1
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Kaur L, Mandal D. A density functional theory analysis of the C-H activation reactivity of iron(IV)-oxo complexes with an 'O' substituted tetramethylcyclam macrocycle. Dalton Trans 2024; 53:7527-7535. [PMID: 38597582 DOI: 10.1039/d4dt00063c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2024]
Abstract
In this article, we present a meticulous computational study to foresee the effect of an oxygen-rich macrocycle on the reactivity for C-H activation. For this study, a widely studied nonheme Fe(IV)O molecule with a TMC (1,4,8,11-tetramethyl 1,4,8,11-tetraazacyclotetradecane) macrocycle that is equatorially attached to four nitrogen atoms (designated as N4) and acetonitrile as an axial ligand has been taken into account. For the goal of hetero-substitution, step-by-step replacement of the N4 framework with O atoms, i.e., N4, N3O1, N2O2, N1O3, and O4 systems, has been considered, and dihydroanthracene (DHA) has been used as the substrate. In order to neutralise the system and prevent the self-interaction error in DFT, triflate counterions have also been included in the calculations. The study of the energetics of these C-H bond activation reactions and the potential energy surfaces mapped therefore reveal that the initial hydrogen abstraction, which is the rate-determining step, follows the two-state reactivity (TSR) pattern, which means that the originally excited quintet state falls lower in the transition state and the product. The reaction follows the hydrogen atom transfer (HAT) mechanism, as indicated by the spin density studies. The results revealed a fascinating reactivity order, in which the reactivity increases with the enrichment of the oxygen atom in the equatorial position, namely the order follows N4 < N3O1 < N2O2 < N1O3 < O4. The impacts of oxygen substitution on quantum mechanical tunneling and the H/D kinetic isotope effect have also been investigated. When analysing the causes of this reactivity pattern, a number of variables have been identified, including the reactant-like transition structure, spin density distribution, distortion energy, and energies of the electron acceptor orbital, i.e., the energy of the LUMO (σ*z2), which validate the obtained outcome. Our results also show very good agreement with earlier combined experimental and theoretical studies considering TMC and TMCO-type complexes. The DFT predictions reported here will undoubtedly encourage experimental research in this biomimetic field, as they provide an alternative with higher reactivity in which heteroatoms can be substituted for the traditional nitrogen atom.
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Affiliation(s)
- Lovleen Kaur
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala-147004, Punjab, India.
| | - Debasish Mandal
- Department of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala-147004, Punjab, India.
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2
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Farshadfar K, Laasonen K. DFT Mechanistic Investigation into Ni(II)-Catalyzed Hydroxylation of Benzene to Phenol by H 2O 2. Inorg Chem 2024; 63:5509-5519. [PMID: 38471975 PMCID: PMC11186014 DOI: 10.1021/acs.inorgchem.3c04461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/31/2024] [Accepted: 02/28/2024] [Indexed: 03/14/2024]
Abstract
Introduction of oxygen into aromatic C-H bonds is intriguing from both fundamental and practical perspectives. Although the 3d metal-catalyzed hydroxylation of arenes by H2O2 has been developed by several prominent researchers, a definitive mechanism for these crucial transformations remains elusive. Herein, density functional theory calculations were used to shed light on the mechanism of the established hydroxylation reaction of benzene with H2O2, catalyzed by [NiII(tepa)]2+ (tepa = tris[2-(pyridin-2-yl)ethyl]amine). Dinickel(III) bis(μ-oxo) species have been proposed as the key intermediate responsible for the benzene hydroxylation reaction. Our findings indicate that while the dinickel dioxygen species can be generated as a stable structure, it cannot serve as an active catalyst in this transformation. The calculations allowed us to unveil an unprecedented mechanism composed of six main steps as follows: (i) deprotonation of coordinated H2O2, (ii) oxidative addition, (iii) water elimination, (iv) benzene addition, (v) ketone generation, and (vi) tautomerization and regeneration of the active catalyst. Addition of benzene to oxygen, which occurs via a radical mechanism, turns out to be the rate-determining step in the overall reaction. This study demonstrates the critical role of Ni-oxyl species in such transformations, highlighting how the unpaired spin density value on oxygen and positive charges on the Ni-O• complex affect the activation barrier for benzene addition.
