that fish can detect conspecifics at distances of up to 2 m. Our recordings also emphasize the complexity of natural electrosensory scenes resulting from the interactions of the EODs of different species. Electrode arrays thus provide an unprecedented window into the so-far hidden nocturnal activities of multispecies communities of weakly electric fish at an unmatched level of detail.
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Affiliation(s)
- Jörg Henninger
- Institut für Neurobiologie, Eberhard Karls Universität, 72076 Tübingen, Germany
| | - Rüdiger Krahe
- Institut für Biologie, Humboldt-Universität zu Berlin, Philippstr. 13, 10115 Berlin, Germany
- McGill University, Department of Biology, 1205 Ave. Docteur Penfield, Montreal, Quebec, Canada, H3A 1B1
| | - Fabian Sinz
- Bernstein Center for Computational Neuroscience, Eberhard Karls Universität, 72076 Tübingen, Germany
- Institut für Informatik, Eberhard Karls Univzersität, 72076 Tübingen, Germany
- Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX 77030, USA
| | - Jan Benda
- Institut für Neurobiologie, Eberhard Karls Universität, 72076 Tübingen, Germany
- Bernstein Center for Computational Neuroscience, Eberhard Karls Universität, 72076 Tübingen, Germany
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Barkley AN, Broell F, Pettitt‐Wade H, Watanabe YY, Marcoux M, Hussey NE. A framework to estimate the likelihood of species interactions and behavioural responses using animal‐borne acoustic telemetry transceivers and accelerometers. J Anim Ecol 2020; 89:146-160. [DOI: 10.1111/1365-2656.13156] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Accepted: 11/02/2019] [Indexed: 01/23/2023]
Affiliation(s)
- Amanda N. Barkley
- Department of Integrative Biology University of Windsor Windsor ON Canada
| | - Franziska Broell
- Department of Integrative Biology University of Windsor Windsor ON Canada
| | - Harri Pettitt‐Wade
- Department of Integrative Biology University of Windsor Windsor ON Canada
| | - Yuuki Y. Watanabe
- National Institute of Polar Research Tachikawa Japan
- Department of Polar Science The Graduate University for Advanced Studies, SOKENDAI Tachikawa Japan
| | - Marianne Marcoux
- Fisheries and Oceans Canada Winnipeg MB Canada
- Department of Biological Sciences University of Manitoba Winnipeg MB Canada
| | - Nigel E. Hussey
- Department of Integrative Biology University of Windsor Windsor ON Canada
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63
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Gelardi V, Fagot J, Barrat A, Claidière N. Detecting social (in)stability in primates from their temporal co-presence network. Anim Behav 2019. [DOI: 10.1016/j.anbehav.2019.09.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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64
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Buil JMM, Peckre LR, Dörge M, Fichtel C, Kappeler PM, Scherberger H. Remotely releasable collar mechanism for medium-sized mammals: an affordable technology to avoid multiple captures. WILDLIFE BIOLOGY 2019. [DOI: 10.2981/wlb.00581] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Jeroen M. M. Buil
- J. M. M. Buil, M. Dörge and H. Scherberger (https://orcid.org/0000-0001-6593-2800) ✉ , Neurobiology Laboratory, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany. HS also at: Johann-Friedrich-Bl
| | - Louise R. Peckre
- L. R. Peckre (https://orcid.org/0000-0002-0065-8529), C. Fichtel (https://orcid.org/0000-0002-8346-2168)P. M. Kappeler, Behavioral Ecology and Sociobiology Unit, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany
| | - Matthias Dörge
- J. M. M. Buil, M. Dörge and H. Scherberger (https://orcid.org/0000-0001-6593-2800) ✉ , Neurobiology Laboratory, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany. HS also at: Johann-Friedrich-Bl
| | - Claudia Fichtel
- L. R. Peckre (https://orcid.org/0000-0002-0065-8529), C. Fichtel (https://orcid.org/0000-0002-8346-2168)P. M. Kappeler, Behavioral Ecology and Sociobiology Unit, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany
| | - Peter M. Kappeler
- L. R. Peckre (https://orcid.org/0000-0002-0065-8529), C. Fichtel (https://orcid.org/0000-0002-8346-2168)P. M. Kappeler, Behavioral Ecology and Sociobiology Unit, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany
| | - Hansjörg Scherberger
- J. M. M. Buil, M. Dörge and H. Scherberger (https://orcid.org/0000-0001-6593-2800) ✉ , Neurobiology Laboratory, German Primate Center GmbH – Leibniz Inst. for Primate Research, Goettingen, Germany. HS also at: Johann-Friedrich-Bl
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65
