DNA barcoding the Lepidoptera inventory of a large complex tropical conserved wildland, Area de Conservacion Guanacaste, northwestern Costa Rica

A new species of Voria Robineau-Desvoidy (Diptera: Tachinidae) from Area de Conservación Guanacaste in northwestern Costa Rica

Background

We describe a new species in the genus Voria Robineau-Desvoidy, 1830 (Diptera: Tachinidae: Voriini) from Area de Conservación Guanacaste (ACG) in northwestern Costa Rica. It was reared as part of an ongoing inventory of wild-caught caterpillars spanning a variety of moth and butterfly families (Lepidoptera). Our study provides a concise description of the new species using morphology, life history, molecular data, and photographic documentation. In addition to the new species, we provide a diagnosis of the genus as well as new data relating to host use.

New information

The following new species of Voria is described: Voriaerasmocoronadoi Fleming & Wood sp. n.

The following are proposed by Fleming & Wood as new synonyms of Voria: Xenoplagia Townsend, 1914 syn. n., Hystricovoria Townsend, 1928 syn. n., Afrovoria Curran, 1938 syn. n., and Anavoria Mesnil, 1953 syn. n., and Itavoria Townsend, 1931 syn. n.

The following new combinations are proposed as a result of the new synonymies: Voriabakeri (Townsend, 1928), comb. n. and Voriasetosa (Townsend, 1914), comb. n.The authors also propose Voriapollyclari (Rocha-e-Silva, Lopes & Della Lucia, 1999), comb. n. based on the morphology of the holotype.

Nuclear genomes distinguish cryptic species suggested by their DNA barcodes and ecology

DNA sequencing brings another dimension to exploration of biodiversity, and large-scale mitochondrial DNA cytochrome oxidase I barcoding has exposed many potential new cryptic species. Here, we add complete nuclear genome sequencing to DNA barcoding, ecological distribution, natural history, and subtleties of adult color pattern and size to show that a widespread neotropical skipper butterfly known as Udranomia kikkawai (Weeks) comprises three different species in Costa Rica. Full-length barcodes obtained from all three century-old Venezuelan syntypes of U. kikkawai show that it is a rainforest species occurring from Costa Rica to Brazil. The two new species are Udranomia sallydaleyae Burns, a dry forest denizen occurring from Costa Rica to Mexico, and Udranomia tomdaleyi Burns, which occupies the junction between the rainforest and dry forest and currently is known only from Costa Rica. Whereas the three species are cryptic, differing but slightly in appearance, their complete nuclear genomes totaling 15 million aligned positions reveal significant differences consistent with their 0.00065-Mbp (million base pair) mitochondrial barcodes and their ecological diversification. DNA barcoding of tropical insects reared by a massive inventory suggests that the presence of cryptic species is a widespread phenomenon and that further studies will substantially increase current estimates of insect species richness.

Molecular methods to detect Spodoptera frugiperda in Ghana, and implications for monitoring the spread of invasive species in developing countries

Spodoptera frugiperda (J. E. Smith) (Lepidoptera: Noctuidae) is a polyphagous pest indigenous throughout the Americas, which recently appeared in Africa, first reported from São Tomé, Nigeria, Bénin and Togo in 2016, and which we now report from Ghana. This species is recognised to comprise two morphologically identical but genetically distinct strains or species in the Americas, and we found both to be present in Ghana. We discuss possible routes of entry to Africa, of which the likeliest is adults and/or egg masses transported on direct commercial flights between the Americas and West Africa, followed by dispersal by adult flight within Africa. Identification of Lepidoptera is normally based on the markings and morphology of adults, and not on the larvae which actually cause the damage, and therefore larvae have to be reared through to adult for authoritative identification. We confirmed that the use of DNA barcoding allowed unequivocal identification of this new pest from Ghana based on the larvae alone. As authenticated barcodes for vouchered specimens of more pests become available, this approach has the potential to become a valuable in-country tool to support national capability in rapid and reliable pest diagnosis and identification.

