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Olszewska-Widdrat A, Schiro G, Reichel VE, Faivre D. Reducing Conditions Favor Magnetosome Production in Magnetospirillum magneticum AMB-1. Front Microbiol 2019; 10:582. [PMID: 30984131 PMCID: PMC6450187 DOI: 10.3389/fmicb.2019.00582] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 03/07/2019] [Indexed: 01/06/2023] Open
Abstract
Magnetotactic bacteria (MTB) are a heterogeneous group of Gram-negative prokaryotes, which all produce special magnetic organelles called magnetosomes. The magnetosome consists of a magnetic nanoparticle, either magnetite (Fe3O4) or greigite (Fe3S4), embedded in a membrane, which renders the systems colloidaly stable, a desirable property for biotechnological applications. Although these bacteria are able to regulate the formation of magnetosomes through a biologically-controlled mechanism, the environment in general and the physico–chemical conditions surrounding the cells in particular also influence biomineralization. This work thus aims at understanding how such external conditions, in particular the extracellular oxidation reduction potential, influence magnetite formation in the strain Magnetospirillum magneticum AMB-1. Controlled cultivation of the microorganisms was performed at different redox potential in a bioreactor and the formation of magnetosomes was assessed by microscopic and spectroscopic techniques. Our results show that the formation of magnetosomes is inhibited at the highest potential tested (0 mV), whereas biomineralization is facilitated under reduced conditions (-500 mV). This result improves the understanding of the biomineralization process in MTB and provides useful information in sight of a large scale production of magnetosomes for different applications.
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Affiliation(s)
| | - Gabriele Schiro
- Max Planck Institute of Colloids and Interfaces, Science Park Golm, Potsdam, Germany
| | - Victoria E Reichel
- Max Planck Institute of Colloids and Interfaces, Science Park Golm, Potsdam, Germany
| | - Damien Faivre
- Max Planck Institute of Colloids and Interfaces, Science Park Golm, Potsdam, Germany.,Aix-Marseille University, CEA, CNRS, BIAM, Saint-Paul-lés-Durance, France
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153
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Effects of Single and Mixed Energy Sources on Intracellular Nanoparticles Synthesized by Acidithiobacillus ferrooxidans. MINERALS 2019. [DOI: 10.3390/min9030163] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Effective biosynthesis of magnetite nanoparticles using current technology is challenging. We investigated the synthesis of nanoparticles by Acidithiobacillus ferrooxidans grown on ferrous iron, elemental sulphur, and mixtures of both substrates. A comparison of tests with different doping amounts of elemental sulphur in ferrous-containing medium showed that the addition of 0.25 and 0.5 M elemental sulphur to the medium resulted in an increased delay of microbial growth and ferrous iron oxidation. TEM suggested that the ferrous material was an essential energy source for the synthesis of nanoparticles in cells. TEM results indicated that the different ratios of ferrous and sulphur had no significant effect on the morphology of bacteria and the size of nanoparticles. High-resolution transmission electron microscopy (HRTEM), energy dispersive X-ray spectroscopy (EDX), and X-ray absorption near edge structure (XANES) showed that the nanoparticles were composed of magnetite. For the first time, HRTEM and XANES spectra in-situ characterization was conducted to investigate the nanoparticles that were synthesized by A. ferrooxidans. The findings from this study indicated that the different ratios of ferrous and sulphur had no significant effect on size and shape of nanoparticles synthesized by A. ferrooxidans.
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154
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Mickoleit F, Schüler D. Generation of nanomagnetic biocomposites by genetic engineering of bacterial magnetosomes. BIOINSPIRED BIOMIMETIC AND NANOBIOMATERIALS 2019. [DOI: 10.1680/jbibn.18.00005] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Frank Mickoleit
- Department of Microbiology, University of Bayreuth, Bayreuth, Germany
| | - Dirk Schüler
- Department of Microbiology, University of Bayreuth, Bayreuth, Germany
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155
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Debus C, Wu B, Kollmann T, Duchstein P, Siglreitmeier M, Herrera S, Benke D, Kisailus D, Schwahn D, Pipich V, Faivre D, Zahn D, Cölfen H. Bioinspired multifunctional layered magnetic hybrid materials. BIOINSPIRED BIOMIMETIC AND NANOBIOMATERIALS 2019. [DOI: 10.1680/jbibn.18.00030] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Christian Debus
- Department of Physical Chemistry, University of Konstanz, Konstanz, Germany
| | - Baohu Wu
- Jülich Centre for Neutron Science, Heinz Maier-Leibnitz Zentrum, Garching, Germany
| | - Tina Kollmann
- Computer Chemistry Centre, University Erlangen–Nuremberg, Erlangen, Germany
| | - Patrick Duchstein
- Computer Chemistry Centre, University Erlangen–Nuremberg, Erlangen, Germany
| | | | - Steven Herrera
- Materials Science and Engineering Program, University of California Riverside, Riverside, CA, USA
| | - Dominik Benke
- Department of Physical Chemistry I, University of Bayreuth, Bayreuth, Germany
| | - David Kisailus
- Department of Chemical and Environmental Engineering and Materials Science and Engineering Program, University of California Riverside, Riverside, CA, USA
| | - Dietmar Schwahn
- Jülich Centre for Neutron Science, Heinz Maier-Leibnitz Zentrum, Garching, Germany; Technische Universität München, Forschungs-Neutronenquelle Heinz Maier-Leibnitz, Garching, Germany
| | - Vitaliy Pipich
- Jülich Centre for Neutron Science, Heinz Maier-Leibnitz Zentrum, Garching, Germany
| | - Damien Faivre
- Biosciences and Biotechnologies Institute, Aix Marseille Universite, CEA and CNRS, Saint-Paul-lès-Durance, France
| | - Dirk Zahn
- Computer Chemistry Centre, University Erlangen–Nuremberg, Erlangen, Germany
| | - Helmut Cölfen
- Department of Physical Chemistry, University of Konstanz, Konstanz, Germany
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156
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Roca AG, Gutiérrez L, Gavilán H, Fortes Brollo ME, Veintemillas-Verdaguer S, Morales MDP. Design strategies for shape-controlled magnetic iron oxide nanoparticles. Adv Drug Deliv Rev 2019; 138:68-104. [PMID: 30553951 DOI: 10.1016/j.addr.2018.12.008] [Citation(s) in RCA: 127] [Impact Index Per Article: 25.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Revised: 11/20/2018] [Accepted: 12/11/2018] [Indexed: 01/01/2023]
Abstract
Ferrimagnetic iron oxide nanoparticles (magnetite or maghemite) have been the subject of an intense research, not only for fundamental research but also for their potentiality in a widespread number of practical applications. Most of these studies were focused on nanoparticles with spherical morphology but recently there is an emerging interest on anisometric nanoparticles. This review is focused on the synthesis routes for the production of uniform anisometric magnetite/maghemite nanoparticles with different morphologies like cubes, rods, disks, flowers and many others, such as hollow spheres, worms, stars or tetrapods. We critically analyzed those procedures, detected the key parameters governing the production of these nanoparticles with particular emphasis in the role of the ligands in the final nanoparticle morphology. The main structural and magnetic features as well as the nanotoxicity as a function of the nanoparticle morphology are also described. Finally, the impact of each morphology on the different biomedical applications (hyperthermia, magnetic resonance imaging and drug delivery) are analysed in detail. We would like to dedicate this work to Professor Carlos J. Serna, Instituto de Ciencia de Materiales de Madrid, ICMM/CSIC, for his outstanding contribution in the field of monodispersed colloids and iron oxide nanoparticles. We would like to express our gratitude for all these years of support and inspiration on the occasion of his retirement.
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Affiliation(s)
- Alejandro G Roca
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain; Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and BIST, Campus UAB, Bellaterra, E-08193 Barcelona, Spain.
| | - Lucía Gutiérrez
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain; Dept. Química Analítica, Instituto de Nanociencia de Aragón, Universidad de Zaragoza and CIBER-BBN, E-50018 Zaragoza, Spain.
| | - Helena Gavilán
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain.
| | - Maria Eugênia Fortes Brollo
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain.
| | - Sabino Veintemillas-Verdaguer
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain.
| | - María Del Puerto Morales
- Dept. Energía, Medio Ambiente y Salud, Instituto de Ciencia de Materiales de Madrid, CSIC, Cantoblanco, E-28049 Madrid, Spain.
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157
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158
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Jencarova J, Luptakova A, Vitkovska N, Matysek D, Jandacka P. Magnetic sorbents biomineralization on the basis of iron sulphides. ENVIRONMENTAL TECHNOLOGY 2018; 39:2916-2925. [PMID: 28818029 DOI: 10.1080/09593330.2017.1369581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Biomineralization means mineral formation under the influence of organisms. Sulphate-reducing bacteria (SRB) constitute an essential role of iron sulphide minerals precipitation. Their composition involves amorphous, non-stoichiometric or crystalline iron sulphides, weakly or strongly magnetic. Variation in environmental conditions can alter the reactive iron species within the mineral, potentially modifying their magnetic properties. Biogenic iron sulphide minerals can be used as heavy metals and toxic ions adsorbents in soil or water remediation. For these reasons, a series of laboratory-scale iron sulphide synthesis experiments with the aim to study the chemical composition, mineralogy and magnetic properties of iron sulphide precipitates were carried out using SRB under various cultivation mode and nutrient medium composition. Energy-dispersive X-ray analysis (EDX) showed formation of iron sulphides in all biogenic samples and iron phosphates in abiotic controls. Results of X-ray diffraction analysis (XRD) in biomineralized samples confirmed nanocrystalline greigite, mackinawite and sulphur alpha. Magnetic measurements showed that sample prepared by static cultivation without addition of fresh nutrient medium was the most magnetic, magnetic hysteresis of sample formed under semicontinuous mode without any nutrient supply was the lowest. Abiotic samples contained only vivianite and they did not prove any significant response to magnetic field.
