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Fan XY, Yu Y, Yao Y, Li WD, Tao FY, Wang N. Applications of Ene-Reductases in the Synthesis of Flavors and Fragrances. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024. [PMID: 38966982 DOI: 10.1021/acs.jafc.4c02897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/06/2024]
Abstract
Flavors and fragrances (F&F) are interesting organic compounds in chemistry. These compounds are widely used in the food, cosmetic, and medical industries. Enzymatic synthesis exhibits several advantages over natural extraction and chemical preparation, including a high yield, stable quality, mildness, and environmental friendliness. To date, many oxidoreductases and hydrolases have been used to biosynthesize F&F. Ene-reductases (ERs) are a class of biocatalysts that can catalyze the asymmetric reduction of α,β-unsaturated compounds and offer superior specificity and selectivity; therefore, ERs have been increasingly considered an ideal alternative to their chemical counterparts. This review summarizes the research progress on the use of ERs in F&F synthesis over the past 20 years, including the achievements of various scholars, the differences and similarities among the findings, and the discussions of future research trends related to ERs. We hope this review can inspire researchers to promote the development of biotechnology in the F&F industry.
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Affiliation(s)
- Xin-Yue Fan
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu, Sichuan 610064, People's Republic of China
| | - Yuan Yu
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu, Sichuan 610064, People's Republic of China
| | - Yao Yao
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu, Sichuan 610064, People's Republic of China
| | - Wen-Dian Li
- Harmful Components and Tar Reduction in Cigarette Key Laboratory of Sichuan Province, China Tobacco Sichuan Industrial Company, Limited, Chengdu, Sichuan 610066, People's Republic of China
- Sichuan Sanlian New Material Company, Limited, Chengdu, Sichuan 610041, People's Republic of China
| | - Fei-Yan Tao
- Harmful Components and Tar Reduction in Cigarette Key Laboratory of Sichuan Province, China Tobacco Sichuan Industrial Company, Limited, Chengdu, Sichuan 610066, People's Republic of China
- Sichuan Sanlian New Material Company, Limited, Chengdu, Sichuan 610041, People's Republic of China
| | - Na Wang
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu, Sichuan 610064, People's Republic of China
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2
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Zhang Y, Guo J, VanNatta P, Jiang Y, Phipps J, Roknuzzaman R, Rabaâ H, Tan K, AlShahrani T, Ma S. Metal-Free Heterogeneous Asymmetric Hydrogenation of Olefins Promoted by Chiral Frustrated Lewis Pair Framework. J Am Chem Soc 2024; 146:979-987. [PMID: 38117691 DOI: 10.1021/jacs.3c11607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2023]
Abstract
The development of metal-free and recyclable catalysts for significant yet challenging transformations of naturally abundant feedstocks has long been sought after. In this work, we contribute a general strategy of combining the rationally designed crystalline covalent organic framework (COF) with a newly developed chiral frustrated Lewis pair (CFLP) to afford chiral frustrated Lewis pair framework (CFLPF), which can efficiently promote the asymmetric olefin hydrogenation in a heterogeneous manner, outperforming the homogeneous CFLP counterpart. Notably, the metal-free CFLPF exhibits superior activity/enantioselectivity in addition to excellent stability/recyclability. A series of in situ spectroscopic studies, kinetic isotope effect measurements, and density-functional theory computational calculations were also performed to gain an insightful understanding of the superior asymmetric hydrogenation catalysis performances of CFLPF. Our work not only increases the versatility of catalysts for asymmetric catalysis but also broadens the reactivity of porous organic materials with the addition of frustrated Lewis pair (FLP) chemistry, thereby suggesting a new approach for practical and substantial transformations through the advancement of novel catalysts from both concept and design perspectives.
