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Song Y, Zhang Z, Cao Y, Yu Z. Stimulus-Responsive Amino Acids Behind In Situ Assembled Bioactive Peptide Materials. Chembiochem 2023; 24:e202200497. [PMID: 36278304 DOI: 10.1002/cbic.202200497] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2022] [Revised: 10/18/2022] [Indexed: 02/04/2023]
Abstract
In situ self-assembly of peptides into well-defined nanostructures represents one of versatile strategies for creation of bioactive materials within living cells with great potential in disease diagnosis and treatment. The intimate relationship between amino acid sequences and the assembling propensity of peptides has been thoroughly elucidated over the past few decades. This has inspired development of various controllable self-assembling peptide systems based on stimuli-responsive naturally occurring or non-canonical amino acids, including redox-, pH-, photo-, enzyme-responsive amino acids. This review attempts to summarize the recent progress achieved in manipulating in situ self-assembly of peptides by controllable reactions occurring to amino acids. We will highlight the systems containing non-canonical amino acids developed in our laboratory during the past few years, primarily including acid/enzyme-responsive 4-aminoproline, redox-responsive (seleno)methionine, and enzyme-responsive 2-nitroimidazolyl alanine. Utilization of the stimuli-responsive assembling systems in creation of bioactive materials will be specifically introduced to emphasize their advantages for addressing the concerns lying in disease theranostics. Eventually, we will provide the perspectives for the further development of stimulus-responsive amino acids and thereby demonstrating their great potential in development of next-generation biomaterials.
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Affiliation(s)
- Yanqiu Song
- Key Laboratory of Functional Polymer Materials, Ministry of Education, State Key Laboratory of Medicinal Chemical Biology, Institute of Polymer Chemistry, College of Chemistry, Nankai University, 94 Weijin Road, Tianjin, 300071, P. R. China
| | - Zeyu Zhang
- Key Laboratory of Functional Polymer Materials, Ministry of Education, State Key Laboratory of Medicinal Chemical Biology, Institute of Polymer Chemistry, College of Chemistry, Nankai University, 94 Weijin Road, Tianjin, 300071, P. R. China
| | - Yawei Cao
- Key Laboratory of Functional Polymer Materials, Ministry of Education, State Key Laboratory of Medicinal Chemical Biology, Institute of Polymer Chemistry, College of Chemistry, Nankai University, 94 Weijin Road, Tianjin, 300071, P. R. China
| | - Zhilin Yu
- Key Laboratory of Functional Polymer Materials, Ministry of Education, State Key Laboratory of Medicinal Chemical Biology, Institute of Polymer Chemistry, College of Chemistry, Nankai University, 94 Weijin Road, Tianjin, 300071, P. R. China.,Haihe Laboratory of Synthetic Biology, 21 West 15th Avenue, Tianjin, 300308, P. R. China
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2
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Nowak BP, Schlichter L, Ravoo BJ. Mediating Oxidation of Thioethers with Iodine—A Mild and Versatile Pathway to Trigger the Formation of Peptide Hydrogels. Angew Chem Int Ed Engl 2022; 61:e202201791. [PMID: 35274796 PMCID: PMC9314045 DOI: 10.1002/anie.202201791] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Indexed: 12/03/2022]
Abstract
The development of redox‐triggerable peptide hydrogels poses fundamental challenges, since the highly specific peptide architectures required inevitably limit the versatility of such materials. A powerful, yet rarely applied approach to bypass those barriers is the application of a mediating redox reaction to gradually decrease the pH during hydrogel formation. We report a versatile strategy to trigger the formation of peptide hydrogels from readily accessible acid‐triggerable gelators by generating protons by oxidation of thioethers with triiodide. Adding thiodiglycol as a readily available thioether auxiliary to the basic precursor solution of a peptide gelator efficiently yielded hydrogels after mixing with triiodide, as studied in detail for Nap‐FF and demonstrated for other peptides. Furthermore, incorporation of the thioether moiety in the gelator backbone via the amino acid methionine, as shown for the tailormade Nap‐FMDM peptide, reduces the number of required additives.