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Affiliation(s)
- Jana Jencarova
- a Institute of Geotechnics, Slovak Academy of Sciences , Kosice , Slovak Republic
| | - Alena Luptakova
- a Institute of Geotechnics, Slovak Academy of Sciences , Kosice , Slovak Republic
| | - Nikola Vitkovska
- b Institute of Physics, Faculty of Mining and Geology, VSB-Technical University of Ostrava , Ostrava , Czech Republic
| | - Dalibor Matysek
- c Institute of Geological Engineering, Faculty of Mining and Geology, VSB-Technical University of Ostrava , Ostrava , Czech Republic
| | - Petr Jandacka
- b Institute of Physics, Faculty of Mining and Geology, VSB-Technical University of Ostrava , Ostrava , Czech Republic
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159
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Membrane protein engineering to the rescue. Biochem Soc Trans 2018; 46:1541-1549. [PMID: 30381335 DOI: 10.1042/bst20180140] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2018] [Revised: 09/03/2018] [Accepted: 09/05/2018] [Indexed: 02/07/2023]
Abstract
The inherent hydrophobicity of membrane proteins is a major barrier to membrane protein research and understanding. Their low stability and solubility in aqueous environments coupled with poor expression levels make them a challenging area of research. For many years, the only way of working with membrane proteins was to optimise the environment to suit the protein, through the use of different detergents, solubilising additives, and other adaptations. However, with innovative protein engineering methodologies, the membrane proteins themselves are now being adapted to suit the environment. This mini-review looks at the types of adaptations which are applied to membrane proteins from a variety of different fields, including water solubilising fusion tags, thermostabilising mutation screening, scaffold proteins, stabilising protein chimeras, and isolating water-soluble domains.
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160
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Marcuello C, Chambel L, Rodrigues MS, Ferreira LP, Cruz MM. Magnetotactic Bacteria: Magnetism Beyond Magnetosomes. IEEE Trans Nanobioscience 2018; 17:555-559. [PMID: 30371384 DOI: 10.1109/tnb.2018.2878085] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Magnetotactic bacteria are a group of organisms deeply studied in the last years due to their interesting magnetic behavior and potential applications in nanometrology, hyperthermia, and biosensor devices. One intrinsic common characteristic is the presence, inside the bacteria, of magnetic nanoparticles called magnetosomes. The role of magnetosomes as bacterial tools to orient the bacteria and find new habitats is universally accepted, but the way they develop still is not fully understood. A strain of Magnetospirillum magnetotacticum was grown and investigated at the nanoscale using transmission electron microscopy and atomic/magnetic force microscopy techniques. Magnetosomes were observed as well as long filaments with magnetic response that could be associated to the actin-like filaments being crucial to allow the nanoparticles orientation and magnetosomes formation. To the best of our knowledge, this paper is the first to visualize these reproducible long-range size magnetic crystalline structures.
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161
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Le Nagard L, Morillo-López V, Fradin C, Bazylinski DA. Growing Magnetotactic Bacteria of the Genus Magnetospirillum: Strains MSR-1, AMB-1 and MS-1. J Vis Exp 2018. [PMID: 30394392 DOI: 10.3791/58536] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
Abstract
Magnetotactic bacteria are Gram-negative, motile, mainly aquatic prokaryotes ubiquitous in freshwater and marine habitats. They are characterized by their ability to biomineralize magnetosomes, which are magnetic nanometer-sized crystals of magnetite (Fe3O4) or greigite (Fe3S4) surrounded by a lipid bilayer membrane, within their cytoplasm. For most known magnetotactic bacteria, magnetosomes are assembled in chains inside the cytoplasm, thereby conferring a permanent magnetic dipole moment to the cells and causing them to align passively with external magnetic fields. Because of these specific features, magnetotactic bacteria have a great potential for commercial and medical applications. However, most species are microaerophilic and have specific O2 concentration requirements, making them more difficult to grow routinely than many other bacteria such as Escherichia coli. Here we present detailed protocols for growing three of the most widely studied strains of magnetotactic bacteria, all belonging to the genus Magnetospirillum. These methods allow for precise control of the O2 concentration made available to the bacteria, in order to ensure that they grow normally and synthesize magnetosomes. Growing magnetotactic bacteria for further studies using these procedures does not require the experimentalist to be an expert in microbiology. The general methods presented in this article may also be used to isolate and culture other magnetotactic bacteria, although it is likely that growth media chemical composition will need to be modified.
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Affiliation(s)
| | | | - Cecile Fradin
- Department of Physics & Astronomy, McMaster University;
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162
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163
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Chang L, Harrison RJ, Zeng F, Berndt TA, Roberts AP, Heslop D, Zhao X. Coupled microbial bloom and oxygenation decline recorded by magnetofossils during the Palaeocene-Eocene Thermal Maximum. Nat Commun 2018; 9:4007. [PMID: 30275540 PMCID: PMC6167317 DOI: 10.1038/s41467-018-06472-y] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 09/10/2018] [Indexed: 11/09/2022] Open
Abstract
Understanding marine environmental change and associated biological turnover across the Palaeocene–Eocene Thermal Maximum (PETM; ~56 Ma)—the most pronounced Cenozoic short-term global warming event—is important because of the potential role of the ocean in atmospheric CO2 drawdown, yet proxies for tracing marine productivity and oxygenation across the PETM are limited and results remain controversial. Here we show that a high-resolution record of South Atlantic Ocean bottom water oxygenation can be extracted from exceptionally preserved magnetofossils—the bioinorganic magnetite nanocrystals produced by magnetotactic bacteria (MTB) using a new multiscale environmental magnetic approach. Our results suggest that a transient MTB bloom occurred due to increased nutrient supply. Bottom water oxygenation decreased gradually from the onset to the peak PETM. These observations provide a record of microbial response to the PETM and establish the value of magnetofossils as palaeoenvironmental indicators. Understanding the response of marine productivity and CO2 drawdown to past warming events can provide important insights into the future. Here, the authors use bacterial magnetite nanoparticle fossils to reconstruct nutrient supply and marine deoxygenation during the Palaeocene–Eocene Thermal Maximum.
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Affiliation(s)
- Liao Chang
- Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, 100871, Beijing, China. .,Laboratory for Marine Geology, Qingdao National Laboratory for Marine Science and Technology, 266071, Qingdao, China. .,Institute of Ocean Research, Peking University, 100871, Beijing, China.
| | - Richard J Harrison
- Department of Earth Sciences, University of Cambridge, Cambridge, CB2 3EQ, UK
| | - Fan Zeng
- Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, 100871, Beijing, China
| | - Thomas A Berndt
- Laboratory of Orogenic Belts and Crustal Evolution, School of Earth and Space Sciences, Peking University, 100871, Beijing, China
| | - Andrew P Roberts
- Research School of Earth Sciences, Australian National University, Canberra, ACT, 2601, Australia
| | - David Heslop
- Research School of Earth Sciences, Australian National University, Canberra, ACT, 2601, Australia
| | - Xiang Zhao
- Research School of Earth Sciences, Australian National University, Canberra, ACT, 2601, Australia
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164
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Vargas G, Cypriano J, Correa T, Leão P, Bazylinski DA, Abreu F. Applications of Magnetotactic Bacteria, Magnetosomes and Magnetosome Crystals in Biotechnology and Nanotechnology: Mini-Review. Molecules 2018; 23:E2438. [PMID: 30249983 PMCID: PMC6222368 DOI: 10.3390/molecules23102438] [Citation(s) in RCA: 85] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 09/17/2018] [Accepted: 09/20/2018] [Indexed: 12/31/2022] Open
Abstract
Magnetotactic bacteria (MTB) biomineralize magnetosomes, which are defined as intracellular nanocrystals of the magnetic minerals magnetite (Fe₃O₄) or greigite (Fe₃S₄) enveloped by a phospholipid bilayer membrane. The synthesis of magnetosomes is controlled by a specific set of genes that encode proteins, some of which are exclusively found in the magnetosome membrane in the cell. Over the past several decades, interest in nanoscale technology (nanotechnology) and biotechnology has increased significantly due to the development and establishment of new commercial, medical and scientific processes and applications that utilize nanomaterials, some of which are biologically derived. One excellent example of a biological nanomaterial that is showing great promise for use in a large number of commercial and medical applications are bacterial magnetite magnetosomes. Unlike chemically-synthesized magnetite nanoparticles, magnetosome magnetite crystals are stable single-magnetic domains and are thus permanently magnetic at ambient temperature, are of high chemical purity, and display a narrow size range and consistent crystal morphology. These physical/chemical features are important in their use in biotechnological and other applications. Applications utilizing magnetite-producing MTB, magnetite magnetosomes and/or magnetosome magnetite crystals include and/or involve bioremediation, cell separation, DNA/antigen recovery or detection, drug delivery, enzyme immobilization, magnetic hyperthermia and contrast enhancement of magnetic resonance imaging. Metric analysis using Scopus and Web of Science databases from 2003 to 2018 showed that applied research involving magnetite from MTB in some form has been focused mainly in biomedical applications, particularly in magnetic hyperthermia and drug delivery.
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Affiliation(s)
- Gabriele Vargas
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Avenida Carlos Chagas Filho, 373, CCS, UFRJ, Rio de Janeiro, RJ 21941-902, Brazil.
| | - Jefferson Cypriano
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Avenida Carlos Chagas Filho, 373, CCS, UFRJ, Rio de Janeiro, RJ 21941-902, Brazil.
| | - Tarcisio Correa
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Avenida Carlos Chagas Filho, 373, CCS, UFRJ, Rio de Janeiro, RJ 21941-902, Brazil.
| | - Pedro Leão
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Avenida Carlos Chagas Filho, 373, CCS, UFRJ, Rio de Janeiro, RJ 21941-902, Brazil.
| | - Dennis A Bazylinski
- School of Life Sciences, University of Nevada at Las Vegas, Las Vegas, NV 89154-4004, USA.
| | - Fernanda Abreu
- Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Avenida Carlos Chagas Filho, 373, CCS, UFRJ, Rio de Janeiro, RJ 21941-902, Brazil.
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165
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Bastos-Arrieta J, Revilla-Guarinos A, Uspal WE, Simmchen J. Bacterial Biohybrid Microswimmers. Front Robot AI 2018; 5:97. [PMID: 33500976 PMCID: PMC7805739 DOI: 10.3389/frobt.2018.00097] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Accepted: 07/30/2018] [Indexed: 12/12/2022] Open
Abstract
Over millions of years, Nature has optimized the motion of biological systems at the micro and nanoscales. Motor proteins to motile single cells have managed to overcome Brownian motion and solve several challenges that arise at low Reynolds numbers. In this review, we will briefly describe naturally motile systems and their strategies to move, starting with a general introduction that surveys a broad range of developments, followed by an overview about the physical laws and parameters that govern and limit motion at the microscale. We characterize some of the classes of biological microswimmers that have arisen in the course of evolution, as well as the hybrid structures that have been constructed based on these, ranging from Montemagno's ATPase motor to the SpermBot. Thereafter, we maintain our focus on bacteria and their biohybrids. We introduce the inherent properties of bacteria as a natural microswimmer and explain the different principles bacteria use for their motion. We then elucidate different strategies that have been employed for the coupling of a variety of artificial microobjects to the bacterial surface, and evaluate the different effects the coupled objects have on the motion of the "biohybrid." Concluding, we give a short overview and a realistic evaluation of proposed applications in the field.
