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Meredith NY, Borsley S, Smolyar IV, Nichol GS, Baker CM, Ling KB, Cockroft SL. Dissecting Solvent Effects on Hydrogen Bonding. Angew Chem Int Ed Engl 2022; 61:e202206604. [PMID: 35608961 PMCID: PMC9400978 DOI: 10.1002/anie.202206604] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Indexed: 12/26/2022]
Abstract
The experimental isolation of H-bond energetics from the typically dominant influence of the solvent remains challenging. Here we use synthetic molecular balances to quantify amine/amide H-bonds in competitive solvents. Over 200 conformational free energy differences were determined using 24 H-bonding balances in 9 solvents spanning a wide polarity range. The correlations between experimental interaction energies and gas-phase computed energies exhibited wild solvent-dependent variation. However, excellent correlations were found between the same computed energies and the experimental data following empirical dissection of solvent effects using Hunter's α/β solvation model. In addition to facilitating the direct comparison of experimental and computational data, changes in the fitted donor and acceptor constants reveal the energetics of secondary local interactions such as competing H-bonds.
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Affiliation(s)
- Nicole Y. Meredith
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building, David Brewster RoadEdinburghEH9 3FJUK
| | - Stefan Borsley
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building, David Brewster RoadEdinburghEH9 3FJUK
| | - Ivan V. Smolyar
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building, David Brewster RoadEdinburghEH9 3FJUK
| | - Gary S. Nichol
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building, David Brewster RoadEdinburghEH9 3FJUK
| | - Christopher M. Baker
- SyngentaJealott's Hill International Research CentreBracknell, BerkshireRG42 6EYUK
| | - Kenneth B. Ling
- SyngentaJealott's Hill International Research CentreBracknell, BerkshireRG42 6EYUK
| | - Scott L. Cockroft
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building, David Brewster RoadEdinburghEH9 3FJUK
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2
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Meredith NY, Borsley S, Smolyar IV, Nichol GS, Baker CM, Ling KB, Cockroft SL. Dissecting Solvent Effects on Hydrogen Bonding. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202206604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Nicole Y. Meredith
- EaStCHEM School of Chemistry University of Edinburgh Joseph Black Building, David Brewster Road Edinburgh EH9 3FJ UK
| | - Stefan Borsley
- EaStCHEM School of Chemistry University of Edinburgh Joseph Black Building, David Brewster Road Edinburgh EH9 3FJ UK
| | - Ivan V. Smolyar
- EaStCHEM School of Chemistry University of Edinburgh Joseph Black Building, David Brewster Road Edinburgh EH9 3FJ UK
| | - Gary S. Nichol
- EaStCHEM School of Chemistry University of Edinburgh Joseph Black Building, David Brewster Road Edinburgh EH9 3FJ UK
| | - Christopher M. Baker
- Syngenta Jealott's Hill International Research Centre Bracknell, Berkshire RG42 6EY UK
| | - Kenneth B. Ling
- Syngenta Jealott's Hill International Research Centre Bracknell, Berkshire RG42 6EY UK
| | - Scott L. Cockroft
- EaStCHEM School of Chemistry University of Edinburgh Joseph Black Building, David Brewster Road Edinburgh EH9 3FJ UK
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3
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Patkar D, Ahirwar MB, Deshmukh MM. Energetic Ordering of Hydrogen Bond Strengths in Methanol-Water Clusters: Insights via Molecular Tailoring Approach. Chemphyschem 2022; 23:e202200143. [PMID: 35302702 DOI: 10.1002/cphc.202200143] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 03/17/2022] [Indexed: 12/31/2022]
Abstract
In this work, we examine the strength of various types of individual hydrogen bond (HB) in mixed methanol-water Mn Wm , (n+m=2 to 7) clusters, with an aim to understand the relative order of their strength, using our recently proposed molecular tailoring-based approach (MTA). Among all the types of HB, it is observed that the OM -H…OW HBs are the strongest (6.9 to 12.4 kcal mol-1 ). The next ones are OM -H…OM HBs (6.5 to 11.6 kcal mol-1 ). The OW -H…OW (0.2 to 10.9 kcal mol-1 ) and OW -H…OM HBs (0.3 to 10.3 kcal mol-1 ) are the weakest ones. This energetic ordering of HBs is seen to be different from the respective HB energies in the dimer i. e., OM -H…OM (5.0 to 6.0 kcal mol-1 )>OW -H…OM (1.5 to 6.0 kcal mol-1 )>OM -H…OW (3.8 to 5.6 kcal mol-1 )>OW -H…OW (1.2 to 5.0 kcal mol-1 ). The plausible reason for the difference in the HB energy ordering may be attributed to the increase or decrease in HB strengths due to the formation of cooperative or anti-cooperative HB networks. For instance, the cooperativity contribution towards the different types of HB follows: OM -H…OW (2.4 to 8.6 kcal mol-1 )>OM -H…OM (1.3 to 6.3 kcal mol-1 )>OW -H…OW (-1.0 to 6.5 kcal mol-1 )>OW -H…OM (-1.2 to 5.3 kcal mol-1 ). This ordering of cooperativity contribution is similar to the HB energy ordering obtained by the MTA-based method. It is emphasized here that, the interplay between the cooperative and anti-cooperative contributions are indispensable for the correct energetic ordering of these HBs.
