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For: Sousa R, Chung YJ, Rose JP, Wang BC. Crystal structure of bacteriophage T7 RNA polymerase at 3.3 A resolution. Nature 1993;364:593-9. [PMID: 7688864 DOI: 10.1038/364593a0] [Citation(s) in RCA: 298] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Number Cited by Other Article(s)
251
Rechinsky VO, Chernov BK, Dragan SM, Kostyuk DA, Tunitskaya VL, Kochetkov SN. Targeted mutagenesis identifies Asp-569 as a catalytically critical residue in T7 RNA polymerase. MOLECULAR & GENERAL GENETICS : MGG 1995;247:110-3. [PMID: 7715597 DOI: 10.1007/bf00425827] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
252
Jablonski SA, Morrow CD. Mutation of the aspartic acid residues of the GDD sequence motif of poliovirus RNA-dependent RNA polymerase results in enzymes with altered metal ion requirements for activity. J Virol 1995;69:1532-9. [PMID: 7853486 PMCID: PMC188746 DOI: 10.1128/jvi.69.3.1532-1539.1995] [Citation(s) in RCA: 73] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
253
Copeland WC, Tan X. Active site mapping of the catalytic mouse primase subunit by alanine scanning mutagenesis. J Biol Chem 1995;270:3905-13. [PMID: 7876136 DOI: 10.1074/jbc.270.8.3905] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
254
Cannon W, Austin S, Moore M, Buck M. Identification of close contacts between the sigma N (sigma 54) protein and promoter DNA in closed promoter complexes. Nucleic Acids Res 1995;23:351-6. [PMID: 7885829 PMCID: PMC306682 DOI: 10.1093/nar/23.3.351] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
255
Geiduschek EP. Connecting a viral DNA replication apparatus with gene expression. ACTA ACUST UNITED AC 1995. [DOI: 10.1016/s1044-5773(05)80006-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
256
Arnold E, Ding J, Hughes SH, Hostomsky Z. Structures of DNA and RNA polymerases and their interactions with nucleic acid substrates. Curr Opin Struct Biol 1995;5:27-38. [PMID: 7539708 DOI: 10.1016/0959-440x(95)80006-m] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
257
Astatke M, Grindley ND, Joyce CM. Deoxynucleoside triphosphate and pyrophosphate binding sites in the catalytically competent ternary complex for the polymerase reaction catalyzed by DNA polymerase I (Klenow fragment). J Biol Chem 1995;270:1945-54. [PMID: 7829532 DOI: 10.1074/jbc.270.4.1945] [Citation(s) in RCA: 98] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
258
Copeland WC, Dong Q, Wang TS. Rationale for mutagenesis of DNA polymerase active sites: DNA polymerase alpha. Methods Enzymol 1995;262:294-303. [PMID: 8594355 DOI: 10.1016/0076-6879(95)62025-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
259
Pelletier H. Polymerase structures and mechanism. Science 1994;266:2025-6. [PMID: 7801132 DOI: 10.1126/science.7801132] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
260
Steitz TA, Smerdon SJ, Jäger J, Joyce CM. A unified polymerase mechanism for nonhomologous DNA and RNA polymerases. Science 1994;266:2022-5. [PMID: 7528445 DOI: 10.1126/science.7528445] [Citation(s) in RCA: 230] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
261
Hermann T, Meier T, Götte M, Heumann H. The 'helix clamp' in HIV-1 reverse transcriptase: a new nucleic acid binding motif common in nucleic acid polymerases. Nucleic Acids Res 1994;22:4625-33. [PMID: 7527138 PMCID: PMC308510 DOI: 10.1093/nar/22.22.4625] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
262
Méndez J, Blanco L, Lázaro JM, Salas M. Primer-terminus stabilization at the psi 29 DNA polymerase active site. Mutational analysis of conserved motif TX2GR. J Biol Chem 1994. [DOI: 10.1016/s0021-9258(18)43984-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
263
Bonner G, Lafer E, Sousa R. Characterization of a set of T7 RNA polymerase active site mutants. J Biol Chem 1994. [DOI: 10.1016/s0021-9258(17)31506-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
264
The thumb subdomain of T7 RNA polymerase functions to stabilize the ternary complex during processive transcription. J Biol Chem 1994. [DOI: 10.1016/s0021-9258(17)31507-7] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]  Open
265
Jäger J, Smerdon SJ, Wang J, Boisvert DC, Steitz TA. Comparison of three different crystal forms shows HIV-1 reverse transcriptase displays an internal swivel motion. Structure 1994;2:869-76. [PMID: 7529124 DOI: 10.1016/s0969-2126(94)00087-5] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