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Affiliation(s)
- Benedikt P. Nowak
- Center for Soft Nanoscience and Organic Chemistry Institute Westfälische Wilhelms-Universität Münster Busso-Peus-Straße 10 48149 Münster Germany
| | - Lisa Schlichter
- Center for Soft Nanoscience and Organic Chemistry Institute Westfälische Wilhelms-Universität Münster Busso-Peus-Straße 10 48149 Münster Germany
| | - Bart Jan Ravoo
- Center for Soft Nanoscience and Organic Chemistry Institute Westfälische Wilhelms-Universität Münster Busso-Peus-Straße 10 48149 Münster Germany
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3
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Nowak BP, Schlichter L, Ravoo BJ. Mediating Oxidation of Thioethers with Iodine ‐ A Mild and Versatile Pathway to Trigger the Formation of Peptide Hydrogels. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202201791] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Benedikt P. Nowak
- Westfälische Wilhelms-Universität Münster: Westfalische Wilhelms-Universitat Munster Center for Soft Nanoscience GERMANY
| | - Lisa Schlichter
- Westfälische Wilhelms-Universität Münster: Westfalische Wilhelms-Universitat Munster Center for Soft Nanoscience GERMANY
| | - Bart Jan Ravoo
- Westfalische Wilhelms-Universitat Munster Organic Chemistry Institute Corrensstrasse 40 48149 Münster GERMANY
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4
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Yang J, Yu X, Song J, Song Q, Hall SCL, Yu G, Perrier S. Aggregation‐Induced Emission Featured Supramolecular Tubisomes for Imaging‐Guided Drug Delivery. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115208] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Jie Yang
- Department of Chemistry University of Warwick Coventry CV4 7AL UK
- College of Science Nanjing Forestry University Nanjing 210037 P. R. China
| | - Xinyang Yu
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology Department of Chemistry Tsinghua University Beijing 100084 P. R. China
| | - Ji‐Inn Song
- Department of Chemistry University of Warwick Coventry CV4 7AL UK
| | - Qiao Song
- Department of Chemistry University of Warwick Coventry CV4 7AL UK
| | | | - Guocan Yu
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology Department of Chemistry Tsinghua University Beijing 100084 P. R. China
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Perrier S, Yang J, Yu X, Song JI, Song Q, Hall SCL, Yu G. AIE Featured Supramolecular Tubisomes for Imaging-Guided Drug Delivery. Angew Chem Int Ed Engl 2021; 61:e202115208. [PMID: 34927320 DOI: 10.1002/anie.202115208] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Indexed: 11/07/2022]
Abstract
Polymeric cylinders, a fascinating type of nanostructures with high surface area, internal volume and rigidity, have been exploited as novel drug delivery vehicles over the past decade. However, it's still an open challenge to afford cylindrical nanostructures using polymeric building blocks via traditional self-assembly processes. Herein, we report a hierarchical self-assembly strategy of preparing cylindrical aggregates (tubisomes) from an amphiphilic supramolecular bottlebrush polymer in which cyclic peptide nanotube is employed as the noncovalent backbone. Additionally, aggregation induced emission effect was introduced into the tubisomes to endow them with excellent fluorescent property. Intriguingly, encapsulation of anticancer drug doxorubicin (DOX) can inactivate the fluorescence of both tubisome and DOX due to the energy transfer relay (ETR). The release of DOX can interrupt the ETR effect and light up the silenced fluorescence, thereby permitting the in-situ visualization of drug release. The supramolecular tubisomes described here paves an alternative way for fabricating polymeric cylindrical nanostructures, and holds great potential in imaging-guided drug delivery.