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Affiliation(s)
- Kaveh Farshadfar
- Department of Chemistry and
Material Science, School of Chemical Engineering, Aalto University, 02150 Espoo, Finland
| | - Kari Laasonen
- Department of Chemistry and
Material Science, School of Chemical Engineering, Aalto University, 02150 Espoo, Finland
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3
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Choukairi Afailal N, Borrell M, Cianfanelli M, Costas M. Dearomative syn-Dihydroxylation of Naphthalenes with a Biomimetic Iron Catalyst. J Am Chem Soc 2024; 146:240-249. [PMID: 38123164 PMCID: PMC10785824 DOI: 10.1021/jacs.3c08565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2023] [Revised: 11/15/2023] [Accepted: 12/04/2023] [Indexed: 12/23/2023]
Abstract
Arenes are interesting feedstocks for organic synthesis because of their natural abundance. However, the stability conferred by aromaticity severely limits their reactivity, mostly to reactions where aromaticity is retained. Methods for oxidative dearomatization of unactivated arenes are exceedingly rare but particularly valuable because the introduction of Csp3-O bonds transforms the flat aromatic ring in 3D skeletons and confers the oxygenated molecules with a very rich chemistry suitable for diversification. Mimicking the activity of naphthalene dioxygenase (NDO), a non-heme iron-dependent bacterial enzyme, herein we describe the catalytic syn-dihydroxylation of naphthalenes with hydrogen peroxide, employing a sterically encumbered and exceedingly reactive yet chemoselective iron catalyst. The high electrophilicity of hypervalent iron oxo species is devised as a key to enabling overcoming the aromatically promoted kinetic stability. Interestingly, the first dihydroxylation of the arene renders a reactive olefinic site ready for further dihydroxylation. Sequential bis-dihydroxylation of a broad range of naphthalenes provides valuable tetrahydroxylated products in preparative yields, amenable for rapid diversification.
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Affiliation(s)
- Najoua Choukairi Afailal
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Margarida Borrell
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Marco Cianfanelli
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
| | - Miquel Costas
- Institut de Química
Computacional i Catàlisi (IQCC) and Departament de Química, Universitat de Girona, Campus Montilivi, Girona E-17071, Catalonia, Spain
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4
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Ottenbacher RV, Bryliakova AA, Kurganskii VI, Prikhodchenko PV, Medvedev AG, Bryliakov KP. Bioinspired Non-Heme Mn Catalysts for Regio- and Stereoselective Oxyfunctionalizations with H 2 O 2. Chemistry 2023; 29:e202302772. [PMID: 37642264 DOI: 10.1002/chem.202302772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 08/28/2023] [Accepted: 08/29/2023] [Indexed: 08/31/2023]
Abstract
In recent years, metalloenzymes-mediated highly selective oxidations of organic substrates under mild conditions have been inspiration for developing synthetic bioinspired catalyst systems, capable of conducting such processes in the laboratory (and, in the future, in industry), relying on easy-to-handle and environmentally benign oxidants such as H2 O2 . To date, non-heme manganese complexes with chiral bis-amino-bis-pyridylmethyl and structurally related ligands are considered as possessing the highest synthetic potential, having demonstrated the ability to mediate a variety of chemo- and stereoselective oxidative transformations, such as epoxidations, C(sp3 )-H hydroxylations and ketonizations, oxidative desymmetrizations, kinetic resolutions, etc. Furthermore, in the past few years non-heme Mn based catalysts have become the major platform for studies focused on getting insight into the molecular mechanisms of oxidant activation and (stereo)selective oxygen transfer, testing non-traditional hydroperoxide oxidants, engineering catalytic sites with enzyme-like substrate recognition-based selectivity, exploration of catalytic regioselectivity trends in the oxidation of biologically active substrates of natural origin. This contribution summarizes the progress in manganese catalyzed C-H oxygenative transformations of organic substrates, achieved essentially in the past 5 years (late 2018-2023).