Mapping global biodiversity connections with DNA barcodes: Lepidoptera of Pakistan

Sequences from the DNA barcode region of the mitochondrial COI gene are an effective tool for specimen identification and for the discovery of new species. The Barcode of Life Data Systems (BOLD) (www.boldsystems.org) currently hosts 4.5 million records from animals which have been assigned to more than 490,000 different Barcode Index Numbers (BINs), which serve as a proxy for species. Because a fourth of these BINs derive from Lepidoptera, BOLD has a strong capability to both identify specimens in this order and to support studies of faunal overlap. DNA barcode sequences were obtained from 4503 moths from 329 sites across Pakistan, specimens that represented 981 BINs from 52 families. Among 379 species with a Linnaean name assignment, all were represented by a single BIN excepting five species that showed a BIN split. Less than half (44%) of the 981 BINs had counterparts in other countries; the remaining BINs were unique to Pakistan. Another 218 BINs of Lepidoptera from Pakistan were coupled with the 981 from this study before being compared with all 116,768 BINs for this order. As expected, faunal overlap was highest with India (21%), Sri Lanka (21%), United Arab Emirates (20%) and with other Asian nations (2.1%), but it was very low with other continents including Africa (0.6%), Europe (1.3%), Australia (0.6%), Oceania (1.0%), North America (0.1%), and South America (0.1%). This study indicates the way in which DNA barcoding facilitates measures of faunal overlap even when taxa have not been assigned to a Linnean species.

A biodiversity hotspot for Microgastrinae (Hymenoptera, Braconidae) in North America: annotated species checklist for Ottawa, Canada

Microgastrinae wasps (Hymenoptera, Braconidae) from the city of Ottawa and its surroundings (a 50-km radius circle, ~7,800 km2) were studied based on 1,928 specimens collected between 1894 and 2010, and housed in the Canadian National Collection of Insects. A total of 158 species from 21 genera were identified, which is by far the highest number of species ever recorded for a locality in North America. An annotated checklist of species is provided.Choerasparasitellae(Bouché, 1834) andPholetesornanus(Reinhard, 1880) are recorded for the first time in the Nearctic (previously only known from the Palearctic region),Cotesiadepressa(Viereck, 1912) is recorded for the first time in Canada (previously only known from the United States), andCotesiahemileucae(Riley, 1881) andProtapantelesphlyctaeniae(Muesebeck, 1929) are recorded for the first time in the province of Ontario. In Ottawa the most diverse genera areCotesia,Apanteles,Microplitis,Pholetesor,Microgaster, andDolichogenidea, altogether comprising 77% of the species found in the area. A total of 73 species (46%) were represented by only one or two specimens, suggesting that the inventory for Ottawa is still relatively incomplete. Seasonal distribution showed several peaks of activity, in spring, summer, and early fall. That general pattern varied for individual species, with some showing a single peak of abundance either in the summer or towards the end of the season, others species attaining two peaks, in late spring and late summer, or in early summer and early fall, and yet others attaining up to three different peaks, in spring, summer and fall. At least 72 of the Microgastrinae species from Ottawa have been previously associated with 554 species of Lepidoptera as hosts – but those historical literature records are not always reliable and in many cases are based on data from areas beyond Ottawa. Thus, our knowledge of the associations between the 158 species of microgastrine parasitoids and the caterpillars of the 2,064 species of Lepidoptera recorded from Ottawa is still very incomplete.

A biodiversity hotspot for Microgastrinae (Hymenoptera, Braconidae) in North America: annotated species checklist for Ottawa, Canada

Microgastrinae wasps (Hymenoptera, Braconidae) from the city of Ottawa and its surroundings (a 50-km radius circle, ~7,800 km²) were studied based on 1,928 specimens collected between 1894 and 2010, and housed in the Canadian National Collection of Insects. A total of 158 species from 21 genera were identified, which is by far the highest number of species ever recorded for a locality in North America. An annotated checklist of species is provided. Choerasparasitellae (Bouché, 1834) and Pholetesornanus (Reinhard, 1880) are recorded for the first time in the Nearctic (previously only known from the Palearctic region), Cotesiadepressa (Viereck, 1912) is recorded for the first time in Canada (previously only known from the United States), and Cotesiahemileucae (Riley, 1881) and Protapantelesphlyctaeniae (Muesebeck, 1929) are recorded for the first time in the province of Ontario. In Ottawa the most diverse genera are Cotesia, Apanteles, Microplitis, Pholetesor, Microgaster, and Dolichogenidea, altogether comprising 77% of the species found in the area. A total of 73 species (46%) were represented by only one or two specimens, suggesting that the inventory for Ottawa is still relatively incomplete. Seasonal distribution showed several peaks of activity, in spring, summer, and early fall. That general pattern varied for individual species, with some showing a single peak of abundance either in the summer or towards the end of the season, others species attaining two peaks, in late spring and late summer, or in early summer and early fall, and yet others attaining up to three different peaks, in spring, summer and fall. At least 72 of the Microgastrinae species from Ottawa have been previously associated with 554 species of Lepidoptera as hosts – but those historical literature records are not always reliable and in many cases are based on data from areas beyond Ottawa. Thus, our knowledge of the associations between the 158 species of microgastrine parasitoids and the caterpillars of the 2,064 species of Lepidoptera recorded from Ottawa is still very incomplete.