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Affiliation(s)
- Sebastien Perrier
- The University of Warwick / Monash University, Department of Chemistry, Library Road, CV4 7AL, Coventry, UNITED KINGDOM
| | - Jie Yang
- Nanjing Forestry University, College of Science, 210037, Nanjing, CHINA
| | - Xinyang Yu
- Tsinghua University, Department of Chemistry, CHINA
| | - Ji-Inn Song
- University of Warwick, Department of Chemistry, UNITED KINGDOM
| | - Qiao Song
- University of Warwick, Department of Chemistry, UNITED KINGDOM
| | | | - Guocan Yu
- Tsinghua University, Department of Chemistry, CHINA
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6
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Khodaverdi M, Hossain MS, Zhang Z, Martino RP, Nehls CW, Mozhdehi D. Pathway‐Selection for Programmable Assembly of Genetically Encoded Amphiphiles by Thermal Processing. CHEMSYSTEMSCHEM 2021. [DOI: 10.1002/syst.202100037] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Masoumeh Khodaverdi
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
| | - Md Shahadat Hossain
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
| | - Zhe Zhang
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
| | - Robert P. Martino
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
| | - Connor W. Nehls
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
| | - Davoud Mozhdehi
- Department of Chemistry Syracuse University Center for Science and Technology, 111 Syracuse NY 13244 USA
- BioInspired Syracuse Institute for Material and Living Systems Syracuse University Syracuse NY 13244 USA
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7
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Frank A, Hils C, Weber M, Kreger K, Schmalz H, Schmidt H. Hierarchical Superstructures by Combining Crystallization-Driven and Molecular Self-Assembly. Angew Chem Int Ed Engl 2021; 60:21767-21771. [PMID: 34038613 PMCID: PMC8518951 DOI: 10.1002/anie.202105787] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Indexed: 11/11/2022]
Abstract
Combining the unique corona structure of worm-like patchy micelles immobilized on a polymer fiber with the molecular self-assembly of 1,3,5-benzenetricarboxamides (BTAs) leads to hierarchical superstructures with a fir-tree-like morphology. For this purpose, worm-like patchy micelles bearing pendant, functional tertiary amino groups in one of the corona patches were prepared by crystallization-driven self-assembly and immobilized on a supporting polystyrene fiber by coaxial electrospinning. The obtained patchy fibers were then immersed in an aqueous solution of a tertiary amino-functionalized BTA to induce patch-mediated molecular self-assembly to well-defined fir-tree-like superstructures upon solvent evaporation. Interestingly, defined superstructures are obtained only if the pendant functional groups in the surface patches match with the peripheral substituents of the BTA, which is attributed to a local increase in BTA concentration at the polymer fibers' surface.
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Affiliation(s)
- Andreas Frank
- Macromolecular Chemistry IUniversity of Bayreuth and Bavarian Polymer InstituteUniversitätsstrasse 3095447BayreuthGermany
| | - Christian Hils
- Macromolecular Chemistry IIUniversity of Bayreuth and Bavarian Polymer InstituteKeylab Synthesis and Molecular CharacterizationUniversitätsstrasse 3095447BayreuthGermany
| | - Melina Weber
- Macromolecular Chemistry IUniversity of Bayreuth and Bavarian Polymer InstituteUniversitätsstrasse 3095447BayreuthGermany
| | - Klaus Kreger
- Macromolecular Chemistry IUniversity of Bayreuth and Bavarian Polymer InstituteUniversitätsstrasse 3095447BayreuthGermany
| | - Holger Schmalz
- Macromolecular Chemistry IIUniversity of Bayreuth and Bavarian Polymer InstituteKeylab Synthesis and Molecular CharacterizationUniversitätsstrasse 3095447BayreuthGermany
| | - Hans‐Werner Schmidt
- Macromolecular Chemistry IUniversity of Bayreuth and Bavarian Polymer InstituteUniversitätsstrasse 3095447BayreuthGermany
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8
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Frank A, Hils C, Weber M, Kreger K, Schmalz H, Schmidt H. Hierarchische Überstrukturen durch Kombination von kristallisationsinduzierter und molekularer Selbstassemblierung. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202105787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Andreas Frank