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Affiliation(s)
- Yin Zhang
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
| | - Jun Guo
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, Tianjin 300387, China
| | - Peter VanNatta
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
| | - Yao Jiang
- School of Chemistry and Chemical Engineering, Hefei University of Technology, Hefei 230009, China
| | - Joshua Phipps
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
| | - Roknuzzaman Roknuzzaman
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
| | - Hassan Rabaâ
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
- Department of Chemistry, Ibn Tofail University, ESCTM, Kenitra 14000, Morocco
| | - Kui Tan
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
| | - Thamraa AlShahrani
- Department of Physics, College of Science, Princess Nourah bint Abdulrahman University, Riyadh 11564, Saudi Arabia
| | - Shengqian Ma
- Department of Chemistry, University of North Texas, 1508 W Mulberry St, Denton, Texas 76201, United States
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3
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Simić S, Zukić E, Schmermund L, Faber K, Winkler CK, Kroutil W. Shortening Synthetic Routes to Small Molecule Active Pharmaceutical Ingredients Employing Biocatalytic Methods. Chem Rev 2021; 122:1052-1126. [PMID: 34846124 DOI: 10.1021/acs.chemrev.1c00574] [Citation(s) in RCA: 69] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Biocatalysis, using enzymes for organic synthesis, has emerged as powerful tool for the synthesis of active pharmaceutical ingredients (APIs). The first industrial biocatalytic processes launched in the first half of the last century exploited whole-cell microorganisms where the specific enzyme at work was not known. In the meantime, novel molecular biology methods, such as efficient gene sequencing and synthesis, triggered breakthroughs in directed evolution for the rapid development of process-stable enzymes with broad substrate scope and good selectivities tailored for specific substrates. To date, enzymes are employed to enable shorter, more efficient, and more sustainable alternative routes toward (established) small molecule APIs, and are additionally used to perform standard reactions in API synthesis more efficiently. Herein, large-scale synthetic routes containing biocatalytic key steps toward >130 APIs of approved drugs and drug candidates are compared with the corresponding chemical protocols (if available) regarding the steps, reaction conditions, and scale. The review is structured according to the functional group formed in the reaction.
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Affiliation(s)
- Stefan Simić
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria
| | - Erna Zukić
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria
| | - Luca Schmermund
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria
| | - Kurt Faber
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria
| | - Christoph K Winkler
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria
| | - Wolfgang Kroutil
- Institute of Chemistry, University of Graz, NAWI Graz, Heinrichstraße 28, 8010 Graz, Austria.,Field of Excellence BioHealth─University of Graz, 8010 Graz, Austria.,BioTechMed Graz, 8010 Graz, Austria
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Shi Q, Jia Y, Wang H, Li S, Li H, Guo J, Dou T, Qin B, You S. Identification of four ene reductases and their preliminary exploration in the asymmetric synthesis of (R)-dihydrocarvone and (R)-profen derivatives. Enzyme Microb Technol 2021; 150:109880. [PMID: 34489033 DOI: 10.1016/j.enzmictec.2021.109880] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Revised: 07/23/2021] [Accepted: 07/27/2021] [Indexed: 11/16/2022]
Abstract
The ene reductases (ERs) from the old yellow enzymes (OYEs) family have the ability to reduce activated alkenes to generate up to two stereocenters, therefore they have been received extensive attention as powerful biocatalysts. In this study, through gene mining, four ERs were identified from the genomes of Ensifer adhaerens, Pseudomonas fluorescens, and Pseudomonas veronil. The biocatalytic properties of these four ERs were identified, and their applications in the synthesis process of dihydrocarvone and profen derivatives were further evaluated. Among them, three ERs (EaER2, PvER1, and PvER2) belonging to the classic OYEs showed the best catalytic activity at 30 °C and pH 7.0 (100 mM potassium phosphate buffer) and the PfER2, which belongs to the thermophilic-like OYEs exhibited the best catalytic at 40 °C and pH 7.0 (100 mM potassium phosphate buffer). When exploring the influence of organic solvents on the catalytic efficiency, it was found that the four ERs were more sensitive to toluene and had tolerance to several other selected organic solvents. In addition, EaER2, PfER2, PvER1 and PvER2 showed excellent catalytic activity toward carvone, and the stereoselectivity of PvER2 toward carvone could reach up to 88.7 % de. EaER2 and PfER2 can catalyze the synthesis of a variety of profen derivatives with a stereoselectivity over 99 % ee. Moreover, through homology modeling and molecular docking, we preliminarily explained the mechanism of catalytic activity and stereoselectivity of the four ERs, which provided a solid base on the rational design of their stereo-preference in the future. The discovery of EaER2, PfER2, PvER1, and PvER2 provides four new enzyme sources for the study of the OYEs family and enriches the biocatalytic toolbox of ERs. Our exploration of the enzymatic properties of these four ERs will provide the sufficient data basis for future research and industrialization progress.