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Bro-Jørgensen J, Franks DW, Meise K. Linking behaviour to dynamics of populations and communities: application of novel approaches in behavioural ecology to conservation. Philos Trans R Soc Lond B Biol Sci 2019; 374:20190008. [PMID: 31352890 PMCID: PMC6710565 DOI: 10.1098/rstb.2019.0008] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/19/2019] [Indexed: 01/03/2023] Open
Abstract
The impact of environmental change on the reproduction and survival of wildlife is often behaviourally mediated, placing behavioural ecology in a central position to quantify population- and community-level consequences of anthropogenic threats to biodiversity. This theme issue demonstrates how recent conceptual and methodological advances in the discipline are applied to inform conservation. The issue highlights how the focus in behavioural ecology on understanding variation in behaviour between individuals, rather than just measuring the population mean, is critical to explaining demographic stochasticity and thereby reducing fuzziness of population models. The contributions also show the importance of knowing the mechanisms by which behaviour is achieved, i.e. the role of learning, reasoning and instincts, in order to understand how behaviours change in human-modified environments, where their function is less likely to be adaptive. More recent work has thus abandoned the 'adaptationist' paradigm of early behavioural ecology and increasingly measures evolutionary processes directly by quantifying selection gradients and phenotypic plasticity. To support quantitative predictions at the population and community levels, a rich arsenal of modelling techniques has developed, and interdisciplinary approaches show promising prospects for predicting the effectiveness of alternative management options, with the social sciences, movement ecology and epidemiology particularly pertinent. The theme issue furthermore explores the relevance of behaviour for global threat assessment, and practical advice is given as to how behavioural ecologists can augment their conservation impact by carefully selecting and promoting their study systems, and increasing their engagement with local communities, natural resource managers and policy-makers. Its aim to uncover the nuts and bolts of how natural systems work positions behavioural ecology squarely in the heart of conservation biology, where its perspective offers an all-important complement to more descriptive 'big-picture' approaches to priority setting. This article is part of the theme issue 'Linking behaviour to dynamics of populations and communities: application of novel approaches in behavioural ecology to conservation'.
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Affiliation(s)
- Jakob Bro-Jørgensen
- Mammalian Behaviour and Evolution Group, Department of Evolution, Ecology and Behaviour, University of Liverpool, Neston CH64 7TE, UK
| | - Daniel W. Franks
- Department of Biology, University of York, York YO10 5DD, UK
- Department of Computer Science, University of York, York YO10 5GH, UK
| | - Kristine Meise
- Mammalian Behaviour and Evolution Group, Department of Evolution, Ecology and Behaviour, University of Liverpool, Neston CH64 7TE, UK
- Department of Biology, University of York, York YO10 5DD, UK
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66
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Abstract
Abstract
The aggregation of courting males is widespread among animal taxa, yet we do not understand why males congregate and therefore intensify local competition for female attention. The most commonly invoked theoretical explanation is that females preferentially approach clustered males due to the many benefits they would gain, and clustered males would therefore have higher mating success. However, although theoretical explanations of aggregation formation are well advanced, empirical studies are scarce, especially in invertebrates. In fact, there is little evidence that females do prefer to approach clustered displayers over spaced displayers. Here we address this question by using robotic crabs to test female preferences in fiddler crabs (a visually displaying species) and show that females do not preferentially approach clustered males. We suggest that if this pattern is more widespread, the most commonly invoked explanation of courting aggregations is of limited use. We offer explanations for the strong clustering behavior we observe in this species and discuss the implications of this finding for the theoretical underpinnings of this research field.
