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Stäb D, Wech T, Breuer FA, Weng AM, Ritter CO, Hahn D, Köstler H. High resolution myocardial first-pass perfusion imaging with extended anatomic coverage. J Magn Reson Imaging 2013; 39:1575-87. [DOI: 10.1002/jmri.24303] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2012] [Accepted: 06/04/2013] [Indexed: 11/08/2022] Open
Affiliation(s)
- Daniel Stäb
- Institute of Radiology; University of Würzburg; Würzburg Germany
| | - Tobias Wech
- Institute of Radiology; University of Würzburg; Würzburg Germany
| | - Felix A. Breuer
- Research Center Magnetic Resonance Bavaria (MRB); Würzburg Germany
| | - Andreas Max Weng
- Institute of Radiology; University of Würzburg; Würzburg Germany
- Comprehensive Heart Failure Center (CHFC); Würzburg Germany
| | | | - Dietbert Hahn
- Institute of Radiology; University of Würzburg; Würzburg Germany
| | - Herbert Köstler
- Institute of Radiology; University of Würzburg; Würzburg Germany
- Comprehensive Heart Failure Center (CHFC); Würzburg Germany
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102
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Feng L, Grimm R, Block KT, Chandarana H, Kim S, Xu J, Axel L, Sodickson DK, Otazo R. Golden-angle radial sparse parallel MRI: combination of compressed sensing, parallel imaging, and golden-angle radial sampling for fast and flexible dynamic volumetric MRI. Magn Reson Med 2013; 72:707-17. [PMID: 24142845 DOI: 10.1002/mrm.24980] [Citation(s) in RCA: 446] [Impact Index Per Article: 40.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2013] [Revised: 09/12/2013] [Accepted: 09/12/2013] [Indexed: 12/25/2022]
Abstract
PURPOSE To develop a fast and flexible free-breathing dynamic volumetric MRI technique, iterative Golden-angle RAdial Sparse Parallel MRI (iGRASP), that combines compressed sensing, parallel imaging, and golden-angle radial sampling. METHODS Radial k-space data are acquired continuously using the golden-angle scheme and sorted into time series by grouping an arbitrary number of consecutive spokes into temporal frames. An iterative reconstruction procedure is then performed on the undersampled time series where joint multicoil sparsity is enforced by applying a total-variation constraint along the temporal dimension. Required coil-sensitivity profiles are obtained from the time-averaged data. RESULTS iGRASP achieved higher acceleration capability than either parallel imaging or coil-by-coil compressed sensing alone. It enabled dynamic volumetric imaging with high spatial and temporal resolution for various clinical applications, including free-breathing dynamic contrast-enhanced imaging in the abdomen of both adult and pediatric patients, and in the breast and neck of adult patients. CONCLUSION The high performance and flexibility provided by iGRASP can improve clinical studies that require robustness to motion and simultaneous high spatial and temporal resolution. Magn Reson Med 72:707-717, 2014. © 2013 Wiley Periodicals, Inc.
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Affiliation(s)
- Li Feng
- Bernard and Irene Schwartz Center for Biomedical Imaging, New York University School of Medicine New York, New York, USA; Sackler Institute of Graduate Biomedical Sciences, New York University School of Medicine New York, New York, USA
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103
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Schnell S, Markl M, Entezari P, Mahadewia RJ, Semaan E, Stankovic Z, Collins J, Carr J, Jung B. k-t GRAPPA accelerated four-dimensional flow MRI in the aorta: effect on scan time, image quality, and quantification of flow and wall shear stress. Magn Reson Med 2013; 72:522-33. [PMID: 24006309 DOI: 10.1002/mrm.24925] [Citation(s) in RCA: 70] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2013] [Revised: 06/27/2013] [Accepted: 07/28/2013] [Indexed: 01/29/2023]
Abstract
PURPOSE The purpose of this study was to evaluate the utility of k-t parallel imaging for accelerating aortic four-dimensional (4D)-flow MRI. The aim was to systematically investigate the impact of different acceleration factors and number of coil elements on acquisition time, image quality and quantification of hemodynamic parameters. METHODS k-t accelerated 4D-flow MRI (spatial/temporal resolution = 2.1 × 2.5 × 2.5 mm/40.0 ms) was acquired in 10 healthy volunteers with acceleration factors R = 3, 5, and 8 using 12- and 32-channel receiver coils. Results were compared with conventional parallel imaging (GRAPPA [generalized autocalibrating partial parallel acquisition], R = 2). Data analysis included radiological grading of three-dimensional blood flow visualization quality as well as quantification of blood flow, velocities and wall shear stress (WSS). RESULTS k-t GRAPPA significantly reduced scan time by 28%, 54%, and 68%, for R = 3, 5, and 8, respectively, while maintaining image quality as demonstrated by overall similar image quality grading. Significant differences in peak WSS (diff12ch = -5.9%, diff32ch = 18.5%) and mean WSS (diff32ch = 13.9%) were found at the descending aorta for both receiver coils for R = 5 (PWSS < 0.04). Peak velocity differed for R=8 at the aortic root (-7.4%) and descending aorta (-12%) with PpeakVelo < 0.03. CONCLUSION k-t GRAPPA acceleration with a 12- or 32-channel receiver coil and an acceleration of 3 or 5 can compete with a standard GRAPPA R = 2 acceleration.
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Affiliation(s)
- Susanne Schnell
- Department of Radiology, Northwestern University, Chicago, Illinois, USA
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104
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Xu J, Kim D, Otazo R, Srichai MB, Lim RP, Axel L, Mcgorty KA, Niendorf T, Sodickson DK. Towards a five-minute comprehensive cardiac MR examination using highly accelerated parallel imaging with a 32-element coil array: feasibility and initial comparative evaluation. J Magn Reson Imaging 2013; 38:180-8. [PMID: 23197471 PMCID: PMC3615039 DOI: 10.1002/jmri.23955] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2012] [Accepted: 10/11/2012] [Indexed: 11/11/2022] Open
Abstract
PURPOSE To evaluate the feasibility and perform initial comparative evaluations of a 5-minute comprehensive whole-heart magnetic resonance imaging (MRI) protocol with four image acquisition types: perfusion (PERF), function (CINE), coronary artery imaging (CAI), and late gadolinium enhancement (LGE). MATERIALS AND METHODS This study protocol was Health Insurance Portability and Accountability Act (HIPAA)-compliant and Institutional Review Board-approved. A 5-minute comprehensive whole-heart MRI examination protocol (Accelerated) using 6-8-fold-accelerated volumetric parallel imaging was incorporated into and compared with a standard 2D clinical routine protocol (Standard). Following informed consent, 20 patients were imaged with both protocols. Datasets were reviewed for image quality using a 5-point Likert scale (0 = non-diagnostic, 4 = excellent) in blinded fashion by two readers. RESULTS Good image quality with full whole-heart coverage was achieved using the accelerated protocol, particularly for CAI, although significant degradations in quality, as compared with traditional lengthy examinations, were observed for the other image types. Mean total scan time was significantly lower for the Accelerated as compared to Standard protocols (28.99 ± 4.59 min vs. 1.82 ± 0.05 min, P < 0.05). Overall image quality for the Standard vs. Accelerated protocol was 3.67 ± 0.29 vs. 1.5 ± 0.51 (P < 0.005) for PERF, 3.48 ± 0.64 vs. 2.6 ± 0.68 (P < 0.005) for CINE, 2.35 ± 1.01 vs. 2.48 ± 0.68 (P = 0.75) for CAI, and 3.67 ± 0.42 vs. 2.67 ± 0.84 (P < 0.005) for LGE. Diagnostic image quality for Standard vs. Accelerated protocols was 20/20 (100%) vs. 10/20 (50%) for PERF, 20/20 (100%) vs. 18/20 (90%) for CINE, 18/20 (90%) vs. 18/20 (90%) for CAI, and 20/20 (100%) vs. 18/20 (90%) for LGE. CONCLUSION This study demonstrates the technical feasibility and promising image quality of 5-minute comprehensive whole-heart cardiac examinations, with simplified scan prescription and high spatial and temporal resolution enabled by highly parallel imaging technology. The study also highlights technical hurdles that remain to be addressed. Although image quality remained diagnostic for most scan types, the reduced image quality of PERF, CINE, and LGE scans in the Accelerated protocol remain a concern.
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Affiliation(s)
- Jian Xu
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
- PolyTechnic Institute of New York University, Brooklyn, New York, NY, USA
- Siemens Medical Solutions USA Inc., New York, NY, USA
| | - Daniel Kim
- Radiology, The University of Utah, Salt Lake City, Utah, USA
| | - Ricardo Otazo
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
| | - Monvadi B. Srichai
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
| | - Ruth. P. Lim
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
| | - Leon Axel
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
| | - Kelly Anne Mcgorty
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
| | | | - Daniel K. Sodickson
- Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, USA
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Ferreira PF, Gatehouse PD, Mohiaddin RH, Firmin DN. Cardiovascular magnetic resonance artefacts. J Cardiovasc Magn Reson 2013; 15:41. [PMID: 23697969 PMCID: PMC3674921 DOI: 10.1186/1532-429x-15-41] [Citation(s) in RCA: 104] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2012] [Accepted: 04/17/2013] [Indexed: 12/29/2022] Open
Abstract
The multitude of applications offered by CMR make it an increasing popular modality to study the heart and the surrounding vessels. Nevertheless the anatomical complexity of the chest, together with cardiac and respiratory motion, and the fast flowing blood, present many challenges which can possibly translate into imaging artefacts. The literature is wide in terms of papers describing specific MR artefacts in great technical detail. In this review we attempt to summarise, in a language accessible to a clinical readership, some of the most common artefacts found in CMR applications. It begins with an introduction of the most common pulse sequences, and imaging techniques, followed by a brief section on typical cardiovascular applications. This leads to the main section on common CMR artefacts with examples, a short description of the mechanisms behind them, and possible solutions.
