201
|
Su CC, Yu Y, Chang PC, Chen YW, Chen IY, Lee YY, Wang CC. VUV Photoelectron Spectroscopy of Cysteine Aqueous Aerosols: A Microscopic View of Its Nucleophilicity at Varying pH Conditions. J Phys Chem Lett 2015; 6:817-23. [PMID: 26262658 DOI: 10.1021/acs.jpclett.5b00002] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Cysteine (Cys) is unique due to its highly reactive thiol group. It often regulates the biological function of proteins by acting as the redox site. Despite its biological significance, however, the valence electronic structure of Cys under the aqueous environments remains unavailable. Here, we report the VUV photoelectron spectroscopy of Cys aqueous aerosols via a newly built aerosol VUV photoelectron spectroscopy apparatus. The photoelectron spectra of Cys show distinct band shapes at varying pH conditions, reflecting the altered molecular orbital characters when its dominating form changes. The ionization energy of Cys is determined to be 8.98 ± 0.05 eV at low pH. A new feature at a binding energy of 6.97 ± 0.05 eV is observed at high pH, suggesting that the negative charge on the thiolate group becomes the first electron to be removed upon ionization. This work implies that when Cys is involved in redox processes, the charge transfer mechanism may be entirely altered under different pH conditions.
Collapse
Affiliation(s)
- Chien-Cheng Su
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| | - Youqing Yu
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| | - Po-Chiao Chang
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| | - Yu-Wei Chen
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| | - I-Ying Chen
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| | - Yin-Yu Lee
- ‡National Synchrotron Radiation Research Center, 30076 Hsinchu, Taiwan, Republic of China
| | - Chia C Wang
- †Department of Chemistry, National Sun Yat-sen University, 80424 Kaohsiung, Taiwan, Republic of China
| |
Collapse
|
202
|
Toyoshima R, Kondoh H. In-situ observations of catalytic surface reactions with soft x-rays under working conditions. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2015; 27:083003. [PMID: 25667354 DOI: 10.1088/0953-8984/27/8/083003] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Catalytic chemical reactions proceeding on solid surfaces are an important topic in fundamental science and industrial technologies such as energy conversion, pollution control and chemical synthesis. Complete understanding of the heterogeneous catalysis and improving its efficiency to an ultimate level are the eventual goals for many surface scientists. Soft x-ray is one of the prime probes to observe electronic and structural information of the target materials. Most studies in surface science using soft x-rays have been performed under ultra-high vacuum conditions due to the technical limitation, though the practical catalytic reactions proceed under ambient pressure conditions. However, recent developments of soft x-ray based techniques operating under ambient pressure conditions have opened a door to the in-situ observation of materials under realistic environments. The near-ambient-pressure x-ray photoelectron spectroscopy (NAP-XPS) using synchrotron radiation enables us to observe the chemical states of surfaces of condensed matters under the presence of gas(es) at elevated pressures, which has been hardly conducted with the conventional XPS technique. Furthermore, not only the NAP-XPS but also ambient-pressure compatible soft x-ray core-level spectroscopies, such as near-edge absorption fine structure (NEXAFS) and x-ray emission spectroscopy (XES), have been significantly contributing to the in-situ observations. In this review, first we introduce recent developments of in-situ observations using soft x-ray techniques and current status. Then we present recent new findings on catalytically active surfaces using soft x-ray techniques, particularly focusing on the NAP-XPS technique. Finally we give a perspective on the future direction of this emerging technique.
Collapse
|
203
|
|
204
|
Competition between Organics and Bromide at the Aqueous Solution–Air Interface as Seen from Ozone Uptake Kinetics and X-ray Photoelectron Spectroscopy. J Phys Chem A 2015; 119:4600-8. [DOI: 10.1021/jp510707s] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
205
|
Walz MM, Caleman C, Werner J, Ekholm V, Lundberg D, Prisle NL, Öhrwall G, Björneholm O. Surface behavior of amphiphiles in aqueous solution: a comparison between different pentanol isomers. Phys Chem Chem Phys 2015; 17:14036-44. [DOI: 10.1039/c5cp01870f] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular-level understanding of concentration-dependent changes in the surface structure of different amphiphilic isomers at the water–vapor interface was gained by molecular dynamics (MD) simulation and X-ray photoelectron spectroscopy (XPS).
Collapse
Affiliation(s)
- M.-M. Walz
- Uppsala University
- Department of Physics and Astronomy
- 75120 Uppsala
- Sweden
| | - C. Caleman
- Uppsala University
- Department of Physics and Astronomy
- 75120 Uppsala
- Sweden
- Center for Free-Electron Laser Science
| | - J. Werner
- Uppsala University
- Department of Physics and Astronomy
- 75120 Uppsala
- Sweden
- Swedish University of Agricultural Sciences
| | - V. Ekholm
- Uppsala University
- Department of Physics and Astronomy
- 75120 Uppsala
- Sweden
| | - D. Lundberg
- Swedish University of Agricultural Sciences
- Department of Chemistry and Biotechnology
- 75007 Uppsala
- Sweden
| | - N. L. Prisle
- Department of Physics
- Helsinki University
- 00014 Helsinki
- Finland
| | - G. Öhrwall
- MAX IV Laboratory
- Lund University
- 22100 Lund
- Sweden
| | - O. Björneholm
- Uppsala University
- Department of Physics and Astronomy
- 75120 Uppsala
- Sweden
| |
Collapse
|
206
|
Kothe A, Wilke M, Moguilevski A, Engel N, Winter B, Kiyan IY, Aziz EF. Charge transfer to solvent dynamics in iodide aqueous solution studied at ionization threshold. Phys Chem Chem Phys 2015; 17:1918-24. [DOI: 10.1039/c4cp02482f] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The population of charge-transfer-to-solvent states in iodide aqueous solution can undergo via non-resonant multiphoton electronic excitation above the vacuum level.
Collapse
Affiliation(s)
- Alexander Kothe
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Martin Wilke
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Alexandre Moguilevski
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Nicholas Engel
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Bernd Winter
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Igor Yu. Kiyan
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| | - Emad F. Aziz
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq)
- Institute of Methods for Material Development
- Helmholtz-Zentrum Berlin
- D-12489 Berlin
- Germany
| |
Collapse
|
207
|
Fang C, Li WF, Koster RS, Klimeš J, van Blaaderen A, van Huis MA. The accurate calculation of the band gap of liquid water by means of GW corrections applied to plane-wave density functional theory molecular dynamics simulations. Phys Chem Chem Phys 2015; 17:365-75. [DOI: 10.1039/c4cp04202f] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Knowledge about the intrinsic electronic properties of water is imperative for understanding the behaviour of aqueous solutions that are used throughout biology, chemistry, physics, and industry.