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Affiliation(s)
| | - Ainhoa Revilla-Guarinos
- Department of General Microbiology, Institute of Microbiology, Technische Universität Dresden, Dresden, Germany
| | - William E Uspal
- Department of Theory of Inhomogeneous Condensed Matter, Max-Planck-Institut für Intelligente Systeme, Stuttgart, Germany.,IV. Institut für Theoretische Physik, Universität Stuttgart, Stuttgart, Germany
| | - Juliane Simmchen
- Physikalische Chemie, Technische Universität Dresden, Dresden, Germany
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166
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Wang X, Xiao Y, Hao H, Zhang Y, Xu X, Tang R. Therapeutic Potential of Biomineralization‐Based Engineering. ADVANCED THERAPEUTICS 2018. [DOI: 10.1002/adtp.201800079] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Xiaoyu Wang
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Yun Xiao
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Haibin Hao
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Ying Zhang
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Xurong Xu
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
| | - Ruikang Tang
- Qiushi Academy for Advanced StudiesZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
- Center for Biomaterials and Biopathways, Department of ChemistryZhejiang University No. 38 Zheda Road Hangzhou Zhejiang 310027 China
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167
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Ren E, Lei Z, Wang J, Zhang Y, Liu G. Magnetosome Modification: From Bio-Nano Engineering Toward Nanomedicine. ADVANCED THERAPEUTICS 2018. [DOI: 10.1002/adtp.201800080] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- En Ren
- State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics and Center for Molecular Imaging and Translational Medicine; School of Public Health; Xiamen University; Xiamen 361102 China
| | - Zhao Lei
- State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics and Center for Molecular Imaging and Translational Medicine; School of Public Health; Xiamen University; Xiamen 361102 China
| | - Junqing Wang
- State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics and Center for Molecular Imaging and Translational Medicine; School of Public Health; Xiamen University; Xiamen 361102 China
| | - Yang Zhang
- State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics and Center for Molecular Imaging and Translational Medicine; School of Public Health; Xiamen University; Xiamen 361102 China
| | - Gang Liu
- State Key Laboratory of Cellular Stress Biology; Innovation Center for Cell Biology; School of Life Sciences; Xiamen University; Xiamen 361102 China
- The MOE Key Laboratory of Spectrochemical Analysis & Instrumentation; College of Chemistry and Chemical Engineering; Xiamen University; Xiamen 361005 China
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168
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Keim CN, Duarte de Melo R, Almeida FP, Lins de Barros HGP, Farina M, Acosta-Avalos D. Effect of applied magnetic fields on motility and magnetotaxis in the uncultured magnetotactic multicellular prokaryote 'Candidatus Magnetoglobus multicellularis'. ENVIRONMENTAL MICROBIOLOGY REPORTS 2018; 10:465-474. [PMID: 29573371 DOI: 10.1111/1758-2229.12640] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2017] [Revised: 02/27/2018] [Accepted: 03/13/2018] [Indexed: 06/08/2023]
Abstract
Magnetotactic bacteria are found in the chemocline of aquatic environments worldwide. They produce nanoparticles of magnetic minerals arranged in chains in the cytoplasm, which enable these microorganisms to align to magnetic fields while swimming propelled by flagella. Magnetotactic bacteria are diverse phylogenetically and morphologically, including cocci, rods, vibria, spirilla and also multicellular forms, known as magnetotactic multicellular prokaryotes (MMPs). We used video-microscopy to study the motility of the uncultured MMP 'Candidatus Magnetoglobus multicellularis' under applied magnetic fields ranging from 0.9 to 32 Oersted (Oe). The bidimensional projections of the tridimensional trajectories where interpreted as plane projections of cylindrical helices and fitted as sinusoidal curves. The results showed that 'Ca. M. multicellularis' do not orient efficiently to low magnetic fields, reaching an efficiency of about 0.65 at 0.9-1.5 Oe, which are four to six times the local magnetic field. Good efficiency (0.95) is accomplished for magnetic fields ≥10 Oe. For comparison, unicellular magnetotactic microorganisms reach such efficiency at the local magnetic field. Considering that the magnetic moment of 'Ca. M. multicellularis' is sufficient for efficient alignment at the Earth's magnetic field, we suggest that misalignments are due to flagella movements, which could be driven by photo-, chemo- and/or other types of taxis.
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Affiliation(s)
- Carolina N Keim
- Instituto de Microbiologia Paulo de Góes, CCS, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Cidade Universitária, Rio de Janeiro, RJ, 21941-902, Brazil
| | - Roger Duarte de Melo
- Centro Brasileiro de Pesquisas Físicas - CBPF, Rua Xavier Sigaud 150, Urca, Rio de Janeiro, RJ, 22290-180, Brazil
| | - Fernando P Almeida
- Instituto de Microbiologia Paulo de Góes, CCS, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Cidade Universitária, Rio de Janeiro, RJ, 21941-902, Brazil
| | - Henrique G P Lins de Barros
- Centro Brasileiro de Pesquisas Físicas - CBPF, Rua Xavier Sigaud 150, Urca, Rio de Janeiro, RJ, 22290-180, Brazil
| | - Marcos Farina
- Instituto de Ciências Biomédicas, Universidade Federal do Rio de Janeiro, Av. Carlos Chagas Filho, 373, Cidade Universitária, Rio de Janeiro, 21941-902, Brazil
| | - Daniel Acosta-Avalos
- Centro Brasileiro de Pesquisas Físicas - CBPF, Rua Xavier Sigaud 150, Urca, Rio de Janeiro, RJ, 22290-180, Brazil
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169
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Chen H, Zhang SD, Chen L, Cai Y, Zhang WJ, Song T, Wu LF. Efficient Genome Editing of Magnetospirillum magneticum AMB-1 by CRISPR-Cas9 System for Analyzing Magnetotactic Behavior. Front Microbiol 2018; 9:1569. [PMID: 30065707 PMCID: PMC6056624 DOI: 10.3389/fmicb.2018.01569] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Accepted: 06/25/2018] [Indexed: 12/17/2022] Open
Abstract
Magnetotactic bacteria (MTB) are a diverse group of microorganisms capable of using geomagnetic fields for navigation. This magnetotactic behavior can help microorganisms move toward favorable habitats for optimal growth and reproduction. A comprehensive understanding of the magnetotactic mechanism at molecular levels requires highly efficient genomic editing tools, which remain underdeveloped in MTB. Here, we adapted an engineered CRISPR-Cas9 system for efficient inactivation of genes in a widely used MTB model strain, Magnetospirillum magneticum AMB-1. By combining a nuclease-deficient Cas9 (dCas9) and single-guide RNA (sgRNA), a CRISPR interference system was successfully developed to repress amb0994 expression. Furthermore, we constructed an in-frame deletion mutant of amb0994 by developing a CRISPR-Cas9 system. This mutant produces normal magnetosomes; however, its response to abrupt magnetic field reversals is faster than wild-type strain. This behavioral difference is probably a consequence of altered flagella function, as suggested with our dynamics simulation study by modeling M. magneticum AMB-1 cell as an ellipsoid. These data indicate that, Amb0994 is involved in the cellular response to magnetic torque changes via controlling flagella. In summary, this study, besides contributing to a better understanding of magnetotaxis mechanism, demonstrated the CRISPR-(d)Cas9 system as a useful genetic tool for efficient genome editing in MTB.
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Affiliation(s)
- Haitao Chen
- Beijing Key Laboratory of Biological Electromagnetism, Institute of Electrical Engineering, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
| | - Sheng-Da Zhang
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
- Deep-Sea Microbial Cell Biology, Department of Deep Sea Sciences, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China
| | - Linjie Chen
- Beijing Key Laboratory of Biological Electromagnetism, Institute of Electrical Engineering, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
| | - Yao Cai
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing, China
| | - Wei-Jia Zhang
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
- Deep-Sea Microbial Cell Biology, Department of Deep Sea Sciences, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China
| | - Tao Song
- Beijing Key Laboratory of Biological Electromagnetism, Institute of Electrical Engineering, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
| | - Long-Fei Wu
- France-China International Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, CNRS-Marseille/CAS, Beijing, China
- Aix Marseille Univ, Centre National de la Recherche Scientifique, LCB, Marseille, France
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170
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Farjadian F, Moghoofei M, Mirkiani S, Ghasemi A, Rabiee N, Hadifar S, Beyzavi A, Karimi M, Hamblin MR. Bacterial components as naturally inspired nano-carriers for drug/gene delivery and immunization: Set the bugs to work? Biotechnol Adv 2018; 36:968-985. [PMID: 29499341 PMCID: PMC5971145 DOI: 10.1016/j.biotechadv.2018.02.016] [Citation(s) in RCA: 73] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 02/20/2018] [Accepted: 02/26/2018] [Indexed: 12/28/2022]
Abstract
Drug delivery is a rapidly growing area of research motivated by the nanotechnology revolution, the ideal of personalized medicine, and the desire to reduce the side effects of toxic anti-cancer drugs. Amongst a bewildering array of different nanostructures and nanocarriers, those examples that are fundamentally bio-inspired and derived from natural sources are particularly preferred. Delivery of vaccines is also an active area of research in this field. Bacterial cells and their components that have been used for drug delivery, include the crystalline cell-surface layer known as "S-layer", bacterial ghosts, bacterial outer membrane vesicles, and bacterial products or derivatives (e.g. spores, polymers, and magnetic nanoparticles). Considering the origin of these components from potentially pathogenic microorganisms, it is not surprising that they have been applied for vaccines and immunization. The present review critically summarizes their applications focusing on their advantages for delivery of drugs, genes, and vaccines.
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Affiliation(s)
- Fatemeh Farjadian
- Pharmaceutical Sciences Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Mohsen Moghoofei
- Department of Microbiology, Faculty of Medicine, Kermanshah University of Medical Sciences, Kermanshah, Iran
| | - Soroush Mirkiani
- Biomaterials Laboratory, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran
| | - Amir Ghasemi
- Department of Materials Science and Engineering, Sharif University of Technology, Tehran, Iran
| | - Navid Rabiee
- Department of Chemistry, Shahid Beheshti University, Tehran, Iran
| | - Shima Hadifar
- Department of Mycobacteriology and Pulmonary Research, Pasteur Institute of Iran, Tehran, Iran
| | - Ali Beyzavi
- Koch institute of MIT, 500 Main Street, Cambridge, MA, USA
| | - Mahdi Karimi
- Cellular and Molecular Research Center, Iran University of Medical Sciences, Tehran, Iran; Department of Medical Nanotechnology, Faculty of Advanced Technologies in Medicine, Iran University of Medical Sciences, Tehran, Iran; Wellman Center for Photomedicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA.
| | - Michael R Hamblin
- Wellman Center for Photomedicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA; Department of Dermatology, Harvard Medical School, Boston, MA 02115, USA; Harvard-MIT Division of Health Sciences and Technology, Cambridge, MA 02139, USA.