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Affiliation(s)
- Roman V Ottenbacher
- Boreskov Institute of Catalysis, Pr. Lavrentieva 5, Novosibirsk, 630090, Russian Federation
| | - Anna A Bryliakova
- Novosibirsk State University, Pirogova 2, Novosibirsk, 630090, Russian Federation
- Zelinsky Institute of Organic Chemistry RAS, Leninsky Pr. 47, Moscow, 119991, Russian Federation
| | - Vladimir I Kurganskii
- Zelinsky Institute of Organic Chemistry RAS, Leninsky Pr. 47, Moscow, 119991, Russian Federation
| | - Petr V Prikhodchenko
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, Moscow, 119991, Russian Federation
| | - Alexander G Medvedev
- Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, Moscow, 119991, Russian Federation
| | - Konstantin P Bryliakov
- Zelinsky Institute of Organic Chemistry RAS, Leninsky Pr. 47, Moscow, 119991, Russian Federation
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5
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Grotemeyer EN, Parham JD, Jackson TA. Reaction landscape of a mononuclear Mn III-hydroxo complex with hydrogen peroxide. Dalton Trans 2023; 52:14350-14370. [PMID: 37767937 DOI: 10.1039/d3dt02672h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
Abstract
Peroxomanganese species have been proposed as key intermediates in the catalytic cycles of both manganese enzymes and synthetic catalysts. However, many of these intermediates have yet to be observed. Here, we report the formation of a series of intermediates, each generated from the reaction of the mononuclear MnIII-hydroxo complex [MnIII(OH)(dpaq2Me)]+ with hydrogen peroxide under slightly different conditions. By changing the acidity of the reaction mixture and/or the quantity of hydrogen peroxide added, we are able to control which intermediate forms. Using a combination of electronic absorption, 1H NMR, EPR, and X-ray absorption spectroscopies, as well as density functional theory (DFT) and complete active space self-consistent field (CASSCF) calculations, we formulate these intermediates as the bis(μ-oxo)dimanganese(III,IV) complex [MnIIIMnIV(μ-O)2(dpaq2Me)2]+, the MnIII-hydroperoxo complex [MnIII(OOH)(dpaq2Me)]+, and the MnIII-peroxo complex [MnIII(O2)(dpaq2Me)]. The formation of the MnIII-hydroperoxo species from the reaction of a MnIII-hydroxo complex with hydrogen peroxide mimics an elementary reaction proposed for many synthetic manganese catalysts that activate hydrogen peroxide.
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Affiliation(s)
- Elizabeth N Grotemeyer
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Joshua D Parham
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Timothy A Jackson
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
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6
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Gao S, Das A, Alfonzo E, Sicinski KM, Rieger D, Arnold FH. Enzymatic Nitrogen Incorporation Using Hydroxylamine. J Am Chem Soc 2023; 145:20196-20201. [PMID: 37671894 PMCID: PMC10560455 DOI: 10.1021/jacs.3c08053] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2023]
Abstract
Hydroxylamine-derived reagents have enabled versatile nitrene transfer reactions for introducing nitrogen-containing functionalities in small-molecule catalysis, as well as biocatalysis. These reagents, however, result in a poor atom economy and stoichiometric organic waste. Activating hydroxylamine (NH2OH) for nitrene transfer offers a low-cost and sustainable route to amine synthesis, since water is the sole byproduct. Despite its presence in nature, hydroxylamine is not known to be used for enzymatic nitrogen incorporation in biosynthesis. Here, we report an engineered heme enzyme that can utilize hydroxylammonium chloride, an inexpensive commodity chemical, for nitrene transfer. Directed evolution of Pyrobaculum arsenaticum protoglobin generated efficient enzymes for benzylic C-H primary amination and styrene aminohydroxylation. Mechanistic studies supported a stepwise radical pathway involving rate-limiting hydrogen atom transfer. This unprecedented activity is a useful addition to the "nitrene transferase" repertoire and hints at possible future discovery of natural enzymes that use hydroxylamine for amination chemistry.