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Affiliation(s)
- Qinghua Shi
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Yutian Jia
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Huibin Wang
- School of Pharmacy, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Shang Li
- Wuya College of Innovation, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Hengyu Li
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Jiyang Guo
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Tong Dou
- Wuya College of Innovation, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China
| | - Bin Qin
- Wuya College of Innovation, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China.
| | - Song You
- School of Life Sciences and Biopharmaceutical Sciences, Shenyang Pharmaceutical University, 103 Wenhua Road, Shenhe, Shenyang, 110016, People's Republic of China.
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Liu G, Li S, Shi Q, Li H, Guo J, Ouyang J, Jia X, Zhang L, You S, Qin B. Engineering of Saccharomyces pastorianus old yellow enzyme 1 for the synthesis of pharmacologically active (S)-profen derivatives. MOLECULAR CATALYSIS 2021. [DOI: 10.1016/j.mcat.2021.111568] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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6
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Old yellow enzymes: structures and structure-guided engineering for stereocomplementary bioreduction. Appl Microbiol Biotechnol 2020; 104:8155-8170. [PMID: 32830294 DOI: 10.1007/s00253-020-10845-z] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 08/07/2020] [Accepted: 08/17/2020] [Indexed: 10/23/2022]
Abstract
Since the first discovery of old yellow enzyme 1 (OYE1) from Saccharomyces pastorianus in 1932, biocatalytic asymmetric reduction of activated alkenes by OYEs has become a valuable reaction in organic synthesis. To access stereocomplementary C=C-bond bioreduction, the mining of novel OYEs and especially the protein engineering of existing OYEs have been performed, which successfully achieved the stereocomplementary reduction in several cases and further raise the potential of applications. In this review, we analyzed the structures, active sites, and substrate recognition of OYEs, which are the bases for their substrate specificity and stereospecificity. Sequence similarity network of OYEs superfamily was also constructed to investigate the scope of characterized OYEs. The structure-guided engineering to switch the stereoselectivity of OYEs and thus access stereocomplementary bioreduction over the last decade (2009-2020) was then reviewed and discussed, which might give new insights into the mining and engineering of related biocatalysts. KEY POINTS: • The sequence similarity network of OYEs superfamily was constructed and annotated. • The structures and active sites of OYEs from different classes were compared. • "Left/right" binding mode was used to explain the stereopreferences of OYEs. • Structure-guided engineering of OYEs to switch their stereoselectivity was reviewed.
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Abstract
Ene reductases enable the asymmetric hydrogenation of activated alkenes allowing the manufacture of valuable chiral products. The enzymes complement existing metal- and organocatalytic approaches for the stereoselective reduction of activated C=C double bonds, and efforts to expand the biocatalytic toolbox with additional ene reductases are of high academic and industrial interest. Here, we present the characterization of a novel ene reductase from Paenibacillus polymyxa, named Ppo-Er1, belonging to the recently identified subgroup III of the old yellow enzyme family. The determination of substrate scope, solvent stability, temperature, and pH range of Ppo-Er1 is one of the first examples of a detailed biophysical characterization of a subgroup III enzyme. Notably, Ppo-Er1 possesses a wide temperature optimum (Topt: 20–45 °C) and retains high conversion rates of at least 70% even at 10 °C reaction temperature making it an interesting biocatalyst for the conversion of temperature-labile substrates. When assaying a set of different organic solvents to determine Ppo-Er1′s solvent tolerance, the ene reductase exhibited good performance in up to 40% cyclohexane as well as 20 vol% DMSO and ethanol. In summary, Ppo-Er1 exhibited activity for thirteen out of the nineteen investigated compounds, for ten of which Michaelis–Menten kinetics could be determined. The enzyme exhibited the highest specificity constant for maleimide with a kcat/KM value of 287 mM−1 s−1. In addition, Ppo-Er1 proved to be highly enantioselective for selected substrates with measured enantiomeric excess values of 92% or higher for 2-methyl-2-cyclohexenone, citral, and carvone.