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Affiliation(s)
- Deepak Patkar
- Department of Chemistry, Dr. Harisingh Gour Vishwavidyalaya, A Central University), Sagar, 470003, India
| | - Mini Bharati Ahirwar
- Department of Chemistry, Dr. Harisingh Gour Vishwavidyalaya, A Central University), Sagar, 470003, India
| | - Milind M Deshmukh
- Department of Chemistry, Dr. Harisingh Gour Vishwavidyalaya, A Central University), Sagar, 470003, India
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Liu N, Wu Q, Li Q, Scheiner S. Promotion of TH 3 (T = Si and Ge) group transfer within a tetrel bond by a cation-π interaction. Phys Chem Chem Phys 2022; 24:1113-1119. [PMID: 34927648 DOI: 10.1039/d1cp05323j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The possibility of the transfer of the TH3 group across a tetrel bond is considered by ab initio calculations. The TB is constructed by pairing PhTH3 (Ph = phenyl; T = Si and Ge) with bases NH3, NHCH2, and the C3N2H4 carbene. The TH3 moves toward the base but only by a small amount in these dimers. However, when a Be2+ or Mg2+ dication is placed above the phenyl ring, the tetrel bond strength is greatly magnified reaching up to nearly 100 kcal mol-1. This dication also induces a much higher degree of transfer which can be best categorized as half-transfer for the two N-bases and a near complete transfer for the carbene.
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Affiliation(s)
- Na Liu
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai 264005, People's Republic of China.
| | - Qiaozhuo Wu
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai 264005, People's Republic of China.
| | - Qingzhong Li
- The Laboratory of Theoretical and Computational Chemistry, School of Chemistry and Chemical Engineering, Yantai University, Yantai 264005, People's Republic of China.
| | - Steve Scheiner
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT 84322-0300, USA.
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Schaufelberger F, Ramström O. Activated Self-Resolution and Error-Correction in Catalytic Reaction Networks*. Chemistry 2021; 27:10335-10340. [PMID: 33780566 DOI: 10.1002/chem.202100208] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Indexed: 01/02/2023]
Abstract
Understanding the emergence of function in complex reaction networks is a primary goal of systems chemistry and origin-of-life studies. Especially challenging is to create systems that simultaneously exhibit several emergent functions that can be independently tuned. In this work, a multifunctional complex reaction network of nucleophilic small molecule catalysts for the Morita-Baylis-Hillman (MBH) reaction is demonstrated. The dynamic system exhibited triggered self-resolution, preferentially amplifying a specific catalyst/product set out of a many potential alternatives. By utilizing selective reversibility of the products of the reaction set, systemic thermodynamically driven error-correction could also be introduced. To achieve this, a dynamic covalent MBH reaction based on adducts with internal H-transfer capabilities was developed. By careful tuning of the substituents, rate accelerations of retro-MBH reactions of up to four orders of magnitude could be obtained. This study thus demonstrates how efficient self-sorting of catalytic systems can be achieved through an interplay of several complex emergent functionalities.
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Affiliation(s)
- Fredrik Schaufelberger
- Department of Chemistry, KTH - Royal Institute of Technology Teknikringen 36, 10044 Stockholm (Sweden)
| | - Olof Ramström
- Department of Chemistry, KTH - Royal Institute of Technology Teknikringen 36, 10044 Stockholm (Sweden).,Department of Chemistry, University of Massachusetts Lowell, One University Ave., Lowell, MA, 01854, USA.,Department of Chemistry and Biomedical Sciences, Linnaeus University, 39182, Kalmar, Sweden
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Burns RJ, Mati IK, Muchowska KB, Adam C, Cockroft SL. Quantifying Through-Space Substituent Effects. Angew Chem Int Ed Engl 2020; 59:16717-16724. [PMID: 32542910 PMCID: PMC7540488 DOI: 10.1002/anie.202006943] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Indexed: 01/12/2023]
Abstract
The description of substituents as electron donating or withdrawing leads to a perceived dominance of through-bond influences. The situation is compounded by the challenge of separating through-bond and through-space contributions. Here, we probe the experimental significance of through-space substituent effects in molecular interactions and reaction kinetics. Conformational equilibrium constants were transposed onto the Hammett substituent constant scale revealing dominant through-space substituent effects that cannot be described in classic terms. For example, NO2 groups positioned over a biaryl bond exhibited similar influences as resonant electron donors. Meanwhile, the electro-enhancing influence of OMe/OH groups could be switched off or inverted by conformational twisting. 267 conformational equilibrium constants measured across eleven solvents were found to be better predictors of reaction kinetics than calculated electrostatic potentials, suggesting utility in other contexts and for benchmarking theoretical solvation models.