Collapse
Affiliation(s)
- Changming Fang
- Debye Institute for Nanomaterials Science and Center for Extreme Matter and Emergent Phenomena
- Utrecht University
- 3584 CC Utrecht
- The Netherlands
| | - Wun-Fan Li
- Debye Institute for Nanomaterials Science and Center for Extreme Matter and Emergent Phenomena
- Utrecht University
- 3584 CC Utrecht
- The Netherlands
| | - Rik S. Koster
- Debye Institute for Nanomaterials Science and Center for Extreme Matter and Emergent Phenomena
- Utrecht University
- 3584 CC Utrecht
- The Netherlands
| | - Jiří Klimeš
- University of Vienna
- Faculty of Physics and Center for Computational Materials Science
- A-1090 Vienna
- Austria
| | - Alfons van Blaaderen
- Debye Institute for Nanomaterials Science and Center for Extreme Matter and Emergent Phenomena
- Utrecht University
- 3584 CC Utrecht
- The Netherlands
| | - Marijn A. van Huis
- Debye Institute for Nanomaterials Science and Center for Extreme Matter and Emergent Phenomena
- Utrecht University
- 3584 CC Utrecht
- The Netherlands
| |
Collapse
|
208
|
Men S, Lovelock KRJ, Licence P. Directly probing the effect of the solvent on a catalyst electronic environment using X-ray photoelectron spectroscopy. RSC Adv 2015. [DOI: 10.1039/c5ra04662a] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The anion of an ionic liquid can significantly influence the electronic environment of a metal centre, and thus impact upon reaction performance in a model Suzuki cross coupling reaction.
Collapse
Affiliation(s)
- Shuang Men
- Shenyang Ligong University
- School of Material Science and Engineering
- Shenyang
- China
- The University of Nottingham
| | | | - Peter Licence
- The University of Nottingham
- School of Chemistry
- Nottingham
- United Kingdom
| |
Collapse
|
209
|
Shi H, Lercher JA, Yu XY. Sailing into uncharted waters: recent advances in the in situ monitoring of catalytic processes in aqueous environments. Catal Sci Technol 2015. [DOI: 10.1039/c4cy01720j] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review presents recent advances inin situstudies of catalytic processes in the aqueous environment with an outlook of mesoscale imaging.
Collapse
Affiliation(s)
- Hui Shi
- Fundamental and Computer Sciences Directorate
- Pacific Northwest National Laboratory (PNNL)
- Richland
- USA
| | - Johannes A. Lercher
- Fundamental and Computer Sciences Directorate
- Pacific Northwest National Laboratory (PNNL)
- Richland
- USA
- Department of Chemistry
| | - Xiao-Ying Yu
- Fundamental and Computer Sciences Directorate
- Pacific Northwest National Laboratory (PNNL)
- Richland
- USA
| |
Collapse
|
210
|
Schroeder CA, Pluhařová E, Seidel R, Schroeder WP, Faubel M, Slavíček P, Winter B, Jungwirth P, Bradforth SE. Oxidation half-reaction of aqueous nucleosides and nucleotides via photoelectron spectroscopy augmented by ab initio calculations. J Am Chem Soc 2014; 137:201-9. [PMID: 25551179 DOI: 10.1021/ja508149e] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Oxidative damage to DNA and hole transport between nucleobases in oxidized DNA are important processes in lesion formation for which surprisingly poor thermodynamic data exist, the relative ease of oxidizing the four nucleobases being one such example. Theoretical simulations of radiation damage and charge transport in DNA depend on accurate values for vertical ionization energies (VIEs), reorganization energies, and standard reduction potentials. Liquid-jet photoelectron spectroscopy can be used to directly study the oxidation half-reaction. The VIEs of nucleic acid building blocks are measured in their native buffered aqueous environment. The experimental investigation of purine and pyrimidine nucleotides, nucleosides, pentose sugars, and inorganic phosphate demonstrates that photoelectron spectra of nucleotides arise as a spectral sum over their individual chemical components; that is, the electronic interactions between each component are effectively screened from one another by water. Electronic structure theory affords the assignment of the lowest energy photoelectron band in all investigated nucleosides and nucleotides to a single ionizing transition centered solely on the nucleobase. Thus, combining the measured VIEs with theoretically determined reorganization energies allows for the spectroscopic determination of the one-electron redox potentials that have been difficult to establish via electrochemistry.
Collapse
Affiliation(s)
- Christi A Schroeder
- Department of Chemistry, University of Southern California , Los Angeles, California 90089-0482, United States
| | | | | | | | | | | | | | | | | |
Collapse
|
211
|
Slavíček P, Winter B, Cederbaum LS, Kryzhevoi NV. Proton-Transfer Mediated Enhancement of Nonlocal Electronic Relaxation Processes in X-ray Irradiated Liquid Water. J Am Chem Soc 2014; 136:18170-6. [DOI: 10.1021/ja5117588] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Petr Slavíček
- Department
of Physical Chemistry, Institute of Chemical Technology, Technická
5, 16628 Prague, Czech Republic
| | - Bernd Winter
- Joint
Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq), Helmholtz-Zentrum Berlin für Matrialien und Energie, Albert-Einstein-Strasse
15, D-12489 Berlin, Germany
| | - Lorenz S. Cederbaum
- Theoretical
Chemistry, Institute of Physical Chemistry, University of Heidelberg, Im Neuenheimer Feld 229, D-69120 Heidelberg, Germany
| | - Nikolai V. Kryzhevoi
- Theoretical
Chemistry, Institute of Physical Chemistry, University of Heidelberg, Im Neuenheimer Feld 229, D-69120 Heidelberg, Germany
| |
Collapse
|
212
|
Tentscher PR, Seidel R, Winter B, Guerard JJ, Arey JS. Exploring the aqueous vertical ionization of organic molecules by molecular simulation and liquid microjet photoelectron spectroscopy. J Phys Chem B 2014; 119:238-56. [PMID: 25516011 DOI: 10.1021/jp508053m] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
To study the influence of aqueous solvent on the electronic energy levels of dissolved organic molecules, we conducted liquid microjet photoelectron spectroscopy (PES) measurements of the aqueous vertical ionization energies (VIEaq) of aniline (7.49 eV), veratrole alcohol (7.68 eV), and imidazole (8.51 eV). We also reanalyzed previously reported experimental PES data for phenol, phenolate, thymidine, and protonated imidazolium cation. We then simulated PE spectra by means of QM/MM molecular dynamics and EOM-IP-CCSD calculations with effective fragment potentials, used to describe the aqueous vertical ionization energies for six molecules, including aniline, phenol, veratrole alcohol, imidazole, methoxybenzene, and dimethylsulfide. Experimental and computational data enable us to decompose the VIEaq into elementary processes. For neutral compounds, the shift in VIE upon solvation, ΔVIEaq, was found to range from ≈-0.5 to -0.91 eV. The ΔVIEaq was further explained in terms of the influence of deforming the gas phase solute into its solution phase conformation, the influence of solute hydrogen-bond donor and acceptor interactions with proximate solvent molecules, and the polarization of about 3000 outerlying solvent molecules. Among the neutral compounds, variability in ΔVIEaq appeared largely controlled by differences in solute-solvent hydrogen-bonding interactions. Detailed computational analysis of the flexible molecule veratrole alcohol reveals that the VIE is strongly dependent on molecular conformation in both gas and aqueous phases. Finally, aqueous reorganization energies of the oxidation half-cell ionization reaction were determined from experimental data or estimated from simulation for the six compounds aniline, phenol, phenolate, veratrole alcohol, dimethylsulfide, and methoxybenzene, revealing a surprising constancy of 2.06 to 2.35 eV.