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171
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Tottori S, Nelson BJ. Controlled Propulsion of Two-Dimensional Microswimmers in a Precessing Magnetic Field. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2018; 14:e1800722. [PMID: 29749100 DOI: 10.1002/smll.201800722] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Revised: 03/20/2018] [Indexed: 06/08/2023]
Abstract
Magnetically actuated micro-/nanoswimmers can potentially be used in noninvasive biomedical applications, such as targeted drug delivery and micromanipulation. Herein, two-dimensional (2D) rigid ferromagnetic microstructures are shown to be capable of propelling themselves in three dimensions at low Reynolds numbers in a precessing field. Importantly, the above propulsion relies neither on soft structure deformation nor on the geometrical chirality of swimmers, but is rather driven by the dynamic chirality generated by field precession, which allows an almost unconstrained choice of materials and fabrication methods. Therefore, the swimming performance is systematically investigated as a function of precession angle and geometric design. One disadvantage of the described propulsion method is that the fabricated 2D swimmers are achiral, which means that the forward/backward swimming direction cannot be controlled. However, it has been found that asymmetric 2D swimmers always propel themselves toward their longer arm, which implies that dynamic chirality can be constrained to be either right-handed or left-handed by permanent magnetization. Thus, the simplicity of fabrication and possibility of dynamic chirality control make the developed method ideal for applications and fundamental studies that require a large number of swimmers.
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Affiliation(s)
- Soichiro Tottori
- Institute of Robotics and Intelligent Systems, ETH Zurich, Zurich, CH-8092, Switzerland
| | - Bradley J Nelson
- Institute of Robotics and Intelligent Systems, ETH Zurich, Zurich, CH-8092, Switzerland
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172
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Wang B, Zhang Y, Zhang L. Recent progress on micro- and nano-robots: towards in vivo tracking and localization. Quant Imaging Med Surg 2018; 8:461-479. [PMID: 30050781 PMCID: PMC6037952 DOI: 10.21037/qims.2018.06.07] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Accepted: 06/18/2018] [Indexed: 12/16/2022]
Affiliation(s)
- Ben Wang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong, China
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Yabin Zhang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong, China
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Li Zhang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong, China
- Chow Yuk Ho Technology Centre for Innovative Medicine, The Chinese University of Hong Kong, Hong Kong, China
- T Stone Robotics Institute, The Chinese University of Hong Kong, Hong Kong, China
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173
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Seghal Kiran G, Ramasamy P, Sekar S, Ramu M, Hassan S, Ninawe A, Selvin J. Synthetic biology approaches: Towards sustainable exploitation of marine bioactive molecules. Int J Biol Macromol 2018; 112:1278-1288. [DOI: 10.1016/j.ijbiomac.2018.01.149] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2017] [Revised: 01/18/2018] [Accepted: 01/21/2018] [Indexed: 12/18/2022]
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174
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Rodelli D, Jovane L, Roberts AP, Cypriano J, Abreu F, Lins U. Fingerprints of partial oxidation of biogenic magnetite from cultivated and natural marine magnetotactic bacteria using synchrotron radiation. ENVIRONMENTAL MICROBIOLOGY REPORTS 2018; 10:337-343. [PMID: 29611897 DOI: 10.1111/1758-2229.12644] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 03/22/2018] [Indexed: 06/08/2023]
Abstract
Magnetotactic bacteria are a multi-phyletic group of bacteria that synthesize membrane-bound magnetic minerals. Understanding the preservation of these minerals in various environments (e.g., with varying oxygen concentrations and iron supply) is important for understanding their role as carriers of primary magnetizations in sediments and sedimentary rocks. Here we present X-ray near edge structure (XANES) spectra for Fe in magnetotactic bacteria samples from recent sediments to assess surface oxidation and crystal structure changes in bacterial magnetite during early burial. Our results are compared with a XANES spectrum of cultivated Magnetofaba australis samples, and with magnetic properties, and indicate that oxidation of magnetite to maghemite increases with depth in the sediment due to longer exposure to molecular oxygen. These results are relevant to understanding magnetic signatures carried by magnetofossils in oxic sediments and sedimentary rocks of different ages.
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Affiliation(s)
- D Rodelli
- Instituto Oceanográfico, Universidade de São Paulo, São Paulo, 05508-120, Brazil
| | - L Jovane
- Instituto Oceanográfico, Universidade de São Paulo, São Paulo, 05508-120, Brazil
| | - A P Roberts
- Research School of Earth Sciences, Australian National University, Canberra, ACT 2601, Australia
| | - J Cypriano
- Instituto de Microbiologia Paulo de Goes, Unviversidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-902, Brazil
| | - F Abreu
- Instituto de Microbiologia Paulo de Goes, Unviversidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-902, Brazil
| | - U Lins
- Instituto de Microbiologia Paulo de Goes, Unviversidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-902, Brazil
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175
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Subgroup Characteristics of Marine Methane-Oxidizing ANME-2 Archaea and Their Syntrophic Partners as Revealed by Integrated Multimodal Analytical Microscopy. Appl Environ Microbiol 2018; 84:AEM.00399-18. [PMID: 29625978 DOI: 10.1128/aem.00399-18] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Accepted: 03/31/2018] [Indexed: 02/06/2023] Open
Abstract
Phylogenetically diverse environmental ANME archaea and sulfate-reducing bacteria cooperatively catalyze the anaerobic oxidation of methane oxidation (AOM) in multicelled consortia within methane seep environments. To better understand these cells and their symbiotic associations, we applied a suite of electron microscopy approaches, including correlative fluorescence in situ hybridization-electron microscopy (FISH-EM), transmission electron microscopy (TEM), and serial block face scanning electron microscopy (SBEM) three-dimensional (3D) reconstructions. FISH-EM of methane seep-derived consortia revealed phylogenetic variability in terms of cell morphology, ultrastructure, and storage granules. Representatives of the ANME-2b clade, but not other ANME-2 groups, contained polyphosphate-like granules, while some bacteria associated with ANME-2a/2c contained two distinct phases of iron mineral chains resembling magnetosomes. 3D segmentation of two ANME-2 consortium types revealed cellular volumes of ANME and their symbiotic partners that were larger than previous estimates based on light microscopy. Polyphosphate-like granule-containing ANME (tentatively termed ANME-2b) were larger than both ANME with no granules and partner bacteria. This cell type was observed with up to 4 granules per cell, and the volume of the cell was larger in proportion to the number of granules inside it, but the percentage of the cell occupied by these granules did not vary with granule number. These results illuminate distinctions between ANME-2 archaeal lineages and partnering bacterial populations that are apparently unified in their ability to perform anaerobic methane oxidation.IMPORTANCE Methane oxidation in anaerobic environments can be accomplished by a number of archaeal groups, some of which live in syntrophic relationships with bacteria in structured consortia. Little is known of the distinguishing characteristics of these groups. Here, we applied imaging approaches to better understand the properties of these cells. We found unexpected morphological, structural, and volume variability of these uncultured groups by correlating fluorescence labeling of cells with electron microscopy observables.
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176
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Magnetic-field induced rotation of magnetosome chains in silicified magnetotactic bacteria. Sci Rep 2018; 8:7699. [PMID: 29769616 PMCID: PMC5955880 DOI: 10.1038/s41598-018-25972-x] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Accepted: 04/19/2018] [Indexed: 11/21/2022] Open
Abstract
Understanding the biological processes enabling magnetotactic bacteria to maintain oriented chains of magnetic iron-bearing nanoparticles called magnetosomes is a major challenge. The study aimed to constrain the role of an external applied magnetic field on the alignment of magnetosome chains in Magnetospirillum magneticum AMB-1 magnetotactic bacteria immobilized within a hydrated silica matrix. A deviation of the chain orientation was evidenced, without significant impact on cell viability, which was preserved after the field was turned-off. Transmission electron microscopy showed that the crystallographic orientation of the nanoparticles within the chains were preserved. Off-axis electron holography evidenced that the change in magnetosome orientation was accompanied by a shift from parallel to anti-parallel interactions between individual nanocrystals. The field-induced destructuration of the chain occurs according to two possible mechanisms: (i) each magnetosome responds individually and reorients in the magnetic field direction and/or (ii) short magnetosome chains deviate in the magnetic field direction. This work enlightens the strong dynamic character of the magnetosome assembly and widens the potentialities of magnetotactic bacteria in bionanotechnology.
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177
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Meng F, Matsunaga D, Golestanian R. Clustering of Magnetic Swimmers in a Poiseuille Flow. PHYSICAL REVIEW LETTERS 2018; 120:188101. [PMID: 29775341 DOI: 10.1103/physrevlett.120.188101] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Revised: 01/31/2018] [Indexed: 06/08/2023]
Abstract
We investigate the collective behavior of magnetic swimmers, which are suspended in a Poiseuille flow and placed under an external magnetic field, using analytical techniques and Brownian dynamics simulations. We find that the interplay between intrinsic activity, external alignment, and magnetic dipole-dipole interactions leads to longitudinal structure formation. Our work sheds light on a recent experimental observation of a clustering instability in this system.
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Affiliation(s)
- Fanlong Meng
- Rudolf Peierls Centre for Theoretical Physics, University of Oxford, Oxford OX1 3NP, United Kingdom
| | - Daiki Matsunaga
- Rudolf Peierls Centre for Theoretical Physics, University of Oxford, Oxford OX1 3NP, United Kingdom
| | - Ramin Golestanian
- Rudolf Peierls Centre for Theoretical Physics, University of Oxford, Oxford OX1 3NP, United Kingdom
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178
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Orue I, Marcano L, Bender P, García-Prieto A, Valencia S, Mawass MA, Gil-Cartón D, Alba Venero D, Honecker D, García-Arribas A, Fernández Barquín L, Muela A, Fdez-Gubieda ML. Configuration of the magnetosome chain: a natural magnetic nanoarchitecture. NANOSCALE 2018; 10:7407-7419. [PMID: 29557439 DOI: 10.1039/c7nr08493e] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Magnetospirillum gryphiswaldense is a microorganism with the ability to biomineralize magnetite nanoparticles, called magnetosomes, and arrange them into a chain that behaves like a magnetic compass. Rather than straight lines, magnetosome chains are slightly bent, as evidenced by electron cryotomography. Our experimental and theoretical results suggest that due to the competition between the magnetocrystalline and shape anisotropies, the effective magnetic moment of individual magnetosomes is tilted out of the [111] crystallographic easy axis of magnetite. This tilt does not affect the direction of the chain net magnetic moment, which remains along the [111] axis, but explains the arrangement of magnetosomes in helical-like shaped chains. Indeed, we demonstrate that the chain shape can be reproduced by considering an interplay between the magnetic dipolar interactions between magnetosomes, ruled by the orientation of the magnetosome magnetic moment, and a lipid/protein-based mechanism, modeled as an elastic recovery force exerted on the magnetosomes.
