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Kaupp M, Schattenberg CJ, Müller R, Reimann M. Unusually Large Effects of Charge-assisted C-H⋅⋅⋅F Hydrogen Bonds to Anionic Fluorine in Organic Solvents: Computational Study of 19 F NMR Shifts versus Thermochemistry. Chemistry 2022; 11:e202200146. [PMID: 35984672 PMCID: PMC9716039 DOI: 10.1002/open.202200146] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 07/26/2022] [Indexed: 01/31/2023]
Abstract
A comparison of computed 19 F NMR chemical shifts and experiment provides evidence for large specific solvent effects for fluoride-type anions interacting with the σ*(C-H) orbitals in organic solvents like MeCN or CH2 Cl2 . We show this for systems ranging from the fluoride ion and the bifluoride ion [FHF]- to polyhalogen anions [ClFx ]- . Discrepancies between computed and experimental shifts when using continuum solvent models like COSMO or force-field-based descriptions like the 3D-RISM-SCF model show specific orbital interactions that require a quantum-mechanical treatment of the solvent molecules. This is confirmed by orbital analyses of the shielding constants, while less negatively charged fluorine atoms (e. g., in [EF4 ]- ) do not require such quantum-mechanical treatments to achieve reasonable accuracy. The larger 19 F solvent shift of fluoride in MeCN compared to water is due to the larger coordination number in the former. These observations are due to unusually strong charge-assisted C-H⋅⋅⋅F- hydrogen bonds, which manifest beyond some threshold negative natural charge on fluorine of ca. < -0.6 e. The interactions are accompanied by sizable free energies of solvation, in the order F- ≫[FHF]- >[ClF2 ]- >[ClF4 ]- . COSMO-RS solvation free energies tend to moderately underestimate those from the micro-solvated cluster treatment. Red-shifted and intense vibrational C-H stretching bands, potentially accessible in bulk solution, are further spectroscopic finger prints.
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Affiliation(s)
- Martin Kaupp
- Technische Universität BerlinInstitut für Chemie, Theoretische Chemie/QuantenchemieSekr. C7, Strasse des 17. Juni 13510623BerlinGermany
| | - Caspar J. Schattenberg
- Technische Universität BerlinInstitut für Chemie, Theoretische Chemie/QuantenchemieSekr. C7, Strasse des 17. Juni 13510623BerlinGermany
| | - Robert Müller
- Technische Universität BerlinInstitut für Chemie, Theoretische Chemie/QuantenchemieSekr. C7, Strasse des 17. Juni 13510623BerlinGermany
| | - Marc Reimann
- Technische Universität BerlinInstitut für Chemie, Theoretische Chemie/QuantenchemieSekr. C7, Strasse des 17. Juni 13510623BerlinGermany
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2
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Kiesilä A, Kivijärvi L, Beyeh NK, Moilanen JO, Groessl M, Rothe T, Götz S, Topić F, Rissanen K, Lützen A, Kalenius E. Simultane endo
- und exo
-Komplexbildung von Pyridin[4]aren-Dimeren mit neutralen und anionischen Gästen. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201704054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Anniina Kiesilä
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
| | - Lauri Kivijärvi
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
| | - Ngong Kodiah Beyeh
- Aalto University; School of Science; Department of Applied Physics; Puumiehenkuja 2 02150 Espoo Finnland
| | - Jani O. Moilanen
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
| | | | - Tatiana Rothe
- Universität Bonn; Kekulé-Institut für Organische Chemie und Biochemie; Gerhard-Domagk-Str. 1 53121 Bonn Deutschland
| | - Sven Götz
- Universität Bonn; Kekulé-Institut für Organische Chemie und Biochemie; Gerhard-Domagk-Str. 1 53121 Bonn Deutschland
| | - Filip Topić
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
| | - Kari Rissanen
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
| | - Arne Lützen
- Universität Bonn; Kekulé-Institut für Organische Chemie und Biochemie; Gerhard-Domagk-Str. 1 53121 Bonn Deutschland
| | - Elina Kalenius
- University of Jyväskylä; Department of Chemistry; Nanoscience Center; P.O. Box 35 40014 Jyväskylä Finnland
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3
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Kiesilä A, Kivijärvi L, Beyeh NK, Moilanen JO, Groessl M, Rothe T, Götz S, Topić F, Rissanen K, Lützen A, Kalenius E. Simultaneous endo and exo Complex Formation of Pyridine[4]arene Dimers with Neutral and Anionic Guests. Angew Chem Int Ed Engl 2017; 56:10942-10946. [PMID: 28665506 DOI: 10.1002/anie.201704054] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Revised: 06/01/2017] [Indexed: 11/06/2022]
Abstract
The formation of complexes between hexafluorophosphate (PF6- ) and tetraisobutyloctahydroxypyridine[4]arene has been thoroughly studied in the gas phase (ESI-QTOF-MS, IM-MS, DFT calculations), in the solid state (X-ray crystallography), and in chloroform solution (1 H, 19 F, and DOSY NMR spectroscopy). In all states of matter, simultaneous endo complexation of solvent molecules and exo complexation of a PF6- anion within a pyridine[4]arene dimer was observed. While similar ternary complexes are often observed in the solid state, this is a unique example of such behavior in the gas phase.