- Makromolekulare Chemie I Universität Bayreuth und Bayerisches Polymerinstitut Universitätsstraße 30 95447 Bayreuth Deutschland
| | - Christian Hils
- Makromolekulare Chemie II Universität Bayreuth und Bayerisches Polymerinstitut Keylab Synthesis and Molecular Characterization Universitätsstraße 30 95447 Bayreuth Deutschland
| | - Melina Weber
- Makromolekulare Chemie I Universität Bayreuth und Bayerisches Polymerinstitut Universitätsstraße 30 95447 Bayreuth Deutschland
| | - Klaus Kreger
- Makromolekulare Chemie I Universität Bayreuth und Bayerisches Polymerinstitut Universitätsstraße 30 95447 Bayreuth Deutschland
| | - Holger Schmalz
- Makromolekulare Chemie II Universität Bayreuth und Bayerisches Polymerinstitut Keylab Synthesis and Molecular Characterization Universitätsstraße 30 95447 Bayreuth Deutschland
| | - Hans‐Werner Schmidt
- Makromolekulare Chemie I Universität Bayreuth und Bayerisches Polymerinstitut Universitätsstraße 30 95447 Bayreuth Deutschland
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9
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Kariyawasam LS, Hossain MM, Hartley CS. The Transient Covalent Bond in Abiotic Nonequilibrium Systems. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202014678] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | | | - C. Scott Hartley
- Department of Chemistry & Biochemistry Miami University Oxford OH 45056 USA
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10
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Kariyawasam LS, Hossain MM, Hartley CS. The Transient Covalent Bond in Abiotic Nonequilibrium Systems. Angew Chem Int Ed Engl 2021; 60:12648-12658. [PMID: 33264456 DOI: 10.1002/anie.202014678] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Indexed: 12/20/2022]
Abstract
Biochemical systems accomplish many critical functions with by operating out-of-equilibrium using the energy of chemical fuels. The formation of a transient covalent bond is a simple but very effective tool in designing analogous reaction networks. This Minireview focuses on the fuel chemistries that have been used to generate transient bonds in recent demonstrations of abiotic nonequilibrium systems (i.e., systems that do not make use of biological components). Fuel reactions are divided into two fundamental classifications depending on whether the fuel contributes structural elements to the activated state, a distinction that dictates how they can be used. Reported systems are further categorized by overall fuel reaction (e.g., hydrolysis of alkylating agents, carbodiimide hydration) and illustrate how similar chemistry can be used to effect a wide range of nonequilibrium behavior, ranging from self-assembly to the operation of molecular machines.
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Affiliation(s)
- Lasith S Kariyawasam
- Department of Chemistry & Biochemistry, Miami University, Oxford, OH, 45056, USA
| | | | - C Scott Hartley
- Department of Chemistry & Biochemistry, Miami University, Oxford, OH, 45056, USA
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11
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Dhiman S, Singh A, George SJ. Active Bicomponent Nanoparticle Assembly with Temporal, Microstructural, and Functional Control. Chemistry 2021; 27:705-711. [PMID: 32697396 DOI: 10.1002/chem.202003415] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Indexed: 12/15/2022]
Abstract
Transient supramolecular self-assembly has evolved as a tool to create temporally programmable smart materials. Yet, so far single-component self-assembly has been mostly explored. In contrast, multicomponent self-assembly provides an opportunity to create unique nanostructures exhibiting complex functional outcomes, newer and different than individual components. Even two-component can result in multiple organizations, such as self-sorted domains or co-assembled heterostructures, can occur, thus making it highly complex to predict and reversibly modulate these microstructures. In this study, we attempted to create active bicomponent nanoparticle assemblies of orthogonally pH-responsive-group-functionalized gold and cadmium selenide nanoparticles with temporal microstructural control on their composition (self-sorted or co-assembly) in order to harvest their emergent transient photocatalytic activity by coupling to temporal changes in pH. Moving towards multicomponent systems can deliver next level control in terms of structural and functional outcomes of supramolecular systems.