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Affiliation(s)
- Daniela M Perez
- Research School of Biology, The Australian National University, Canberra, Australia
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67
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Ling H, Mclvor GE, van der Vaart K, Vaughan RT, Thornton A, Ouellette NT. Local interactions and their group-level consequences in flocking jackdaws. Proc Biol Sci 2019; 286:20190865. [PMID: 31266425 PMCID: PMC6650722 DOI: 10.1098/rspb.2019.0865] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 06/07/2019] [Indexed: 11/12/2022] Open
Abstract
As one of nature's most striking examples of collective behaviour, bird flocks have attracted extensive research. However, we still lack an understanding of the attractive and repulsive forces that govern interactions between individuals within flocks and how these forces influence neighbours' relative positions and ultimately determine the shape of flocks. We address these issues by analysing the three-dimensional movements of wild jackdaws ( Corvus monedula) in flocks containing 2-338 individuals. We quantify the social interaction forces in large, airborne flocks and find that these forces are highly anisotropic. The long-range attraction in the direction perpendicular to the movement direction is stronger than that along it, and the short-range repulsion is generated mainly by turning rather than changing speed. We explain this phenomenon by considering wingbeat frequency and the change in kinetic and gravitational potential energy during flight, and find that changing the direction of movement is less energetically costly than adjusting speed for birds. Furthermore, our data show that collision avoidance by turning can alter local neighbour distributions and ultimately change the group shape. Our results illustrate the macroscopic consequences of anisotropic interaction forces in bird flocks, and help to draw links between group structure, local interactions and the biophysics of animal locomotion.
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Affiliation(s)
- Hangjian Ling
- Department of Civil and Environmental Engineering, Stanford University, Stanford, CA, USA
| | - Guillam E. Mclvor
- Center for Ecology and Conservation, University of Exeter, Penryn, UK
| | - Kasper van der Vaart
- Department of Civil and Environmental Engineering, Stanford University, Stanford, CA, USA
| | | | - Alex Thornton
- Center for Ecology and Conservation, University of Exeter, Penryn, UK
| | - Nicholas T. Ouellette
- Department of Civil and Environmental Engineering, Stanford University, Stanford, CA, USA
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68
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Kaczensky P, Khaliun S, Payne J, Boldgiv B, Buuveibaatar B, Walzer C. Through the eye of a Gobi khulan - Application of camera collars for ecological research of far-ranging species in remote and highly variable ecosystems. PLoS One 2019; 14:e0217772. [PMID: 31163047 PMCID: PMC6548383 DOI: 10.1371/journal.pone.0217772] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Accepted: 05/17/2019] [Indexed: 11/18/2022] Open
Abstract
The Mongolian Gobi-Eastern Steppe Ecosystem is one of the largest remaining natural drylands and home to a unique assemblage of migratory ungulates. Connectivity and integrity of this ecosystem are at risk if increasing human activities are not carefully planned and regulated. The Gobi part supports the largest remaining population of the Asiatic wild ass (Equus hemionus; locally called "khulan"). Individual khulan roam over areas of thousands of square kilometers and the scale of their movements is among the largest described for terrestrial mammals, making them particularly difficult to monitor. Although GPS satellite telemetry makes it possible to track animals in near-real time and remote sensing provides environmental data at the landscape scale, remotely collected data also harbors the risk of missing important abiotic or biotic environmental variables or life history events. We tested the potential of animal born camera systems ("camera collars") to improve our understanding of the drivers and limitations of khulan movements. Deployment of a camera collar on an adult khulan mare resulted in 7,881 images over a one-year period. Over half of the images showed other khulan and 1,630 images showed enough of the collared khulan to classify the behaviour of the animals seen into several main categories. These khulan images provided us with: i) new insights into important life history events and grouping dynamics, ii) allowed us to calculate time budgets for many more animals than the collared khulan alone, and iii) provided us with a training dataset for calibrating data from accelerometer and tilt sensors in the collar. The images also allowed to document khulan behaviour near infrastructure and to obtain a day-time encounter rate between a specific khulan with semi-nomadic herders and their livestock. Lastly, the images allowed us to ground truth the availability of water by: i) confirming waterpoints predicted from other analyses, ii) detecting new waterpoints, and iii) compare precipitation records for rain and snow from landscape scale climate products with those documented by the camera collar. We discuss the added value of deploying camera collars on a subset of animals in remote, highly variable ecosystems for research and conservation.