Collapse
Affiliation(s)
- Peter R Tentscher
- Environmental Chemistry Modeling Laboratory, GR C2 544, Ecole Polytechnique Fédérale de Lausanne , Station 2, CH-1015 Lausanne, Switzerland
| | | | | | | | | |
Collapse
|
213
|
Jeyachandran YL, Meyer F, Nagarajan S, Benkert A, Bär M, Blum M, Yang W, Reinert F, Heske C, Weinhardt L, Zharnikov M. Ion-Solvation-Induced Molecular Reorganization in Liquid Water Probed by Resonant Inelastic Soft X-ray Scattering. J Phys Chem Lett 2014; 5:4143-4148. [PMID: 26278946 DOI: 10.1021/jz502186a] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The molecular structure of liquid water is susceptible to changes upon admixture of salts due to ionic solvation, which provides the basis of many chemical and biochemical processes. Here we demonstrate how the local electronic structure of aqueous potassium chloride (KCl) solutions can be studied by resonant inelastic soft X-ray scattering (RIXS) to monitor the effects of the ion solvation on the hydrogen-bond (HB) network of liquid water. Significant changes in the oxygen K-edge emission spectra are observed with increasing KCl concentration. These changes can be attributed to modifications in the proton dynamics, caused by a specific coordination structure around the salt ions. Analysis of the spectator decay spectra reveals a spectral signature that could be characteristic of this structure.
Collapse
Affiliation(s)
- Yekkoni L Jeyachandran
- †Angewandte Physikalische Chemie, Universität Heidelberg, Im Neuenheimer Feld 253, 69120 Heidelberg, Germany
| | - Frank Meyer
- ‡Experimentelle Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
| | - Sankaranarayanan Nagarajan
- †Angewandte Physikalische Chemie, Universität Heidelberg, Im Neuenheimer Feld 253, 69120 Heidelberg, Germany
| | - Andreas Benkert
- ‡Experimentelle Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
- §Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology (KIT), Hermann-v.-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Marcus Bär
- ∥Solar Energy Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Hahn-Meitner-Platz 1, 14109 Berlin, Germany
- ⊥Institut für Physik und Chemie, Brandenburgische Technische Universität Cottbus-Senftenberg, Platz der Deutschen Einheit 1, 03046 Cottbus, Germany
- #Department of Chemistry, University of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
| | - Monika Blum
- #Department of Chemistry, University of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
| | - Wanli Yang
- ∇Advanced Light Source, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California 94720, United States
| | - Friedrich Reinert
- ‡Experimentelle Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
| | - Clemens Heske
- §Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology (KIT), Hermann-v.-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- #Department of Chemistry, University of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- ○ANKA Synchrotron Radiation Facility, Karlsruhe Institute of Technology (KIT), Hermann-v.-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- ◆Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology (KIT), Engesserstrasse 18/20, 76128 Karlsruhe, Germany
| | - Lothar Weinhardt
- §Institute for Photon Science and Synchrotron Radiation, Karlsruhe Institute of Technology (KIT), Hermann-v.-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- #Department of Chemistry, University of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- ○ANKA Synchrotron Radiation Facility, Karlsruhe Institute of Technology (KIT), Hermann-v.-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- ◆Institute for Chemical Technology and Polymer Chemistry, Karlsruhe Institute of Technology (KIT), Engesserstrasse 18/20, 76128 Karlsruhe, Germany
| | - Michael Zharnikov
- †Angewandte Physikalische Chemie, Universität Heidelberg, Im Neuenheimer Feld 253, 69120 Heidelberg, Germany
| |
Collapse
|
214
|
Abstract
Solvated electrons were first discovered in solutions of metals in liquid ammonia. The physical and chemical properties of these species have been studied extensively for many decades using an arsenal of electrochemical, spectroscopic, and theoretical techniques. Yet, in contrast to their hydrated counterpart, the ultrafast dynamics of ammoniated electrons remained completely unexplored until quite recently. Femtosecond pump-probe spectroscopy on metal-ammonia solutions and femtosecond multiphoton ionization spectroscopy on the neat ammonia solvent have provided new insights into the optical properties and the reactivities of this fascinating species. This article reviews the nature of the optical transition, which gives the metal-ammonia solutions their characteristic blue appearance, in terms of ultrafast relaxation processes involving bound and continuum excited states. The recombination processes following the injection of an electron via photoionization of the solvent are discussed in the context of the electronic structure of the liquid and the anionic defect associated with the solvated electron.
Collapse
Affiliation(s)
- Peter Vöhringer
- Institut für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms-Universität, 53115 Bonn, Germany;
| |
Collapse
|
215
|
Liu X, Cheng J, Sprik M. Aqueous Transition-Metal Cations as Impurities in a Wide Gap Oxide: The Cu2+/Cu+ and Ag2+/Ag+ Redox Couples Revisited. J Phys Chem B 2014; 119:1152-63. [DOI: 10.1021/jp506691h] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Xiandong Liu
- Department
of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
- State Key Laboratory
for Mineral Deposits Research, School of Earth Sciences and Engineering, Nanjing University, Nanjing 210093, People’s Republic of China
| | - Jun Cheng
- Department
of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
- Department
of Chemistry, University of Aberdeen, Aberdeen AB24 3UE, United Kingdom
| | - Michiel Sprik
- Department
of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| |
Collapse
|
216
|
Palivec V, Pluhařová E, Unger I, Winter B, Jungwirth P. DNA lesion can facilitate base ionization: vertical ionization energies of aqueous 8-oxoguanine and its nucleoside and nucleotide. J Phys Chem B 2014; 118:13833-7. [PMID: 25390766 DOI: 10.1021/jp5111086] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
8-Oxoguanine is one of the key products of indirect radiation damage to DNA by reactive oxygen species. Here, we describe ionization of this damaged nucleobase and the corresponding nucleoside and nucleotide in aqueous phase, modeled by the nonequilibrium polarizable continuum model, establishing their lowest vertical ionization energies of 6.8-7.0 eV. We thus confirm that 8-oxoguanine has even lower ionization energy than the parental guanine, which is the canonical nucleobase with the lowest ionization energy. Therefore, it can act as a trap for the cationic hole formed by ionizing radiation and thus protect DNA from further radiation damage. We also model using time-dependent density functional theory and measure by liquid jet photoelectron spectroscopy the valence photoelectron spectrum of 8-oxoguanine in water. We show that the calculated higher lying ionization states match well the experiment which, however, is not sensitive enough to capture the electron signal corresponding to the lowest ionization process due to the low solubility of 8-oxoguanine in water.