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Affiliation(s)
- Anniina Kiesilä
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
| | - Lauri Kivijärvi
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
| | - Ngong Kodiah Beyeh
- Aalto University, School of Science, Department of Applied Physics, Puumiehenkuja 2, 02150, Espoo, Finland
| | - Jani O Moilanen
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
| | | | - Tatiana Rothe
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Strasse 1, 53121, Bonn, Germany
| | - Sven Götz
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Strasse 1, 53121, Bonn, Germany
| | - Filip Topić
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
| | - Kari Rissanen
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
| | - Arne Lützen
- University of Bonn, Kekulé-Institute of Organic Chemistry and Biochemistry, Gerhard-Domagk-Strasse 1, 53121, Bonn, Germany
| | - Elina Kalenius
- University of Jyväskylä, Department of Chemistry, Nanoscience Center, P.O. Box 35, 40014, Jyväskylä, Finland
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4
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Grunenberg J. The Weakness of B−H⋅⋅⋅π Interactions: Much Softer than a Hydrogen Bond. Chemistry 2016; 22:18678-18681. [DOI: 10.1002/chem.201603535] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2016] [Indexed: 11/11/2022]
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5
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Majewski MA, Hong Y, Lis T, Gregoliński J, Chmielewski PJ, Cybińska J, Kim D, Stępień M. Octulene: A Hyperbolic Molecular Belt that Binds Chloride Anions. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201608384] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Marcin A. Majewski
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Yongseok Hong
- Department of Chemistry; Yonsei University; 50 Yonsei-ro Seoul 120-749 Korea
| | - Tadeusz Lis
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Janusz Gregoliński
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Piotr J. Chmielewski
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Joanna Cybińska
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
| | - Dongho Kim
- Department of Chemistry; Yonsei University; 50 Yonsei-ro Seoul 120-749 Korea
| | - Marcin Stępień
- Wydział Chemii; Uniwersytet Wrocławski; ul. F. Joliot-Curie 14 50-383 Wrocław Poland
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Majewski MA, Hong Y, Lis T, Gregoliński J, Chmielewski PJ, Cybińska J, Kim D, Stępień M. Octulene: A Hyperbolic Molecular Belt that Binds Chloride Anions. Angew Chem Int Ed Engl 2016; 55:14072-14076. [PMID: 27709735 DOI: 10.1002/anie.201608384] [Citation(s) in RCA: 77] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2016] [Indexed: 12/14/2022]
Abstract
Octulene, the higher homologue of kekulene and septulene, was synthesized using the fold-in method. This new hydrocarbon macrocycle contains a large 24-membered inner circuit, which is peripherally fused to 24 benzene rings. Such an arrangement produces considerable hyperbolic distortion of the π-conjugated surface. The consequences of distortion in octulene were explored using photophysical methods, which revealed a reduced electronic band gap and greater flexibility of the π system. Octulene contains a functional cavity with a diameter larger than 5.5 Å that is capable of efficiently binding the chloride anion in a nonpolar solvent (Ka = 2.2(4)×104 m-1 , 1 % dichloromethane (DCM) in benzene). The octulene-chloride interaction is stabilized by eight weak C(sp2 )H⋅⋅⋅Cl bonds, providing the first example of a hydrocarbon-based anion receptor.