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Affiliation(s)
- Petra Kaczensky
- Norwegian Institute of Nature Research, Trondheim, Norway
- Research Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Vienna, Austria
| | - Sanchir Khaliun
- Ecology Group, Department of Biology, National University of Mongolia, Ulaanbaatar, Mongolia
| | - John Payne
- Research Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Vienna, Austria
- Wildlife Conservation Society, Mongolia Program, Ulaanbaatar, Mongolia
| | - Bazartseren Boldgiv
- Ecology Group, Department of Biology, National University of Mongolia, Ulaanbaatar, Mongolia
| | | | - Chris Walzer
- Research Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Vienna, Austria
- Wildlife Conservation Society, Mongolia Program, Ulaanbaatar, Mongolia
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69
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O'Bryan LR, Abaid N, Nakayama S, Dey T, King AJ, Cowlishaw G, Rubenstein DI, Garnier S. Contact Calls Facilitate Group Contraction in Free-Ranging Goats (Capra aegagrus hircus). Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00073] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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70
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Torney CJ, Lamont M, Debell L, Angohiatok RJ, Leclerc LM, Berdahl AM. Inferring the rules of social interaction in migrating caribou. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0385. [PMID: 29581404 PMCID: PMC5882989 DOI: 10.1098/rstb.2017.0385] [Citation(s) in RCA: 61] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/10/2018] [Indexed: 11/12/2022] Open
Abstract
Social interactions are a significant factor that influence the decision-making of species ranging from humans to bacteria. In the context of animal migration, social interactions may lead to improved decision-making, greater ability to respond to environmental cues, and the cultural transmission of optimal routes. Despite their significance, the precise nature of social interactions in migrating species remains largely unknown. Here we deploy unmanned aerial systems to collect aerial footage of caribou as they undertake their migration from Victoria Island to mainland Canada. Through a Bayesian analysis of trajectories we reveal the fine-scale interaction rules of migrating caribou and show they are attracted to one another and copy directional choices of neighbours, but do not interact through clearly defined metric or topological interaction ranges. By explicitly considering the role of social information on movement decisions we construct a map of near neighbour influence that quantifies the nature of information flow in these herds. These results will inform more realistic, mechanism-based models of migration in caribou and other social ungulates, leading to better predictions of spatial use patterns and responses to changing environmental conditions. Moreover, we anticipate that the protocol we developed here will be broadly applicable to study social behaviour in a wide range of migratory and non-migratory taxa. This article is part of the theme issue ‘Collective movement ecology’.
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Affiliation(s)
- Colin J Torney
- School of Mathematics and Statistics, University of Glasgow, Glasgow G12 8QW, UK .,Centre for Mathematics & the Environment, University of Exeter, Penryn TR10 9EZ, UK
| | - Myles Lamont
- TerraFauna Wildlife Consulting, 19313 Zero Avenue, Surrey, BC, Canada, V3Z 9R9.,Government of Nunavut, Department of Environment, Kugluktuk, NU, Canada, X0B 0E0
| | - Leon Debell
- Centre for Mathematics & the Environment, University of Exeter, Penryn TR10 9EZ, UK
| | | | - Lisa-Marie Leclerc
- Government of Nunavut, Department of Environment, Kugluktuk, NU, Canada, X0B 0E0
| | - Andrew M Berdahl
- Santa Fe Institute, Santa Fe, NM 87501, USA .,School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA 98195, USA
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71
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Hardesty-Moore M, Deinet S, Freeman R, Titcomb GC, Dillon EM, Stears K, Klope M, Bui A, Orr D, Young HS, Miller-Ter Kuile A, Hughey LF, McCauley DJ. Migration in the Anthropocene: how collective navigation, environmental system and taxonomy shape the vulnerability of migratory species. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0017. [PMID: 29581401 DOI: 10.1098/rstb.2017.0017] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/27/2017] [Indexed: 11/12/2022] Open
Abstract
Recent increases in human disturbance pose significant threats to migratory species using collective movement strategies. Key threats to migrants may differ depending on behavioural traits (e.g. collective navigation), taxonomy and the environmental system (i.e. freshwater, marine or terrestrial) associated with migration. We quantitatively assess how collective navigation, taxonomic membership and environmental system impact species' vulnerability by (i) evaluating population change in migratory and non-migratory bird, mammal and fish species using the Living Planet Database (LPD), (ii) analysing the role of collective navigation and environmental system on migrant extinction risk using International Union for Conservation of Nature (IUCN) classifications and (iii) compiling literature on geographical range change of migratory species. Likelihood of population decrease differed by taxonomic group: migratory birds were more likely to experience annual declines than non-migrants, while mammals displayed the opposite pattern. Within migratory species in IUCN, we observed that collective navigation and environmental system were important predictors of extinction risk for fishes and birds, but not for mammals, which had overall higher extinction risk than other taxa. We found high phylogenetic relatedness among collectively navigating species, which could have obscured its importance in determining extinction risk. Overall, outputs from these analyses can help guide strategic interventions to conserve the most vulnerable migrations.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Molly Hardesty-Moore