Collapse
Affiliation(s)
- Vladimír Palivec
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic , Flemingovo nam. 2, 16610 Prague 6, Czech Republic
| | | | | | | | | |
Collapse
|
217
|
|
218
|
Feng RR, Guo Y, Wang HF. Reorientation of the “free OH” group in the top-most layer of air/water interface of sodium fluoride aqueous solution probed with sum-frequency generation vibrational spectroscopy. J Chem Phys 2014; 141:18C507. [PMID: 25399172 DOI: 10.1063/1.4895561] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Affiliation(s)
- Ran-Ran Feng
- International Center for Quantum Materials, Peking University, Beijing 100871, People's Republic of China
| | - Yuan Guo
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100190, China
| | - Hong-Fei Wang
- William R. Wiley Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, 902 Battelle Boulevard, P.O. Box 999, Richland, Washington 99352, USA
| |
Collapse
|
219
|
Löytynoja T, Niskanen J, Jänkälä K, Vahtras O, Rinkevicius Z, Ågren H. Quantum Mechanics/Molecular Mechanics Modeling of Photoelectron Spectra: The Carbon 1s Core–Electron Binding Energies of Ethanol–Water Solutions. J Phys Chem B 2014; 118:13217-25. [DOI: 10.1021/jp506410w] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- T. Löytynoja
- Department
of Physics, University of Oulu, P.O. Box 3000, FI-90014 University of Oulu, Finland
- Division of Theoretical Chemistry & Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - J. Niskanen
- Department
of Physics, University of Helsinki, P.O. Box 64, FI-00014 University of Helsinki, Finland
| | - K. Jänkälä
- Department
of Physics, University of Oulu, P.O. Box 3000, FI-90014 University of Oulu, Finland
| | - O. Vahtras
- Division of Theoretical Chemistry & Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| | - Z. Rinkevicius
- Division of Theoretical Chemistry & Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
- Swedish
e-Science Research Centre (SeRC), KTH Royal Institute of Technology, S-100 44 Stockholm, Sweden
| | - H. Ågren
- Division of Theoretical Chemistry & Biology, School of Biotechnology, Royal Institute of Technology, S-106 91 Stockholm, Sweden
| |
Collapse
|
220
|
Kraus J, Reichelt R, Günther S, Gregoratti L, Amati M, Kiskinova M, Yulaev A, Vlassiouk I, Kolmakov A. Photoelectron spectroscopy of wet and gaseous samples through graphene membranes. NANOSCALE 2014; 6:14394-403. [PMID: 25333337 DOI: 10.1039/c4nr03561e] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Photoelectron spectroscopy (PES) and microscopy are highly important for exploring morphologically and chemically complex liquid-gas, solid-liquid and solid-gas interfaces under realistic conditions, but the very small electron mean free path inside dense media imposes serious experimental challenges. Currently, near ambient pressure PES is conducted using dexterously designed electron energy analyzers coupled with differentially pumped electron lenses which make it possible to conduct PES measurements at a few hPa. This report proposes an alternative ambient pressure approach that can be applied to a broad class of samples and be implemented in conventional PES instruments. It uses ultrathin electron transparent but molecular impermeable membranes to isolate the high pressure sample environment from the high vacuum PES detection system. We demonstrate that the separating graphene membrane windows are both mechanically robust and sufficiently transparent for electrons in a wide energy range to allow soft X-ray PES of liquid and gaseous water. The performed proof-of-principle experiments confirm the possibility to probe vacuum-incompatible toxic or reactive samples placed inside such hermetic, gas flow or fluidic environmental cells.
Collapse
Affiliation(s)
- Jürgen Kraus
- Technische Universität München, Chemie Department, Lichtenbergstr. 4, D-85748 Garching, Germany
| | | | | | | | | | | | | | | | | |
Collapse
|
221
|
Arrell CA, Ojeda J, Sabbar M, Okell WA, Witting T, Siegel T, Diveki Z, Hutchinson S, Gallmann L, Keller U, van Mourik F, Chapman RT, Cacho C, Rodrigues N, Turcu ICE, Tisch JWG, Springate E, Marangos JP, Chergui M. A simple electron time-of-flight spectrometer for ultrafast vacuum ultraviolet photoelectron spectroscopy of liquid solutions. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2014; 85:103117. [PMID: 25362381 DOI: 10.1063/1.4899062] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
We present a simple electron time of flight spectrometer for time resolved photoelectron spectroscopy of liquid samples using a vacuum ultraviolet (VUV) source produced by high-harmonic generation. The field free spectrometer coupled with the time-preserving monochromator for the VUV at the Artemis facility of the Rutherford Appleton Laboratory achieves an energy resolution of 0.65 eV at 40 eV with a sub 100 fs temporal resolution. A key feature of the design is a differentially pumped drift tube allowing a microliquid jet to be aligned and started at ambient atmosphere while preserving a pressure of 10(-1) mbar at the micro channel plate detector. The pumping requirements for photoelectron (PE) spectroscopy in vacuum are presented, while the instrument performance is demonstrated with PE spectra of salt solutions in water. The capability of the instrument for time resolved measurements is demonstrated by observing the ultrafast (50 fs) vibrational excitation of water leading to temporary proton transfer.