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Affiliation(s)
- Marcin A Majewski
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Yongseok Hong
- Department of Chemistry, Yonsei University, 50 Yonsei-ro, Seoul, 120-749, Korea
| | - Tadeusz Lis
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Janusz Gregoliński
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Piotr J Chmielewski
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Joanna Cybińska
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland
| | - Dongho Kim
- Department of Chemistry, Yonsei University, 50 Yonsei-ro, Seoul, 120-749, Korea.
| | - Marcin Stępień
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383, Wrocław, Poland.
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7
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Chavagnan T, Sémeril D, Matt D, Harrowfield J, Toupet L. Cracking cavitands: metal-directed scission of phosphinyl-substituted resorcinarenes. Chemistry 2015; 21:6678-81. [PMID: 25801729 DOI: 10.1002/chem.201500177] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2015] [Indexed: 11/06/2022]
Abstract
Resorcinarene-derived tetramethylene cavitands bearing a diphenylphosphino group grafted to their wider rim undergo facile, directed C-O bond breaking upon reaction with transition-metal ions in the presence of nucleophiles. One possible reaction mechanism involves formation of a P,O-chelate complex, which weakens the adjacent O-CH2 bond, leading to the formation of an oxacarbenium intermediate.
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Affiliation(s)
- Thierry Chavagnan
- Laboratoire de Chimie Inorganique Moléculaire et Catalyse, Institut de Chimie UMR 7177 CNRS-Université de Strasbourg, 4 rue Blaise Pascal, 67070 Strasbourg cedex (France)
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8
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Jeremies A, Lehmann U, Gruschinski S, Schleife F, Meyer M, Matulis V, Ivashkevich OA, Handke M, Stein K, Kersting B. Cavitands Incorporating a Lewis Acid Dinickel Chelate Function as Receptors for Halide Anions. Inorg Chem 2015; 54:3937-50. [DOI: 10.1021/acs.inorgchem.5b00123] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Alexander Jeremies
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Ulrike Lehmann
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Sina Gruschinski
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Frederik Schleife
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Michel Meyer
- Institut de Chimie Moléculaire de
l’Université de Bourgogne (ICMUB), UMR CNRS 6302, 9, avenue
Alain Savary, BP 47870, 21078 Dijon Cedex, France
| | - Vitaly Matulis
- Research
Institute for Physical Chemical Problems, Belarusian State University, Leningradskaya 14, 220030 Minsk, Belarus
| | | | - Marcel Handke
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Karolin Stein
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
| | - Berthold Kersting
- Institut für
Anorganische Chemie, Universität Leipzig, Johannisallee
29, 04103 Leipzig, Germany
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9
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Rest C, Mayoral MJ, Fucke K, Schellheimer J, Stepanenko V, Fernández G. Self-Assembly and (Hydro)gelation Triggered by Cooperative π-π and Unconventional CH⋅⋅⋅X Hydrogen Bonding Interactions. Angew Chem Int Ed Engl 2013; 53:700-5. [DOI: 10.1002/anie.201307806] [Citation(s) in RCA: 114] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2013] [Revised: 10/14/2013] [Indexed: 11/10/2022]
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10
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Rest C, Mayoral MJ, Fucke K, Schellheimer J, Stepanenko V, Fernández G. Selbstorganisation und Bildung von (Hydro-)Gelen durch kooperative π-π-Wechselwirkungen und unkonventionelle C-H⋅⋅⋅X-Wasserstoffbrücken. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201307806] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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11
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Morales D, Puerto M, del Río I, Pérez J, López R. Interaction between Anions and Molybdenum Allyl Dicarbonyl Complexes of 1,4,7-Trithiacyclononane. Chemistry 2012; 18:16186-95. [DOI: 10.1002/chem.201201327] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2012] [Revised: 07/04/2012] [Indexed: 11/12/2022]
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12
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Dutta R, Ghosh P. Encapsulation of Fluoride/Chloride in the C3v-Symmetric Cleft of a Pentafluorophenyl-Functionalized Cyanuric Acid Platform Based Tripodal Amide: Solid and Solution-State Anion-Binding Studies. Eur J Inorg Chem 2012. [DOI: 10.1002/ejic.201200074] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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13