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Affiliation(s)
- Shilong Gao
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Anuvab Das
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Edwin Alfonzo
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Kathleen M. Sicinski
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Dominic Rieger
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Frances H. Arnold
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
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7
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Palone A, Casadevall G, Ruiz-Barragan S, Call A, Osuna S, Bietti M, Costas M. C-H Bonds as Functional Groups: Simultaneous Generation of Multiple Stereocenters by Enantioselective Hydroxylation at Unactivated Tertiary C-H Bonds. J Am Chem Soc 2023; 145:15742-15753. [PMID: 37431886 PMCID: PMC10651061 DOI: 10.1021/jacs.2c10148] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Indexed: 07/12/2023]
Abstract
Enantioselective C-H oxidation is a standing chemical challenge foreseen as a powerful tool to transform readily available organic molecules into precious oxygenated building blocks. Here, we describe a catalytic enantioselective hydroxylation of tertiary C-H bonds in cyclohexane scaffolds with H2O2, an evolved manganese catalyst that provides structural complementary to the substrate similarly to the lock-and-key recognition operating in enzymatic active sites. Theoretical calculations unveil that enantioselectivity is governed by the precise fitting of the substrate scaffold into the catalytic site, through a network of complementary weak non-covalent interactions. Stereoretentive C(sp3)-H hydroxylation results in a single-step generation of multiple stereogenic centers (up to 4) that can be orthogonally manipulated by conventional methods providing rapid access, from a single precursor to a variety of chiral scaffolds.
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Affiliation(s)
- Andrea Palone
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
| | - Guillem Casadevall
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
| | - Sergi Ruiz-Barragan
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
| | - Arnau Call
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
| | - Sílvia Osuna
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
- ICREA, Pg. Lluís Companys 23, Barcelona 08010, Spain
| | - Massimo Bietti
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
| | - Miquel Costas
- Institut
de Química Computacional i Catàlisi (IQCC) and Departament
de Química, Universitat de Girona, Campus Montilivi, Girona, Catalonia E-17071, Spain
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8
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Docherty JH, Lister TM, Mcarthur G, Findlay MT, Domingo-Legarda P, Kenyon J, Choudhary S, Larrosa I. Transition-Metal-Catalyzed C-H Bond Activation for the Formation of C-C Bonds in Complex Molecules. Chem Rev 2023. [PMID: 37163671 DOI: 10.1021/acs.chemrev.2c00888] [Citation(s) in RCA: 48] [Impact Index Per Article: 48.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Site-predictable and chemoselective C-H bond functionalization reactions offer synthetically powerful strategies for the step-economic diversification of both feedstock and fine chemicals. Many transition-metal-catalyzed methods have emerged for the selective activation and functionalization of C-H bonds. However, challenges of regio- and chemoselectivity have emerged with application to highly complex molecules bearing significant functional group density and diversity. As molecular complexity increases within molecular structures the risks of catalyst intolerance and limited applicability grow with the number of functional groups and potentially Lewis basic heteroatoms. Given the abundance of C-H bonds within highly complex and already diversified molecules such as pharmaceuticals, natural products, and materials, design and selection of reaction conditions and tolerant catalysts has proved critical for successful direct functionalization. As such, innovations within transition-metal-catalyzed C-H bond functionalization for the direct formation of carbon-carbon bonds have been discovered and developed to overcome these challenges and limitations. This review highlights progress made for the direct metal-catalyzed C-C bond forming reactions including alkylation, methylation, arylation, and olefination of C-H bonds within complex targets.