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Stefanie Deinet
- Marine Science Institute, University of California, Santa Barbara, CA 93106, USA
| | - Robin Freeman
- Marine Science Institute, University of California, Santa Barbara, CA 93106, USA
| | - Georgia C Titcomb
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Erin M Dillon
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Keenan Stears
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Maggie Klope
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - An Bui
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Devyn Orr
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Hillary S Young
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Ana Miller-Ter Kuile
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Lacey F Hughey
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA
| | - Douglas J McCauley
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA.,Indicators and Assessments Research Unit, Institute of Zoology, Zoological Society of London, London NW1 4RY, UK
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72
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Berdahl AM, Kao AB, Flack A, Westley PAH, Codling EA, Couzin ID, Dell AI, Biro D. Collective animal navigation and migratory culture: from theoretical models to empirical evidence. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0009. [PMID: 29581394 PMCID: PMC5882979 DOI: 10.1098/rstb.2017.0009] [Citation(s) in RCA: 94] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/01/2017] [Indexed: 12/31/2022] Open
Abstract
Animals often travel in groups, and their navigational decisions can be influenced by social interactions. Both theory and empirical observations suggest that such collective navigation can result in individuals improving their ability to find their way and could be one of the key benefits of sociality for these species. Here, we provide an overview of the potential mechanisms underlying collective navigation, review the known, and supposed, empirical evidence for such behaviour and highlight interesting directions for future research. We further explore how both social and collective learning during group navigation could lead to the accumulation of knowledge at the population level, resulting in the emergence of migratory culture. This article is part of the theme issue ‘Collective movement ecology’.
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Affiliation(s)
- Andrew M Berdahl
- Santa Fe Institute, Santa Fe, NM 87501, USA .,School of Aquatic and Fishery Sciences, University of Washington, Seattle, WA 98195, USA
| | - Albert B Kao
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Andrea Flack
- Department of Migration and Immuno-Ecology, Max Planck Institute for Ornithology, 78315 Radolfzell, Germany.,Department of Biology, University of Konstanz, 78457 Konstanz, Germany
| | - Peter A H Westley
- Department of Fisheries, University of Alaska Fairbanks, Fairbanks, AK 99775, USA
| | - Edward A Codling
- Department of Mathematical Sciences, University of Essex, Colchester, CO4 3SQ, UK
| | - Iain D Couzin
- Department of Biology, University of Konstanz, 78457 Konstanz, Germany.,Department of Collective Behaviour, Max Planck Institute for Ornithology, Konstanz, Germany.,Chair of Biodiversity and Collective Behaviour, University of Konstanz, 78457 Konstanz, Germany
| | - Anthony I Dell
- National Great Rivers Research and Education Center, Alton, IL 62024, USA.,Department of Biology, Washington University in St Louis, St Louis, MO 63130, USA
| | - Dora Biro
- Department of Zoology, University of Oxford, Oxford OX1 3PS, UK
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73
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Calabrese JM, Fleming CH, Fagan WF, Rimmler M, Kaczensky P, Bewick S, Leimgruber P, Mueller T. Disentangling social interactions and environmental drivers in multi-individual wildlife tracking data. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0007. [PMID: 29581392 DOI: 10.1098/rstb.2017.0007] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Accepted: 10/31/2017] [Indexed: 11/12/2022] Open
Abstract
While many animal species exhibit strong conspecific interactions, movement analyses of wildlife tracking datasets still largely focus on single individuals. Multi-individual wildlife tracking studies provide new opportunities to explore how individuals move relative to one another, but such datasets are frequently too sparse for the detailed, acceleration-based analytical methods typically employed in collective motion studies. Here, we address the methodological gap between wildlife tracking data and collective motion by developing a general method for quantifying movement correlation from sparsely sampled data. Unlike most existing techniques for studying the non-independence of individual movements with wildlife tracking data, our approach is derived from an analytically tractable stochastic model of correlated movement. Our approach partitions correlation into a deterministic tendency to move in the same direction termed 'drift correlation' and a stochastic component called 'diffusive correlation'. These components suggest the mechanisms that coordinate movements, with drift correlation indicating external influences, and diffusive correlation pointing to social interactions. We use two case studies to highlight the ability of our approach both to quantify correlated movements in tracking data and to suggest the mechanisms that generate the correlation. First, we use an abrupt change in movement correlation to pinpoint the onset of spring migration in barren-ground caribou. Second, we show how spatial proximity mediates intermittently correlated movements among khulans in the Gobi desert. We conclude by discussing the linkages of our approach to the theory of collective motion.