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Affiliation(s)
- I Orue
- SGIker, Universidad del País Vasco - UPV/EHU, 48940 Leioa, Spain
| | - L Marcano
- Dpto. Electricidad y Electrónica, Universidad del País Vasco - UPV/EHU, 48940 Leioa, Spain.
| | - P Bender
- CITIMAC, Universidad de Cantabria, 39005 Santander, Spain
| | - A García-Prieto
- Dpto. Física Aplicada I, Universidad del País Vasco - UPV/EHU, 48013 Bilbao, Spain and BCMaterials, Basque Center for Materials, Applications and Nanostructures, UPV/EHU Science Park, 48940 Leioa, Spain
| | - S Valencia
- Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - M A Mawass
- Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - D Gil-Cartón
- Structural Biology Unit, CIC bioGUNE, CIBERehd, 48160 Derio, Spain
| | - D Alba Venero
- ISIS, STFC Rutherford Appleton Laboratory, Chilton, Didcot OX11 0QX, UK
| | - D Honecker
- Institut Laue-Langevin, 38042 Grenoble, France
| | - A García-Arribas
- Dpto. Electricidad y Electrónica, Universidad del País Vasco - UPV/EHU, 48940 Leioa, Spain. and BCMaterials, Basque Center for Materials, Applications and Nanostructures, UPV/EHU Science Park, 48940 Leioa, Spain
| | | | - A Muela
- BCMaterials, Basque Center for Materials, Applications and Nanostructures, UPV/EHU Science Park, 48940 Leioa, Spain and Dpto. Inmunología, Microbiología y Parasitología, Universidad del País Vasco - UPV/EHU, 48940 Leioa, Spain
| | - M L Fdez-Gubieda
- Dpto. Electricidad y Electrónica, Universidad del País Vasco - UPV/EHU, 48940 Leioa, Spain. and BCMaterials, Basque Center for Materials, Applications and Nanostructures, UPV/EHU Science Park, 48940 Leioa, Spain
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179
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Kim JW, Jeong HK, Southard KM, Jun YW, Cheon J. Magnetic Nanotweezers for Interrogating Biological Processes in Space and Time. Acc Chem Res 2018; 51:839-849. [PMID: 29589897 DOI: 10.1021/acs.accounts.8b00004] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The ability to sense and manipulate the state of biological systems has been extensively advanced during the past decade with the help of recent developments in physical tools. Unlike standard genetic and pharmacological perturbation techniques-knockdown, overexpression, small molecule inhibition-that provide a basic on/off switching capability, these physical tools provide the capacity to control the spatial, temporal, and mechanical properties of the biological targets. Among the various physical cues, magnetism offers distinct advantages over light or electricity. Magnetic fields freely penetrate biological tissues and are already used for clinical applications. As one of the unique features, magnetic fields can be transformed into mechanical stimuli which can serve as a cue in regulating biological processes. However, their biological applications have been limited due to a lack of high-performance magnetism-to-mechanical force transducers with advanced spatiotemporal capabilities. In this Account, we present recent developments in magnetic nanotweezers (MNTs) as a useful tool for interrogating the spatiotemporal control of cells in living tissue. MNTs are composed of force-generating magnetic nanoparticles and field generators. Through proper design and the integration of individual components, MNTs deliver controlled mechanical stimulation to targeted biomolecules at any desired space and time. We first discuss about MNT configuration with different force-stimulation modes. By modulating geometry of the magnetic field generator, MNTs exert pulling, dipole-dipole attraction, and rotational forces to the target specifically and quantitatively. We discuss the key physical parameters determining force magnitude, which include magnetic field strength, magnetic field gradient, magnetic moment of the magnetic particle, as well as distance between the field generator and the particle. MNTs also can be used over a wide range of biological time scales. By simply adjusting the amplitude and phase of the applied current, MNTs based on electromagnets allow for dynamic control of the magnetic field from microseconds to hours. Chemical design and the nanoscale effects of magnetic particles are also essential for optimizing MNT performance. We discuss key strategies to develop magnetic nanoparticles with improved force-generation capabilities with a particular focus on the effects of size, shape, and composition of the nanoparticles. We then introduce various strategies and design considerations for target-specific biomechanical stimulations with MNTs. One-to-one particle-receptor engagement for delivering a defined force to the targeted receptor and the small size of the nanoparticles are important. Finally, we demonstrate the utility of MNTs for manipulating biological functions and activities with various spatial (single molecule/cell to organisms) and temporal resolution (microseconds to days). MNTs have the potential to be utilized in many exciting applications across diverse biological systems spanning from fundamental biology investigations of spatial and mechanical signaling dynamics at the single-cell and systems levels to in vivo therapeutic applications.
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Affiliation(s)
- Ji-wook Kim
- Center for NanoMedicine, Institute for Basic Science (IBS), Seoul 03722, Republic of Korea
- Yonsei-IBS Institute, Yonsei University, Seoul 03722, Republic of Korea
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea
| | - Hee-kyung Jeong
- Center for NanoMedicine, Institute for Basic Science (IBS), Seoul 03722, Republic of Korea
- Yonsei-IBS Institute, Yonsei University, Seoul 03722, Republic of Korea
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea
| | - Kaden M. Southard
- Department of Otolaryngology, University of California, San Francisco, San Francisco, California 94115, United States
- Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California 94115, United States
- Programs in Chemistry and Chemical Biology, University of California, San Francisco, San Francisco, California 94115, United States
| | - Young-wook Jun
- Center for NanoMedicine, Institute for Basic Science (IBS), Seoul 03722, Republic of Korea
- Yonsei-IBS Institute, Yonsei University, Seoul 03722, Republic of Korea
- Department of Otolaryngology, University of California, San Francisco, San Francisco, California 94115, United States
- Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, California 94115, United States
- Programs in Chemistry and Chemical Biology, University of California, San Francisco, San Francisco, California 94115, United States
| | - Jinwoo Cheon
- Center for NanoMedicine, Institute for Basic Science (IBS), Seoul 03722, Republic of Korea
- Yonsei-IBS Institute, Yonsei University, Seoul 03722, Republic of Korea
- Department of Chemistry, Yonsei University, Seoul 03722, Republic of Korea
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180
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Accumulation and Dissolution of Magnetite Crystals in a Magnetically Responsive Ciliate. Appl Environ Microbiol 2018; 84:AEM.02865-17. [PMID: 29439993 DOI: 10.1128/aem.02865-17] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2018] [Accepted: 02/05/2018] [Indexed: 11/20/2022] Open
Abstract
Magnetotactic bacteria (MTB) represent a group of microorganisms that are widespread in aquatic habitats and thrive at oxic-anoxic interfaces. They are able to scavenge high concentrations of iron thanks to the biomineralization of magnetic crystals in their unique organelles, the so-called magnetosome chains. Although their biodiversity has been intensively studied, their ecology and impact on iron cycling remain largely unexplored. Predation by protozoa was suggested as one of the ecological processes that could be involved in the release of iron back into the ecosystem. Magnetic protozoa were previously observed in aquatic environments, but their diversity and the fate of particulate iron during grazing are poorly documented. In this study, we report the morphological and molecular characterizations of a magnetically responsive MTB-grazing protozoan able to ingest high quantities of MTB. This protozoan is tentatively identified as Uronema marinum, a ciliate known to be a predator of bacteria. Using light and electron microscopy, we investigated in detail the vacuoles in which the lysis of phagocytized prokaryotes occurs. We carried out high-resolution observations of aligned magnetosome chains and ongoing dissolution of crystals. Particulate iron in the ciliate represented approximately 0.01% of its total volume. We show the ubiquity of this interaction in other types of environments and describe different grazing strategies. These data contribute to the mounting evidence that the interactions between MTB and protozoa might play a significant role in iron turnover in microaerophilic habitats.IMPORTANCE Identifying participants of each biogeochemical cycle is a prerequisite to our understanding of ecosystem functioning. Magnetotactic bacteria (MTB) participate in iron cycling by concentrating large amounts of biomineralized iron minerals in their cells, which impacts their chemical environment at, or below, the oxic-anoxic transition zone in aquatic habitats. It was shown that some protozoa inhabiting this niche could become magnetic by the ingestion of magnetic crystals biomineralized by grazed MTB. In this study, we show that magnetic MTB grazers are commonly observed in marine and freshwater sediments and can sometimes accumulate very large amounts of particulate iron. We describe here different phagocytosis strategies, determined using magnetic particles from MTB as tracers after their ingestion by the protozoa. This study paves the way for potential scientific or medical applications using MTB grazers as magnetosome hyperaccumulators.
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181
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Krause AL, Burton AM, Fadai NT, Van Gorder RA. Emergent structures in reaction-advection-diffusion systems on a sphere. Phys Rev E 2018; 97:042215. [PMID: 29758621 DOI: 10.1103/physreve.97.042215] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2017] [Indexed: 05/03/2023]
Abstract
We demonstrate unusual effects due to the addition of advection into a two-species reaction-diffusion system on the sphere. We find that advection introduces emergent behavior due to an interplay of the traditional Turing patterning mechanisms with the compact geometry of the sphere. Unidirectional advection within the Turing space of the reaction-diffusion system causes patterns to be generated at one point of the sphere, and transported to the antipodal point where they are destroyed. We illustrate these effects numerically and deduce conditions for Turing instabilities on local projections to understand the mechanisms behind these behaviors. We compare this behavior to planar advection which is shown to only transport patterns across the domain. Analogous transport results seem to hold for the sphere under azimuthal transport or away from the antipodal points in unidirectional flow regimes.
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Affiliation(s)
- Andrew L Krause
- Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, United Kingdom
| | - Abigail M Burton
- Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, United Kingdom
| | - Nabil T Fadai
- Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, United Kingdom
| | - Robert A Van Gorder
- Mathematical Institute, University of Oxford, Andrew Wiles Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, United Kingdom
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182
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Goychuk I. Sensing Magnetic Fields with Magnetosensitive Ion Channels. SENSORS (BASEL, SWITZERLAND) 2018; 18:E728. [PMID: 29495645 PMCID: PMC5877195 DOI: 10.3390/s18030728] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2018] [Revised: 02/13/2018] [Accepted: 02/13/2018] [Indexed: 12/23/2022]
Abstract
[-15]Magnetic nanoparticles are met across many biological species ranging from magnetosensitive bacteria, fishes, bees, bats, rats, birds, to humans. They can be both of biogenetic origin and due to environmental contamination, being either in paramagnetic or ferromagnetic state. The energy of such naturally occurring single-domain magnetic nanoparticles can reach up to 10-20 room k B T in the magnetic field of the Earth, which naturally led to supposition that they can serve as sensory elements in various animals. This work explores within a stochastic modeling framework a fascinating hypothesis of magnetosensitive ion channels with magnetic nanoparticles serving as sensory elements, especially, how realistic it is given a highly dissipative viscoelastic interior of living cells and typical sizes of nanoparticles possibly involved.