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8
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Crotti M, Parmeggiani F, Ferrandi EE, Gatti FG, Sacchetti A, Riva S, Brenna E, Monti D. Stereoselectivity Switch in the Reduction of α-Alkyl-β-Arylenones by Structure-Guided Designed Variants of the Ene Reductase OYE1. Front Bioeng Biotechnol 2019; 7:89. [PMID: 31080798 PMCID: PMC6497740 DOI: 10.3389/fbioe.2019.00089] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 04/10/2019] [Indexed: 11/13/2022] Open
Abstract
Ene reductases from the Old Yellow Enzyme (OYE) family are industrially interesting enzymes for the biocatalytic asymmetric reduction of alkenes. To access both enantiomers of the target reduced products, stereocomplementary pairs of OYE enzymes are necessary, but their natural occurrence is quite limited. A library of wild type ene reductases from different sources was screened in the stereoselective reduction of a set of representative α-alkyl-β-arylenones to investigate the naturally available biodiversity. As far as the bioreduction of the ethyl ketone derivatives concerns, the results confirmed the distinctiveness of the OYE3 enzyme in affording the reduced product in the (S) configuration, while all the other tested ene reductases from the Old Yellow Enzymes family showed the same stereoselectivity toward the formation of corresponding (R) enantiomer. A possible determinant role of the "hot spot" residue in position 296 for the stereoselectivity control of these reactions was confirmed by the replacement of Phe296 of OYE1 with Ser as found in OYE3. Further investigations showed that the same stereoselectivity switch in OYE1 could be achieved also by the replacement of Trp116 with Ala and Val, these experimental results being rationalized by structural and docking studies. Moreover, an additive effect on the stereoselectivity of OYE1 was observed when coupling the selected mutations in position 296 and 116, thus providing two extremely enantioselective variants of OYE1 (W116A-F296S, W116V-F296S) showing the opposite stereoselectivity of the wild type enzyme. Lastly, the effects of the mutations on the bioreduction of carvone enantiomers were investigated as well.
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Affiliation(s)
- Michele Crotti
- Dipartimento di Chimica, Materiali e Ingegneria Chimica “G. Natta”, Politecnico di Milano, Milan, Italy
| | - Fabio Parmeggiani
- Dipartimento di Chimica, Materiali e Ingegneria Chimica “G. Natta”, Politecnico di Milano, Milan, Italy
| | | | - Francesco G. Gatti
- Dipartimento di Chimica, Materiali e Ingegneria Chimica “G. Natta”, Politecnico di Milano, Milan, Italy
| | - Alessandro Sacchetti
- Dipartimento di Chimica, Materiali e Ingegneria Chimica “G. Natta”, Politecnico di Milano, Milan, Italy
| | - Sergio Riva
- Istituto di Chimica del Riconoscimento Molecolare, C.N.R., Milan, Italy
| | - Elisabetta Brenna
- Dipartimento di Chimica, Materiali e Ingegneria Chimica “G. Natta”, Politecnico di Milano, Milan, Italy
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare, C.N.R., Milan, Italy
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9
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Seo CSG, Morris RH. Catalytic Homogeneous Asymmetric Hydrogenation: Successes and Opportunities. Organometallics 2018. [DOI: 10.1021/acs.organomet.8b00774] [Citation(s) in RCA: 135] [Impact Index Per Article: 22.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Chris S. G. Seo
- Department of Chemistry, University of Toronto, M5S3H6 Toronto, Ontario, Canada
| | - Robert H. Morris
- Department of Chemistry, University of Toronto, M5S3H6 Toronto, Ontario, Canada
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Eshon J, Foarta F, Landis CR, Schomaker JM. α-Tetrasubstituted Aldehydes through Electronic and Strain-Controlled Branch-Selective Stereoselective Hydroformylation. J Org Chem 2018; 83:10207-10220. [PMID: 30070109 DOI: 10.1021/acs.joc.8b01431] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydroformylation utilizes dihydrogen, carbon monoxide, and a catalyst to transform alkenes into aldehydes. This work applies chiral bisdiazaphospholane (BDP)- and bisphospholanoethane-ligated rhodium complexes to the hydroformylation of a variety of alkenes to produce chiral tetrasubstituted aldehydes. 1,1'-Disubstituted acrylates bearing electron-withdrawing substituents undergo hydroformylation under mild conditions (1 mol % of catalyst/BDP ligand, 150 psig gas, 60 °C) with high conversions and yields of tetrasubstituted aldehydes (e.g., 13:1 regioselectivity, 85% ee, and <1% hydrogenation for 1-fluoromethyl acrylate). The scope also encompasses both acyclic 1,1'-disubstituted and trisubstituted, electron-poor alkenes as well as di- and trisubstituted alkenes composed of small rings with exocyclic and endocyclic unsaturation. For example, 1-methylene-β-lactam furnished the tetrasubstituted aldehyde with 98% selectivity and up to 83% ee. Notably, chiral trisubstituted bicyclic methyleneaziridines are transformed with >99% regioselectivity and >19:1 diastereoselectivity to tetrasubstituted aldehydes at rates >50 catalyst turnovers/hour. NMR studies of the noncatalytic reaction of HRh(BDP)(CO)2 with methyl 1-fluoroacrylate enable interception of tertiary alkylrhodium intermediates, demonstrating migratory insertion to acyl species is slower than formation of secondary and primary alkylrhodium intermediates. Overall, these investigations reveal how the interplay of sterics, electronics, and ring strain are harnessed to provide access to valuable α-tetrasubstituted aldehyde synthetic building blocks by promoting branched-selective hydroformylation.