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Affiliation(s)
- Pedro F Ferreira
- National Heart and Lung Institute, Imperial College, London, UK
- Royal Brompton Hospital, London, UK
| | - Peter D Gatehouse
- National Heart and Lung Institute, Imperial College, London, UK
- Royal Brompton Hospital, London, UK
| | - Raad H Mohiaddin
- National Heart and Lung Institute, Imperial College, London, UK
- Royal Brompton Hospital, London, UK
| | - David N Firmin
- National Heart and Lung Institute, Imperial College, London, UK
- Royal Brompton Hospital, London, UK
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A historical overview of magnetic resonance imaging, focusing on technological innovations. Invest Radiol 2013; 47:725-41. [PMID: 23070095 DOI: 10.1097/rli.0b013e318272d29f] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Magnetic resonance imaging (MRI) has now been used clinically for more than 30 years. Today, MRI serves as the primary diagnostic modality for many clinical problems. In this article, historical developments in the field of MRI will be discussed with a focus on technological innovations. Topics include the initial discoveries in nuclear magnetic resonance that allowed for the advent of MRI as well as the development of whole-body, high field strength, and open MRI systems. Dedicated imaging coils, basic pulse sequences, contrast-enhanced, and functional imaging techniques will also be discussed in a historical context. This article describes important technological innovations in the field of MRI, together with their clinical applicability today, providing critical insights into future developments.
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107
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Free Breathing Real-Time Cardiac Cine Imaging With Improved Spatial Resolution at 3 T. Invest Radiol 2013; 48:158-66. [DOI: 10.1097/rli.0b013e31827f1b68] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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108
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Bender JA, Ahmad R, Simonetti OP. The Importance of k-Space Trajectory on Off-Resonance Artifact in Segmented Echo-Planar Imaging. CONCEPTS IN MAGNETIC RESONANCE. PART A, BRIDGING EDUCATION AND RESEARCH 2013; 42A:10.1002/cmr.a.21255. [PMID: 24358026 PMCID: PMC3864862 DOI: 10.1002/cmr.a.21255] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Segmented interleaved echo planar imaging (EPI) is a highly efficient data acquisition technique; however, EPI is sensitive to artifacts from off-resonance spins. The choice of k-space trajectories is important in determining how off-resonance spins contribute to image artifacts. Top-down and center-out trajectories are theoretically analyzed, simulated, implemented, and tested in phantom and volunteer experiments. Theoretical results show off-resonance artifact manifests as a simple positional shift for the top-down trajectory, while for the center-out trajectory off-resonance artifact manifests as a splitting of the object, which entails both shift and blurring. These results were validated using simulation and phantom scan data where a frequency-offset was introduced ranging from -300 Hz to +300 Hz. As predicted by the theoretical results, inferior image quality was observed for the center-out trajectory in a single volunteer. Off-resonance produces more severe and complex artifacts with the center-out trajectory than the top-down trajectory.
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Affiliation(s)
- Jacob A Bender
- Department of Biomedical Engineering, The Ohio State University, Columbus, OH ; Dorothy M. Davis Heart and Lung Research Institute, The Ohio State University, Columbus, OH
| | - Rizwan Ahmad
- Dorothy M. Davis Heart and Lung Research Institute, The Ohio State University, Columbus, OH ; Department of Electrical and Computer Engineering, The Ohio State University, Columbus, OH
| | - Orlando P Simonetti
- Department of Biomedical Engineering, The Ohio State University, Columbus, OH ; Dorothy M. Davis Heart and Lung Research Institute, The Ohio State University, Columbus, OH ; Department of Internal Medicine, Division of Cardiovascular Medicine, The Ohio State University, Columbus, OH ; Department of Radiology, The Ohio State University, Columbus, OH
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High-resolution cine MRI with TGRAPPA for fast assessment of left ventricular function at 3 Tesla. Eur J Radiol 2013; 82:e219-24. [PMID: 23352697 DOI: 10.1016/j.ejrad.2012.12.019] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2012] [Revised: 12/13/2012] [Accepted: 12/21/2012] [Indexed: 11/21/2022]
Abstract
PURPOSE To implement and evaluate the accuracy of multislice dual-breath hold cine MR for analysis of global systolic and diastolic left ventricular function at 3T. MATERIALS AND METHODS 25 patients referred to cardiac MR underwent cine imaging at 3T (MAGNETOM Verio) using prospective triggered SSFP (TR 3.1 ms; TE 1.4 ms; FA 60°). Analysis of LV function was performed using a standard non-accelerated single-slice approach (STD) with multiple breath-holds and an accelerated multi-slice technique (TGRAPPA; R=4) encompassing the ventricles with 5 slices/breath-hold. Parameters of spatial and temporal resolution were kept identical (pixel: 1.9 × 2.5 mm(2); temporal resolution: 47 ms). Data of both acquisition techniques were analyzed by two readers using semiautomatic algorithms (syngoARGUS) with respect to EDV, ESV, EF, myocardial mass (MM), peak filling rate (PFR) and peak ejection rate (PER) including assessment of interobserver agreement. RESULTS Volumetric results of the TGRAPPA approach did not show significant differences to the STD approach for left ventricular ejection fraction (62.3 ± 10.6 vs. 61.0 ± 8.4, P=0.2), end-diastolic volume (135.8 ± 47.5 vs. 130.8 ± 46.4, P=0.07), endsystolic volume (53.0 ± 29.7 vs. 53.1 ± 32.7, P=0.99) and myocardial mass (114.2 ± 32.5 vs. 114.6±30.6, P=0.9). Moreover, a comparison of peak ejection rate (601.3 ± 190.2 vs. 590.8 ± 218.2, P=0.8) and peak filling rate (535.1±191.2 vs. 535.4 ± 210.7, P=0.99) did not reveal significant differences between the two groups. Limits in interobserver agreement were low for all systolic and diastolic parameters in both groups (P ≥ 0.05). Total acquisition time for STD was 273 ± 124 s and 34 ± 5 s for TGRAPPA (P ≤ 0.001). Evaluation time for standard and multislice approach was equal (10.8 ± 1.4 vs. 9.8 ± 2.1 min; P=0.08).
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Abstract
In recent years, there has been an explosive growth of magnetic resonance imaging (MRI) techniques that allow faster scan speed by exploiting temporal or spatiotemporal redundancy of the images. These techniques improve the performance of dynamic imaging significantly across multiple clinical applications, including cardiac functional examinations, perfusion imaging, blood flow assessment, contrast-enhanced angiography, functional MRI, and interventional imaging, among others. The scan acceleration permits higher spatial resolution, increased temporal resolution, shorter scan duration, or a combination of these benefits. Along with the exciting developments is a dizzying proliferation of acronyms and variations of the techniques. The present review attempts to summarize this rapidly growing topic and presents conceptual frameworks to understand these techniques in terms of their underlying mechanics and connections. Techniques from view sharing, keyhole, k-t, to compressed sensing are covered.
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Affiliation(s)
- Jeffrey Tsao
- Novartis Institutes for BioMedical Research, Cambridge, Massachusetts, USA.
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Pawar K, Egan GF, Zhang J. Accelerating k-t sparse using k-space aliasing for dynamic MRI imaging. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2013; 2013:2619-2623. [PMID: 24110264 DOI: 10.1109/embc.2013.6610077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Dynamic imaging is challenging in MRI and acceleration techniques are usually needed to acquire dynamic scene. K-t sparse is an acceleration technique based on compressed sensing, it acquires fewer amounts of data in k-t space by pseudo random ordering of phase encodes and reconstructs dynamic scene by exploiting sparsity of k-t space in transform domain. Another recently introduced technique accelerates dynamic MRI scans by acquiring k-space data in aliased form. K-space aliasing technique uses multiple RF excitation pulses to deliberately acquire aliased k-space data. During reconstruction a simple Fourier transformation along time frames can unaliase the acquired aliased data. This paper presents a novel method to combine k-t sparse and k-space aliasing to achieve higher acceleration than each of the individual technique alone. In this particular combination, a very critical factor of compressed sensing, the ratio of the number of acquired phase encodes to the number of total phase encode (n/N) increases therefore compressed sensing component of reconstruction performs exceptionally well. Comparison of k-t sparse and the proposed technique for acceleration factors of 4, 6 and 8 is demonstrated in simulation on cardiac data.
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Ding Y, Xue H, Ahmad R, Ting ST, Simonetti OP. SC-GRAPPA: Self-constraint noniterative GRAPPA reconstruction with closed-form solution. Med Phys 2012; 39:7686-93. [PMID: 23231316 DOI: 10.1118/1.4768162] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Parallel MRI (pMRI) reconstruction techniques are commonly used to reduce scan time by undersampling the k-space data. GRAPPA, a k-space based pMRI technique, is widely used clinically because of its robustness. In GRAPPA, the missing k-space data are estimated by solving a set of linear equations; however, this set of equations does not take advantage of the correlations within the missing k-space data. All k-space data in a neighborhood acquired from a phased-array coil are correlated. The correlation can be estimated easily as a self-constraint condition, and formulated as an extra set of linear equations to improve the performance of GRAPPA. The authors propose a modified k-space based pMRI technique called self-constraint GRAPPA (SC-GRAPPA) which combines the linear equations of GRAPPA with these extra equations to solve for the missing k-space data. Since SC-GRAPPA utilizes a least-squares solution of the linear equations, it has a closed-form solution that does not require an iterative solver. METHODS The SC-GRAPPA equation was derived by incorporating GRAPPA as a prior estimate. SC-GRAPPA was tested in a uniform phantom and two normal volunteers. MR real-time cardiac cine images with acceleration rate 5 and 6 were reconstructed using GRAPPA and SC-GRAPPA. RESULTS SC-GRAPPA showed a significantly lower artifact level, and a greater than 10% overall signal-to-noise ratio (SNR) gain over GRAPPA, with more significant SNR gain observed in low-SNR regions of the images. CONCLUSIONS SC-GRAPPA offers improved pMRI reconstruction, and is expected to benefit clinical imaging applications in the future.