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Affiliation(s)
- Jamie H Docherty
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Thomas M Lister
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Gillian Mcarthur
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Michael T Findlay
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Pablo Domingo-Legarda
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Jacob Kenyon
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Shweta Choudhary
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Igor Larrosa
- School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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9
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An J, Guan J, Nie Y. Semi-Rational Design of L-Isoleucine Dioxygenase Generated Its Activity for Aromatic Amino Acid Hydroxylation. Molecules 2023; 28:3750. [PMID: 37175159 PMCID: PMC10180240 DOI: 10.3390/molecules28093750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2023] [Revised: 04/15/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023] Open
Abstract
Fe (II)-and 2-ketoglutarate-dependent dioxygenases (Fe (II)/α-KG DOs) have been applied to catalyze hydroxylation of amino acids. However, the Fe (II)/α-KG DOs that have been developed and characterized are not sufficient. L-isoleucine dioxygenase (IDO) is an Fe (II)/α-KG DO that specifically catalyzes the formation of 4-hydroxyisoleucine (4-HIL) from L-isoleucine (L-Ile) and exhibits a substrate specificity toward L-aliphatic amino acids. To expand the substrate spectrum of IDO toward aromatic amino acids, in this study, we analyzed the regularity of the substrate spectrum of IDO using molecular dynamics (MD) simulation and found that the distance between Fe2+, C2 of α-KG and amino acid chain's C4 may be critical for regulating the substrate specificity of the enzyme. The mutation sites (Y143, S153 and R227) were also subjected to single point saturation mutations based on polarity pockets and residue free energy contributions. It was found that Y143D, Y143I and S153A mutants exhibited catalytic L-phenylalanine activity, while Y143I, S153A, S153Q and S153Y exhibited catalytic L-homophenylalanine activity. Consequently, this study extended the substrate spectrum of IDO with aromatic amino acids and enhanced its application property.
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Affiliation(s)
- Jianhong An
- School of Biotechnology and Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, 1800 Lihu Road, Wuxi 214122, China; (J.A.); (J.G.)
- International Joint Research Laboratory for Brewing Microbiology and Applied Enzymology, Jiangnan University, 1800 Lihu Road, Wuxi 214122, China
- Eye Hospital, Wenzhou Medical University, 270 Xueyuan Road, Wenzhou 325000, China
| | - Jiaojiao Guan
- School of Biotechnology and Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, 1800 Lihu Road, Wuxi 214122, China; (J.A.); (J.G.)
| | - Yao Nie
- School of Biotechnology and Key Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, 1800 Lihu Road, Wuxi 214122, China; (J.A.); (J.G.)
- International Joint Research Laboratory for Brewing Microbiology and Applied Enzymology, Jiangnan University, 1800 Lihu Road, Wuxi 214122, China
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10
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Bio-Inspired Iron Pentadentate Complexes as Dioxygen Activators in the Oxidation of Cyclohexene and Limonene. Molecules 2023; 28:molecules28052240. [PMID: 36903486 PMCID: PMC10004738 DOI: 10.3390/molecules28052240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 02/24/2023] [Accepted: 02/25/2023] [Indexed: 03/04/2023] Open
Abstract
The use of dioxygen as an oxidant in fine chemicals production is an emerging problem in chemistry for environmental and economical reasons. In acetonitrile, the [(N4Py)FeII]2+ complex, [N4Py-N,N-bis(2-pyridylmethyl)-N-(bis-2-pyridylmethyl)amine] in the presence of the substrate activates dioxygen for the oxygenation of cyclohexene and limonene. Cyclohexane is oxidized mainly to 2-cyclohexen-1-one, and 2-cyclohexen-1-ol, cyclohexene oxide is formed in much smaller amounts. Limonene gives as the main products limonene oxide, carvone, and carveol. Perillaldehyde and perillyl alcohol are also present in the products but to a lesser extent. The investigated system is twice as efficient as the [(bpy)2FeII]2+/O2/cyclohexene system and comparable to the [(bpy)2MnII]2+/O2/limonene system. Using cyclic voltammetry, it has been shown that, when the catalyst, dioxgen, and substrate are present simultaneously in the reaction mixture, the iron(IV) oxo adduct [(N4Py)FeIV=O]2+ is formed, which is the oxidative species. This observation is supported by DFT calculations.
