Influence of pH on Ammonia Accumulation and Toxicity in Halophilic, Methylotrophic Methanogens

Polyphasic analyses of methanogenic archaeal communities in agricultural biogas plants

Knowledge of the microbial consortia participating in the generation of biogas, especially in methane formation, is still limited. To overcome this limitation, the methanogenic archaeal communities in six full-scale biogas plants supplied with different liquid manures and renewable raw materials as substrates were analyzed by a polyphasic approach. Fluorescence in situ hybridization (FISH) was carried out to quantify the methanogenic Archaea in the reactor samples. In addition, quantitative real-time PCR (Q-PCR) was used to support and complete the FISH analysis. Five of the six biogas reactors were dominated by hydrogenotrophic Methanomicrobiales. The average values were between 60 to 63% of archaeal cell counts (FISH) and 61 to 99% of archaeal 16S rRNA gene copies (Q-PCR). Within this order, Methanoculleus was found to be the predominant genus as determined by amplified rRNA gene restriction analysis. The aceticlastic family Methanosaetaceae was determined to be the dominant methanogenic group in only one biogas reactor, with average values for Q-PCR and FISH between 64% and 72%. Additionally, in three biogas reactors hitherto uncharacterized but potentially methanogenic species were detected. They showed closest accordance with nucleotide sequences of the hitherto unclassified CA-11 (85%) and ARC-I (98%) clusters. These results point to hydrogenotrophic methanogenesis as a predominant pathway for methane synthesis in five of the six analyzed biogas plants. In addition, a correlation between the absence of Methanosaetaceae in the biogas reactors and high concentrations of total ammonia (sum of NH(3) and NH(4)(+)) was observed.

Reduction of accumulated volatile fatty acids by an acetate-degrading enrichment culture

The effects of the addition of an acetate-degrading enrichment culture to an anaerobic digester with a stagnating biogas production were investigated. Initially, a thermophilic batch-operated lab-scale digester was inoculated with the diluted fermenter sludge of a biogas plant, and process parameters including the concentration of volatile fatty acids (VFAs) and gases in the headspace were measured. After a phase of high gas production, a stagnation of biogas production followed for a further 30 days. An acetate enrichment culture was added 34 days after the commencement of the experiment and this resulted in a sharp decrease in the concentrations of accumulated VFAs and an increase in total biogas and CH(4) production. An archaeon with a sequence similarity of 98% to Methanosarcina sp. and the ability to degrade acetic acid was introduced with the enrichment culture and is proposed to have been the driving factor for the changes that occurred within a few days to the process.

Interaction between temperature and ammonia in mesophilic digesters for animal waste treatment

Four anaerobic sequencing batch reactors (ASBRs) were operated during a period of 988 days to evaluate the effect of temperature, ammonia, and their interconnectivity on the methane yield of anaerobic processes for animal waste treatment. During period 1 (day 0-378), the methane yield was 0.31 L CH(4)/g volatile solids (VS) for all digesters (with no statistical differences among them) at a temperature and total ammonium-N levels of 25 degrees C and approximately 1200 mg NH(4)(+)-N/L, respectively. During period 2 (day 379-745), the methane yield at 25 degrees C decreased by 45% when total ammonium-N and ammonia-N were increased in two of the four ASBRs to levels >4000 mg NH(4)(+)-N/L and >80 mg NH(3)-N/L, respectively. During period 3 (day 746-988), this relative inhibition was reduced from 45% to 13% compared to the low-ammonia control reactors when the operating temperature was increased from 25 degrees C to 35 degrees C (while the free ammonia levels increased from approximately 100 to approximately 250 mg NH(3)-N/L). The 10 degrees C increase in temperature doubled the rate constant for methanogenesis, which overwhelmed the elevated toxicity effects caused by the increasing concentration of free ammonia. Thus, the farmer/operator may alleviate ammonia toxicity by increasing the operating temperature within the mesophilic range. We extrapolated our data to correlate temperature, ammonia, and methane yield and to hypothesize that the difference between high- and low-ammonia reactors is negligible at the optimum mesophilic temperature of 38 degrees C.