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Affiliation(s)
- Yu Ding
- Davis Heart and Lung Research Institute, The Ohio State University, Columbus, OH, USA
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113
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Abstract
Parallel imaging is a robust method for accelerating the acquisition of magnetic resonance imaging (MRI) data, and has made possible many new applications of MR imaging. Parallel imaging works by acquiring a reduced amount of k-space data with an array of receiver coils. These undersampled data can be acquired more quickly, but the undersampling leads to aliased images. One of several parallel imaging algorithms can then be used to reconstruct artifact-free images from either the aliased images (SENSE-type reconstruction) or from the undersampled data (GRAPPA-type reconstruction). The advantages of parallel imaging in a clinical setting include faster image acquisition, which can be used, for instance, to shorten breath-hold times resulting in fewer motion-corrupted examinations. In this article the basic concepts behind parallel imaging are introduced. The relationship between undersampling and aliasing is discussed and two commonly used parallel imaging methods, SENSE and GRAPPA, are explained in detail. Examples of artifacts arising from parallel imaging are shown and ways to detect and mitigate these artifacts are described. Finally, several current applications of parallel imaging are presented and recent advancements and promising research in parallel imaging are briefly reviewed.
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Affiliation(s)
- Anagha Deshmane
- Department of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio, USA
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114
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Feng X, Salerno M, Kramer CM, Meyer CH. Kalman filter techniques for accelerated Cartesian dynamic cardiac imaging. Magn Reson Med 2012; 69:1346-56. [PMID: 22926804 DOI: 10.1002/mrm.24375] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2011] [Revised: 04/16/2012] [Accepted: 05/24/2012] [Indexed: 11/12/2022]
Abstract
In dynamic MRI, spatial and temporal parallel imaging can be exploited to reduce scan time. Real-time reconstruction enables immediate visualization during the scan. Commonly used view-sharing techniques suffer from limited temporal resolution, and many of the more advanced reconstruction methods are either retrospective, time-consuming, or both. A Kalman filter model capable of real-time reconstruction can be used to increase the spatial and temporal resolution in dynamic MRI reconstruction. The original study describing the use of the Kalman filter in dynamic MRI was limited to non-Cartesian trajectories because of a limitation intrinsic to the dynamic model used in that study. Here the limitation is overcome, and the model is applied to the more commonly used Cartesian trajectory with fast reconstruction. Furthermore, a combination of the Kalman filter model with Cartesian parallel imaging is presented to further increase the spatial and temporal resolution and signal-to-noise ratio. Simulations and experiments were conducted to demonstrate that the Kalman filter model can increase the temporal resolution of the image series compared with view-sharing techniques and decrease the spatial aliasing compared with TGRAPPA. The method requires relatively little computation, and thus is suitable for real-time reconstruction.
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Affiliation(s)
- Xue Feng
- Department of Biomedical Engineering, University of Virginia, Charlottesville, Virginia 22908, USA
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Feng L, Srichai MB, Lim RP, Harrison A, King W, Adluru G, Dibella EVR, Sodickson DK, Otazo R, Kim D. Highly accelerated real-time cardiac cine MRI using k-t SPARSE-SENSE. Magn Reson Med 2012; 70:64-74. [PMID: 22887290 DOI: 10.1002/mrm.24440] [Citation(s) in RCA: 156] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Revised: 06/20/2012] [Accepted: 07/03/2012] [Indexed: 01/19/2023]
Abstract
For patients with impaired breath-hold capacity and/or arrhythmias, real-time cine MRI may be more clinically useful than breath-hold cine MRI. However, commercially available real-time cine MRI methods using parallel imaging typically yield relatively poor spatio-temporal resolution due to their low image acquisition speed. We sought to achieve relatively high spatial resolution (∼2.5 × 2.5 mm(2)) and temporal resolution (∼40 ms), to produce high-quality real-time cine MR images that could be applied clinically for wall motion assessment and measurement of left ventricular function. In this work, we present an eightfold accelerated real-time cardiac cine MRI pulse sequence using a combination of compressed sensing and parallel imaging (k-t SPARSE-SENSE). Compared with reference, breath-hold cine MRI, our eightfold accelerated real-time cine MRI produced significantly worse qualitative grades (1-5 scale), but its image quality and temporal fidelity scores were above 3.0 (adequate) and artifacts and noise scores were below 3.0 (moderate), suggesting that acceptable diagnostic image quality can be achieved. Additionally, both eightfold accelerated real-time cine and breath-hold cine MRI yielded comparable left ventricular function measurements, with coefficient of variation <10% for left ventricular volumes. Our proposed eightfold accelerated real-time cine MRI with k-t SPARSE-SENSE is a promising modality for rapid imaging of myocardial function.
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Affiliation(s)
- Li Feng
- Department of Radiology, The Bernard and Irene Schwartz Center for Biomedical Imaging, New York University School of Medicine, New York, New York 10016, USA.
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Ratnayaka K, Faranesh AZ, Hansen MS, Stine AM, Halabi M, Barbash IM, Schenke WH, Wright VJ, Grant LP, Kellman P, Kocaturk O, Lederman RJ. Real-time MRI-guided right heart catheterization in adults using passive catheters. Eur Heart J 2012; 34:380-9. [PMID: 22855740 DOI: 10.1093/eurheartj/ehs189] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
AIMS Real-time MRI creates images with superb tissue contrast that may enable radiation-free catheterization. Simple procedures are the first step towards novel interventional procedures. We aim to perform comprehensive transfemoral diagnostic right heart catheterization in an unselected cohort of patients entirely using MRI guidance. METHODS AND RESULTS We performed X-ray and MRI-guided transfemoral right heart catheterization in consecutive patients undergoing clinical cardiac catheterization. We sampled both cavae and both pulmonary arteries. We compared success rate, time to perform key steps, and catheter visibility among X-ray and MRI procedures using air-filled or gadolinium-filled balloon-tipped catheters. Sixteen subjects (four with shunt, nine with coronary artery disease, three with other) underwent paired X-ray and MRI catheterization. Complete guidewire-free catheterization was possible in 15 of 16 under both. MRI using gadolinium-filled balloons was at least as successful as X-ray in all procedure steps, more successful than MRI using air-filled balloons, and better than both in entering the left pulmonary artery. Total catheterization time and individual procedure steps required approximately the same amount of time irrespective of image guidance modality. Catheter conspicuity was best under X-ray and next-best using gadolinium-filled MRI balloons. CONCLUSION In this early experience, comprehensive transfemoral right heart catheterization appears feasible using only MRI for imaging guidance. Gadolinium-filled balloon catheters were more conspicuous than air-filled ones. Further workflow and device enhancement are necessary for clinical adoption.
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Affiliation(s)
- Kanishka Ratnayaka
- Division of Intramural Research, Cardiovascular and Pulmonary Branch, National Heart Lung and Blood Institute, National Institutes of Health, Building 10, Room 2c713, MSC 1538, Bethesda, MD 20892-1538, USA
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Holdsworth SJ, Aksoy M, Newbould RD, Yeom K, Van AT, Ooi MB, Barnes PD, Bammer R, Skare S. Diffusion tensor imaging (DTI) with retrospective motion correction for large-scale pediatric imaging. J Magn Reson Imaging 2012; 36:961-71. [PMID: 22689498 DOI: 10.1002/jmri.23710] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2012] [Accepted: 04/30/2012] [Indexed: 11/06/2022] Open
Abstract
PURPOSE To develop and implement a clinical DTI technique suitable for the pediatric setting that retrospectively corrects for large motion without the need for rescanning and/or reacquisition strategies, and to deliver high-quality DTI images (both in the presence and absence of large motion) using procedures that reduce image noise and artifacts. MATERIALS AND METHODS We implemented an in-house built generalized autocalibrating partially parallel acquisitions (GRAPPA)-accelerated diffusion tensor (DT) echo-planar imaging (EPI) sequence at 1.5T and 3T on 1600 patients between 1 month and 18 years old. To reconstruct the data, we developed a fully automated tailored reconstruction software that selects the best GRAPPA and ghost calibration weights; does 3D rigid-body realignment with importance weighting; and employs phase correction and complex averaging to lower Rician noise and reduce phase artifacts. For select cases we investigated the use of an additional volume rejection criterion and b-matrix correction for large motion. RESULTS The DTI image reconstruction procedures developed here were extremely robust in correcting for motion, failing on only three subjects, while providing the radiologists high-quality data for routine evaluation. CONCLUSION This work suggests that, apart from the rare instance of continuous motion throughout the scan, high-quality DTI brain data can be acquired using our proposed integrated sequence and reconstruction that uses a retrospective approach to motion correction. In addition, we demonstrate a substantial improvement in overall image quality by combining phase correction with complex averaging, which reduces the Rician noise that biases noisy data.