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11
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Monika, Sarkar A, Karmodak N, Dhar BB, Adhikari S. Bio-inspired Cu(II) amido-quinoline complexes as catalysts for aromatic C-H bond hydroxylation. Dalton Trans 2023; 52:540-545. [PMID: 36537082 DOI: 10.1039/d2dt03242b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Cu(II) complexes supported by tetradentate amido-quinoline acyclic ligands (L1 & L2) have been synthesized, characterized, and employed as catalysts for aromatic C-H hydroxylation using H2O2 as an oxidant in the absence of an external base with a high selectivity of around 90% for phenols via the non-radical pathway (TON ≥720). The KIE value, various spectroscopic studies and DFT calculation supported the involvement of Cu(II)-OOH species.
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Affiliation(s)
- Monika
- Department of Chemistry, Shiv Nadar IoE, U.P. 201314, India.
| | - Aniruddha Sarkar
- Department of Chemical Sciences, IISER Kolkata, Mohanpur 741246, India
| | | | | | - Sanjay Adhikari
- Faculty of Basic and Applied Sciences, Madhav University, Rajasthan 307026, India
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12
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Li Z, Park HS, Qiao JX, Yeung KS, Yu JQ. Ligand-Enabled C-H Hydroxylation with Aqueous H 2O 2 at Room Temperature. J Am Chem Soc 2022; 144:18109-18116. [PMID: 36137252 PMCID: PMC10292862 DOI: 10.1021/jacs.2c08332] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
With the large number of Pd(II)-catalyzed C-H activation reactions of native substrates developed in the past decade, the development of catalysts to enable the use of green oxidants under safe and practical conditions has become an increasingly important challenge. Notably, the compatibility of Pd(II) catalysts with sustainable aqueous H2O2 has been a long-standing challenge in catalysis including Wacker-type oxidations. We report herein a bifunctional bidentate carboxyl-pyridone (CarboxPyridone) ligand that enables room-temperature Pd-catalyzed C-H hydroxylation of a broad range of benzoic and phenylacetic acids with an industry-compatible oxidant, aqueous hydrogen peroxide (35% H2O2). The scalability of this methodology is demonstrated by a 1000 mmol scale reaction of ibuprofen (206 g) using only a 1 mol % Pd catalyst loading. The utility of this protocol is further illustrated through derivatization of the products and synthesis of polyfluorinated natural product coumestan and pterocarpene from phenol intermediates prepared using this methodology.
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Affiliation(s)
- Zhen Li
- The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, California 92037, USA
| | - Han Seul Park
- The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, California 92037, USA
| | - Jennifer X. Qiao
- Small Molecule Drug Discovery, Bristol Myers Squibb Research and Early Development, PO Box 4000, Princeton, NJ 08543, USA
| | - Kap-Sun Yeung
- Small Molecule Drug Discovery, Bristol Myers Squibb Research and Early Development, 100 Binney Street, Cambridge, MA 02142, USA
| | - Jin-Quan Yu
- The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, California 92037, USA
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13
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Kaur L, Mandal D. Role of "S" Substitution on C-H Activation Reactivity of Iron(IV)-Oxo Cyclam Complexes: a Computational Investigation. Inorg Chem 2022; 61:14582-14590. [PMID: 36069431 DOI: 10.1021/acs.inorgchem.2c01504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A comprehensive density functional theory (DFT) investigation has been presented in this article to address the role of equatorial sulfur ligation in C-H activation. A non-heme iron-oxo compound with four nitrogen atoms constituting the equatorially connected macrocyclic framework (represented as N4) [Fe(IV)═O(THC)(CH3CN)]2+(THC = 1,4,8,11-tetrahydro1,4,8,11-tetraazacyclotetradecane) has been considered as the base compound. Other complexes have been anticipated by the sequential replacement of this nitrogen by sulfur, that is, N4, N3S1, N2S2, N1S3, and S4. Counterions, as always, have been considered to avoid the self-interaction error in DFT. Generally, the anti-conformers (with respect to equatorial N-H and Fe═O) turned out to be the most stable. It was found that with the enrichment of the equatorial sulfur atom, reactivity increases successively, that is, we get the trend N4 < N3S1 < N2S2 < N1S3 < S4. Our investigations have also verified the available experimental results where it has been reported that N2S2 is more reactive than N4 in their mixed conformation. In search of insights into this typical pattern of reactivity, the interplay of several factors has been recognized, such as the distortion energy which decreases for the transition states with the addition of sulfur; the spin density on the oxygen atom which increases implying that the radical character of abstractor increases on sulfur ligation; the energy of the electron acceptor orbital (the lowest unoccupied molecular orbital (σz2*)) which decreases continuously with the sulfur substitution; and the triplet-quintet oxidant energy gap which decreases consistently with S enrichment in the equatorial position. The computational predictions reported here, if further validated by experiments, will definitely encourage the synthesis of sulfur-ligated bio-inspired complexes instead of the ones constituting nitrogen exclusively.