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Affiliation(s)
- Josephine Eshon
- Department of Chemistry , University of Wisconsin-Madison , 1101 University Avenue , Madison , Wisconsin 53706 , United States
| | - Floriana Foarta
- Department of Chemistry , University of Wisconsin-Madison , 1101 University Avenue , Madison , Wisconsin 53706 , United States
| | - Clark R Landis
- Department of Chemistry , University of Wisconsin-Madison , 1101 University Avenue , Madison , Wisconsin 53706 , United States
| | - Jennifer M Schomaker
- Department of Chemistry , University of Wisconsin-Madison , 1101 University Avenue , Madison , Wisconsin 53706 , United States
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11
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Li Z, Wang Z, Meng G, Lu H, Huang Z, Chen F. Identification of an Ene Reductase from Yeast Kluyveromyces Marxianus
and Application in the Asymmetric Synthesis of (R
)-Profen Esters. ASIAN J ORG CHEM 2018. [DOI: 10.1002/ajoc.201800059] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Zhining Li
- Engineering Center of Catalysis and Synthesis for Chiral Molecules; Department of Chemistry; Fudan University; 220 Handan Road Shanghai 200433 P. R. China
- Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs; 220 Handan Road Shanghai 200433 P. R. China
| | - Zexu Wang
- Engineering Center of Catalysis and Synthesis for Chiral Molecules; Department of Chemistry; Fudan University; 220 Handan Road Shanghai 200433 P. R. China
- Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs; 220 Handan Road Shanghai 200433 P. R. China
| | - Ge Meng
- Engineering Center of Catalysis and Synthesis for Chiral Molecules; Department of Chemistry; Fudan University; 220 Handan Road Shanghai 200433 P. R. China
- Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs; 220 Handan Road Shanghai 200433 P. R. China
| | - Hong Lu
- State Key Laboratory of Genetic Engineering; School of Life Sciences; Fudan University, 2005 Songhu Road; Shanghai 200438 P. R. China
- Shanghai Engineering Research Center of Industrial Microorganisms; 2005 Songhu Road Shanghai 200438 P. R. China
| | - Zedu Huang
- Engineering Center of Catalysis and Synthesis for Chiral Molecules; Department of Chemistry; Fudan University; 220 Handan Road Shanghai 200433 P. R. China
- Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs; 220 Handan Road Shanghai 200433 P. R. China
| | - Fener Chen
- Engineering Center of Catalysis and Synthesis for Chiral Molecules; Department of Chemistry; Fudan University; 220 Handan Road Shanghai 200433 P. R. China
- Shanghai Engineering Research Center of Industrial Asymmetric Catalysis of Chiral Drugs; 220 Handan Road Shanghai 200433 P. R. China
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12
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Harkness GJ, Clarke ML. A Highly Enantioselective Alkene Methoxycarbonylation Enables a Concise Synthesis of (S)-Flurbiprofen. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700791] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Gavin J. Harkness
- School of Chemistry; University of St Andrews; EaStCHEM; KY16 9ST St Andrews Fife Scotland, UK
| | - Matthew L. Clarke
- School of Chemistry; University of St Andrews; EaStCHEM; KY16 9ST St Andrews Fife Scotland, UK
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13
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Hönig M, Sondermann P, Turner NJ, Carreira EM. Enantioselective Chemo- and Biocatalysis: Partners in Retrosynthesis. Angew Chem Int Ed Engl 2017; 56:8942-8973. [DOI: 10.1002/anie.201612462] [Citation(s) in RCA: 194] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Indexed: 01/08/2023]
Affiliation(s)
- Moritz Hönig
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Philipp Sondermann
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Nicholas J. Turner
- Manchester Institute of Biotechnology & School of Chemistry; University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Erick M. Carreira
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
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14
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Hönig M, Sondermann P, Turner NJ, Carreira EM. Enantioselektive Chemo- und Biokatalyse: Partner in der Retrosynthese. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201612462] [Citation(s) in RCA: 70] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Moritz Hönig
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
| | - Philipp Sondermann
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
| | - Nicholas J. Turner
- Manchester Institute of Biotechnology & School of Chemistry; University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Erick M. Carreira
- Laboratorium für Organische Chemie; Eidgenössische Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Schweiz
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15