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Giese D, Schaeffter T, Kozerke S. Highly undersampled phase-contrast flow measurements using compartment-based k-t principal component analysis. Magn Reson Med 2012; 69:434-43. [PMID: 22528878 DOI: 10.1002/mrm.24273] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2011] [Revised: 02/28/2012] [Accepted: 03/03/2012] [Indexed: 11/06/2022]
Abstract
The applicability of cine blood flow measurements in a clinical setting is often compromised by the long scan times associated with phase-contrast imaging. In this work, we propose an extension to the k-t principal component analysis method and demonstrate that by definition of spatial compartment-dependent temporal basis functions, significant improvements in reconstruction accuracy can be achieved relative to the original k-t principal component analysis and k-t SENSE formulations. Using this method, it is shown that prospective nominal undersampling of up to 16 corresponding to a net acceleration factor of 8 including training data acquisition can be realized while keeping the error in stroke volume below 5%. As a practical application, the acquisition of cine flow data in the aorta is demonstrated permitting assessment of two-dimensional velocity images and pulse wave velocities at 100 frames per second in a single breathhold per slice.
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Affiliation(s)
- Daniel Giese
- Institute for Biomedical Engineering, University and ETH Zurich, Zurich, Switzerland.
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119
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Lin HY, Bender JA, Ding Y, Chung YC, Hinton AM, Pennell ML, Whitehead KK, Raman SV, Simonetti OP. Shared velocity encoding: a method to improve the temporal resolution of phase-contrast velocity measurements. Magn Reson Med 2011; 68:703-10. [PMID: 22139889 DOI: 10.1002/mrm.23273] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2011] [Revised: 10/04/2011] [Accepted: 10/05/2011] [Indexed: 11/09/2022]
Abstract
Phase-contrast magnetic resonance imaging (PC-MRI) is used routinely to measure fluid and tissue velocity with a variety of clinical applications. Phase-contrast magnetic resonance imaging methods require acquisition of additional data to enable phase difference reconstruction, making real-time imaging problematic. Shared Velocity Encoding (SVE), a method devised to improve the effective temporal resolution of phase-contrast magnetic resonance imaging, was implemented in a real-time pulse sequence with segmented echo planar readout. The effect of SVE on peak velocity measurement was investigated in computer simulation, and peak velocities and total flow were measured in a flow phantom and in volunteers and compared with a conventional ECG-triggered, segmented k-space phase-contrast sequence as a reference standard. Computer simulation showed a 36% reduction in peak velocity error from 8.8 to 5.6% with SVE. A similar reduction of 40% in peak velocity error was shown in a pulsatile flow phantom. In the phantom and volunteers, volume flow did not differ significantly when measured with or without SVE. Peak velocity measurements made in the volunteers using SVE showed a higher concordance correlation (0.96) with the reference standard than non-SVE (0.87). The improvement in effective temporal resolution with SVE reconstruction has a positive impact on the precision and accuracy of real-time phase-contrast magnetic resonance imaging peak velocity measurements.
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Affiliation(s)
- Hung-Yu Lin
- Department of Biomedical Engineering, The Ohio State University, Columbus, Ohio, USA
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120
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Motion compensated magnetic resonance reconstruction using inverse-consistent deformable registration: application to real-time cine imaging. ACTA ACUST UNITED AC 2011. [PMID: 22003663 DOI: 10.1007/978-3-642-23623-5_71] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
Abstract
Patient motion is a major limitation for magnetic resonance imaging. Recent theoretical advances incorporate explicit rigid and non-rigid motion compensation into conventional image reconstruction for multi-shot acquisitions and recover motion-free images by solving a general matrix inversion problem. Although the theory has been established, applications are rare due to the challenges of estimating motion field for every pixel of every shot. In this paper we propose a method to overcome this difficulty using the inverse-consistent deformable registration supplying both forward and backward deformations for matrix inversion. We further extend this framework for multi-coil motion compensated image reconstruction using the eigen-mode analysis. Both simulations and in vivo studies demonstrate the effectiveness of our approach.
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Miao J, Wong WCK, Narayan S, Huo D, Wilson DL. Modeling non-stationarity of kernel weights for k-space reconstruction in partially parallel imaging. Med Phys 2011; 38:4760-73. [PMID: 21928649 DOI: 10.1118/1.3611075] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE In partially parallel imaging, most k-space-based reconstruction algorithms such as GRAPPA adopt a single finite-size kernel to approximate the true relationship between sampled and nonsampled signals. However, the estimation of this kernel based on k-space signals is imperfect, and the authors are investigating methods dealing with local variation of k-space signals. METHODS To model nonstationarity of kernel weights, similar to performing a spatially adaptive regularization, the authors fit a set of linear functions using concepts from geographically weighted regression, a methodology used in geophysical analysis. Instead of a reconstruction with a single set of kernel weights, the authors use multiple sets. A missing signal is reconstructed with its kernel weights set determined by k-space clustering. Simulated and acquired MR data with several different image content and acquisition schemes, including MR tagging, were tested. A perceptual difference model (Case-PDM) was used to quantitatively evaluate the quality of over 1000 test images, and to optimize the parameters of our algorithm. RESULTS A MOdeling Non-stationarity of KErnel wEightS ("MONKEES") reconstruction with two sets of kernel weights gave reconstructions with significantly better image quality than the original GRAPPA in all test images. Using more sets produced improved image quality but with diminishing returns. As a rule of thumb, at least two sets of kernel weights, one from low- and the other from high frequency k-space, should be used. CONCLUSIONS The authors conclude that the MONKEES can significantly and robustly improve the image quality in parallel MR imaging, particularly, cardiac imaging.
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Affiliation(s)
- Jun Miao
- Department of Biomedical Engineering, Case Western Reserve University, Cleveland, Ohio 44106, USA
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Wech T, Lemke A, Medway D, Stork LA, Lygate CA, Neubauer S, Köstler H, Schneider JE. Accelerating cine-MR imaging in mouse hearts using compressed sensing. J Magn Reson Imaging 2011; 34:1072-9. [PMID: 21932360 PMCID: PMC3261377 DOI: 10.1002/jmri.22718] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2011] [Accepted: 06/20/2011] [Indexed: 12/23/2022] Open
Abstract
Purpose To combine global cardiac function imaging with compressed sensing (CS) in order to reduce scan time and to validate this technique in normal mouse hearts and in a murine model of chronic myocardial infarction. Materials and Methods To determine the maximally achievable acceleration factor, fully acquired cine data, obtained in sham and chronically infarcted (MI) mouse hearts were 2–4-fold undersampled retrospectively, followed by CS reconstruction and blinded image segmentation. Subsequently, dedicated CS sampling schemes were implemented at a preclinical 9.4 T magnetic resonance imaging (MRI) system, and 2- and 3-fold undersampled cine data were acquired in normal mouse hearts with high temporal and spatial resolution. Results The retrospective analysis demonstrated that an undersampling factor of three is feasible without impairing accuracy of cardiac functional parameters. Dedicated CS sampling schemes applied prospectively to normal mouse hearts yielded comparable left-ventricular functional parameters, and intra- and interobserver variability between fully and 3-fold undersampled data. Conclusion This study introduces and validates an alternative means to speed up experimental cine-MRI without the need for expensive hardware. J. Magn. Reson. Imaging 2011. © 2011 Wiley Periodicals, Inc.
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Affiliation(s)
- Tobias Wech
- Institute of Radiology, University of Würzburg, Würzburg, Germany
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Foster EL, Arnold JW, Jekic M, Bender JA, Balasubramanian V, Thavendiranathan P, Dickerson JA, Raman SV, Simonetti OP. MR-compatible treadmill for exercise stress cardiac magnetic resonance imaging. Magn Reson Med 2011; 67:880-9. [PMID: 22190228 DOI: 10.1002/mrm.23059] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2010] [Revised: 04/23/2011] [Accepted: 05/25/2011] [Indexed: 11/11/2022]
Abstract
This article describes an MR-safe treadmill that enables cardiovascular exercise stress testing adjacent to the MRI system, facilitating cardiac MR imaging immediately following exercise stress. The treadmill was constructed of nonferromagnetic components utilizing a hydraulic power system. Computer control ensured precise execution of the standard Bruce treadmill protocol commonly used for cardiovascular exercise stress testing. The treadmill demonstrated no evidence of ferromagnetic attraction and did not affect image quality. Treadmill performance met design specifications both inside and outside the MRI environment. Ten healthy volunteers performed the Bruce protocol with the treadmill positioned adjacent to the MRI table. Upon reaching peak stress (98 ± 8% of age-predicted maximum heart rate), the subjects lay down directly on the MRI table, a cardiac array coil was placed, an intravenous line connected, and stress cine and perfusion imaging performed. Cine imaging commenced on average within 24 ± 4 s and was completed within 40 ± 7 s of the end of exercise. Subject heart rates were 86 ± 9% of age-predicted maximum heart rate at the start of imaging and 81 ± 9% of age-predicted maximum heart rate upon completion of cine imaging. The MRI-compatible treadmill was shown to operate safely and effectively in the MRI environment.
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Affiliation(s)
- Eric L Foster
- Dorothy M. Davis Heart and Lung Research Institute, The Ohio State University, Columbus, Ohio, USA
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Ramirez L, Prieto C, Sing-Long C, Uribe S, Batchelor P, Tejos C, Irarrazaval P. TRIO a technique for reconstruction using intensity order: application to undersampled MRI. IEEE TRANSACTIONS ON MEDICAL IMAGING 2011; 30:1566-1576. [PMID: 21435972 DOI: 10.1109/tmi.2011.2132139] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Long acquisition times are still a limitation for many applications of magnetic resonance imaging (MRI), specially in 3-D and dynamic imaging. Several undersampling reconstruction techniques have been proposed to overcome this problem. These techniques are based on acquiring less samples than specified by the Nyquist criterion and estimating the nonacquired data by using some sort of prior information. Most of these reconstruction methods use prior information based on estimations of the pixel intensities of the images and therefore they are prone to introduce spatial or temporal blurring. Instead of using the pixel intensities, we propose to use information that allows us to sort the pixels of an image from darkest to brightest. The set of order relations which sort the pixels of an image has been called intensity order. The intensity order of an image can be estimated from low-resolution images, adjacent slices in volumetric acquisitions, temporal correlation in dynamic sequences or from prior reconstructions. Our technique for reconstruction using intensity order (TRIO) consists of looking for an image that satisfies the intensity order and minimizes the discrepancy between the acquired and reconstructed data. Results show that TRIO can effectively reconstruct 2-D-cine cardiac MR images (under-sampling factor of 4), estimating correctly the temporal evolution of the objects. Furthermore, TRIO is used as a second stage reconstruction after reconstructing with other techniques, keyhole, sliding window and k-t BLAST, to estimate the order information. In all cases the images are improved by TRIO.