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Affiliation(s)
- Lovleen Kaur
- School of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala 147004, Punjab, India
| | - Debasish Mandal
- School of Chemistry and Biochemistry, Thapar Institute of Engineering and Technology, Patiala 147004, Punjab, India
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14
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Rajeev A, Balamurugan M, Sankaralingam M. Rational Design of First-Row Transition Metal Complexes as the Catalysts for Oxidation of Arenes: A Homogeneous Approach. ACS Catal 2022. [DOI: 10.1021/acscatal.2c01928] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Anjana Rajeev
- Bioinspired & Biomimetic Inorganic Chemistry Lab, Department of Chemistry, National Institute of Technology Calicut, Kozhikode, Kerala 673601, India
| | - Mani Balamurugan
- Department of Materials Science and Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Republic of Korea
| | - Muniyandi Sankaralingam
- Bioinspired & Biomimetic Inorganic Chemistry Lab, Department of Chemistry, National Institute of Technology Calicut, Kozhikode, Kerala 673601, India
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15
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Qi H, Xu D, Lin J, Sun W. Copper-catalyzed direct hydroxylation of arenes to phenols with hydrogen peroxide. MOLECULAR CATALYSIS 2022. [DOI: 10.1016/j.mcat.2022.112441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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16
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Han J, Tan L, Wan Y, Li G, Anderson SN. C(sp 3)-H oxidation and chlorination catalysed by a bioinspired pincer iron(III) complex. Dalton Trans 2022; 51:11620-11624. [PMID: 35895115 DOI: 10.1039/d2dt02005j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A pincer iron(III) catalyst for the oxidation and chlorination of C(sp3)-H bonds was developed. Oxidation of a diagnostic substrate cis-decalin implies that a long-lived carbon-centred radical is involved. Mechanistic studies suggest that an Fe-oxo species could be responsible for the rate-determining C-H activation step. This report expands the scope of non-heme catalysts for C-H functionalisation.
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Affiliation(s)
- Jian Han
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, 84322, USA.
| | - Liming Tan
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, 84322, USA.
| | - Yanjun Wan
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, 84322, USA.
| | - Gang Li
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, 84322, USA.
| | - Stephen N Anderson
- Department of Chemistry and Biochemistry, Utah State University, Logan, Utah, 84322, USA.
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17
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Zhou J, Jia M, Song M, Huang Z, Steiner A, An Q, Ma J, Guo Z, Zhang Q, Sun H, Robertson C, Bacsa J, Xiao J, Li C. Chemoselective Oxyfunctionalization of Functionalized Benzylic Compounds with a Manganese Catalyst. Angew Chem Int Ed Engl 2022; 61:e202205983. [PMID: 35594169 PMCID: PMC9400980 DOI: 10.1002/anie.202205983] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Indexed: 11/06/2022]
Abstract
Whilst allowing for easy access to synthetically versatile motifs and for modification of bioactive molecules, the chemoselective benzylic oxidation reactions of functionalized alkyl arenes remain challenging. Reported in this study is a new non-heme Mn catalyst stabilized by a bipiperidine-based tetradentate ligand, which enables methylene oxidation of benzylic compounds by H2 O2 , showing high activity and excellent chemoselectivity under mild conditions. The protocol tolerates an unprecedentedly wide range of functional groups, including carboxylic acid and derivatives, ketone, cyano, azide, acetate, sulfonate, alkyne, amino acid, and amine units, thus providing a low-cost, more sustainable and robust pathway for the facile synthesis of ketones, increase of complexity of organic molecules, and late-stage modification of drugs.