Collapse
Affiliation(s)
- C A Arrell
- Laboratory of Ultrafast Spectroscopy, ISIC, Station 6, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| | - J Ojeda
- Laboratory of Ultrafast Spectroscopy, ISIC, Station 6, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| | - M Sabbar
- Physics Department, ETH Zurich, 8093 Zurich, Switzerland
| | - W A Okell
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - T Witting
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - T Siegel
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - Z Diveki
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - S Hutchinson
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - L Gallmann
- Physics Department, ETH Zurich, 8093 Zurich, Switzerland
| | - U Keller
- Physics Department, ETH Zurich, 8093 Zurich, Switzerland
| | - F van Mourik
- Laboratory of Ultrafast Spectroscopy, ISIC, Station 6, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| | - R T Chapman
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Oxon OX11 0QX, United Kingdom
| | - C Cacho
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Oxon OX11 0QX, United Kingdom
| | - N Rodrigues
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Oxon OX11 0QX, United Kingdom
| | - I C E Turcu
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Oxon OX11 0QX, United Kingdom
| | - J W G Tisch
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - E Springate
- Central Laser Facility, STFC Rutherford Appleton Laboratory, Oxon OX11 0QX, United Kingdom
| | - J P Marangos
- Department of Physics, The Blackett Laboratory, Imperial College, London SW7 2AZ, United Kingdom
| | - M Chergui
- Laboratory of Ultrafast Spectroscopy, ISIC, Station 6, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| |
Collapse
|
222
|
Affiliation(s)
- Majed Chergui
- Ecole Polytechnique Fédérale de Lausanne, Laboratoire de Spectroscopie Ultrarapide, ISIC, FSB, Station 6, CH-1015 Lausanne, Switzerland.
| |
Collapse
|
223
|
Opalka D, Pham TA, Sprik M, Galli G. The ionization potential of aqueous hydroxide computed using many-body perturbation theory. J Chem Phys 2014; 141:034501. [DOI: 10.1063/1.4887259] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Daniel Opalka
- Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Tuan Anh Pham
- Department of Chemistry, University of California, Davis, California 95616, USA
- Lawrence Livermore National Laboratory, Livermore, California 94551, USA
| | - Michiel Sprik
- Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Giulia Galli
- The Institute for Molecular Engineering, University of Chicago, Chicago, Illinois 60637, USA
| |
Collapse
|
224
|
Eriksson SK, Hahlin M, Kahk JM, Villar-Garcia IJ, Webb MJ, Grennberg H, Yakimova R, Rensmo H, Edström K, Hagfeldt A, Siegbahn H, Edwards MOM, Karlsson PG, Backlund K, Åhlund J, Payne DJ. A versatile photoelectron spectrometer for pressures up to 30 mbar. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2014; 85:075119. [PMID: 25085185 DOI: 10.1063/1.4890665] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
High-pressure photoelectron spectroscopy is a rapidly developing technique with applications in a wide range of fields ranging from fundamental surface science and catalysis to energy materials, environmental science, and biology. At present the majority of the high-pressure photoelectron spectrometers are situated at synchrotron end stations, but recently a small number of laboratory-based setups have also emerged. In this paper we discuss the design and performance of a new laboratory based high pressure photoelectron spectrometer equipped with an Al Kα X-ray anode and a hemispherical electron energy analyzer combined with a differentially pumped electrostatic lens. The instrument is demonstrated to be capable of measuring core level spectra at pressures up to 30 mbar. Moreover, valence band spectra of a silver sample as well as a carbon-coated surface (graphene) recorded under a 2 mbar nitrogen atmosphere are presented, demonstrating the versatility of this laboratory-based spectrometer.
Collapse
Affiliation(s)
- Susanna K Eriksson
- Department of Chemistry-Ångström, Uppsala University, Box 523, 751 20 Uppsala, Sweden
| | - Maria Hahlin
- Department of Physics and Astronomy, Uppsala University, Box 516, 751 20 Uppsala, Sweden
| | - Juhan Matthias Kahk
- Department of Materials, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
| | - Ignacio J Villar-Garcia
- Department of Materials, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
| | - Matthew J Webb
- Department of Chemistry-BMC, Uppsala University, Box 576, 75123 Uppsala, Sweden
| | - Helena Grennberg
- Department of Chemistry-BMC, Uppsala University, Box 576, 75123 Uppsala, Sweden
| | - Rositza Yakimova
- Department of Physics, Chemistry, and Biology, Linköping University, SE-581 83 Linköping, Sweden
| | - Håkan Rensmo
- Department of Physics and Astronomy, Uppsala University, Box 516, 751 20 Uppsala, Sweden
| | - Kristina Edström
- Department of Chemistry-Ångström, Uppsala University, Box 523, 751 20 Uppsala, Sweden
| | - Anders Hagfeldt
- Department of Chemistry-Ångström, Uppsala University, Box 523, 751 20 Uppsala, Sweden
| | - Hans Siegbahn
- Department of Physics and Astronomy, Uppsala University, Box 516, 751 20 Uppsala, Sweden
| | | | | | | | - John Åhlund
- VG Scienta AB, Box 15120, 750 15 Uppsala, Sweden
| | - David J Payne
- Department of Materials, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
| |
Collapse
|
225
|
Suzuki YI, Nishizawa K, Kurahashi N, Suzuki T. Effective attenuation length of an electron in liquid water between 10 and 600 eV. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:010302. [PMID: 25122237 DOI: 10.1103/physreve.90.010302] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2013] [Indexed: 05/03/2023]
Abstract
The absolute values of the effective attenuation length of an electron in liquid water are determined using soft x-ray O1s photoemission spectroscopy of a liquid beam of water without employing any theoretical estimation or computationally obtained value. The effective attenuation length is greater than 1 nm in the entire electron kinetic energy region and exhibits very flat energy dependence in the 10-100 eV region.