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Affiliation(s)
- Shikha Dhiman
- Supramolecular Chemistry Laboratory, School of Advanced Materials (SAMat) and New Chemistry Unit, Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore, 560064, India
| | - Akanksha Singh
- Supramolecular Chemistry Laboratory, School of Advanced Materials (SAMat) and New Chemistry Unit, Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore, 560064, India
| | - Subi J George
- Supramolecular Chemistry Laboratory, School of Advanced Materials (SAMat) and New Chemistry Unit, Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore, 560064, India
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12
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Del Grosso E, Prins LJ, Ricci F. Transient DNA‐Based Nanostructures Controlled by Redox Inputs. Angew Chem Int Ed Engl 2020; 59:13238-13245. [DOI: 10.1002/anie.202002180] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 04/15/2020] [Indexed: 12/17/2022]
Affiliation(s)
- Erica Del Grosso
- Department of Chemistry University of Rome Tor Vergata, Via della Ricerca Scientifica 00133 Rome Italy
| | - Leonard J. Prins
- Department of Chemical Sciences University of Padua Via Marzolo 1 35131 Padua Italy
| | - Francesco Ricci
- Department of Chemistry University of Rome Tor Vergata, Via della Ricerca Scientifica 00133 Rome Italy
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13
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Del Grosso E, Prins LJ, Ricci F. Transient DNA‐Based Nanostructures Controlled by Redox Inputs. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202002180] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Erica Del Grosso
- Department of Chemistry University of Rome Tor Vergata, Via della Ricerca Scientifica 00133 Rome Italy
| | - Leonard J. Prins
- Department of Chemical Sciences University of Padua Via Marzolo 1 35131 Padua Italy
| | - Francesco Ricci
- Department of Chemistry University of Rome Tor Vergata, Via della Ricerca Scientifica 00133 Rome Italy
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14
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Sarkar A, Kölsch JC, Berač CM, Venugopal A, Sasmal R, Otter R, Besenius P, George SJ. Impact of NDI-Core Substitution on the pH-Responsive Nature of Peptide-Tethered Luminescent Supramolecular Polymers. ChemistryOpen 2020; 9:346-350. [PMID: 32195075 PMCID: PMC7080532 DOI: 10.1002/open.202000017] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2020] [Revised: 02/13/2020] [Indexed: 01/07/2023] Open
Abstract
The pH-responsive nature of two self-assembled NDI-peptide amphiphile conjugates is reported. The diethoxy substituted NDI showed a pH-dependent assembly behaviour, as expected. In contrast, the isopropylamino- and ethoxy-substituted NDI based supramolecular polymer was stable at acidic and basic aqueous conditions. This finding highlights how subtle changes in the molecular design of π-stacked chromophore-peptide conjugates have a drastic impact on their equilibrium structure and ultimately functional properties.
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Affiliation(s)
- Aritra Sarkar
- New Chemistry UnitSchool of Advanced Materials (SAMAt) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR)JakkurBangalore560064India
| | - Jonas C. Kölsch
- Department of ChemistryJohannes Gutenberg-University MainzDuesbergweg 10–1455128MainzGermany
| | - Christian M. Berač
- Department of ChemistryJohannes Gutenberg-University MainzDuesbergweg 10–1455128MainzGermany
- Graduate School of Materials Science in MainzStaudingerweg 955128MainzGermany
| | - Akhil Venugopal
- New Chemistry UnitSchool of Advanced Materials (SAMAt) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR)JakkurBangalore560064India
| | - Ranjan Sasmal
- New Chemistry UnitSchool of Advanced Materials (SAMAt) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR)JakkurBangalore560064India
| | - Ronja Otter
- Department of ChemistryJohannes Gutenberg-University MainzDuesbergweg 10–1455128MainzGermany
| | - Pol Besenius
- Department of ChemistryJohannes Gutenberg-University MainzDuesbergweg 10–1455128MainzGermany
- Graduate School of Materials Science in MainzStaudingerweg 955128MainzGermany
| | - Subi J. George
- New Chemistry UnitSchool of Advanced Materials (SAMAt) Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR)JakkurBangalore560064India
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15
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16
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Dhiman S, Ghosh R, George SJ. Redox‐Mediated Transient Reconfiguration of a Supramolecular Assembly. CHEMSYSTEMSCHEM 2019. [DOI: 10.1002/syst.201900042] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Shikha Dhiman
- Supramolecular Chemistry Laboratory New Chemistry Unit and School of Advanced Materials (SAMat)Jawaharlal Nehru Centre of Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Rita Ghosh
- Supramolecular Chemistry Laboratory New Chemistry Unit and School of Advanced Materials (SAMat)Jawaharlal Nehru Centre of Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