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Gushchin PV, Kuznetsov ML, Wang Q, Karasik AA, Haukka M, Starova GL, Kukushkin VY. Lasagna-type arrays with halide–nitromethane cluster filling. The first recognition of the Hal−⋯HCH2NO2 (Hal = Cl, Br, I) hydrogen bonding. Dalton Trans 2012; 41:6922-31. [PMID: 22441435 DOI: 10.1039/c2dt12394k] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Pavel V Gushchin
- Department of Chemistry, St. Petersburg State University, 198504 Stary Petergof, Russian Federation
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14
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Ramabhadran RO, Hua Y, Li YJ, Flood AH, Raghavachari K. From Atomic to Molecular Anions: A Neutral Receptor Captures Cyanide Using Strong CH Hydrogen Bonds. Chemistry 2011; 17:9123-9. [DOI: 10.1002/chem.201100793] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2011] [Indexed: 01/22/2023]
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15
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Affiliation(s)
- Jan Svec
- Department of Chemistry, Masaryk University, Kotlarska 2, 611 37 Brno, Czech Republic
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Tancini F, Gottschalk T, Schweizer W, Diederich F, Dalcanale E. Ion-Pair Complexation with a Cavitand Receptor. Chemistry 2010; 16:7813-9. [DOI: 10.1002/chem.201000573] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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17
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18
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Bandyopadhyay I, Raghavachari K, Flood AH. Strong CH⋅⋅⋅Halide Hydrogen Bonds from 1,2,3-Triazoles Quantified Using Pre-Organized and Shape-Persistent Triazolophanes. Chemphyschem 2009; 10:2535-40. [DOI: 10.1002/cphc.200900476] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Abstract
Supramolecular chemistry has expanded dramatically in recent years both in terms of potential applications and in its relevance to analogous biological systems. The formation and function of supramolecular complexes occur through a multiplicity of often difficult to differentiate noncovalent forces. The aim of this Review is to describe the crucial interaction mechanisms in context, and thus classify the entire subject. In most cases, organic host-guest complexes have been selected as examples, but biologically relevant problems are also considered. An understanding and quantification of intermolecular interactions is of importance both for the rational planning of new supramolecular systems, including intelligent materials, as well as for developing new biologically active agents.
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Affiliation(s)
- Hans-Jörg Schneider
- Organische Chemie, Universität des Saarlandes, 66041 Saarbrücken, Deutschland.
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20
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Christoph A. Schalley. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/anie.200901067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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22
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Christoph A. Schalley. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200901067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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24
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Stoll I, Brodbeck R, Wiegmann S, Eberhard J, Kerruth S, Neumann B, Stammler HG, Mattay J. New Fluorescent Calix Crown Ethers, Part II: Synthesis and Complex Formation in Solution and the Solid State. European J Org Chem 2008. [DOI: 10.1002/ejoc.200800569] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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25
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Yoon DW, Gross DE, Lynch VM, Sessler JL, Hay BP, Lee CH. Benzene-, pyrrole-, and furan-containing diametrically strapped calix[4]pyrroles--an experimental and theoretical study of hydrogen-bonding effects in chloride anion recognition. Angew Chem Int Ed Engl 2008; 47:5038-42. [PMID: 18512217 DOI: 10.1002/anie.200801426] [Citation(s) in RCA: 122] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Dae-Wi Yoon
- Department of Chemistry and Biochemistry, The University of Texas at Austin, Austin, TX 78712, USA
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26
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Yoon DW, Gross D, Lynch V, Sessler J, Hay B, Lee CH. Benzene-, Pyrrole-, and Furan-Containing Diametrically Strapped Calix[4]pyrroles-An Experimental and Theoretical Study of Hydrogen-Bonding Effects in Chloride Anion Recognition. Angew Chem Int Ed Engl 2008. [DOI: 10.1002/ange.200801426] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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