Collapse
Affiliation(s)
- Yoshi-Ichi Suzuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | | | - Naoya Kurahashi
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Toshinori Suzuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan and RIKEN Center for Advanced Photonics, RIKEN, Wako 351-0198, Japan
| |
Collapse
|
226
|
Lam RK, Shih O, Smith JW, Sheardy AT, Rizzuto AM, Prendergast D, Saykally RJ. Electrokinetic detection for X-ray spectra of weakly interacting liquids: n-decane and n-nonane. J Chem Phys 2014; 140:234202. [DOI: 10.1063/1.4882901] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
|
227
|
Werner J, Wernersson E, Ekholm V, Ottosson N, Öhrwall G, Heyda J, Persson I, Söderström J, Jungwirth P, Björneholm O. Surface Behavior of Hydrated Guanidinium and Ammonium Ions: A Comparative Study by Photoelectron Spectroscopy and Molecular Dynamics. J Phys Chem B 2014; 118:7119-27. [DOI: 10.1021/jp500867w] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Josephina Werner
- Department
of Physics and Astronomy, Uppsala University, P.O. Box 516, SE-751 20 Uppsala, Sweden
- Department
of Chemistry and Biotechnology, Swedish University of Agricultural Sciences,
P.O. Box 7015, SE-750 07 Uppsala, Sweden
| | - Erik Wernersson
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague 6, Czech Republic
| | - Victor Ekholm
- Department
of Physics and Astronomy, Uppsala University, P.O. Box 516, SE-751 20 Uppsala, Sweden
| | - Niklas Ottosson
- Department
of Physics and Astronomy, Uppsala University, P.O. Box 516, SE-751 20 Uppsala, Sweden
| | - Gunnar Öhrwall
- MAX
IV Laboratory, Lund University, P.O. Box 118, SE-221 00 Lund, Sweden
| | - Jan Heyda
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague 6, Czech Republic
| | - Ingmar Persson
- Department
of Chemistry and Biotechnology, Swedish University of Agricultural Sciences,
P.O. Box 7015, SE-750 07 Uppsala, Sweden
| | - Johan Söderström
- Department
of Physics and Astronomy, Uppsala University, P.O. Box 516, SE-751 20 Uppsala, Sweden
| | - Pavel Jungwirth
- Institute
of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, CZ-16610 Prague 6, Czech Republic
| | - Olle Björneholm
- Department
of Physics and Astronomy, Uppsala University, P.O. Box 516, SE-751 20 Uppsala, Sweden
| |
Collapse
|
228
|
Yepes D, Seidel R, Winter B, Blumberger J, Jaque P. Photoemission Spectra and Density Functional Theory Calculations of 3d Transition Metal–Aqua Complexes (Ti–Cu) in Aqueous Solution. J Phys Chem B 2014; 118:6850-63. [DOI: 10.1021/jp5012389] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Diana Yepes
- Departamento
de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, Avenida Republica 275, Santiago 8370146, Chile
| | - Robert Seidel
- Department
of Chemistry, University of Southern California, 920 Bloom Walk, Los Angeles, California 90089, United States
| | - Bernd Winter
- Joint
Laboratory for Ultrafast Dynamics in Solutions and at Interfaces (JULiq), Helmholtz−Zentrum Berlin für Materialien und Energie, and BESSY II, Albert−Einstein−Strasse 15, D-12489 Berlin, Germany
| | - Jochen Blumberger
- Department
of Physics and Astronomy, University College London, London WC1E6BT, United Kingdom
| | - Pablo Jaque
- Departamento
de Ciencias Químicas, Facultad de Ciencias Exactas, Universidad Andres Bello, Avenida Republica 275, Santiago 8370146, Chile
| |
Collapse
|
229
|
Opalka D, Sprik M. Solute–Solvent Charge-Transfer Excitations and Optical Absorption of Hydrated Hydroxide from Time-Dependent Density-Functional Theory. J Chem Theory Comput 2014; 10:2465-70. [DOI: 10.1021/ct5002889] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Daniel Opalka
- Department
of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Michiel Sprik
- Department
of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| |
Collapse
|
230
|
Hua W, Verreault D, Huang Z, Adams EM, Allen HC. Cation Effects on Interfacial Water Organization of Aqueous Chloride Solutions. I. Monovalent Cations: Li+, Na+, K+, and NH4+. J Phys Chem B 2014; 118:8433-40. [PMID: 24798506 DOI: 10.1021/jp503132m] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Wei Hua
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Dominique Verreault
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Zishuai Huang
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Ellen M. Adams
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Heather C. Allen
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| |
Collapse
|
231
|
Ishiyama T, Imamura T, Morita A. Theoretical Studies of Structures and Vibrational Sum Frequency Generation Spectra at Aqueous Interfaces. Chem Rev 2014; 114:8447-70. [DOI: 10.1021/cr4004133] [Citation(s) in RCA: 110] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Tatsuya Ishiyama
- Department
of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Takako Imamura
- Department
of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Akihiro Morita
- Department
of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
- Elements
Strategy Initiative for Catalysts and Batteries, Kyoto University, Kyoto 615-8520, Japan
| |
Collapse
|
232
|
Dolgounitcheva O, Zakrzewski V, Streit L, Ortiz J. Microsolvation effects on the electron binding energies of halide anions. Mol Phys 2014. [DOI: 10.1080/00268976.2013.812756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
233
|
Elkins MH, Williams HL, Shreve AT, Neumark DM. Relaxation mechanism of the hydrated electron. Science 2014; 342:1496-9. [PMID: 24357314 DOI: 10.1126/science.1246291] [Citation(s) in RCA: 102] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Abstract
The relaxation dynamics of the photoexcited hydrated electron have been subject to conflicting interpretations. Here, we report time-resolved photoelectron spectra of hydrated electrons in a liquid microjet with the aim of clarifying ambiguities from previous experiments. A sequence of three ultrashort laser pulses (~100 femtosecond duration) successively created hydrated electrons by charge-transfer-to-solvent excitation of dissolved anions, electronically excited these electrons via the s→p transition, and then ejected them into vacuum. Two distinct transient signals were observed. One was assigned to the initially excited p-state with a lifetime of ~75 femtoseconds, and the other, with a lifetime of ~400 femtoseconds, was attributed to s-state electrons just after internal conversion in a nonequilibrated solvent environment. These assignments support the nonadiabatic relaxation model.
Collapse
Affiliation(s)
- Madeline H Elkins
- Department of Chemistry, University of California, Berkeley, CA 94720, USA
| | | | | | | |
Collapse
|
234
|
In-situ Characterization of Molecular Processes in Liquids by Ultrafast X-ray Absorption Spectroscopy. IN-SITU MATERIALS CHARACTERIZATION 2014. [DOI: 10.1007/978-3-642-45152-2_1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
|
235
|
Vöhringer-Martinez E, Link O, Lugovoy E, Siefermann KR, Wiederschein F, Grubmüller H, Abel B. Hydrogen bond dynamics of superheated water and methanol by ultrafast IR-pump and EUV-photoelectron probe spectroscopy. Phys Chem Chem Phys 2014; 16:19365-75. [DOI: 10.1039/c4cp02063d] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Snapshot of superheated water 40 ps after fs-IR laser excitation; representative aggregates formed during the simulation (close-up) compared to one obtained from superheated methanol phase (inset).
Collapse
Affiliation(s)
- E. Vöhringer-Martinez
- Departamento de Físico-Química
- Facultad de Ciencias Químicas
- Universidad de Concepción
- Concepción, Chile
| | - O. Link
- Institut für Physikalische Chemie
- Georg August Universität Göttingen
- Göttingen, Germany
| | - E. Lugovoy
- Leibniz-Institute of Surface Modification (IOM)
- 04318 Leipzig, Germany
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie
- Universität Leipzig
- 04103 Leipzig, Germany
| | - K. R. Siefermann
- Leibniz-Institute of Surface Modification (IOM)
- 04318 Leipzig, Germany
| | - F. Wiederschein
- Max-Planck-Institut für biophysikalische Chemie
- 37077 Göttingen, Germany
| | - H. Grubmüller
- Max-Planck-Institut für biophysikalische Chemie
- 37077 Göttingen, Germany
| | - B. Abel
- Leibniz-Institute of Surface Modification (IOM)
- 04318 Leipzig, Germany
- Wilhelm-Ostwald-Institut für Physikalische und Theoretische Chemie
- Universität Leipzig
- 04103 Leipzig, Germany
| |
Collapse
|
236
|
Jordan I, Beloqui Redondo A, Brown MA, Fodor D, Staniuk M, Kleibert A, Wörner HJ, Giorgi JB, van Bokhoven JA. Non-uniform spatial distribution of tin oxide (SnO2) nanoparticles at the air–water interface. Chem Commun (Camb) 2014; 50:4242-4. [DOI: 10.1039/c4cc00720d] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Nanoparticle spatial distributions are determined at the air–water interface using X-ray photoelectron spectroscopy combined with a liquid microjet.