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Waller J, Toogood HS, Karuppiah V, Rattray NJW, Mansell DJ, Leys D, Gardiner JM, Fryszkowska A, Ahmed ST, Bandichhor R, Reddy GP, Scrutton NS. Structural insights into the ene-reductase synthesis of profens. Org Biomol Chem 2017; 15:4440-4448. [PMID: 28485453 DOI: 10.1039/c7ob00163k] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Reduction of double bonds of α,β-unsaturated carboxylic acids and esters by ene-reductases remains challenging and it typically requires activation by a second electron-withdrawing moiety, such as a halide or second carboxylate group. We showed that profen precursors, 2-arylpropenoic acids and their esters, were efficiently reduced by Old Yellow Enzymes (OYEs). The XenA and GYE enzymes showed activity towards acids, while a wider range of enzymes were active towards the equivalent methyl esters. Comparative co-crystal structural analysis of profen-bound OYEs highlighted key interactions important in determining substrate binding in a catalytically active conformation. The general utility of ene reductases for the synthesis of (R)-profens was established and this work will now drive future mutagenesis studies to screen for the production of pharmaceutically-active (S)-profens.
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Affiliation(s)
- J Waller
- Manchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
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16
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Pesic M, Fernández-Fueyo E, Hollmann F. Characterization of the Old Yellow Enzyme Homolog fromBacillus subtilis(YqjM). ChemistrySelect 2017. [DOI: 10.1002/slct.201700724] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Milja Pesic
- Department of Biotechnology; Delft University of Technology; Van der Maasewg 9 2629HZ Delft, The Netherlands
| | - Elena Fernández-Fueyo
- Department of Biotechnology; Delft University of Technology; Van der Maasewg 9 2629HZ Delft, The Netherlands
| | - Frank Hollmann
- Department of Biotechnology; Delft University of Technology; Van der Maasewg 9 2629HZ Delft, The Netherlands
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17
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Old Yellow Enzyme-Catalysed Asymmetric Hydrogenation: Linking Family Roots with Improved Catalysis. Catalysts 2017. [DOI: 10.3390/catal7050130] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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18
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Efficient resolution of profen ethyl ester racemates by engineered Yarrowia lipolytica Lip2p lipase. ACTA ACUST UNITED AC 2017. [DOI: 10.1016/j.tetasy.2017.01.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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19
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Paula BRS, Zampieri D, Rodrigues JAR, Moran PJS. Bioreduction of α-Acetoxymethyl Enones: Proposal for an SN2′ Mechanism Catalyzed by Enereductase. Adv Synth Catal 2016. [DOI: 10.1002/adsc.201600601] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Bruno R. S. Paula
- Institute of Chemistry; University of Campinas; 13084-971 Campinas-SP Brazil
| | - Davila Zampieri
- Institute of Chemistry; University of Campinas; 13084-971 Campinas-SP Brazil
| | | | - Paulo J. S. Moran
- Institute of Chemistry; University of Campinas; 13084-971 Campinas-SP Brazil
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20
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Löw SA, Löw IM, Weissenborn MJ, Hauer B. Enhanced Ene-Reductase Activity through Alteration of Artificial Nicotinamide Cofactor Substituents. ChemCatChem 2016. [DOI: 10.1002/cctc.201501230] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sebastian A. Löw
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Isabell M. Löw
- Institute of Inorganic Chemistry; University of Stuttgart; Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Martin J. Weissenborn
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Bernhard Hauer
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
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21
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Edwards A, Rubin M. Synthesis of 1-arylcycloprop-2-ene carboxylates with non-substituted double bond via a Rh(II)-catalyzed cyclopropenation of trimethylsilylacetylene with coarsely purified aryldiazoacetates. Tetrahedron 2015. [DOI: 10.1016/j.tet.2015.03.120] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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22
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Rüthlein E, Classen T, Dobnikar L, Schölzel M, Pietruszka J. Finding the Selectivity Switch - A Rational Approach towards Stereocomplementary Variants of the Ene Reductase YqjM. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500149] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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23