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Affiliation(s)
- Leonardo Ramirez
- Departamento de Ingeniería Eléctrica and the Biomedical Imaging Center, Pontificia Universidad Católica de Chile, Santiago, Chile.
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125
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Gutberlet M, Roth A, Hahn D, Köstler H. Optimized density-weighted imaging for dynamic contrast-enhanced 3D-MR mammography. J Magn Reson Imaging 2011; 33:328-39. [PMID: 21274974 DOI: 10.1002/jmri.22443] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
PURPOSE To increase the spatial coverage and to reduce slice crosstalk combined with an optimal signal-to-noise ratio (SNR) in 3D dynamic contrast-enhanced (DCE) magnetic resonance (MR) mammography. MATERIALS AND METHODS Asymmetric sampling schemes and a new reconstruction strategy based on virtual coils are presented for density-weighted (DW) 3D imaging. Additionally, for MR mammography an alternating DW (ADW) sampling along the k(y) direction shifts the undersampling artifacts out of the signal reception region. Virtual coils for effective DW (VIDED) imaging suppresses the aliasing in undersampled DW imaging. VIDED and ADW were compared to the conventional Cartesian imaging in phantom and in vivo MR mammography studies. RESULTS The slice crosstalk was significantly reduced by VIDED and compared to Cartesian imaging the SNR increased by 16%. Additionally, VIDED and ADW provided a substantially increased field of view (FOV) in the slice direction and allowed the spatial resolution to be improved (up to 60% for ADW and 30% for VIDED) without lengthening the scan time. CONCLUSION VIDED and ADW improve the image quality in 3D DCE MR mammography by enhancing the spatial resolution, reducing the slice crosstalk at nearly optimal SNR, and increasing the FOV in the slice direction. For VIDED no lengthening of the scan time or usage of multichannel receiver coils is necessary.
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Affiliation(s)
- Marcel Gutberlet
- Institut für Radiologie, Medizinische Hochschule Hannover, Hannover, Germany.
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126
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Schneider JE, Lanz T, Barnes H, Stork LA, Bohl S, Lygate CA, Ordidge RJ, Neubauer S. Accelerated cardiac magnetic resonance imaging in the mouse using an eight-channel array at 9.4 Tesla. Magn Reson Med 2011; 65:60-70. [PMID: 20740650 PMCID: PMC3021721 DOI: 10.1002/mrm.22605] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
MRI has become an important tool to noninvasively assess global and regional cardiac function, infarct size, or myocardial blood flow in surgically or genetically modified mouse models of human heart disease. Constraints on scan time due to sensitivity to general anesthesia in hemodynamically compromised mice frequently limit the number of parameters available in one imaging session. Parallel imaging techniques to reduce acquisition times require coil arrays, which are technically challenging to design at ultrahigh magnetic field strengths. This work validates the use of an eight-channel volume phased-array coil for cardiac MRI in mice at 9.4 T. Two- and three-dimensional sequences were combined with parallel imaging techniques and used to quantify global cardiac function, T(1)-relaxation times and infarct sizes. Furthermore, the rapid acquisition of functional cine-data allowed for the first time in mice measurement of left-ventricular peak filling and ejection rates under intravenous infusion of dobutamine. The results demonstrate that a threefold accelerated data acquisition is generally feasible without compromising the accuracy of the results. This strategy may eventually pave the way for routine, multiparametric phenotyping of mouse hearts in vivo within one imaging session of tolerable duration.
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Affiliation(s)
- Jürgen E Schneider
- British Heart Foundation Experimental MR Unit (BMRU), Department of Cardiovascular Medicine, University of Oxford, Oxford OX3 7BN, United Kingdom.
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127
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Petzschner FH, Ponce IP, Blaimer M, Jakob PM, Breuer FA. Fast MR parameter mapping using k-t principal component analysis. Magn Reson Med 2011; 66:706-16. [PMID: 21394772 DOI: 10.1002/mrm.22826] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2010] [Revised: 12/17/2010] [Accepted: 01/03/2011] [Indexed: 11/09/2022]
Abstract
Quantification of magnetic resonance parameters plays an increasingly important role in clinical applications, such as the detection and classification of neurodegenerative diseases. The major obstacle that remains for its widespread use in clinical routine is the long scanning times. Therefore, strategies that allow for significant decreases in scan time are highly desired. Recently, the k-t principal component analysis method was introduced for dynamic cardiac imaging to accelerate data acquisition. This is done by undersampling k-t space and constraining the reconstruction of the aliased data based on the k-t Broad-use Linear Acquisition Speed-up Technique (BLAST) concept and predetermined temporal basis functions. The objective of this study was to investigate whether the k-t principal component analysis concept can be adapted to parameter quantification, specifically allowing for significant acceleration of an inversion recovery fast imaging with steady state precession (TrueFISP) acquisition. We found that three basis functions and a single training data line in central k-space were sufficient to achieve up to an 8-fold acceleration of the quantification measurement. This allows for an estimation of relaxation times T(1) and T(2) and spin density in one slice with sub-millimeter in-plane resolution, in only 6 s. Our findings demonstrate that the k-t principal component analysis method is a potential candidate to bring the acquisition time for magnetic resonance parameter mapping to a clinically acceptable level.
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Affiliation(s)
- Frederike H Petzschner
- Neurological Research Center, Klinikum Grosshadern, Ludwig-Maximilians University Munich, Munich, Germany.
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128
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Blaimer M, Ponce IP, Breuer FA, Jakob PM, Griswold MA, Kellman P. Temporal filtering effects in dynamic parallel MRI. Magn Reson Med 2011; 66:192-8. [PMID: 21695723 DOI: 10.1002/mrm.22795] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2010] [Revised: 11/29/2010] [Accepted: 12/06/2010] [Indexed: 11/08/2022]
Abstract
Autocalibrated parallel MRI methods such as TSENSE or k-t SENSE have been presented for dynamic imaging studies as they are able to provide images with high temporal resolution. One key element of these techniques is the temporal averaging of the undersampled raw data to obtain an unaliased image. This image represents the temporal average (also known as direct current, DC) and is used to derive the reconstruction parameters. In this work, we show that aliasing artifacts can be introduced in the DC signal obtained from the undersampled raw data. These artifacts lead to undesired temporal filtering effects when the DC signal is used for coil sensitivity calibration or when the DC signal is subtracted from the raw data. It is demonstrated that the temporal filtering effects can be reduced significantly by filtering the DC signal.
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Affiliation(s)
- Martin Blaimer
- Department of Diagnostic Imaging, Research Center Magnetic Resonance Bavaria (MRB), Würzburg, Germany.
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129
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Otazo R, Kim D, Axel L, Sodickson DK. Combination of compressed sensing and parallel imaging for highly accelerated first-pass cardiac perfusion MRI. Magn Reson Med 2011; 64:767-76. [PMID: 20535813 DOI: 10.1002/mrm.22463] [Citation(s) in RCA: 356] [Impact Index Per Article: 27.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
First-pass cardiac perfusion MRI is a natural candidate for compressed sensing acceleration since its representation in the combined temporal Fourier and spatial domain is sparse and the required incoherence can be effectively accomplished by k-t random undersampling. However, the required number of samples in practice (three to five times the number of sparse coefficients) limits the acceleration for compressed sensing alone. Parallel imaging may also be used to accelerate cardiac perfusion MRI, with acceleration factors ultimately limited by noise amplification. In this work, compressed sensing and parallel imaging are combined by merging the k-t SPARSE technique with sensitivity encoding (SENSE) reconstruction to substantially increase the acceleration rate for perfusion imaging. We also present a new theoretical framework for understanding the combination of k-t SPARSE with SENSE based on distributed compressed sensing theory. This framework, which identifies parallel imaging as a distributed multisensor implementation of compressed sensing, enables an estimate of feasible acceleration for the combined approach. We demonstrate feasibility of 8-fold acceleration in vivo with whole-heart coverage and high spatial and temporal resolution using standard coil arrays. The method is relatively insensitive to respiratory motion artifacts and presents similar temporal fidelity and image quality when compared to Generalized autocalibrating partially parallel acquisitions (GRAPPA) with 2-fold acceleration.
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Affiliation(s)
- Ricardo Otazo
- Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, New York, USA.
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130
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Ding Y, Chung YC, Jekic M, Simonetti OP. A new approach to autocalibrated dynamic parallel imaging based on the Karhunen-Loeve transform: KL-TSENSE and KL-TGRAPPA. Magn Reson Med 2011; 65:1786-92. [PMID: 21254210 DOI: 10.1002/mrm.22766] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2010] [Revised: 10/27/2010] [Accepted: 11/24/2010] [Indexed: 11/10/2022]
Abstract
TSENSE and TGRAPPA are autocalibrated parallel imaging techniques that can improve the temporal resolution and/or spatial resolution in dynamic magnetic resonance imaging applications. In its original form, TSENSE uses temporal low-pass filtering of the undersampled frames to create the sensitivity map. TGRAPPA uses a sliding-window moving average when finding the autocalibrating signals. Both filtering methods are suboptimal in the least-squares sense and may give rise to mismatches between the undersampled k-space raw data and the corresponding coil sensitivities. Such mismatches may result in aliasing artifacts when imaging patients with heavy breathing, as in real-time imaging of wall motion by MRI following a treadmill exercise stress test. In this study, we demonstrate the use of an optimal linear filter, i.e., the Karhunen-Loeve transform filter, to estimate the channel sensitivity for TSENSE and acquire the autocalibration signals for TGRAPPA. Phantom experiments show that the new reconstruction method has comparable signal-to-noise ratio performance to traditional TSENSE/TGRAPPA reconstruction. In vivo real-time cardiac cine experiments performed in five healthy volunteers post-exercise during rapid respiration show that the new method significantly reduces the chest wall aliasing artifacts caused by respiratory motion (P < 0.001).