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Affiliation(s)
- Igor Goychuk
- Institute of Physics and Astronomy, University of Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam-Golm, Germany.
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183
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Usman M, Byrne JM, Chaudhary A, Orsetti S, Hanna K, Ruby C, Kappler A, Haderlein SB. Magnetite and Green Rust: Synthesis, Properties, and Environmental Applications of Mixed-Valent Iron Minerals. Chem Rev 2018; 118:3251-3304. [PMID: 29465223 DOI: 10.1021/acs.chemrev.7b00224] [Citation(s) in RCA: 182] [Impact Index Per Article: 30.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Mixed-valent iron [Fe(II)-Fe(III)] minerals such as magnetite and green rust have received a significant amount of attention over recent decades, especially in the environmental sciences. These mineral phases are intrinsic and essential parts of biogeochemical cycling of metals and organic carbon and play an important role regarding the mobility, toxicity, and redox transformation of organic and inorganic pollutants. The formation pathways, mineral properties, and applications of magnetite and green rust are currently active areas of research in geochemistry, environmental mineralogy, geomicrobiology, material sciences, environmental engineering, and environmental remediation. These aspects ultimately dictate the reactivity of magnetite and green rust in the environment, which has important consequences for the application of these mineral phases, for example in remediation strategies. In this review we discuss the properties, occurrence, formation by biotic as well as abiotic pathways, characterization techniques, and environmental applications of magnetite and green rust in the environment. The aim is to present a detailed overview of the key aspects related to these mineral phases which can be used as an important resource for researchers working in a diverse range of fields dealing with mixed-valent iron minerals.
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Affiliation(s)
- M Usman
- Environmental Mineralogy, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany.,Institute of Soil and Environmental Sciences , University of Agriculture , Faisalabad 38040 , Pakistan
| | - J M Byrne
- Geomicrobiology, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany
| | - A Chaudhary
- Environmental Mineralogy, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany.,Department of Environmental Science and Engineering , Government College University Faisalabad 38000 , Pakistan
| | - S Orsetti
- Environmental Mineralogy, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany
| | - K Hanna
- Univ Rennes, École Nationale Supérieure de Chimie de Rennes , CNRS, ISCR - UMR6226 , F-35000 Rennes , France
| | - C Ruby
- Laboratoire de Chimie Physique et Microbiologie pour l'Environnement , UMR 7564 CNRS-Université de Lorraine , 54600 Villers-Lès-Nancy , France
| | - A Kappler
- Geomicrobiology, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany
| | - S B Haderlein
- Environmental Mineralogy, Center for Applied Geosciences , University of Tübingen , 72074 Tübingen , Germany
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184
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An enhanced anti-tumor effect of apoptin-cecropin B on human hepatoma cells by using bacterial magnetic particle gene delivery system. Biochem Biophys Res Commun 2018; 496:719-725. [PMID: 29355529 DOI: 10.1016/j.bbrc.2018.01.108] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2018] [Accepted: 01/16/2018] [Indexed: 11/23/2022]
Abstract
The gene therapy of cancer, due to the limit of its efficiency and safety, has not been widely used in clinical. Recently, bacterial magnetic particles (BMPs), which are membrane-bound nanocrystals found in magnetotactic bacteria, have been exploited as a new gene delivery system. However, its application on gene therapy remains to be explored. In our previous study, we found that a combination of cecropin B (ABPs) and apoptin (VP3) could serve as an effective gene therapeutic agent. Thus, in this study, we used BMPs to deliver the co-expression plasmid of these two gene, namely pVAX1-VA, and evaluated its therapeutic effect on human hepatocellular carcinoma (HepG2). Our results showed that BMPs significantly improved the efficiency of gene transfection (almost 3-fold than Lipofectamine 2000 at 48 h, P < .001), which led to stronger apoptosis (in a peak almost 2-fold than Lipofectamine 2000-pVAX1-VA, P < .01) and growth inhibition of HepG2 cells. More importantly, compared with Lipofectamine 2000-pVAX1-VA group, BMP-pVAX1-VA strikingly inhibited tumor growth (0.60 ± 0.09 g vs. 0.88 ± 0.11 g, P < .05) in nude mouse tumor models and increased the tumor-infiltrating lymphocytes considerably without apparent cytotoxicity. These findings suggest that BMPs could be an attractive gene delivery system for gene therapy and provide a potential available treatment for human hepatocellular carcinoma and maybe some other kinds of tumors.
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185
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Rismani Yazdi S, Nosrati R, Stevens CA, Vogel D, Davies PL, Escobedo C. Magnetotaxis Enables Magnetotactic Bacteria to Navigate in Flow. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2018; 14:1702982. [PMID: 29205792 DOI: 10.1002/smll.201702982] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Revised: 09/29/2017] [Indexed: 06/07/2023]
Abstract
Magnetotactic bacteria (MTB) play an important role in Earth's biogeochemical cycles by transporting minerals in aquatic ecosystems, and have shown promise for controlled transport of microscale objects in flow conditions. However, how MTB traverse complex flow environments is not clear. Here, using microfluidics and high-speed imaging, it is revealed that magnetotaxis enables directed motion of Magnetospirillum magneticum over long distances in flow velocities ranging from 2 to 1260 µm s-1 , corresponding to shear rates ranging from 0.2 to 142 s-1 -a range relevant to both aquatic environments and biomedical applications. The ability of MTB to overcome a current is influenced by the flow, the magnetic field, and their relative orientation. MTB can overcome 2.3-fold higher flow velocities when directed to swim perpendicular to the flow as compared to upstream, as the latter orientation induces higher drag. The results indicate a threshold drag of 9.5 pN, corresponding to a flow velocity of 550 µm s-1 , where magnetotaxis enables MTB to overcome counterdirectional flow. These findings bring new insights into the interactions of MTB with complex flow environments relevant to aquatic ecosystems, while suggesting opportunities for in vivo applications of MTB in microbiorobotics and targeted drug delivery.
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Affiliation(s)
- Saeed Rismani Yazdi
- Department of Chemical Engineering, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Reza Nosrati
- Department of Chemical Engineering, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Corey A Stevens
- Department of Biomedical and Molecular Sciences, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - David Vogel
- Swiss Nanoscience Institute, University of Basel, Basel, 4056, Switzerland
| | - Peter L Davies
- Department of Biomedical and Molecular Sciences, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Carlos Escobedo
- Department of Chemical Engineering, Queen's University, Kingston, ON, K7L 3N6, Canada
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186
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Biehl P, Von der Lühe M, Dutz S, Schacher FH. Synthesis, Characterization, and Applications of Magnetic Nanoparticles Featuring Polyzwitterionic Coatings. Polymers (Basel) 2018; 10:E91. [PMID: 30966126 PMCID: PMC6414908 DOI: 10.3390/polym10010091] [Citation(s) in RCA: 79] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 01/11/2018] [Accepted: 01/12/2018] [Indexed: 01/04/2023] Open
Abstract
Throughout the last decades, magnetic nanoparticles (MNP) have gained tremendous interest in different fields of applications like biomedicine (e.g., magnetic resonance imaging (MRI), drug delivery, hyperthermia), but also more technical applications (e.g., catalysis, waste water treatment) have been pursued. Different surfactants and polymers are extensively used for surface coating of MNP to passivate the surface and avoid or decrease agglomeration, decrease or modulate biomolecule absorption, and in most cases increase dispersion stability. For this purpose, electrostatic or steric repulsion can be exploited and, in that regard, surface charge is the most important (hybrid) particle property. Therefore, polyelectrolytes are of great interest for nanoparticle coating, as they are able to stabilize the particles in dispersion by electrostatic repulsion due to their high charge densities. In this review article, we focus on polyzwitterions as a subclass of polyelectrolytes and their use as coating materials for MNP. In the context of biomedical applications, polyzwitterions are widely used as they exhibit antifouling properties and thus can lead to minimized protein adsorption and also long circulation times.
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Affiliation(s)
- Philip Biehl
- Institute of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstraße 10, 07743 Jena, Germany.
- Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743 Jena, Germany.
| | - Moritz Von der Lühe
- Institute of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstraße 10, 07743 Jena, Germany.
- Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743 Jena, Germany.
| | - Silvio Dutz
- Institute of Biomedical Engineering and Informatics, Technische Universität Ilmenau, 98693 Ilmenau, Germany.
| | - Felix H Schacher
- Institute of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstraße 10, 07743 Jena, Germany.
- Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743 Jena, Germany.
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187
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Kiani B, Faivre D, Klumpp S. Self-organization and stability of magnetosome chains-A simulation study. PLoS One 2018; 13:e0190265. [PMID: 29315342 PMCID: PMC5760029 DOI: 10.1371/journal.pone.0190265] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2017] [Accepted: 12/11/2017] [Indexed: 11/18/2022] Open
Abstract
Magnetotactic bacteria orient in magnetic fields with the help of their magnetosome chain, a linear structure of membrane enclosed magnetic nanoparticles (magnetosomes) anchored to a cytoskeletal filament. Here, we use simulations to study the assembly and the stability of magnetosome chains. We introduce a computational model describing the attachment of the magnetosomes to the filament and their magnetic interactions. We show that the filamentous backbone is crucial for the robust assembly of the magnetic particles into a linear chain, which in turn is key for the functionality of the chain in cellular orientation and magnetically directed swimming. In addition, we simulate the response to an external magnetic field that is rotated away from the axis of the filament, an experimental method used to probe the mechanical stability of the chain. The competition between alignment along the filament and alignment with the external fields leads to the rupture of a chain if the applied field exceeeds a threshold value. These observations are in agreement with previous experiments at the population level. Beyond that, our simulations provide a detailed picture of chain rupture at the single cell level, which is found to happen through two abrupt events, which both depend on the field strength and orientation. The re-formation of the chain structure after such rupture is found to be strongly sped up in the presence of a magnetic field parallel to the filament, an observation that may also be of interest for the design of self-healing materials. Our simulations underline the dynamic nature of the magnetosome chain. More generally, they show the rich complexity of self-assembly in systems with competing driving forces for alignment.