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Affiliation(s)
- Rebecca J. Burns
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Ioulia K. Mati
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Kamila B. Muchowska
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Catherine Adam
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Scott L. Cockroft
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
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Muchowska KB, Pascoe DJ, Borsley S, Smolyar IV, Mati IK, Adam C, Nichol GS, Ling KB, Cockroft SL. Reconciling Electrostatic and n→π* Orbital Contributions in Carbonyl Interactions. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202005739] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Kamila B. Muchowska
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Dominic J. Pascoe
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Stefan Borsley
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Ivan V. Smolyar
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Ioulia K. Mati
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Catherine Adam
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Gary S. Nichol
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Kenneth B. Ling
- Syngenta Jealott's Hill International Research Centre Bracknell Berkshire RG42 6EY UK
| | - Scott L. Cockroft
- EaStCHEM School of Chemistry The University of Edinburgh Joseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
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Muchowska KB, Pascoe DJ, Borsley S, Smolyar IV, Mati IK, Adam C, Nichol GS, Ling KB, Cockroft SL. Reconciling Electrostatic and n→π* Orbital Contributions in Carbonyl Interactions. Angew Chem Int Ed Engl 2020; 59:14602-14608. [PMID: 32485046 PMCID: PMC7496118 DOI: 10.1002/anie.202005739] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Revised: 05/29/2020] [Indexed: 12/16/2022]
Abstract
Interactions between carbonyl groups are prevalent in protein structures. Earlier investigations identified dominant electrostatic dipolar interactions, while others implicated lone pair n→π* orbital delocalisation. Here these observations are reconciled. A combined experimental and computational approach confirmed the dominance of electrostatic interactions in a new series of synthetic molecular balances, while also highlighting the distance-dependent observation of inductive polarisation manifested by n→π* orbital delocalisation. Computational fiSAPT energy decomposition and natural bonding orbital analyses correlated with experimental data to reveal the contexts in which short-range inductive polarisation augment electrostatic dipolar interactions. Thus, we provide a framework for reconciling the context dependency of the dominance of electrostatic interactions and the occurrence of n→π* orbital delocalisation in C=O⋅⋅⋅C=O interactions.
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Affiliation(s)
- Kamila B. Muchowska
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Dominic J. Pascoe
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Stefan Borsley
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Ivan V. Smolyar
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Ioulia K. Mati
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Catherine Adam
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Gary S. Nichol
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
| | - Kenneth B. Ling
- SyngentaJealott's Hill International Research CentreBracknellBerkshireRG42 6EYUK
| | - Scott L. Cockroft
- EaStCHEM School of ChemistryThe University of EdinburghJoseph Black BuildingDavid Brewster RoadEdinburghEH9 3FJUK
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Burns RJ, Mati IK, Muchowska KB, Adam C, Cockroft SL. Quantifying Through‐Space Substituent Effects. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Rebecca J. Burns
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Ioulia K. Mati
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Kamila B. Muchowska
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Catherine Adam
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
| | - Scott L. Cockroft
- EaStCHEM School of ChemistryUniversity of EdinburghJoseph Black Building David Brewster Road Edinburgh EH9 3FJ UK
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10
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Wechsel R, Žabka M, Ward JW, Clayden J. Competing Hydrogen-Bond Polarities in a Dynamic Oligourea Foldamer: A Molecular Spring Torsion Balance. J Am Chem Soc 2018; 140:3528-3531. [DOI: 10.1021/jacs.8b00567] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Romina Wechsel
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
| | - Matej Žabka
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
| | - John W. Ward
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
| | - Jonathan Clayden
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
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11
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Wei Y, Li Q, Scheiner S. The π-Tetrel Bond and its Influence on Hydrogen Bonding and Proton Transfer. Chemphyschem 2018; 19:736-743. [DOI: 10.1002/cphc.201701136] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Revised: 11/27/2017] [Indexed: 12/18/2022]
Affiliation(s)
- Yuanxin Wei
- Laboratory of Theoretical and Computational Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China), Fax: (+86) 535-6902063
| | - Qingzhong Li
- Laboratory of Theoretical and Computational Chemistry and School of Chemistry and Chemical Engineering; Yantai University; Yantai 264005 China), Fax: (+86) 535-6902063
| | - Steve Scheiner
- Department of Chemistry and Biochemistry; Utah State University; Logan UT 84322-0300 USA
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