Effects of long-term pH elevation on the sulfate-reducing and methanogenic activities of anaerobic sewer biofilms

The dosage of alkali is often applied by the wastewater industry to reduce the transfer of hydrogen sulfide from wastewater to the sewer atmosphere. In this paper the activities of Sulfate Reducing Bacteria (SRB) and Methanogenic Archaea (MA) under elevated pH conditions (8.6 and 9.0) were evaluated in a laboratory scale anaerobic sewer reactor. Compared to those in a control reactor without pH control (pH 7.6+/-0.1), the SRB activity was reduced by 30% and 50%, respectively, at pH 8.6 and pH 9.0. When normal pH was resumed, it took approximately 1 month for the SRB activity to fully recover. Methanogenic activities developed in the control reactor in 3 months after the reactor start-up, while no significant methanogenic activities were detected in the experimental reactor until normal pH was resumed. The results suggest that elevated pH at 8.6-9.0 suppressed the growth of methanogens. These experimental results clearly showed that, in addition to its well-known effect of reducing H(2)S transfer from the liquid to the gas phase, pH elevation considerably reduces sulfide and methane production by anaerobic sewer biofilms. These findings are significant for the optimal use of alkali addition to sewers for the control of H(2)S and CH(4) emissions. A model-based study showed that, by adding the alkali at the beginning rather than towards the end of a rising main, substantial savings in chemicals can be achieved while achieving the same level of sulfide emission control, and complete methane emission control.

Alternative treatment for septic tank sludge: co-digestion with municipal solid waste in bioreactor landfill simulators

Co-disposal of septic tank sludge had a positive effect on the municipal solid waste (MSW) stabilisation process in Bioreactor Landfill simulators. Co-disposal experiments were carried out using the Bioreactor Landfill approach aiming to solve the environmental problems caused by indiscriminate and inadequate disposal of MSW and especially of septic tank sludge. The simulator receiving septic tank sludge exhibited a 200 days shorter lag-phase as compared to the 350 days required by the control simulator to start the exponential biogas production. Additionally, the simulator with septic sludge apparently retained more moisture (>60% w/w), which enhanced the overall conversion of organic matter hence increasing the biogas production (0.60 m3 biogas kg(-1)VS(converted)) and removal efficiency of 60% for VS from the simulator. Alkaline pH values (pH>8.5) did not inhibit the biogas production; moreover it contributed to reduce partially the negative effects of NH(4)(+) (>2 g L(-1)) due to NH(3) volatilisation thus reducing the nitrogen content of the residues. Associated risks and hazards with septage disposal were practically eliminated as total coliform and faecal coliform contents were reduced by 99% and 100%, respectively at the end of the experiment. These results indicate that co-disposal has two direct benefits, including the safe and environmentally sound disposal of septic tank sludge and an improvement of the overall performance of the Bioreactor Landfill by increasing moisture retention and supplying a more acclimatised bacterial population.

The possible origin and persistence of life on Enceladus and detection of biomarkers in the plume

The jets of icy particles and water vapor issuing from the south pole of Enceladus are evidence for activity driven by some geophysical energy source. The vapor has also been shown to contain simple organic compounds, and the south polar terrain is bathed in excess heat coming from below. The source of the ice and vapor, and the mechanisms that accelerate the material into space, remain obscure. However, it is possible that a liquid water environment exists beneath the south polar cap, which may be conducive to life. Several theories for the origin of life on Earth would apply to Enceladus. These are (1) origin in an organic-rich mixture, (2) origin in the redox gradient of a submarine vent, and (3) panspermia. There are three microbial ecosystems on Earth that do not rely on sunlight, oxygen, or organics produced at the surface and, thus, provide analogues for possible ecologies on Enceladus. Two of these ecosystems are found deep in volcanic rock, and the primary productivity is based on the consumption by methanogens of hydrogen produced by rock reactions with water. The third ecosystem is found deep below the surface in South Africa and is based on sulfur-reducing bacteria consuming hydrogen and sulfate, both of which are ultimately produced by radioactive decay. Methane has been detected in the plume of Enceladus and may be biological in origin. An indicator of biological origin may be the ratio of non-methane hydrocarbons to methane, which is very low (0.001) for biological sources but is higher (0.1-0.01) for nonbiological sources. Thus, Cassini's instruments may detect plausible evidence for life by analysis of hydrocarbons in the plume during close encounters.