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Affiliation(s)
- Bahareh Kiani
- Department Theory & Bio-Systems, Max Planck Institute of Colloids and Interfaces, Science Park Golm 14424 Potsdam, Germany
- Department Biomaterials, Max Planck Institute of Colloids and Interfaces, Science Park Golm, 14424 Potsdam, Germany
- * E-mail: (BK); (SK)
| | - Damien Faivre
- Department Biomaterials, Max Planck Institute of Colloids and Interfaces, Science Park Golm, 14424 Potsdam, Germany
| | - Stefan Klumpp
- Department Theory & Bio-Systems, Max Planck Institute of Colloids and Interfaces, Science Park Golm 14424 Potsdam, Germany
- Institute for Nonlinear Dynamics, Georg August University of Goettingen, Friedrich-Hund-Platz 1, 37077 Goettingen, Germany
- * E-mail: (BK); (SK)
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188
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Yan L, Xing W. Methods to Study Magnetotactic Bacteria and Magnetosomes. J Microbiol Methods 2018. [DOI: 10.1016/bs.mim.2018.05.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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189
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Rismani Yazi S, Nosrati R, Stevens CA, Vogel D, Escobedo C. Migration of magnetotactic bacteria in porous media. BIOMICROFLUIDICS 2018; 12:011101. [PMID: 29531633 PMCID: PMC5828923 DOI: 10.1063/1.5024508] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 02/19/2018] [Indexed: 03/14/2024]
Abstract
Magnetotactic bacteria (MTB) migrate in complex porous sediments where fluid flow is ubiquitous. Here, we demonstrate that magnetotaxis enables MTB to migrate effectively through porous micromodels. Directed MTB can circumvent curved obstacles by traveling along the boundaries and pass flat obstacles by repeatedly switching between forward and backward runs. Magnetotaxis enables directed motion of MTB through heterogeneous porous media, overcoming tortuous flow fields with local velocities as high as 250 μm s-1. Our findings bring new insights into the migration behaviour of MTB in their natural habitats and their potential in vivo applications as microbiorobots.
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Affiliation(s)
- Saeed Rismani Yazi
- Department of Chemical Engineering, Queen's University, Kingston, Ontario K7L 3N6, Canada
| | - Reza Nosrati
- Department of Chemical Engineering, Queen's University, Kingston, Ontario K7L 3N6, Canada
| | - Corey A. Stevens
- Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada
| | - David Vogel
- Swiss Nanoscience Institute, University of Basel, Basel 4056, Switzerland
| | - Carlos Escobedo
- Department of Chemical Engineering, Queen's University, Kingston, Ontario K7L 3N6, Canada
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190
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Mosayebi J, Kiyasatfar M, Laurent S. Synthesis, Functionalization, and Design of Magnetic Nanoparticles for Theranostic Applications. Adv Healthc Mater 2017; 6. [PMID: 28990364 DOI: 10.1002/adhm.201700306] [Citation(s) in RCA: 115] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2017] [Revised: 06/14/2017] [Indexed: 12/13/2022]
Abstract
In order to translate nanotechnology into medical practice, magnetic nanoparticles (MNPs) have been presented as a class of non-invasive nanomaterials for numerous biomedical applications. In particular, MNPs have opened a door for simultaneous diagnosis and brisk treatment of diseases in the form of theranostic agents. This review highlights the recent advances in preparation and utilization of MNPs from the synthesis and functionalization steps to the final design consideration in evading the body immune system for therapeutic and diagnostic applications with addressing the most recent examples of the literature in each section. This study provides a conceptual framework of a wide range of synthetic routes classified mainly as wet chemistry, state-of-the-art microfluidic reactors, and biogenic routes, along with the most popular coating materials to stabilize resultant MNPs. Additionally, key aspects of prolonging the half-life of MNPs via overcoming the sequential biological barriers are covered through unraveling the biophysical interactions at the bio-nano interface and giving a set of criteria to efficiently modulate MNPs' physicochemical properties. Furthermore, concepts of passive and active targeting for successful cell internalization, by respectively exploiting the unique properties of cancers and novel targeting ligands are described in detail. Finally, this study extensively covers the recent developments in magnetic drug targeting and hyperthermia as therapeutic applications of MNPs. In addition, multi-modal imaging via fusion of magnetic resonance imaging, and also innovative magnetic particle imaging with other imaging techniques for early diagnosis of diseases are extensively provided.
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Affiliation(s)
- Jalal Mosayebi
- Department of Mechanical Engineering; Urmia University; Urmia 5756151818 Iran
| | - Mehdi Kiyasatfar
- Department of Mechanical Engineering; Urmia University; Urmia 5756151818 Iran
| | - Sophie Laurent
- Laboratory of NMR and Molecular Imaging; University of Mons; Mons Belgium
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191
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Mickoleit F, Schüler D. Generation of Multifunctional Magnetic Nanoparticles with Amplified Catalytic Activities by Genetic Expression of Enzyme Arrays on Bacterial Magnetosomes. ACTA ACUST UNITED AC 2017. [DOI: 10.1002/adbi.201700109] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Frank Mickoleit
- Department Microbiology; University of Bayreuth; Universitätsstraße 30 95447 Bayreuth Germany
| | - Dirk Schüler
- Department Microbiology; University of Bayreuth; Universitätsstraße 30 95447 Bayreuth Germany
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192
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Li J, Menguy N, Arrio MA, Sainctavit P, Juhin A, Wang Y, Chen H, Bunau O, Otero E, Ohresser P, Pan Y. Controlled cobalt doping in the spinel structure of magnetosome magnetite: new evidences from element- and site-specific X-ray magnetic circular dichroism analyses. J R Soc Interface 2017; 13:rsif.2016.0355. [PMID: 27512138 DOI: 10.1098/rsif.2016.0355] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Accepted: 07/14/2016] [Indexed: 02/05/2023] Open
Abstract
The biomineralization of magnetite nanocrystals (called magnetosomes) by magnetotactic bacteria (MTB) has attracted intense interest in biology, geology and materials science due to the precise morphology of the particles, the chain-like assembly and their unique magnetic properties. Great efforts have been recently made in producing transition metal-doped magnetosomes with modified magnetic properties for a range of applications. Despite some successful outcomes, the coordination chemistry and magnetism of such metal-doped magnetosomes still remain largely unknown. Here, we present new evidences from X-ray magnetic circular dichroism (XMCD) for element- and site-specific magnetic analyses that cobalt is incorporated in the spinel structure of the magnetosomes within Magnetospirillum magneticum AMB-1 through the replacement of Fe(2+) ions by Co(2+) ions in octahedral (Oh) sites of magnetite. Both XMCD at Fe and Co L2,3 edges, and energy-dispersive X-ray spectroscopy on transmission electron microscopy analyses reveal a heterogeneous distribution of cobalt occurring either in different particles or inside individual particles. Compared with non-doped one, cobalt-doped magnetosome sample has lower Verwey transition temperature and larger magnetic coercivity, related to the amount of doped cobalt. This study also demonstrates that the addition of trace cobalt in the growth medium can significantly improve both the cell growth and the magnetosome formation within M. magneticum AMB-1. Together with the cobalt occupancy within the spinel structure of magnetosomes, this study indicates that MTB may provide a promising biomimetic system for producing chains of metal-doped single-domain magnetite with an appropriate tuning of the magnetic properties for technological and biomedical applications.
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Affiliation(s)
- Jinhua Li
- Paleomagnetism and Geochronology Laboratory, Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Beijing 100029, People's Republic of China France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
| | - Nicolas Menguy
- France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China IMPMC, CNRS UMR 7590, Sorbonne Universités, MNHN, UPMC, IRD UMR 206, 75005 Paris, France
| | - Marie-Anne Arrio
- IMPMC, CNRS UMR 7590, Sorbonne Universités, MNHN, UPMC, IRD UMR 206, 75005 Paris, France
| | - Philippe Sainctavit
- IMPMC, CNRS UMR 7590, Sorbonne Universités, MNHN, UPMC, IRD UMR 206, 75005 Paris, France Synchrotron SOLEIL, L'Orme des Merisiers Saint-Aubin, 91192 Gif-Sur-Yvette Cedex, France
| | - Amélie Juhin
- IMPMC, CNRS UMR 7590, Sorbonne Universités, MNHN, UPMC, IRD UMR 206, 75005 Paris, France
| | - Yinzhao Wang
- Paleomagnetism and Geochronology Laboratory, Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Beijing 100029, People's Republic of China France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
| | - Haitao Chen
- Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya 572000, People's Republic of China
| | - Oana Bunau
- IMPMC, CNRS UMR 7590, Sorbonne Universités, MNHN, UPMC, IRD UMR 206, 75005 Paris, France
| | - Edwige Otero
- Synchrotron SOLEIL, L'Orme des Merisiers Saint-Aubin, 91192 Gif-Sur-Yvette Cedex, France
| | - Philippe Ohresser
- Synchrotron SOLEIL, L'Orme des Merisiers Saint-Aubin, 91192 Gif-Sur-Yvette Cedex, France
| | - Yongxin Pan
- Paleomagnetism and Geochronology Laboratory, Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Beijing 100029, People's Republic of China France-China Biomineralization and Nano-structures Laboratory, Chinese Academy of Sciences, Beijing 100029, People's Republic of China
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193
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Baumgartner J, Menguy N, Gonzalez TP, Morin G, Widdrat M, Faivre D. Elongated magnetite nanoparticle formation from a solid ferrous precursor in a magnetotactic bacterium. J R Soc Interface 2017; 13:rsif.2016.0665. [PMID: 27881802 PMCID: PMC5134017 DOI: 10.1098/rsif.2016.0665] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2016] [Accepted: 10/27/2016] [Indexed: 11/23/2022] Open
Abstract
Magnetotactic bacteria are aquatic microorganisms that intracellularly mineralize ferrimagnetic nanoparticles enabling the cells to align with the geomagnetic field. The bacteria produce a magnetic mineral of species-specific phase (magnetite Fe(II)Fe(III)2O4 or greigite Fe(II)Fe(III)2S4), size, morphology and particle assembly. Several species produce crystals of unusual elongated particle shapes, which break the symmetry of the thermodynamically favoured isometric morphology. Such morphologies are thought to affect domain size and orientation of the internal magnetization. Therefore, they are interesting study objects to develop new synthetic strategies for the morphological control of nanoparticles. We investigate the formation of such irregularly shaped nanomagnets in the species Desulfovibrio magneticus RS-1. In contrast to previously described organisms, this bacterium accumulates iron predominantly as Fe(II) rather than Fe(III) consistent with an alternative oxidative biomineralization route. Further, using high-resolution electron microscopy, we observe an epitaxial relationship between precursor and the final mineral phase supporting the notion of a solid-state transformation pathway. The precursor is likely a green rust previously thought to convert to magnetite only by dissolution and re-precipitation. Our findings represent a novel observation in the interconversion of iron (oxyhydr)oxide materials and suggest that solid-state growth processes could be required to produce irregularly shaped, elongated magnetite nanocrystals.