Collapse
Affiliation(s)
- Inga Jordan
- Laboratory of Physical Chemistry
- ETH Zürich
- Switzerland
| | | | - Matthew A. Brown
- Institute for Chemical and Bioengineering
- ETH Zürich
- Switzerland
- Paul Scherrer Institute
- Switzerland
| | - Daniel Fodor
- Institute for Chemical and Bioengineering
- ETH Zürich
- Switzerland
| | | | | | | | | | - Jeroen A. van Bokhoven
- Institute for Chemical and Bioengineering
- ETH Zürich
- Switzerland
- Paul Scherrer Institute
- Switzerland
| |
Collapse
|
237
|
Signorell R, Yoder BL, West AHC, Ferreiro JJ, Saak CM. Angle-resolved valence shell photoelectron spectroscopy of neutral nanosized molecular aggregates. Chem Sci 2014. [DOI: 10.1039/c3sc53423e] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Angle-resolved photoelectron spectroscopy opens a new avenue to probe the orbital character of solutes and solvents from the nanoscale to the bulk.
Collapse
Affiliation(s)
- Ruth Signorell
- ETH Zürich
- Laboratory of Physical Chemistry
- Zürich, Switzerland
| | - Bruce L. Yoder
- ETH Zürich
- Laboratory of Physical Chemistry
- Zürich, Switzerland
| | - Adam H. C. West
- ETH Zürich
- Laboratory of Physical Chemistry
- Zürich, Switzerland
| | | | | |
Collapse
|
238
|
Villar-Garcia IJ, Fearn S, De Gregorio GF, Ismail NL, Gschwend FJV, McIntosh AJS, Lovelock KRJ. The ionic liquid–vacuum outer atomic surface: a low-energy ion scattering study. Chem Sci 2014. [DOI: 10.1039/c4sc00640b] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
We have identified elements present in the ionic liquid–vacuum outer atomic surface of 23 ionic liquids using high sensitivity low-energy ion scattering (LEIS), a very surface sensitive technique.
Collapse
Affiliation(s)
| | - Sarah Fearn
- Department of Materials
- Imperial College London
- , UK
| | | | | | | | | | | |
Collapse
|
239
|
Kunnus K, Josefsson I, Schreck S, Quevedo W, Miedema PS, Techert S, de Groot FMF, Odelius M, Wernet P, Föhlisch A. From Ligand Fields to Molecular Orbitals: Probing the Local Valence Electronic Structure of Ni2+ in Aqueous Solution with Resonant Inelastic X-ray Scattering. J Phys Chem B 2013; 117:16512-21. [DOI: 10.1021/jp4100813] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Kristjan Kunnus
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
- Institut
für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Str.
24/25, 14476 Potsdam, Germany
| | - Ida Josefsson
- Department
of Physics, Stockholm University, AlbaNova University Center, 10691 Stockholm, Sweden
| | - Simon Schreck
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
- Institut
für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Str.
24/25, 14476 Potsdam, Germany
| | - Wilson Quevedo
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - Piter S. Miedema
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - Simone Techert
- Max
Planck Institute for Biophysical Chemistry, Am Faßberg 11, 37077 Göttingen, Germany
| | - Frank M. F. de Groot
- Department
of Chemistry, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, Netherlands
| | - Michael Odelius
- Department
of Physics, Stockholm University, AlbaNova University Center, 10691 Stockholm, Sweden
| | - Philippe Wernet
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - Alexander Föhlisch
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
- Institut
für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Str.
24/25, 14476 Potsdam, Germany
| |
Collapse
|
240
|
Nishizawa K, Ohshimo K, Suzuki T. Vacuum Ultraviolet and Soft X-ray Photoelectron Spectroscopy of Liquid Beams Using a Hemispherical Photoelectron Spectrometer with a Multistage Differential Pumping System. J CHIN CHEM SOC-TAIP 2013. [DOI: 10.1002/jccs.201300513] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
241
|
Thürmer S, Seidel R, Faubel M, Eberhardt W, Hemminger JC, Bradforth SE, Winter B. Photoelectron angular distributions from liquid water: effects of electron scattering. PHYSICAL REVIEW LETTERS 2013; 111:173005. [PMID: 24206487 DOI: 10.1103/physrevlett.111.173005] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2012] [Indexed: 05/03/2023]
Abstract
Photoelectron angular distributions (PADs) from the liquid-water surface and from bulk liquid water are reported for water oxygen-1s ionization. Although less so than for the gas phase, the measured PADs from the liquid are remarkably anisotropic, even at electron kinetic energies lower than 100 eV, when elastic scattering cross sections for the outgoing electrons with other water molecules are large. The PADs reveal that theoretical estimates of the inelastic mean free path are likely too long at low kinetic energies, and hence the electron probing depth in water, near threshold ionization, appears to be considerably smaller than so far assumed.
Collapse
Affiliation(s)
- Stephan Thürmer
- Joint Laboratory for Ultrafast Dynamics in Solutions and at Interfaces, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Strasse 15, D-12489 Berlin, Germany
| | | | | | | | | | | | | |
Collapse
|
242
|
|
243
|
Matsumura Y, Iida K, Sato H. Theoretical study on the ionization of aniline in aqueous solutions. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2013.08.081] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
244
|
Pin S, Huthwelker T, Brown MA, Vogel F. Combined sulfur K-edge XANES-EXAFS study of the effect of protonation on the sulfate tetrahedron in solids and solutions. J Phys Chem A 2013; 117:8368-76. [PMID: 23924171 DOI: 10.1021/jp404272e] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Sulfur K-edge X-ray absorption spectroscopy (XAS) has been used to distinguish between aqueous and solid sulfates and to investigate changes in their speciation. Data have been collected for tetrahedrally coordinated S in K2SO4 and KHSO4 solids and aqueous solutions. With a first qualitative analysis of the X-ray absorption near-edge structure (XANES) spectra, it has been observed that those for solids are much more structured and distinguishable from those of aqueous solutions. The protonation state has a strong effect on the white line of sulfates and has been assigned to the different charge delocalization in the samples, the effect of the solvating water molecules and multiple scattering effects. In the extended X-ray absorption fine structure (EXAFS) spectra, the backscattering from the first O shell dominated the EXAFS fine structure function, χ(k), but the nonlinear multiple scattering contributions occurring in the first coordination shell are significant and must be considered in the EXAFS analysis. The intensity of these contributions strongly depend on the symmetry of the system. For a distorted tetrahedron, the intensity of the multiple scattering contributions is less than that found in a regular tetrahedron. The FEFF code has been used to model the contributions of the multiple-scattering processes. The observed experimental evidence in the XAS data can be used to distinguish between sulfates in solids and liquids. This is applicable to many chemical, geochemical, and biological systems.
