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Kim T, Lee C, Lee JY, Kim DN. Controlling Chiroptical Responses via Chemo-Mechanical Deformation of DNA Origami Structures. ACS NANO 2024; 18:3414-3423. [PMID: 38236130 DOI: 10.1021/acsnano.3c10386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
Abstract
DNA origami-based templates have been widely used to fabricate chiral plasmonic metamaterials due to their precise control of the placement of nanoparticles (NPs) in a desired configuration. However, achieving various chiroptical responses inevitably requires a change in the structure of DNA origami-based templates or binding sites on them, leading to the use of significantly different sets of DNA strands. Here, we propose an approach to controlling various chiroptical responses with a single DNA origami design using its chemo-mechanical deformation induced by DNA intercalators. The chiroptical response could be finely tuned by altering the concentration of intercalators only. The silver (Ag) enhancement was used to amplify the chiroptical signal by enlarging NPs and to maintain it by stiffening the template DNA structure. Furthermore, the sensitivity in the chiroptical signal change to the concentration of intercalators could be modulated by the type of intercalator, the mixture of two intercalators, and the stiffness of DNA origami structures. This approach would be useful in a variety of optical applications that require programmed spatial modification of chiroptical responses.
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Affiliation(s)
- Taehwi Kim
- Department of Mechanical Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
| | - Chanseok Lee
- Institute of Advanced Machines and Design, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
| | - Jae Young Lee
- Institute of Advanced Machines and Design, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
| | - Do-Nyun Kim
- Department of Mechanical Engineering, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
- Institute of Advanced Machines and Design, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
- Institute of Engineering Research, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea
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Zhan P, Peil A, Jiang Q, Wang D, Mousavi S, Xiong Q, Shen Q, Shang Y, Ding B, Lin C, Ke Y, Liu N. Recent Advances in DNA Origami-Engineered Nanomaterials and Applications. Chem Rev 2023; 123:3976-4050. [PMID: 36990451 PMCID: PMC10103138 DOI: 10.1021/acs.chemrev.3c00028] [Citation(s) in RCA: 78] [Impact Index Per Article: 78.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Indexed: 03/31/2023]
Abstract
DNA nanotechnology is a unique field, where physics, chemistry, biology, mathematics, engineering, and materials science can elegantly converge. Since the original proposal of Nadrian Seeman, significant advances have been achieved in the past four decades. During this glory time, the DNA origami technique developed by Paul Rothemund further pushed the field forward with a vigorous momentum, fostering a plethora of concepts, models, methodologies, and applications that were not thought of before. This review focuses on the recent progress in DNA origami-engineered nanomaterials in the past five years, outlining the exciting achievements as well as the unexplored research avenues. We believe that the spirit and assets that Seeman left for scientists will continue to bring interdisciplinary innovations and useful applications to this field in the next decade.
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Affiliation(s)
- Pengfei Zhan
- 2nd Physics
Institute, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Andreas Peil
- 2nd Physics
Institute, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Qiao Jiang
- National
Center for Nanoscience and Technology, No 11, BeiYiTiao Zhongguancun, Beijing 100190, China
| | - Dongfang Wang
- School
of Biomedical Engineering and Suzhou Institute for Advanced Research, University of Science and Technology of China, Suzhou 215123, China
| | - Shikufa Mousavi
- Department
of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Qiancheng Xiong
- Department
of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States
- Nanobiology
Institute, Yale University, 850 West Campus Drive, West Haven, Connecticut 06516, United States
| | - Qi Shen
- Department
of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States
- Nanobiology
Institute, Yale University, 850 West Campus Drive, West Haven, Connecticut 06516, United States
- Department
of Molecular Biophysics and Biochemistry, Yale University, 266
Whitney Avenue, New Haven, Connecticut 06511, United States
| | - Yingxu Shang
- National
Center for Nanoscience and Technology, No 11, BeiYiTiao Zhongguancun, Beijing 100190, China
| | - Baoquan Ding
- National
Center for Nanoscience and Technology, No 11, BeiYiTiao Zhongguancun, Beijing 100190, China
| | - Chenxiang Lin
- Department
of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States
- Nanobiology
Institute, Yale University, 850 West Campus Drive, West Haven, Connecticut 06516, United States
- Department
of Biomedical Engineering, Yale University, 17 Hillhouse Avenue, New Haven, Connecticut 06511, United States
| | - Yonggang Ke
- Wallace
H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30322, United States
| | - Na Liu
- 2nd Physics
Institute, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
- Max Planck
Institute for Solid State Research, Heisenbergstrasse 1, 70569 Stuttgart, Germany
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Winterwerber P, Whitfield CJ, Ng DYW, Weil T. Multiple Wavelength Photopolymerization of Stable Poly(Catecholamines)-DNA Origami Nanostructures. Angew Chem Int Ed Engl 2022; 61:e202111226. [PMID: 34813135 PMCID: PMC9303804 DOI: 10.1002/anie.202111226] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Indexed: 11/23/2022]
Abstract
The synthesis of multicomponent polymer hybrids with nanometer precision is chemically challenging in the bottom-up synthesis of complex nanostructures. Here, we leverage the fidelity of the DNA origami technique to install a multiple wavelength responsive photopolymerization system with nanometer resolution. By precisely immobilizing various photosensitizers on the origami template, which are only activated at their respective maximum wavelength, we can control sequential polymerization processes. In particular, the triggered photosensitizers generate reactive oxygen species that in turn initiate the polymerization of the catecholamines dopamine and norepinephrine. We imprint polymeric layers at designated positions on DNA origami, which modifies the polyanionic nature of the DNA objects, thus promoting their uptake into living cells while preserving their integrity. Our herein proposed method provides a rapid platform to access complex 3D nanostructures by customizing material and biological interfaces.