| | - Subi J. George
- Supramolecular Chemistry Laboratory New Chemistry Unit and School of Advanced Materials (SAMat)Jawaharlal Nehru Centre of Advanced Scientific Research (JNCASR) Jakkur Bangalore 560064 India
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17
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Afrose SP, Bal S, Chatterjee A, Das K, Das D. Designed Negative Feedback from Transiently Formed Catalytic Nanostructures. Angew Chem Int Ed Engl 2019; 58:15783-15787. [PMID: 31476101 DOI: 10.1002/anie.201910280] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Indexed: 02/02/2023]
Affiliation(s)
- Syed Pavel Afrose
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Subhajit Bal
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Ayan Chatterjee
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Krishnendu Das
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Dibyendu Das
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
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18
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Afrose SP, Bal S, Chatterjee A, Das K, Das D. Designed Negative Feedback from Transiently Formed Catalytic Nanostructures. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201910280] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Syed Pavel Afrose
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Subhajit Bal
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Ayan Chatterjee
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Krishnendu Das
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
| | - Dibyendu Das
- Department of Chemical Sciences & Centre for Advanced Functional Materials Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur West Bengal 741246 India
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19
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Kieffer M, Garcia AM, Haynes CJE, Kralj S, Iglesias D, Nitschke JR, Marchesan S. Embedding and Positioning of Two Fe II4 L 4 Cages in Supramolecular Tripeptide Gels for Selective Chemical Segregation. Angew Chem Int Ed Engl 2019; 58:7982-7986. [PMID: 30921499 PMCID: PMC6563161 DOI: 10.1002/anie.201900429] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Indexed: 12/27/2022]
Abstract
An unreported d,l-tripeptide self-assembled into gels that embedded FeII4 L4 metal-organic cages to form materials that were characterized by TEM, EDX, Raman spectroscopy, rheometry, UV/Vis and NMR spectroscopy, and circular dichroism. The cage type and concentration modulated gel viscoelasticity, and thus the diffusion rate of molecular guests through the nanostructured matrix, as gauged by 19 F and 1 H NMR spectroscopy. When two different cages were added to spatially separated gel layers, the gel-cage composite material enabled the spatial segregation of a mixture of guests that diffused into the gel. Each cage selectively encapsulated its preferred guest during diffusion. We thus present a new strategy for using nested supramolecular interactions to enable the separation of small molecules.
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Affiliation(s)
- Marion Kieffer
- Department of ChemistryUniversity of CambridgeLensfield RoadCambridgeCB2 1EWUK
| | - Ana M. Garcia
- Department of Chemical and Pharmaceutical SciencesUniversity of TriesteVia L. Giorgieri 134127TriesteItaly
| | - Cally J. E. Haynes
- Department of ChemistryUniversity of CambridgeLensfield RoadCambridgeCB2 1EWUK
| | - Slavko Kralj
- Department of Chemical and Pharmaceutical SciencesUniversity of TriesteVia L. Giorgieri 134127TriesteItaly
- Materials Synthesis DepartmentJožef Stefan InstituteJamova 391000LjubljanaSlovenia
| | - Daniel Iglesias
- Department of Chemical and Pharmaceutical SciencesUniversity of TriesteVia L. Giorgieri 134127TriesteItaly
| | | | - Silvia Marchesan
- Department of Chemical and Pharmaceutical SciencesUniversity of TriesteVia L. Giorgieri 134127TriesteItaly
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Pieszka M, Sobota AM, Gačanin J, Weil T, Ng DYW. Orthogonally Stimulated Assembly/Disassembly of Depsipeptides by Rational Chemical Design. Chembiochem 2019; 20:1376-1381. [PMID: 30690852 PMCID: PMC6593846 DOI: 10.1002/cbic.201800781] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Indexed: 12/13/2022]
Abstract
Controlling the assembly and disassembly of cross-β-sheet-forming peptides is one of the predominant challenges for this class of supramolecular material. As they constitute a continuously propagating material, every atomic change can be exploited to bring about distinct responses at the architectural level. We report herein that, by using rational chemical design, serine and methionine can both be used as orthogonal chemical triggers to signal assembly/disassembly through their corresponding stimuli. Serine is used to construct an ester-bond oligopeptide that can undergo O,N-acyl rearrangement, whereas methionine is sensitive to oxidation by H2 O2 . Using the example peptide sequence, KIKISQINM, we demonstrate that assembly and disassembly can be independently controlled on demand.