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Affiliation(s)
- Yu Ding
- Davis Heart and Lung Research Institute, The Ohio State University, Columbus, Ohio 43210, USA.
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131
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Peng HH, Bauer S, Huang TY, Chung HW, Hennig J, Jung B, Markl M. Optimized parallel imaging for dynamic PC-MRI with multidirectional velocity encoding. Magn Reson Med 2011; 64:472-80. [PMID: 20665791 DOI: 10.1002/mrm.22432] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Phase contrast MRI with multidirectional velocity encoding requires multiple acquisitions of the same k-space lines to encode the underlying velocities, which can considerably lengthen the total scan time. To reduce scan time, parallel imaging is often applied. In dynamic phase contrast MRI using standard generalized autocalibrating partially parallel acquisitions (GRAPPA), several central k-spaces for autocalibration of the reconstruction (autocalibrating signal lines (ACS)) are typically acquired, separately for each velocity direction and each cardiac timeframe, for calculating the reconstruction weights. To further accelerate data acquisition, we developed two methods, which calculated weights with a substantially reduced number of ACSl lines. The effects on image quality and flow quantification were compared to fully sampled data, standard GRAPPA, and time-interleaved sampling scheme in combination with generalized autocalibrating partially parallel acquisitions (TGRAPPA). The results show that the two proposed methods can clearly improve scan efficiency while maintaining image quality and accuracy of measured flow or myocardial tissue velocities. Compared to TGRAPPA, the proposed methods were more accurate in evaluating flow velocity. In conclusion, the proposed reconstruction strategies are promising for dynamic multidirectionally encoded acquisitions and can easily be implemented using the standard GRAPPA reconstruction algorithm.
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Affiliation(s)
- Hsu-Hsia Peng
- Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, Hsinchu, Taiwan
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132
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Hamilton LH, Fabregat JA, Moratal D, Ramamurthy S, Lerakis S, Parks WJ, Sallee D, Brummer ME. “PINOT”: Time-resolved parallel magnetic resonance imaging with a reduced dynamic field of view. Magn Reson Med 2010; 65:1062-74. [DOI: 10.1002/mrm.22696] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2009] [Revised: 08/06/2010] [Accepted: 09/28/2010] [Indexed: 11/08/2022]
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133
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Saybasili H, Faranesh AZ, Saikus CE, Ozturk C, Lederman RJ, Guttman MA. Interventional MRI using multiple 3D angiography roadmaps with real-time imaging. J Magn Reson Imaging 2010; 31:1015-9. [PMID: 20373448 DOI: 10.1002/jmri.22097] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
PURPOSE To enhance real-time magnetic resonance (MR)-guided catheter navigation by overlaying colorized multiphase MR angiography (MRA) and cholangiopancreatography (MRCP) roadmaps in an anatomic context. MATERIALS AND METHODS Time-resolved MRA and respiratory-gated MRCP were acquired prior to real-time imaging in a pig model. MRA and MRCP data were loaded into a custom real-time MRI reconstruction and visualization workstation where they were displayed as maximum intensity projections (MIPs) in distinct colors. The MIPs were rendered in 3D together with real-time multislice imaging data using alpha blending. Interactive rotation allowed different views of the combined data. RESULTS Fused display of the previously acquired MIP angiography data with real-time imaging added anatomical context during endovascular interventions in swine. The use of multiple MIPs rendered in different colors facilitated differentiation of vascular structures, improving visual feedback during device navigation. CONCLUSION Interventional real-time MRI may be enhanced by combining with previously acquired multiphase angiograms. Rendered as 3D MIPs together with 2D slice data, this technique provided useful anatomical context that enhanced MRI-guided interventional applications.
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Affiliation(s)
- Haris Saybasili
- Translational Medicine Branch, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, Maryland 20892-1061, USA.
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134
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Stäb D, Ritter CO, Breuer FA, Weng AM, Hahn D, Köstler H. CAIPIRINHA accelerated SSFP imaging. Magn Reson Med 2010; 65:157-64. [PMID: 20872868 DOI: 10.1002/mrm.22600] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Daniel Stäb
- Institute of Radiology, University of Würzburg, Würzburg, Germany.
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135
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Seiberlich N, Ehses P, Duerk J, Gilkeson R, Griswold M. Improved radial GRAPPA calibration for real-time free-breathing cardiac imaging. Magn Reson Med 2010; 65:492-505. [PMID: 20872865 DOI: 10.1002/mrm.22618] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2010] [Revised: 07/21/2010] [Accepted: 07/03/2010] [Indexed: 11/07/2022]
Abstract
To generate real-time, nongated, free-breathing cardiac images, the undersampled radial trajectory combined with parallel imaging in the form of radial GRAPPA has shown promise. However, this method starts to fail at high undersampling factors due to the assumptions that must be made for the purposes of calibrating the GRAPPA weight sets. In this manuscript, a novel through-time radial GRAPPA calibration scheme is proposed which greatly improves image quality for the high acceleration factors required for real-time cardiac imaging. This through-time calibration method offers better image quality than standard radial GRAPPA, but it requires many additional calibration frames to be acquired. By combining the through-time calibration method proposed here with the standard through-k-space radial GRAPPA calibration method, images with high acceleration factors can be reconstructed using few calibration frames. Both the through-time and the hybrid through-time/through-k-space methods are investigated to determine the most advantageous calibration parameters for an R = 6 in vivo short-axis cardiac image. Once the calibration parameters have been established, they are then used to reconstruct several in vivo real-time, free-breathing cardiac datasets with temporal resolutions better than 45 msec, including one with a temporal resolution of 35 msec and an in-plane resolution of 1.56 mm(2) .
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Affiliation(s)
- Nicole Seiberlich
- Department of Radiology, University Hospitals of Cleveland, Cleveland, USA.
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136
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Ratering D, Baltes C, Dörries C, Rudin M. Accelerated cardiovascular magnetic resonance of the mouse heart using self-gated parallel imaging strategies does not compromise accuracy of structural and functional measures. J Cardiovasc Magn Reson 2010; 12:43. [PMID: 20663156 PMCID: PMC2918602 DOI: 10.1186/1532-429x-12-43] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2010] [Accepted: 07/21/2010] [Indexed: 11/23/2022] Open
Abstract
BACKGROUND Self-gated dynamic cardiovascular magnetic resonance (CMR) enables non-invasive visualization of the heart and accurate assessment of cardiac function in mouse models of human disease. However, self-gated CMR requires the acquisition of large datasets to ensure accurate and artifact-free reconstruction of cardiac cines and is therefore hampered by long acquisition times putting high demands on the physiological stability of the animal. For this reason, we evaluated the feasibility of accelerating the data collection using the parallel imaging technique SENSE with respect to both anatomical definition and cardiac function quantification. RESULTS Findings obtained from accelerated data sets were compared to fully sampled reference data. Our results revealed only minor differences in image quality of short- and long-axis cardiac cines: small anatomical structures (papillary muscles and the aortic valve) and left-ventricular (LV) remodeling after myocardial infarction (MI) were accurately detected even for 3-fold accelerated data acquisition using a four-element phased array coil. Quantitative analysis of LV cardiac function (end-diastolic volume (EDV), end-systolic volume (ESV), stroke volume (SV), ejection fraction (EF) and LV mass) in healthy and infarcted animals revealed no substantial deviations from reference (fully sampled) data for all investigated acceleration factors with deviations ranging from 2% to 6% in healthy animals and from 2% to 8% in infarcted mice for the highest acceleration factor of 3.0. CNR calculations performed between LV myocardial wall and LV cavity revealed a maximum CNR decrease of 50% for the 3-fold accelerated data acquisition when compared to the fully-sampled acquisition. CONCLUSIONS We have demonstrated the feasibility of accelerated self-gated retrospective CMR in mice using the parallel imaging technique SENSE. The proposed method led to considerably reduced acquisition times, while preserving high spatial resolution at sufficiently high CNR. The accuracy of measurements of both structural and functional parameters of the mouse heart was not compromised by the application of the proposed accelerated data acquisition method.
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Affiliation(s)
- David Ratering
- Institute for Biomedical Engineering, University and ETH Zurich, Wolfgang-Pauli-Strasse 10, Zurich, 8093, Switzerland
| | - Christof Baltes
- Institute for Biomedical Engineering, University and ETH Zurich, Wolfgang-Pauli-Strasse 10, Zurich, 8093, Switzerland
| | - Carola Dörries
- Institute of Physiology and Zurich Center for Integrative Human Physiology (ZIHP), University Zurich and Cardiology University Hospital Zurich, Winterthurerstrasse 190, Zürich, 8057, Switzerland
| | - Markus Rudin
- Institute for Biomedical Engineering, University and ETH Zurich, Wolfgang-Pauli-Strasse 10, Zurich, 8093, Switzerland
- Institute of Pharmacology & Toxicology, University Zurich, Winterthurerstrasse 190, Zurich, 8057, Switzerland
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137
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Ramirez MS, Esparza-Coss E, Bankson JA. Multiple-mouse MRI with multiple arrays of receive coils. Magn Reson Med 2010; 63:803-10. [PMID: 20146352 DOI: 10.1002/mrm.22236] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Compared to traditional single-animal imaging methods, multiple-mouse MRI has been shown to dramatically improve imaging throughput and reduce the potentially prohibitive cost for instrument access. To date, up to a single radiofrequency coil has been dedicated to each animal being simultaneously scanned, thus limiting the sensitivity, flexibility, and ultimate throughput. The purpose of this study was to investigate the feasibility of multiple-mouse MRI with a phased-array coil dedicated to each animal. A dual-mouse imaging system, consisting of a pair of two-element phased-array coils, was developed and used to achieve acceleration factors greater than the number of animals scanned at once. By simultaneously scanning two mice with a retrospectively gated cardiac cine MRI sequence, a 3-fold acceleration was achieved with signal-to-noise ratio in the heart that is equivalent to that achieved with an unaccelerated scan using a commercial mouse birdcage coil.