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Justin M Calabrese
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA
| | - Christen H Fleming
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA.,Department of Biology, University of Maryland, College Park, MD, USA
| | - William F Fagan
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Martin Rimmler
- Department of Biology, University of Stuttgart, Stuttgart, Germany
| | | | - Sharon Bewick
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Peter Leimgruber
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, Front Royal, VA, USA
| | - Thomas Mueller
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany.,Department of Biological Sciences, University Frankfurt, Frankfurt, Germany
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74
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Torney CJ, Hopcraft JGC, Morrison TA, Couzin ID, Levin SA. From single steps to mass migration: the problem of scale in the movement ecology of the Serengeti wildebeest. Philos Trans R Soc Lond B Biol Sci 2019; 373:rstb.2017.0012. [PMID: 29581397 DOI: 10.1098/rstb.2017.0012] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/24/2017] [Indexed: 11/12/2022] Open
Abstract
A central question in ecology is how to link processes that occur over different scales. The daily interactions of individual organisms ultimately determine community dynamics, population fluctuations and the functioning of entire ecosystems. Observations of these multiscale ecological processes are constrained by various technological, biological or logistical issues, and there are often vast discrepancies between the scale at which observation is possible and the scale of the question of interest. Animal movement is characterized by processes that act over multiple spatial and temporal scales. Second-by-second decisions accumulate to produce annual movement patterns. Individuals influence, and are influenced by, collective movement decisions, which then govern the spatial distribution of populations and the connectivity of meta-populations. While the field of movement ecology is experiencing unprecedented growth in the availability of movement data, there remain challenges in integrating observations with questions of ecological interest. In this article, we present the major challenges of addressing these issues within the context of the Serengeti wildebeest migration, a keystone ecological phenomena that crosses multiple scales of space, time and biological complexity.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Colin J Torney
- School of Mathematics and Statistics, University of Glasgow, Glasgow G12 8SQ, UK
| | - J Grant C Hopcraft
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow G12 8QQ, UK
| | - Thomas A Morrison
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow G12 8QQ, UK
| | - Iain D Couzin
- Department of Collective Behaviour, Max Planck Institute for Ornithology, 78464 Konstanz, Germany.,Chair of Biodiversity and Collective Behaviour, Department of Biology, University of Konstanz, 78464 Konstanz, Germany
| | - Simon A Levin
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
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75
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Greif S, Yovel Y. Using on-board sound recordings to infer behaviour of free-moving wild animals. ACTA ACUST UNITED AC 2019; 222:222/Suppl_1/jeb184689. [PMID: 30728226 DOI: 10.1242/jeb.184689] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Technological advances in the last 20 years have enabled researchers to develop increasingly sophisticated miniature devices (tags) that record an animal's behaviour not from an observational, external viewpoint, but directly on the animals themselves. So far, behavioural research with these tags has mostly been conducted using movement or acceleration data. But on-board audio recordings have become more and more common following pioneering work in marine mammal research. The first questions that come to mind when recording sound on-board animals concern their vocal behaviour. When are they calling? How do they adjust their behaviour? What acoustic parameters do they change and how? However, other topics like foraging behaviour, social interactions or environmental acoustics can now be addressed as well and offer detailed insight into the animals' daily life. In this Review, we discuss the possibilities, advantages and limitations of on-board acoustic recordings. We focus primarily on bats as their active-sensing, echolocating lifestyle allows many approaches to a multi-faceted acoustic assessment of their behaviour. The general ideas and concepts, however, are applicable to many animals and hopefully will demonstrate the versatility of on-board acoustic recordings and stimulate new research.