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Affiliation(s)
- Jens Baumgartner
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, 14424 Potsdam, Germany
| | - Nicolas Menguy
- Institut de Minéralogie et de Physique des Milieux Condensés, Unité Mixte de Recherche 7590 Centre National de la Recherche Scientifique, Université Pierre et Marie Curie, Institut de Recherches pour le Développement, Campus Jussieu, 75005 Paris, France
| | - Teresa Perez Gonzalez
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, 14424 Potsdam, Germany
| | - Guillaume Morin
- Institut de Minéralogie et de Physique des Milieux Condensés, Unité Mixte de Recherche 7590 Centre National de la Recherche Scientifique, Université Pierre et Marie Curie, Institut de Recherches pour le Développement, Campus Jussieu, 75005 Paris, France
| | - Marc Widdrat
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, 14424 Potsdam, Germany
| | - Damien Faivre
- Department of Biomaterials, Max Planck Institute of Colloids and Interfaces, 14424 Potsdam, Germany
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194
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He K, Gilder SA, Orsi WD, Zhao X, Petersen N. Constant Flux of Spatial Niche Partitioning through High-Resolution Sampling of Magnetotactic Bacteria. Appl Environ Microbiol 2017; 83:e01382-17. [PMID: 28778897 PMCID: PMC5626982 DOI: 10.1128/aem.01382-17] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Accepted: 08/01/2017] [Indexed: 11/20/2022] Open
Abstract
Magnetotactic bacteria (MTB) swim along magnetic field lines in water. They are found in aquatic habitats throughout the world, yet knowledge of their spatial and temporal distribution remains limited. To help remedy this, we took MTB-bearing sediment from a natural pond, mixed the thoroughly homogenized sediment into two replicate aquaria, and then counted three dominant MTB morphotypes (coccus, spirillum, and rod-shaped MTB cells) at a high spatiotemporal sampling resolution: 36 discrete points in replicate aquaria were sampled every ∼30 days over 198 days. Population centers of the MTB coccus and MTB spirillum morphotypes moved in continual flux, yet they consistently inhabited separate locations, displaying significant anticorrelation. Rod-shaped MTB were initially concentrated toward the northern end of the aquaria, but at the end of the experiment, they were most densely populated toward the south. The finding that the total number of MTB cells increased over time during the experiment argues that population reorganization arose from relative changes in cell division and death and not from migration. The maximum net growth rates were 10, 3, and 1 doublings day-1 and average net growth rates were 0.24, 0.11, and 0.02 doublings day-1 for MTB cocci, MTB spirilla, and rod-shaped MTB, respectively; minimum growth rates for all three morphotypes were -0.03 doublings day-1 Our results suggest that MTB cocci and MTB spirilla occupy distinctly different niches: their horizontal positioning in sediment is anticorrelated and under constant flux.IMPORTANCE Little is known about the horizontal distribution of magnetotactic bacteria in sediment or how the distribution changes over time. We therefore measured three dominant magnetotactic bacterium morphotypes at 36 places in two replicate aquaria each month for 7 months. We found that the spatial positioning of population centers changed over time and that the two most abundant morphotypes (MTB cocci and MTB spirilla) occupied distinctly different niches in the aquaria. Maximum and average growth and death rates were quantified for each of the three morphotypes based on 72 sites that were measured six times. The findings provided novel insight into the differential behavior of noncultured magnetotactic bacteria.
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Affiliation(s)
- Kuang He
- Department of Earth and Environmental Sciences, Ludwig-Maximilians Universität, Munich, Germany
| | - Stuart A Gilder
- Department of Earth and Environmental Sciences, Ludwig-Maximilians Universität, Munich, Germany
| | - William D Orsi
- Department of Earth and Environmental Sciences, Ludwig-Maximilians Universität, Munich, Germany
- GeoBio-Center, Ludwig-Maximilians Universität, Munich, Germany
| | - Xiangyu Zhao
- National Institute of Polar Research, Tokyo, Japan
| | - Nikolai Petersen
- Department of Earth and Environmental Sciences, Ludwig-Maximilians Universität, Munich, Germany
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195
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Piraner DI, Farhadi A, Davis HC, Wu D, Maresca D, Szablowski JO, Shapiro MG. Going Deeper: Biomolecular Tools for Acoustic and Magnetic Imaging and Control of Cellular Function. Biochemistry 2017; 56:5202-5209. [PMID: 28782927 PMCID: PMC6058970 DOI: 10.1021/acs.biochem.7b00443] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Most cellular phenomena of interest to mammalian biology occur within the context of living tissues and organisms. However, today's most advanced tools for observing and manipulating cellular function, based on fluorescent or light-controlled proteins, work best in cultured cells, transparent model species, or small, surgically accessed anatomical regions. Their reach into deep tissues and larger animals is limited by photon scattering. To overcome this limitation, we must design biochemical tools that interface with more penetrant forms of energy. For example, sound waves and magnetic fields easily permeate most biological tissues, allowing the formation of images and delivery of energy for actuation. These capabilities are widely used in clinical techniques such as diagnostic ultrasound, magnetic resonance imaging, focused ultrasound ablation, and magnetic particle hyperthermia. Each of these modalities offers spatial and temporal precision that could be used to study a multitude of cellular processes in vivo. However, connecting these techniques to cellular functions such as gene expression, proliferation, migration, and signaling requires the development of new biochemical tools that can interact with sound waves and magnetic fields as optogenetic tools interact with photons. Here, we discuss the exciting challenges this poses for biomolecular engineering and provide examples of recent advances pointing the way to greater depth in in vivo cell biology.
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Affiliation(s)
- Dan I. Piraner
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| | - Arash Farhadi
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| | - Hunter C. Davis
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| | - Di Wu
- Division of Engineering and Applied Sciences, California Institute of Technology, Pasadena, CA 91125, USA
| | - David Maresca
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| | - Jerzy O. Szablowski
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| | - Mikhail G. Shapiro
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
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196
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Elimination of aflatoxin B1 in vegetable oil based on immuno-magnetosomes probes from a novel magnetotactic bacterium. Food Control 2017. [DOI: 10.1016/j.foodcont.2017.04.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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197
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Yang J, Kou Q, Liu Y, Wang D, Lu Z, Chen L, Zhang Y, Wang Y, Zhang Y, Han D, Xing SG. Effects of amount of benzyl ether and reaction time on the shape and magnetic properties of Fe3O4 nanocrystals. POWDER TECHNOL 2017. [DOI: 10.1016/j.powtec.2017.06.042] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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198
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Walsh TR, Knecht MR. Biointerface Structural Effects on the Properties and Applications of Bioinspired Peptide-Based Nanomaterials. Chem Rev 2017; 117:12641-12704. [DOI: 10.1021/acs.chemrev.7b00139] [Citation(s) in RCA: 132] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Tiffany R. Walsh
- Institute
for Frontier Materials, Deakin University, Geelong, Victoria 3216, Australia
| | - Marc R. Knecht
- Department
of Chemistry, University of Miami, 1301 Memorial Drive, Coral Gables, Florida 33146, United States
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199
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Lin W, Pan Y, Bazylinski DA. Diversity and ecology of and biomineralization by magnetotactic bacteria. ENVIRONMENTAL MICROBIOLOGY REPORTS 2017; 9:345-356. [PMID: 28557300 DOI: 10.1111/1758-2229.12550] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2017] [Revised: 05/20/2017] [Accepted: 05/21/2017] [Indexed: 06/07/2023]
Abstract
Magnetotactic bacteria (MTB) biomineralize intracellular, membrane-bounded crystals of magnetite (Fe3 O4 ) and/or greigite (Fe3 S4 ) called magnetosomes. MTB play important roles in the geochemical cycling of iron, sulfur, nitrogen and carbon. Significantly, they also represent an intriguing model system not just for the study of microbial biomineralization but also for magnetoreception, prokaryotic organelle formation and microbial biogeography. Here we review current knowledge on the ecology of and biomineralization by MTB, with an emphasis on more recent reports of unexpected ecological and phylogenetic findings regarding MTB. In this study, we conducted a search of public metagenomic databases and identified six novel magnetosome gene cluster-containing genomic fragments affiliated with the Deltaproteobacteria and Gammaproteobacteria classes of the Proteobacteria phylum, the Nitrospirae phylum and the Planctomycetes phylum from the deep subseafloor, marine oxygen minimum zone, groundwater biofilm and estuary sediment, thereby extending our knowledge on the diversity and distribution of MTB as well deriving important information as to their ecophysiology. We point out that the increasing availability of sequence data will facilitate researchers to systematically explore the ecology and biomineralization of MTB even further.
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Affiliation(s)
- Wei Lin
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing, 100029, China
- France-China Bio-Mineralization and Nano-Structures Laboratory, Chinese Academy of Sciences, Beijing, 100029, China
| | - Yongxin Pan
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, Beijing, 100029, China
- France-China Bio-Mineralization and Nano-Structures Laboratory, Chinese Academy of Sciences, Beijing, 100029, China
- College of Earth Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Dennis A Bazylinski
- School of Life Sciences, University of Nevada at Las Vegas, Las Vegas, NV, 89154-4004, USA
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200
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Microfluidic sorting of intrinsically magnetic cells under visual control. Sci Rep 2017; 7:6942. [PMID: 28761104 PMCID: PMC5537260 DOI: 10.1038/s41598-017-06946-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Accepted: 06/19/2017] [Indexed: 12/04/2022] Open
Abstract
Magnetic cell sorting provides a valuable complementary mechanism to fluorescent techniques, especially if its parameters can be fine-tuned. In addition, there has recently been growing interest in studying naturally occurring magnetic cells and genetic engineering of cells to render them magnetic in order to control molecular processes via magnetic fields. For such approaches, contamination-free magnetic separation is an essential capability. We here present a robust and tunable microfluidic sorting system in which magnetic gradients of up to 1700 T/m can be applied to cells flowing through a sorting channel by reversible magnetization of ferrofluids. Visual control of the sorting process allowed us to optimize sorting efficiencies for a large range of sizes and magnetic moments of cells. Using automated quantification based on imaging of fluorescent markers, we showed that macrophages containing phagocytosed magnetic nanoparticles, with cellular magnetic dipole moments on the order of 10 fAm2, could be sorted with an efficiency of 90 ± 1%. Furthermore, we successfully sorted intrinsically magnetic magnetotactic bacteria with magnetic moments of 0.1 fAm2. In distinction to column-based magnetic sorting devices, microfluidic systems can prevent sample contact with superparamagnetic material. This ensures contamination-free separation of naturally occurring or bioengineered magnetic cells and is essential for downstream characterization of their properties.
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