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Affiliation(s)
- Michaela Pieszka
- Synthesis of MacromoleculesMax Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee-1189081UlmGermany
| | - Adriana Maria Sobota
- Synthesis of MacromoleculesMax Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
| | - Jasmina Gačanin
- Synthesis of MacromoleculesMax Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee-1189081UlmGermany
| | - Tanja Weil
- Synthesis of MacromoleculesMax Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
- Institute of Inorganic Chemistry IUlm UniversityAlbert-Einstein-Allee-1189081UlmGermany
| | - David Y. W. Ng
- Synthesis of MacromoleculesMax Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
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21
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Kieffer M, Garcia AM, Haynes CJE, Kralj S, Iglesias D, Nitschke JR, Marchesan S. Embedding and Positioning of Two Fe
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Cages in Supramolecular Tripeptide Gels for Selective Chemical Segregation. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201900429] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Marion Kieffer
- Department of Chemistry University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Ana M. Garcia
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
| | - Cally J. E. Haynes
- Department of Chemistry University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Slavko Kralj
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
- Materials Synthesis Department Jožef Stefan Institute Jamova 39 1000 Ljubljana Slovenia
| | - Daniel Iglesias
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
| | - Jonathan R. Nitschke
- Department of Chemistry University of Cambridge Lensfield Road Cambridge CB2 1EW UK
| | - Silvia Marchesan
- Department of Chemical and Pharmaceutical Sciences University of Trieste Via L. Giorgieri 1 34127 Trieste Italy
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22
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Wei P, Liu L, Wen Y, Zhao G, Xue F, Yuan W, Li R, Zhong Y, Zhang M, Yi T. Release of Amino‐ or Carboxy‐Containing Compounds Triggered by HOCl: Application for Imaging and Drug Design. Angew Chem Int Ed Engl 2019; 58:4547-4551. [DOI: 10.1002/anie.201813648] [Citation(s) in RCA: 73] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 01/21/2019] [Indexed: 12/21/2022]
Affiliation(s)
- Peng Wei
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
- College of Chemistry, Chemical Engineering and Biotechnology Donghua University Shanghai 201620 China
| | - Lingyan Liu
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Ying Wen
- Institute of Molecular Science Shanxi University Taiyuan 030006 China
| | - Guilong Zhao
- Division of Drug Discovery at Hangzhou Dingzhi Pharmaceuticals, Inc. 1500 Wenyixi Road Hangzhou 311121 China
| | - Fengfeng Xue
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Wei Yuan
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Ruohan Li
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Yaping Zhong
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Mengfan Zhang
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Tao Yi
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
- College of Chemistry, Chemical Engineering and Biotechnology Donghua University Shanghai 201620 China
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23
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Wei P, Liu L, Wen Y, Zhao G, Xue F, Yuan W, Li R, Zhong Y, Zhang M, Yi T. Release of Amino‐ or Carboxy‐Containing Compounds Triggered by HOCl: Application for Imaging and Drug Design. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201813648] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Peng Wei
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
- College of Chemistry, Chemical Engineering and Biotechnology Donghua University Shanghai 201620 China
| | - Lingyan Liu
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Ying Wen
- Institute of Molecular Science Shanxi University Taiyuan 030006 China
| | - Guilong Zhao
- Division of Drug Discovery at Hangzhou Dingzhi Pharmaceuticals, Inc. 1500 Wenyixi Road Hangzhou 311121 China
| | - Fengfeng Xue
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Wei Yuan
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Ruohan Li
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Yaping Zhong
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Mengfan Zhang
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
| | - Tao Yi
- Department of Chemistry Fudan University 2005 Songhu Road Shanghai 200438 China
- College of Chemistry, Chemical Engineering and Biotechnology Donghua University Shanghai 201620 China
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24
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Bal S, Das K, Ahmed S, Das D. Chemically Fueled Dissipative Self-Assembly that Exploits Cooperative Catalysis. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201811749] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Subhajit Bal
- Department of Chemical Sciences and Centre for Advanced Functional Materials; Indian Institute of Science Education and Research (IISER); Kolkata Mohanpur 741246 India
| | - Krishnendu Das
- Department of Chemical Sciences and Centre for Advanced Functional Materials; Indian Institute of Science Education and Research (IISER); Kolkata Mohanpur 741246 India
| | - Sahnawaz Ahmed
- Department of Chemical Sciences and Centre for Advanced Functional Materials; Indian Institute of Science Education and Research (IISER); Kolkata Mohanpur 741246 India
| | - Dibyendu Das
- Department of Chemical Sciences and Centre for Advanced Functional Materials; Indian Institute of Science Education and Research (IISER); Kolkata Mohanpur 741246 India
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25
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Bal S, Das K, Ahmed S, Das D. Chemically Fueled Dissipative Self-Assembly that Exploits Cooperative Catalysis. Angew Chem Int Ed Engl 2018; 58:244-247. [PMID: 30395376 DOI: 10.1002/anie.201811749] [Citation(s) in RCA: 115] [Impact Index Per Article: 19.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Indexed: 12/12/2022]
Abstract
In living systems, dissipative processes are driven by the endergonic hydrolysis of chemical fuels such as nucleoside triphosphates. Now, through a simple model system, a transient self-assembled state is realized by utilizing the catalytic effect of histidine on the formation and breaking of ester bonds. First, histidine facilitates the ester bond formation, which then rapidly co-assembles to form a self-supporting gel. An out-of-equilibrium state is realized owing to the cooperative catalysis by the proximal histidines in the assembled state, driving the second pathway and resulting in disassembly to sol. Cooperative effects that use the dual role of imidazoles as nucleophile and as proton donor is utilized to achieve transient assemblies. This simple system mimics the structural journey seen in microtubule formation where the substrate GTP facilitates the non-covalent assembly and triggers a cooperative catalytic process, leading to substrate hydrolysis and subsequent disassembly.