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Affiliation(s)
- Stefan Greif
- Department of Zoology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel.,Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel
| | - Yossi Yovel
- Department of Zoology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv 69978, Israel .,Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel
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76
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Abstract
The patterns and mechanisms of collective decision making in humans and animals have attracted both empirical and theoretical attention. Of particular interest has been the variety of social feedback rules and the extent to which these behavioral rules can be explained and predicted from theories of rational estimation and decision making. However, models that aim to model the full range of social information use have incorporated ad hoc departures from rational decision-making theory to explain the apparent stochasticity and variability of behavior. In this paper I develop a model of social information use and collective decision making by fully rational agents that reveals how a wide range of apparently stochastic social decision rules emerge from fundamental information asymmetries both between individuals and between the decision makers and the observer of those decisions. As well as showing that rational decision making is consistent with empirical observations of collective behavior, this model makes several testable predictions about how individuals make decisions in groups and offers a valuable perspective on how we view sources of variability in animal, and human, behavior.
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77
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Garland J, Berdahl AM, Sun J, Bollt EM. Anatomy of leadership in collective behaviour. CHAOS (WOODBURY, N.Y.) 2018; 28:075308. [PMID: 30070518 DOI: 10.1063/1.5024395] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2018] [Accepted: 05/30/2018] [Indexed: 06/08/2023]
Abstract
Understanding the mechanics behind the coordinated movement of mobile animal groups (collective motion) provides key insights into their biology and ecology, while also yielding algorithms for bio-inspired technologies and autonomous systems. It is becoming increasingly clear that many mobile animal groups are composed of heterogeneous individuals with differential levels and types of influence over group behaviors. The ability to infer this differential influence, or leadership, is critical to understanding group functioning in these collective animal systems. Due to the broad interpretation of leadership, many different measures and mathematical tools are used to describe and infer "leadership," e.g., position, causality, influence, and information flow. But a key question remains: which, if any, of these concepts actually describes leadership? We argue that instead of asserting a single definition or notion of leadership, the complex interaction rules and dynamics typical of a group imply that leadership itself is not merely a binary classification (leader or follower), but rather, a complex combination of many different components. In this paper, we develop an anatomy of leadership, identify several principal components, and provide a general mathematical framework for discussing leadership. With the intricacies of this taxonomy in mind, we present a set of leadership-oriented toy models that should be used as a proving ground for leadership inference methods going forward. We believe this multifaceted approach to leadership will enable a broader understanding of leadership and its inference from data in mobile animal groups and beyond.