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Affiliation(s)
- Jimei Zhou
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Minxian Jia
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Menghui Song
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Zhiliang Huang
- Department of ChemistryUniversity of LiverpoolLiverpoolL69 7ZDUK
| | | | - Qidong An
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Jianwei Ma
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Zhiyin Guo
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Qianqian Zhang
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Huaming Sun
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
| | - Craig Robertson
- Department of ChemistryUniversity of LiverpoolLiverpoolL69 7ZDUK
| | - John Bacsa
- Department of ChemistryEmory University1515 Dickey Dr.AtlantaGA 30322USA
| | - Jianliang Xiao
- Department of ChemistryUniversity of LiverpoolLiverpoolL69 7ZDUK
| | - Chaoqun Li
- Key Laboratory of Applied Surface and Colloid ChemistryMinistry of Education and School of Chemistry and Chemical EngineeringShaanxi Normal UniversityXi'an710119China
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18
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Zhou J, Jia M, Song M, Huang Z, Steiner A, An Q, Ma J, Guo Z, Zhang Q, Sun H, Robertson CM, Bacsa J, Xiao J, Li C. Chemoselective Oxyfunctionalization of Functionalized Benzylic Compounds with a Manganese Catalyst. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202205983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Jimei Zhou
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an CHINA
| | - Minxian Jia
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Menghui Song
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Zhiliang Huang
- University of Liverpool Department of Chemistry UNITED KINGDOM
| | | | - Qidong An
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Jianwei Ma
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Zhiyin Guo
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Qianqian Zhang
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | - Huaming Sun
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an UNITED KINGDOM
| | | | - John Bacsa
- Emory University Department of Chemistry UNITED KINGDOM
| | - Jianliang Xiao
- University of Liverpool Department of Chemistry Oxford Street L69 7ZD Liverpool UNITED KINGDOM
| | - Chaoqun Li
- Shaanxi Normal University School of Chemistry & Chemical Engineering Xi'an CHINA
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19
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Zhu R, Sun Q, Li J, Li L, Gao Q, Wang Y, Fang L. para-Selective hydroxylation of alkyl aryl ethers. Chem Commun (Camb) 2021; 57:13190-13193. [PMID: 34816833 DOI: 10.1039/d1cc06210g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
para-Selective hydroxylation of alkyl aryl ethers is established, which proceeds with a ruthenium(II) catalyst, hypervalent iodine(III) and trifluoroacetic anhydride via a radical mechanism. This protocol tolerates a wide scope of substrates and provides a facile and efficient method for preparing clinical drugs monobenzone and pramocaine on a gram scale.
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Affiliation(s)
- Runqing Zhu
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Qianqian Sun
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Jing Li
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Luohao Li
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Qinghe Gao
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Yakun Wang
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
| | - Lizhen Fang
- School of Pharmacy, Xinxiang Medical University, Xinxiang, Henan 453003, People's Republic of China.
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20
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Masferrer-Rius E, Li F, Lutz M, Klein Gebbink RJM. Exploration of highly electron-rich manganese complexes in enantioselective oxidation catalysis; a focus on enantioselective benzylic oxidation. Catal Sci Technol 2021. [DOI: 10.1039/d1cy01642c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The development of highly electron-rich manganese complexes for enantioselective benzylic oxidation (and asymmetric epoxidation) is described, to provide chiral benzylic alcohols and epoxides in good yields and enantioselectivites.
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Affiliation(s)
- Eduard Masferrer-Rius
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
| | - Fanshi Li
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
| | - Martin Lutz
- Structural Biochemistry, Bijvoet Centre for Biomolecular Research, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
| | - Robertus J. M. Klein Gebbink
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands
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