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Affiliation(s)
- Subhajit Bal
- Department of Chemical Sciences and Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER), Kolkata, Mohanpur, 741246, India
| | - Krishnendu Das
- Department of Chemical Sciences and Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER), Kolkata, Mohanpur, 741246, India
| | - Sahnawaz Ahmed
- Department of Chemical Sciences and Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER), Kolkata, Mohanpur, 741246, India
| | - Dibyendu Das
- Department of Chemical Sciences and Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER), Kolkata, Mohanpur, 741246, India
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26
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Spitzer D, Marichez V, Formon GJM, Besenius P, Hermans TM. Surface-Assisted Self-Assembly of a Hydrogel by Proton Diffusion. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201806668] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Daniel Spitzer
- Institute of Organic Chemistry; Johannes Gutenberg-University Mainz; Duesbergweg 10-14 55128 Mainz Germany
| | - Vincent Marichez
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
| | - Georges J. M. Formon
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
| | - Pol Besenius
- Institute of Organic Chemistry; Johannes Gutenberg-University Mainz; Duesbergweg 10-14 55128 Mainz Germany
| | - Thomas M. Hermans
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
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27
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Spitzer D, Marichez V, Formon GJM, Besenius P, Hermans TM. Surface-Assisted Self-Assembly of a Hydrogel by Proton Diffusion. Angew Chem Int Ed Engl 2018; 57:11349-11353. [DOI: 10.1002/anie.201806668] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2018] [Indexed: 12/20/2022]
Affiliation(s)
- Daniel Spitzer
- Institute of Organic Chemistry; Johannes Gutenberg-University Mainz; Duesbergweg 10-14 55128 Mainz Germany
| | - Vincent Marichez
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
| | - Georges J. M. Formon
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
| | - Pol Besenius
- Institute of Organic Chemistry; Johannes Gutenberg-University Mainz; Duesbergweg 10-14 55128 Mainz Germany
| | - Thomas M. Hermans
- University of Strasbourg; CNRS; ISIS UMR 7006; 8 allée Gaspard Monge 67000 Strasbourg France
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Falcone N, Kraatz HB. Supramolecular Assembly of Peptide and Metallopeptide Gelators and Their Stimuli-Responsive Properties in Biomedical Applications. Chemistry 2018; 24:14316-14328. [DOI: 10.1002/chem.201801247] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 04/17/2018] [Indexed: 01/24/2023]
Affiliation(s)
- Natashya Falcone
- Department of Chemical Engineering and Applied Chemistry; University of Toronto; 200 College St M5S 3E5 Toronto Canada
- Department of Physical and Environmental Science; University of Toronto Scarborough; 1065 Military Trail M1C 1A4 Toronto Canada
| | - Heinz-Bernhard Kraatz
- Department of Chemical Engineering and Applied Chemistry; University of Toronto; 200 College St M5S 3E5 Toronto Canada
- Department of Physical and Environmental Science; University of Toronto Scarborough; 1065 Military Trail M1C 1A4 Toronto Canada
- Department of Chemistry; University of Toronto; 80 St. George St M5S 3H6 Toronto Canada
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