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Affiliation(s)
| | | | - Jie Sun
- Department of Mathematics, Clarkson University, Potsdam, New York 13699, USA
| | - Erik M Bollt
- Department of Mathematics, Clarkson University, Potsdam, New York 13699, USA
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Strandburg-Peshkin A, Papageorgiou D, Crofoot MC, Farine DR. Inferring influence and leadership in moving animal groups. Philos Trans R Soc Lond B Biol Sci 2018; 373:20170006. [PMID: 29581391 PMCID: PMC5882976 DOI: 10.1098/rstb.2017.0006] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/19/2017] [Indexed: 11/12/2022] Open
Abstract
Collective decision-making is a daily occurrence in the lives of many group-living animals, and can have critical consequences for the fitness of individuals. Understanding how decisions are reached, including who has influence and the mechanisms by which information and preferences are integrated, has posed a fundamental challenge. Here, we provide a methodological framework for studying influence and leadership in groups. We propose that individuals have influence if their actions result in some behavioural change among their group-mates, and are leaders if they consistently influence others. We highlight three components of influence (influence instances, total influence and consistency of influence), which can be assessed at two levels (individual-to-individual and individual-to-group). We then review different methods, ranging from individual positioning within groups to information-theoretic approaches, by which influence has been operationally defined in empirical studies, as well as how such observations can be aggregated to give insight into the underlying decision-making process. We focus on the domain of collective movement, with a particular emphasis on methods that have recently been, or are being, developed to take advantage of simultaneous tracking data. We aim to provide a resource bringing together methodological tools currently available for studying leadership in moving animal groups, as well as to discuss the limitations of current methodologies and suggest productive avenues for future research.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Ariana Strandburg-Peshkin
- Department of Migration and Immuno-ecology, Max Planck Institute for Ornithology, Am Obstberg 1, 78315 Radolfzell, Germany
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurstrasse 190, 8057 Zurich, Switzerland
| | - Danai Papageorgiou
- Department of Collective Behaviour, Max Planck Institute for Ornithology, Universitätsstrasse 10, 78464 Konstanz, Germany
- Chair of Biodiversity and Collective Behaviour, Department of Biology, University of Konstanz, Universitätsstrasse 10, 78464 Konstanz, Germany
| | - Margaret C Crofoot
- Department of Anthropology, University of California Davis, 1 Shields Ave, Davis, CA 95616, USA
- Smithsonian Tropical Research Institute, Luis Clement Avenue, Building 401 Tupper, Balboa Ancon, Panama
| | - Damien R Farine
- Department of Collective Behaviour, Max Planck Institute for Ornithology, Universitätsstrasse 10, 78464 Konstanz, Germany
- Chair of Biodiversity and Collective Behaviour, Department of Biology, University of Konstanz, Universitätsstrasse 10, 78464 Konstanz, Germany
- Edward Grey Institute of Field Ornithology, Department of Zoology, University of Oxford, Oxford OX1 3PS, UK
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Westley PAH, Berdahl AM, Torney CJ, Biro D. Collective movement in ecology: from emerging technologies to conservation and management. Philos Trans R Soc Lond B Biol Sci 2018; 373:20170004. [PMID: 29581389 PMCID: PMC5882974 DOI: 10.1098/rstb.2017.0004] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/09/2018] [Indexed: 01/19/2023] Open
Abstract
Recent advances in technology and quantitative methods have led to the emergence of a new field of study that stands to link insights of researchers from two closely related, but often disconnected disciplines: movement ecology and collective animal behaviour. To date, the field of movement ecology has focused on elucidating the internal and external drivers of animal movement and the influence of movement on broader ecological processes. Typically, tracking and/or remote sensing technology is employed to study individual animals in natural conditions. By contrast, the field of collective behaviour has quantified the significant role social interactions play in the decision-making of animals within groups and, to date, has predominantly relied on controlled laboratory-based studies and theoretical models owing to the constraints of studying interacting animals in the field. This themed issue is intended to formalize the burgeoning field of collective movement ecology which integrates research from both movement ecology and collective behaviour. In this introductory paper, we set the stage for the issue by briefly examining the approaches and current status of research in these areas. Next, we outline the structure of the theme issue and describe the obstacles collective movement researchers face, from data acquisition in the field to analysis and problems of scale, and highlight the key contributions of the assembled papers. We finish by presenting research that links individual and broad-scale ecological and evolutionary processes to collective movement, and finally relate these concepts to emerging challenges for the management and conservation of animals on the move in a world that is increasingly impacted by human activity.This article is part of the theme issue 'Collective movement ecology'.
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Affiliation(s)
- Peter A H Westley
- Department of Fisheries, University of Alaska Fairbanks, Fairbanks, AK 99775, USA
| | - Andrew M Berdahl
- Santa Fe Institute, Santa Fe, NM 87501, USA
- School of Aquatic & Fishery Sciences, University of Washington, Seattle, WA 98195, USA
| | - Colin J Torney
- School of Mathematics and Statistics, University of Glasgow, Glasgow G12 8SQ, UK
| | - Dora Biro
- Department of Zoology, University of Oxford, Oxford OX1 3PS, UK
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