Salmonella reduction in manure by the addition of urea and ammonia

Animal manure may contain pathogenic microorganisms and disinfection is suggested to avoid reinfection of animal herds and introduction of zoonotic disease into the food chain. Ammonia and urea were tested for disinfection of bovine manure and Salmonella was found to be rapidly eliminated by the addition of 0.5% aqueous ammonia or 2% w/w urea (s). Treatments (2% urea and 0.5% ammonia), temperature (4 degrees C or 14 degrees C) and combinations of these factors significantly affected the inactivation rate. Decimal values (T(90)) were reduced from 8.3 days in the control to 2.0 days and 0.4 days at 14 degrees C after the addition of urea and ammonia, respectively. At 4 degrees C, the decimal values were reduced from 34 to 4.8 and 1.1 days, respectively. Recommended treatments of bovine manure based on Monte Carlo simulations are 0.5% ammonia followed by storage for one week or 2% urea followed by storage for two weeks at 14 degrees C, one month at 4 degrees C. Storage without additives should include at least one summer in temperate regions. Enterococci were evaluated as indicators for Salmonella but significantly slower decay rate and different behaviour in the material made them unsuitable as indicators for Salmonella in manure disinfected by ammonia or urea. Free ammonia treatment of Salmonella-contaminated manure disinfects the material and raises its fertilizer value.

Comparative transcriptome analysis of responses of Methanothermobacter thermautotrophicus to different environmental stimuli

Methanothermobacter thermautotrophicus strain DeltaH is a model hydrogenotrophic methanogen, for which the complete genome sequence and extensive biochemical information are available. Little is known, however, about how this organism regulates its cellular functions in response to environmental stimuli. In this study, whole-genome oligonucleotide microarrays were constructed for M. thermautotrophicus and used to gain insights into how this organism responds to different environmental stimuli, including hydrogen depletion, shifts in pH and temperature and the occurrence of toxics (hydrogen peroxide and ammonia). Our analysis confirmed that methanogenesis genes (including mtd, mer, frh and mcr) were upregulated under hydrogen-limited conditions, while some of them were affected by other environmental stimuli. Concerning stress responses of this organism, several unique features were revealed. First, there was no universal stress response in this organism. Second, genes for alternative redox enzymes, such as rubrerythrin, were upregulated under the oxidative stress, but those for typical antioxidant enzymes were not. Third, genes relevant to the modification of cell surface structures were differentially expressed under stress conditions. Finally, energy-requiring CO(2) assimilation systems were downregulated under stress conditions. These findings suggest that M. thermautotrophicus has complex transcriptional regulation mechanisms that facilitate it to survive in unstable ecosystems such as an anaerobic digester.

Influence of extrinsic factors on granulation in UASB reactor

The aim of this mini-review is to synthesize and analyze information on how the process of granulation is affected by environmental and operational conditions in the reactor. The factors reviewed are temperature, pH, alkalinity, organic loading rate, upflow velocity, nature and strength of substrate, nutrients, multivalent cations and heavy metals, microbial ecology of seed sludge, exo-cellular polymer, and addition of natural and synthetic polymers. Careful temperature control and adequate alkalinity is required for generation and maintenance of granules. Nature and strength of substrate in conjunction with intra-granular diffusion to a large extent determines the microstructure of the granules. The divalent cations such as calcium and iron may enhance granulation by ionic bridging and linking exo-cellular polymers. However, their presence in excess may lead to cementation due to precipitation leading to increased ash content and mass transfer limitation. The addition of external additives such as ionic polymers may enhance granulation in the upflow anaerobic sludge blanket reactors.

Anaerobic digestion of organic solid poultry slaughterhouse waste--a review

This work reviews the potential of anaerobic digestion for material recovery and energy production from poultry slaughtering by-products and wastes. First, we describe and quantify organic solid by-products and wastes produced in poultry farming and poultry slaughterhouses and discuss their recovery and disposal options. Then we review certain fundamental aspects of anaerobic digestion considered important for the digestion of solid slaughterhouse wastes. Finally, we present an overview of the future potential and current experience of the anaerobic digestion treatment of these materials.