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Affiliation(s)
- Marc S Ramirez
- Department of Imaging Physics, The University of Texas M D Anderson Cancer Center, Houston, Texas 77030-4009, USA
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138
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Single breath-hold magnetic resonance cine imaging for fast assessment of global and regional left ventricular function in clinical routine. Eur Radiol 2010; 20:2341-7. [DOI: 10.1007/s00330-010-1827-2] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2010] [Revised: 04/08/2010] [Accepted: 05/06/2010] [Indexed: 10/19/2022]
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139
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Chao TC, Chung HW, Hoge WS, Madore B. A 2D MTF approach to evaluate and guide dynamic imaging developments. Magn Reson Med 2010; 63:407-18. [PMID: 19877276 DOI: 10.1002/mrm.22219] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
As the number and complexity of partially sampled dynamic imaging methods continue to increase, reliable strategies to evaluate performance may prove most useful. In the present work, an analytical framework to evaluate given reconstruction methods is presented. A perturbation algorithm allows the proposed evaluation scheme to perform robustly without requiring knowledge about the inner workings of the method being evaluated. A main output of the evaluation process consists of a two-dimensional modulation transfer function, an easy-to-interpret visual rendering of a method's ability to capture all combinations of spatial and temporal frequencies. Approaches to evaluate noise properties and artifact content at all spatial and temporal frequencies are also proposed. One fully sampled phantom and three fully sampled cardiac cine datasets were subsampled (R = 4 and 8) and reconstructed with the different methods tested here. A hybrid method, which combines the main advantageous features observed in our assessments, was proposed and tested in a cardiac cine application, with acceleration factors of 3.5 and 6.3 (skip factors of 4 and 8, respectively). This approach combines features from methods such as k-t sensitivity encoding, unaliasing by Fourier encoding the overlaps in the temporal dimension-sensitivity encoding, generalized autocalibrating partially parallel acquisition, sensitivity profiles from an array of coils for encoding and reconstruction in parallel, self, hybrid referencing with unaliasing by Fourier encoding the overlaps in the temporal dimension and generalized autocalibrating partially parallel acquisition, and generalized autocalibrating partially parallel acquisition-enhanced sensitivity maps for sensitivity encoding reconstructions.
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Affiliation(s)
- Tzu-Cheng Chao
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA.
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140
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Kellman P, Chefd'hotel C, Lorenz CH, Mancini C, Arai AE, McVeigh ER. High spatial and temporal resolution cardiac cine MRI from retrospective reconstruction of data acquired in real time using motion correction and resorting. Magn Reson Med 2010; 62:1557-64. [PMID: 19780155 DOI: 10.1002/mrm.22153] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Cine MRI is used for assessing cardiac function and flow and is typically based on a breath-held, segmented data acquisition. Breath holding is particularly difficult for patients with congestive heart failure or in pediatric cases. Real-time imaging may be used without breath holding or ECG triggering. However, despite the use of rapid imaging sequences and accelerated parallel imaging, real-time imaging typically has compromised spatial and temporal resolution compared with gated, segmented breath-held studies. A new method is proposed that produces a cardiac cine across the full cycle, with both high spatial and temporal resolution from a retrospective reconstruction of data acquired over multiple heartbeats during free breathing. The proposed method was compared with conventional cine images in 10 subjects. The resultant image quality for the proposed method (4.2 +/- 0.4) without breath holding or gating was comparable to the conventional cine (4.4 +/- 0.5) on a five-point scale (P = n.s.). Motion-corrected averaging of real-time acquired cardiac images provides a means of attaining high-quality cine images with many of the benefits of real-time imaging, such as free-breathing acquisition and tolerance to arrhythmias.
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Affiliation(s)
- Peter Kellman
- Laboratory of Cardiac Energetics, National Heart, Lung and Blood Institute, National Institutes of Health, DHHS, Bethesda, Maryland 20892-1061, USA.
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141
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Davarpanah AH, Chen YP, Kino A, Farrelly CT, Keeling AN, Sheehan JJ, Ragin AB, Weale PJ, Zuehlsdorff S, Carr JC. Accelerated two- and three-dimensional cine MR imaging of the heart by using a 32-channel coil. Radiology 2009; 254:98-108. [PMID: 20019138 DOI: 10.1148/radiol.2541090545] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
PURPOSE To compare accelerated real-time two-dimensional (2D) and segmented three-dimensional (3D) cine steady-state free precession magnetic resonance (MR) imaging techniques by using a 32-channel coil with a conventional 2D cine imaging approach for imaging the heart and to evaluate any difference caused by free breathing and breath holding for real-time imaging. MATERIALS AND METHODS In this institutional review board-approved HIPAA-compliant study, 10 healthy volunteers and 22 consecutive patients who were suspected of having or were known to have heart disease underwent cardiac MR imaging by using a 32-channel coil. A conventional multisection 2D real-time cine sequence was used as the reference standard, and three additional accelerated cine sequences were implemented. Volumetric parameters, including ejection fraction (EF), end-diastolic volume (EDV), end-systolic volume (ESV), stroke volume(SV), and myocardial mass, were derived. Wall motion and image quality were assessed by two radiologists. In addition, image time was registered. An additional set of images was acquired by using real-time sequences with free breathing, and quantitative measurements were compared with measurements on images obtained with breath holding. For quantitative analysis, repeated-measures analysis of variance, paired t test, and Bland-Altman analysis were used; for qualitative analysis, nonparametric Wilcoxon signed-rank test was used. RESULTS All volumetric measurements were significantly correlated with those of the standard sequence (r > 0.80, P < .01). No significant difference among protocols was observed in terms of mean levels for EF or ESV (P > .05). However, a significant difference was indicated for EDV and SV (P < .01).The accelerated protocols had significantly shorter image times (P < .001). Wall motion scores were concordant with the standard sequence in 43-44 (93%-96%) segments for the accelerated protocols, with a strong interreader agreement (intraclass correlation coefficient, > or =0.93). No significant difference was identified between real-time protocols with free breathing and those with breath holding for measurement of volumetric parameters. CONCLUSION Accelerated real-time 2D and segmented 3D cine techniques are comparable to the standard clinical protocol in assessment of left ventricular global and regional parameters in substantially shorter image times.
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Affiliation(s)
- Amir H Davarpanah
- Department of Radiology, Northwestern University, Feinberg School of Medicine, 737 N Michigan Ave, Suite 1600, Chicago, IL 60611, USA.
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142
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Lin FH, Witzel T, Chang WT, Wen-Kai Tsai K, Wang YH, Kuo WJ, Belliveau JW. K-space reconstruction of magnetic resonance inverse imaging (K-InI) of human visuomotor systems. Neuroimage 2009; 49:3086-98. [PMID: 19914383 DOI: 10.1016/j.neuroimage.2009.11.016] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2009] [Revised: 08/13/2009] [Accepted: 11/09/2009] [Indexed: 10/20/2022] Open
Abstract
Using simultaneous measurements from multiple channels of a radio-frequency coil array, magnetic resonance inverse imaging (InI) can achieve ultra-fast dynamic functional imaging of the human with whole-brain coverage and a good spatial resolution. Mathematically, the InI reconstruction is a generalization of parallel MRI (pMRI), which includes image space and k-space reconstructions. Because of the auto-calibration technique, the pMRI k-space reconstruction offers more robust and adaptive reconstructions compared to the image space algorithm. Here we present the k-space InI (K-InI) reconstructions to reconstruct the highly accelerated BOLD-contrast fMRI data of the human brain to achieve 100 ms temporal resolution. Simulations show that K-InI reconstructions can offer 3D image reconstructions at each time frame with reasonable spatial resolution, which cannot be obtained using the previously proposed image space minimum-norm estimates (MNE) or linear constraint minimum variance (LCMV) spatial filtering reconstructions. The InI reconstructions of in vivo BOLD-contrast fMRI data during a visuomotor task show that K-InI offer 3 to 5 fold more sensitive detection of the brain activation than MNE and a comparable detection sensitivity to the LCMV reconstructions. The group average of the high temporal resolution K-InI reconstructions of the hemodynamic response also shows a relative onset timing difference between the visual (first) and somatomotor (second) cortices by 400 ms (600 ms time-to-peak timing difference). This robust and sensitive K-InI reconstruction can be applied to dynamic MRI acquisitions using a large-n coil array to improve the spatiotemporal resolution.