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Toogood HS, Scrutton NS. New developments in 'ene'-reductase catalysed biological hydrogenations. Curr Opin Chem Biol 2014; 19:107-15. [PMID: 24608082 DOI: 10.1016/j.cbpa.2014.01.019] [Citation(s) in RCA: 98] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2013] [Revised: 12/13/2013] [Accepted: 01/30/2014] [Indexed: 01/07/2023]
Abstract
Asymmetric biocatalytic hydrogenations are important reactions performed primarily by members of the Old Yellow Enzyme family. These reactions have great potential in the chemosynthesis of a variety of industrially useful synthons due to the generation of up to two stereogenic centres. In this review, additional enzyme classes capable of asymmetric hydrogenations will be discussed, as will examples of multienzyme cascading reactions. New and improved technology that enhances the commercial viability of biotransformations are included, such as the nicotinamide coenzyme-independent reactions. This review will focus on progress in this field within the last two years, with emphasis on industrial applications of this technology.
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Affiliation(s)
- Helen S Toogood
- Manchester Institute of Biotechnology, Faculty of Life Sciences, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK
| | - Nigel S Scrutton
- Manchester Institute of Biotechnology, Faculty of Life Sciences, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
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24
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Nestl BM, Hammer SC, Nebel BA, Hauer B. New generation of biocatalysts for organic synthesis. Angew Chem Int Ed Engl 2014; 53:3070-95. [PMID: 24520044 DOI: 10.1002/anie.201302195] [Citation(s) in RCA: 230] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Indexed: 02/04/2023]
Abstract
The use of enzymes as catalysts for the preparation of novel compounds has received steadily increasing attention over the past few years. High demands are placed on the identification of new biocatalysts for organic synthesis. The catalysis of more ambitious reactions reflects the high expectations of this field of research. Enzymes play an increasingly important role as biocatalysts in the synthesis of key intermediates for the pharmaceutical and chemical industry, and new enzymatic technologies and processes have been established. Enzymes are an important part of the spectrum of catalysts available for synthetic chemistry. The advantages and applications of the most recent and attractive biocatalysts--reductases, transaminases, ammonia lyases, epoxide hydrolases, and dehalogenases--will be discussed herein and exemplified by the syntheses of interesting compounds.
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Affiliation(s)
- Bettina M Nestl
- Technische Biochemie, Universität Stuttgart, Stuttgart (Germany)
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25
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Nestl BM, Hammer SC, Nebel BA, Hauer B. Biokatalysatoren für die organische Synthese - die neue Generation. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201302195] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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26
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Ni Y, Yu HL, Lin GQ, Xu JH. An ene reductase from Clavispora lusitaniae for asymmetric reduction of activated alkenes. Enzyme Microb Technol 2014; 56:40-5. [PMID: 24564901 DOI: 10.1016/j.enzmictec.2013.12.016] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2013] [Revised: 12/09/2013] [Accepted: 12/30/2013] [Indexed: 01/15/2023]
Abstract
A putative ene reductase gene from Clavispora lusitaniae was heterologously overexpressed in Escherichia coli, and the encoded protein (ClER) was purified and characterized for its biocatalytic properties. This NADPH-dependent flavoprotein was identified with reduction activities toward a diverse range of activated alkenes including conjugated enones, enals, maleimide derivative and α,β-unsaturated carboxylic esters. The purified ClER exhibited a relatively high activity of 7.3 U mg(prot)⁻¹ for ketoisophorone while a remarkable catalytic efficiency (k(cat)/K(m)=810 s⁻¹ mM⁻¹) was obtained for 2-methyl-cinnamaldehyde due to the high affinity. A series of prochiral activated alkenes were stereoselectively reduced by ClER furnishing the corresponding saturated products in up to 99% ee. The practical applicability of ClER was further evaluated for the production of (R)-levodione, a valuable chiral compound, from ketoisophorone. Using the crude enzyme of ClER and glucose dehydrogenase (GDH), 500 mM of ketoisophorone was efficiently converted to (R)-levodione with excellent stereoselectivity (98% ee) within 1h. All these positive features demonstrate a high synthetic potential of ClER in the asymmetric reduction of activated alkenes.