Collapse
Affiliation(s)
- S Pin
- Paul Scherrer Institut, General Energy Research, Laboratory for Bioenergy and Catalysis, CH-5232 Villigen PSI, Switzerland.
| | | | | | | |
Collapse
|
245
|
Brown MA, Redondo AB, Jordan I, Duyckaerts N, Lee MT, Ammann M, Nolting F, Kleibert A, Huthwelker T, Müächler JP, Birrer M, Honegger J, Wetter R, Wörner HJ, van Bokhoven JA. A new endstation at the Swiss Light Source for ultraviolet photoelectron spectroscopy, X-ray photoelectron spectroscopy, and X-ray absorption spectroscopy measurements of liquid solutions. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2013; 84:073904. [PMID: 23902081 DOI: 10.1063/1.4812786] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
A new liquid microjet endstation designed for ultraviolet (UPS) and X-ray (XPS) photoelectron, and partial electron yield X-ray absorption (XAS) spectroscopies at the Swiss Light Source is presented. The new endstation, which is based on a Scienta HiPP-2 R4000 electron spectrometer, is the first liquid microjet endstation capable of operating in vacuum and in ambient pressures up to the equilibrium vapor pressure of liquid water at room temperature. In addition, the Scienta HiPP-2 R4000 energy analyzer of this new endstation allows for XPS measurements up to 7000 eV electron kinetic energy that will enable electronic structure measurements of bulk solutions and buried interfaces from liquid microjet samples. The endstation is designed to operate at the soft X-ray SIM beamline and at the tender X-ray Phoenix beamline. The endstation can also be operated using a Scienta 5 K ultraviolet helium lamp for dedicated UPS measurements at the vapor-liquid interface using either He I or He II α lines. The design concept, first results from UPS, soft X-ray XPS, and partial electron yield XAS measurements, and an outlook to the potential of this endstation are presented.
Collapse
Affiliation(s)
- Matthew A Brown
- Institute for Chemical and Bioengineering, ETH Zürich, CH-8093 Zürich, Switzerland.
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
246
|
Bian H, Chen H, Zhang Q, Li J, Wen X, Zhuang W, Zheng J. Cation effects on rotational dynamics of anions and water molecules in alkali (Li+, Na+, K+, Cs+) thiocyanate (SCN-) aqueous solutions. J Phys Chem B 2013; 117:7972-84. [PMID: 23763605 DOI: 10.1021/jp4016646] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Waiting time dependent rotational anisotropies of SCN(-) anions and water molecules in alkali thiocyanate (XSCN, X = Li, Na, K, Cs) aqueous solutions at various concentrations were measured with ultrafast infrared spectroscopy. It was found that cations can significantly affect the reorientational motions of both water molecules and SCN(-) anions. The dynamics are slower in a solution with a smaller cation. The reorientational time constants follow the order of Li(+) > Na(+) > K(+) ~/= Cs(+). The changes of rotational time constants of SCN(-) at various concentrations scale almost linearly with the changes of solution viscosity, but those of water molecules do not. In addition, the concentration-dependent amplitudes of dynamical changes are much more significant in the Li(+) and Na(+) solutions than those in the K(+) and Cs(+) solutions. Further investigations on the systems with the ultrafast vibrational energy exchange method and molecular dynamics simulations provide an explanation for the observations: the observed rotational dynamics are the balanced results of ion clustering and cation/anion/water direct interactions. In all the solutions at high concentrations (>5 M), substantial amounts of ions form clusters. The structural inhomogeneity in the solutions leads to distinct rotational dynamics of water and anions. The strong interactions of Li(+) and Na(+) because of their relatively large charge densities with water molecules and SCN(-) anions, in addition to the likely geometric confinements because of ion clustering, substantially slow down the rotations of SCN(-) anions and water molecules inside the ion clusters. The interactions of K(+) and Cs(+) with water or SCN(-) are much weaker. The rotations of water molecules inside ion clusters of K(+) and Cs(+) solutions are not significantly different from those of other water species so that the experimentally observed rotational relaxation dynamics are only slightly affected by the ion concentrations.
Collapse
Affiliation(s)
- Hongtao Bian
- Department of Chemistry, Rice University, Houston, Texas 77005, USA
| | | | | | | | | | | | | |
Collapse
|
247
|
Thürmer S, Ončák M, Ottosson N, Seidel R, Hergenhahn U, Bradforth SE, Slavíček P, Winter B. On the nature and origin of dicationic, charge-separated species formed in liquid water on X-ray irradiation. Nat Chem 2013; 5:590-6. [DOI: 10.1038/nchem.1680] [Citation(s) in RCA: 90] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2012] [Accepted: 05/03/2013] [Indexed: 12/22/2022]
|
248
|
Affiliation(s)
- Bernd Abel
- Leibniz Institute of Surface Modification (IOM), Chemical Department, D-04318 Leipzig, Germany, and Wilhelm-Ostwald Institute for Physical and Theoretical Chemistry, D-04103 Leipzig, Germany;
| |
Collapse
|
249
|
Tobias DJ, Stern AC, Baer MD, Levin Y, Mundy CJ. Simulation and Theory of Ions at Atmospherically Relevant Aqueous Liquid-Air Interfaces. Annu Rev Phys Chem 2013; 64:339-59. [DOI: 10.1146/annurev-physchem-040412-110049] [Citation(s) in RCA: 133] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Douglas J. Tobias
- Department of Chemistry, University of California, Irvine, California 92697-2025; ,
| | - Abraham C. Stern
- Department of Chemistry, University of California, Irvine, California 92697-2025; ,
| | - Marcel D. Baer
- Chemical and Materials Science Division, Pacific Northwest National Laboratory, Richland, Washington 99352; ,
| | - Yan Levin
- Insituto de Física, Universidade Federal do Rio Grande do Sul, CEP 91501-970 Porto Alegre, RS, Brazil;
| | - Christopher J. Mundy
- Chemical and Materials Science Division, Pacific Northwest National Laboratory, Richland, Washington 99352; ,
| |
Collapse
|
250
|
Partanen L, Mikkelä MH, Huttula M, Tchaplyguine M, Zhang C, Andersson T, Björneholm O. Solvation at nanoscale: Alkali-halides in water clusters. J Chem Phys 2013; 138:044301. [DOI: 10.1063/1.4775586] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|