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Affiliation(s)
- Fa-Hsuan Lin
- Institute of Biomedical Engineering, National Taiwan University, Taipei, Taiwan
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143
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Time-resolved 3D pulmonary perfusion MRI: comparison of different k-space acquisition strategies at 1.5 and 3 T. Invest Radiol 2009; 44:525-31. [PMID: 19652608 DOI: 10.1097/rli.0b013e3181b4c252] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
PURPOSE Time-resolved pulmonary perfusion MRI requires both high temporal and spatial resolution, which can be achieved by using several nonconventional k-space acquisition techniques. The aim of this study is to compare the image quality of time-resolved 3D pulmonary perfusion MRI with different k-space acquisition techniques in healthy volunteers at 1.5 and 3 T. METHODS Ten healthy volunteers underwent contrast-enhanced time-resolved 3D pulmonary MRI on 1.5 and 3 T using the following k-space acquisition techniques: (a) generalized autocalibrating partial parallel acquisition (GRAPPA) with an internal acquisition of reference lines (IRS), (b) GRAPPA with a single "external" acquisition of reference lines (ERS) before the measurement, and (c) a combination of GRAPPA with an internal acquisition of reference lines and view sharing (VS). The spatial resolution was kept constant at both field strengths to exclusively evaluate the influences of the temporal resolution achieved with the different k-space sampling techniques on image quality. The temporal resolutions were 2.11 seconds IRS, 1.31 seconds ERS, and 1.07 VS at 1.5 T and 2.04 seconds IRS, 1.30 seconds ERS, and 1.19 seconds VS at 3 T.Image quality was rated by 2 independent radiologists with regard to signal intensity, perfusion homogeneity, artifacts (eg, wrap around, noise), and visualization of pulmonary vessels using a 3 point scale (1 = nondiagnostic, 2 = moderate, 3 = good). Furthermore, the signal-to-noise ratio in the lungs was assessed. RESULTS At 1.5 T the lowest image quality (sum score: 154) was observed for the ERS technique and the highest quality for the VS technique (sum score: 201). In contrast, at 3 T images acquired with VS were hampered by strong artifacts and image quality was rated significantly inferior (sum score: 137) compared with IRS (sum score: 180) and ERS (sum score: 174). Comparing 1.5 and 3 T, in particular the overall rating of the IRS technique (sum score: 180) was very similar at both field strengths. At 1.5 T the peak signal-to-noise ratio of the ERS was significantly lower in comparison to the IRS and the VS technique (14.6 vs. 26.7 and 39.6 respectively, P < 0.004). CONCLUSION Using the IRS sampling algorithm comparable image quality and SNR can be achieved at 1.5 and 3 T. At 1.5 T VS offers the best possible solution for the conflicting requirements between a further increased temporal resolution and image quality. In consequence the gain of increased scanning efficiency from advanced k[r]-space sampling acquisition techniques can be exploited for a further improvement of image quality of pulmonary perfusion MRI.
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144
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Chen Z, Zhang J, Yang R, Kellman P, Johnston LA, Egan GF. IIR GRAPPA for parallel MR image reconstruction. Magn Reson Med 2009; 63:502-9. [PMID: 19859951 DOI: 10.1002/mrm.22197] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Zhaolin Chen
- Howard Florey Institute, Florey Neuroscience Institutes, Victoria, Australia.
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145
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Honal M, Bauer S, Ludwig U, Leupold J. Increasing efficiency of parallel imaging for 2D multislice acquisitions. Magn Reson Med 2009; 61:1459-70. [PMID: 19365856 DOI: 10.1002/mrm.21818] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Parallel imaging algorithms require precise knowledge about the spatial sensitivity variation of the receiver coils to reconstruct images with full field of view (FOV) from undersampled Fourier encoded data. Sensitivity information must either be given a priori, or estimated from calibration data acquired along with the actual image data. In this study, two approaches are presented, which require very little or no additional data at all for calibration in two-dimensional multislice acquisitions. Instead of additional data, information from spatially adjacent slices is used to estimate coil sensitivity information, thereby increasing the efficiency of parallel imaging. The proposed approaches rely on the assumption that over a small range of slices, coil sensitivities vary smoothly in slice direction. Both methods are implemented as variants of the GRAPPA algorithm. For a given effective acceleration, superior image quality is achieved compared to the conventional GRAPPA method. For the latter calibration lines for coil weight computation must be acquired in addition to the undersampled k-spaces for coil weight computation, thus requiring higher k-space undersampling, that is, a higher reduction factor to achieve the same effective acceleration. The proposed methods are particularly suitable to speed up parallel imaging for clinical applications where the reduction factor is limited to two or three.
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Affiliation(s)
- Matthias Honal
- University Hospital Freiburg, Department of Diagnostic Radiology, Medical Physics Freiburg, Germany.
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146
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Rapid MR assessment of left ventricular systolic function after acute myocardial infarction using single breath-hold cine imaging with the temporal parallel acquisition technique (TPAT) and 4D guide-point modelling analysis of left ventricular function. Eur Radiol 2009; 20:73-80. [DOI: 10.1007/s00330-009-1522-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2009] [Revised: 06/02/2009] [Accepted: 06/22/2009] [Indexed: 11/25/2022]
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147
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Data consistency criterion for selecting parameters for k-space-based reconstruction in parallel imaging. Magn Reson Imaging 2009; 28:119-28. [PMID: 19570636 DOI: 10.1016/j.mri.2009.05.047] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2009] [Accepted: 05/20/2009] [Indexed: 11/20/2022]
Abstract
k-space-based reconstruction in parallel imaging depends on the reconstruction kernel setting, including its support. An optimal choice of the kernel depends on the calibration data, coil geometry and signal-to-noise ratio, as well as the criterion used. In this work, data consistency, imposed by the shift invariance requirement of the kernel, is introduced as a goodness measure of k-space-based reconstruction in parallel imaging and demonstrated. Data consistency error (DCE) is calculated as the sum of squared difference between the acquired signals and their estimates obtained based on the interpolation of the estimated missing data. A resemblance between DCE and the mean square error in the reconstructed image was found, demonstrating DCE's potential as a metric for comparing or choosing reconstructions. When used for selecting the kernel support for generalized autocalibrating partially parallel acquisition (GRAPPA) reconstruction and the set of frames for calibration as well as the kernel support in temporal GRAPPA reconstruction, DCE led to improved images over existing methods. Data consistency error is efficient to evaluate, robust for selecting reconstruction parameters and suitable for characterizing and optimizing k-space-based reconstruction in parallel imaging.
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148
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Heilmaier C, Nassenstein K, Nielles-Vallespin S, Zuehlsdorff S, Hunold P, Barkhausen J. Assessment of left ventricular function with single breath-hold highly accelerated cine MRI combined with guide-point modeling. Eur J Radiol 2009; 74:492-9. [PMID: 19394783 DOI: 10.1016/j.ejrad.2009.03.028] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2008] [Revised: 03/10/2009] [Accepted: 03/12/2009] [Indexed: 10/20/2022]
Abstract
PURPOSE To prospectively assess the performance of highly accelerated cine MRI in multi-orientations combined with a new guide-point modeling post-processing technique (GPM approach) for assessment of left ventricular (LV) function compared to the standard summation of slices method based on a stack of short axis views (SoS approach). MATERIALS AND METHODS 33 consecutive patients were examined on a 1.5T scanner with a standard steady state free precession (SSFP) sequence (TR, 3.0 ms; TE, 1.5m; flip angle (FA), 60 degrees ; acceleration factor (AF), 2) analyzed with the SoS method and a highly accelerated, single breath-hold temporal parallel acquisition SSFP sequence (TR, 4.6 ms; TE, 1.1 ms; AF, 3) post-processed with the GPM method. LV function values were measured by two independent readers with different experience in cardiac MRI and compared by using the paired t-test and F-test. Inter- and intraobserver agreements were calculated using Bland-Altman-Plots. RESULTS Mean acquisition and post-processing time was significantly shorter with the GPM approach (15s/3 min versus 360 s/6 min). For all LV function parameters interobserver agreement between the experienced and non-experienced reader was significantly improved when the GPM approach was used. However, end-diastolic and end-systolic volumes were larger for the GPM technique when compared to the SoS method (P<0.001), whereas ejection fraction estimation yielded equivalent results (P>0.121). In both readers and for all parameters variances did not differ significantly (P>or=0.409) and the two approaches showed an excellent linear correlation (r>0.951). CONCLUSION Due to its accurate, fast and reproducible assessment of LV function parameters highly accelerated MRI combined with the GPM technique may become the technique of first choice for assessment of LV function in clinical routine.
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Affiliation(s)
- Christina Heilmaier
- Department of Diagnostic and Interventional Radiology and Neuroradiology, University Hospital Essen, Germany.
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149
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Saybasili H, Kellman P, Griswold MA, Derbyshire JA, Guttman MA. HTGRAPPA: Real-time B
1
-weighted image domain TGRAPPA reconstruction. Magn Reson Med 2009; 61:1425-33. [DOI: 10.1002/mrm.21922] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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150
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Carotid intima-media thickness and distensibility measured by MRI at 3 T versus high-resolution ultrasound. Eur Radiol 2009; 19:1470-9. [PMID: 19214524 DOI: 10.1007/s00330-009-1295-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2008] [Revised: 10/23/2008] [Accepted: 11/28/2008] [Indexed: 10/21/2022]
Abstract
We evaluated an MRI protocol at 3 T for the assessment of morphological and functional properties of the common carotid artery (CCA) in 32 healthy volunteers and 20 patients with high-grade internal carotid artery stenosis. Wall thickness of the CCA was measured by using multislice 2D T2 dark blood fast spin echo sequences and compared with intima-media thickness (IMT) determined by ultrasound. Carotid distensibility coefficient (DC) quantified by blood pressure and CCA diameter change during the cardiac cycle was measured by ECG gated 3D T1 CINE MRI and M-mode ultrasound. Apart from generally higher values in MRI high agreement was found for wall thickness and compliance in volunteers and patients. Remaining differences between both methods may be attributed to slightly different methods for measuring IMT and DC. Our findings indicate that MRI at 3 T is a feasible and promising tool for the comprehensive assessment of normal carotid geometry and function.
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