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Affiliation(s)
- Yan Ni
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Hui-Lei Yu
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China
| | - Guo-Qiang Lin
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
| | - Jian-He Xu
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China.
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27
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Biswas K, Kumar A, Das Sarma K. One-pot high-throughput synthesis of a 160-membered library of methyl 3,5-diaryl-isoxazoline-5-carboxylate pharmacophores by a 2·2·2-component reaction. ACS COMBINATORIAL SCIENCE 2013; 15:255-60. [PMID: 23547927 DOI: 10.1021/co400015w] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A simple and efficient methodology has been developed for the synthesis of methyl 3,5-diaryl-isoxazoline-5-carboxylates in a high-throughput fashion. This was accomplished in one-pot by a sequence of three 2-component reactions steps (2·2·2-CR), whereby compounds were obtained in overall 30-66% isolated yields. The functional group diversity was established by synthesizing a 160-membered library.
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Affiliation(s)
| | - Arvind Kumar
- Jubilant Chemsys Ltd.,
B-34, Sector-58, Noida, UP, India-201301
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28
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Simon RC, Mutti FG, Kroutil W. Biocatalytic synthesis of enantiopure building blocks for pharmaceuticals. DRUG DISCOVERY TODAY. TECHNOLOGIES 2013; 10:e37-e44. [PMID: 24050228 DOI: 10.1016/j.ddtec.2012.08.002] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Biocatalytic transformations have emerged as a viable alternative to other asymmetric chemical methods due to the intrinsic high stereoselectivity of the enzymes and the mild reaction conditions. Just a decade ago, the reaction scope of applicable biotransformations for organic synthesis was limited to a handful of reaction types. Tremendous progress has been made in the meantime so that this review presents only a small selection of the broad range of possible biotransfromations for organic synthesis available today. Lyases (hydroxynitrile lyase, aldolases) and redox enzymes like alcohol dehydrogenases, Baeyer–Villiger monooxygenase, dioxygenases, ene reductases, berberine bridge enzyme and v-transaminases are discussed besides hydrolases.
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29
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Classen T, Pietruszka J, Schuback SM. Revisiting the Enantioselective Sequence Patterns in Enoate Reductases. ChemCatChem 2012. [DOI: 10.1002/cctc.201200668] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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30
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Könst P, Merkens H, Kara S, Kochius S, Vogel A, Zuhse R, Holtmann D, Arends IWCE, Hollmann F. Oxidation von Aldehyden mit Alkoholdehydrogenasen. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201203219] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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31
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Könst P, Merkens H, Kara S, Kochius S, Vogel A, Zuhse R, Holtmann D, Arends IWCE, Hollmann F. Enantioselective oxidation of aldehydes catalyzed by alcohol dehydrogenase. Angew Chem Int Ed Engl 2012; 51:9914-7. [PMID: 22936647 DOI: 10.1002/anie.201203219] [Citation(s) in RCA: 67] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2012] [Revised: 07/12/2012] [Indexed: 11/08/2022]
Abstract
Teaching old dogs new tricks: Alcohol dehydrogenases (ADHs) may be established redox biocatalysts but they still are good for a few surprises. ADHs can be used to oxidize aldehydes, and this was demonstrated by the oxidative dynamic kinetic resolution of profens. In the presence of a suitable cofactor regeneration system, this reaction can occur with high selectivity.
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Affiliation(s)
- Paul Könst
- Department of Biotechnology, Delft University of Technology, Delft, The Netherlands
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