266
Mikita T, Beardsley GP. Effects of arabinosylcytosine-substituted DNA on DNA/RNA hybrid stability and transcription by T7 RNA polymerase. Biochemistry 1994;33:9195-208. [PMID: 7519442 DOI: 10.1021/bi00197a023] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
267
Protasevich II, Memelova LV, Kochetkov SN, Makarov AA. The studies of cooperative regions in T7 RNA polymerase. FEBS Lett 1994;349:429-32. [PMID: 8050609 DOI: 10.1016/0014-5793(94)00718-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
268
Eick D, Wedel A, Heumann H. From initiation to elongation: comparison of transcription by prokaryotic and eukaryotic RNA polymerases. Trends Genet 1994;10:292-6. [PMID: 7940759 DOI: 10.1016/0168-9525(90)90013-v] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
269
Frugier M, Florentz C, Hosseini MW, Lehn JM, Giegé R. Synthetic polyamines stimulate in vitro transcription by T7 RNA polymerase. Nucleic Acids Res 1994;22:2784-90. [PMID: 8052534 PMCID: PMC308248 DOI: 10.1093/nar/22.14.2784] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
270
Holm L, Sander C. Searching protein structure databases has come of age. Proteins 1994;19:165-73. [PMID: 7937731 DOI: 10.1002/prot.340190302] [Citation(s) in RCA: 188] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
271
Sawaya MR, Pelletier H, Kumar A, Wilson SH, Kraut J. Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism. Science 1994;264:1930-5. [PMID: 7516581 DOI: 10.1126/science.7516581] [Citation(s) in RCA: 389] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
272
Pelletier H, Sawaya MR, Kumar A, Wilson SH, Kraut J. Structures of Ternary Complexes of Rat DNA Polymerase β, a DNA Template-Primer, and ddCTP. Science 1994. [DOI: 10.1126/science.7516580] [Citation(s) in RCA: 567] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
273
Ding J, Jacobo-Molina A, Tantillo C, Lu X, Nanni RG, Arnold E. Buried surface analysis of HIV-1 reverse transcriptase p66/p51 heterodimer and its interaction with dsDNA template/primer. J Mol Recognit 1994;7:157-61. [PMID: 7530020 DOI: 10.1002/jmr.300070212] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
274
Cheng X, Zhang X, Pflugrath JW, Studier FW. The structure of bacteriophage T7 lysozyme, a zinc amidase and an inhibitor of T7 RNA polymerase. Proc Natl Acad Sci U S A 1994;91:4034-8. [PMID: 8171031 PMCID: PMC43717 DOI: 10.1073/pnas.91.9.4034] [Citation(s) in RCA: 175] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]  Open
275
Tinker RL, Williams KP, Kassavetis GA, Geiduschek EP. Transcriptional activation by a DNA-tracking protein: structural consequences of enhancement at the T4 late promoter. Cell 1994;77:225-37. [PMID: 8168131 DOI: 10.1016/0092-8674(94)90315-8] [Citation(s) in RCA: 54] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
276
Davies JF, Almassy RJ, Hostomska Z, Ferre RA, Hostomsky Z. 2.3 A crystal structure of the catalytic domain of DNA polymerase beta. Cell 1994;76:1123-33. [PMID: 8137427 DOI: 10.1016/0092-8674(94)90388-3] [Citation(s) in RCA: 146] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
277
Lindahl M, Svensson LA, Liljas A, Sedelnikova SE, Eliseikina IA, Fomenkova NP, Nevskaya N, Nikonov SV, Garber MB, Muranova TA. Crystal structure of the ribosomal protein S6 from Thermus thermophilus. EMBO J 1994;13:1249-54. [PMID: 8137808 PMCID: PMC394938 DOI: 10.2210/pdb1ris/pdb] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]  Open
278
Wain-Hobson S. The fastest genome evolution ever described: HIV variation in situ. Curr Opin Genet Dev 1993;3:878-83. [PMID: 7509668 DOI: 10.1016/0959-437x(93)90008-d] [Citation(s) in RCA: 64] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
279
McAllister WT, Raskin CA. The phage RNA polymerases are related to DNA polymerases and reverse transcriptases. Mol Microbiol 1993;10:1-6. [PMID: 7526118 DOI: 10.1111/j.1365-2958.1993.tb00897.x] [Citation(s) in RCA: 67] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
280
Moras D. Polymerases. Two sisters and their cousin. Nature 1993;364:572-3. [PMID: 7688863 DOI: 10.1038/364572a0] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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