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Affiliation(s)
- Pia Winterwerber
- Max Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
| | | | - David Y. W. Ng
- Max Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
| | - Tanja Weil
- Max Planck Institute for Polymer ResearchAckermannweg 1055128MainzGermany
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Qu DH, Xu H, Zhang Q, Gan JA, Wang Z, Chen M, Shan Y, Chen S, Tong F. Hysteresis Nanoarchitectonics with Chiral Gel Fibers and Achiral Gold Nanospheres for Reversible Chiral Inversion. Chem Asian J 2022; 17:e202101354. [PMID: 35007397 DOI: 10.1002/asia.202101354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2021] [Revised: 01/08/2022] [Indexed: 11/07/2022]
Abstract
Intelligent control over the handedness of circular dichroism (CD) is of special significance in self-organized biological and artificial systems. Herein, we report a chiral organic molecule (R1) containing a disulfide unit self-assembles into M-type helical fibers gels, which undergoes chirality inversion by incorporating gold nanospheres due to the formation of Au-S bonds between R1 and gold nanospheres. Upon heating at 80oC, the aggregation of gold nanospheres results in a disappearance of the Au-S bond, allowing the reversible switching back to M-type helical fibers. The original chirality of M-type fibers could also be retained by adding anisotropic gold nanorods. A series of characterization methods, involving CD, Raman, Infrared spectroscopy, electric microscopy, and small-angle X-ray scattering (SAXS) measurements were used to investigate the mechanism of chiral evolutions. Our results provide a facile way of fabricating hysteresis nanoarchitectonics to achieve dynamic supramolecular chirality using inorganic metallic nanoparticles.
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Affiliation(s)
- Da-Hui Qu
- Key Labs for Advanced Materials, Institute of Fine Chemicals, East China University of Science and Technology, Meilong Road 130, 200237, Shanghai, CHINA
| | - Hui Xu
- East China University of Science and Technology, School of Chemistry and Molecular Engineering, CHINA
| | - Qi Zhang
- East China University of Science and Technology, School of Chemistry and Molecular Engineering, CHINA
| | - Jia-An Gan
- East China University of Science and Technology, school of chemistry and molecular engineering, CHINA
| | - Zhuo Wang
- East China University of Science and Technology, school of chemistry and molecular engineering, CHINA
| | - Meng Chen
- East China University of Science and Technology, school of chemistry and molecular engineering, CHINA
| | - Yahan Shan
- East China University of Science and Technology, school of chemistry and molecular engineering, CHINA
| | - Shaoyu Chen
- East China University of Science and Technology, school of chemistry and molecular engineering, CHINA
| | - Fei Tong
- East China University of Science and Technology, School of Chemistry and Molecular Engineering, 200237, Shanghai, CHINA
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Winterwerber P, Whitfield CJ, Ng DYW, Weil T. Multi‐Wellenlängen‐Photopolymerisation von stabilen Poly(katecholamin)‐DNA‐Origami‐Nanostrukturen**. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202111226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Pia Winterwerber
- Max-Planck-Institut für Polymerforschung Ackermannweg 10 55128 Mainz Deutschland
| | - Colette J. Whitfield
- Max-Planck-Institut für Polymerforschung Ackermannweg 10 55128 Mainz Deutschland
| | - David Y. W. Ng
- Max-Planck-Institut für Polymerforschung Ackermannweg 10 55128 Mainz Deutschland
| | - Tanja Weil
- Max-Planck-Institut für Polymerforschung Ackermannweg 10 55128 Mainz Deutschland
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Berton C, Busiello DM, Zamuner S, Scopelliti R, Fadaei‐Tirani F, Severin K, Pezzato C. Light-Switchable Buffers. Angew Chem Int Ed Engl 2021; 60:21737-21740. [PMID: 34382726 PMCID: PMC8518091 DOI: 10.1002/anie.202109250] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Indexed: 12/16/2022]
Abstract
A visible light-switchable buffer system based on a merocyanine photoacid is presented. Para-substitution of the indolium side with a methoxy group affords a compound suitable for making hydrolytically stable aqueous buffers whose pH can be tuned between 7 and 4 using 500 nm light.
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Affiliation(s)
- Cesare Berton
- Institut des Sciences et Ingénierie ChimiquesÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Daniel Maria Busiello
- Institut de PhysiqueÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Stefano Zamuner
- Institut de PhysiqueÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie ChimiquesÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Farzaneh Fadaei‐Tirani
- Institut des Sciences et Ingénierie ChimiquesÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Kay Severin
- Institut des Sciences et Ingénierie ChimiquesÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
| | - Cristian Pezzato
- Institut des Sciences et Ingénierie ChimiquesÉcole Polytechnique Fédérale de Lausanne (EPFL)1015LausanneSwitzerland
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7
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Berton C, Busiello DM, Zamuner S, Scopelliti R, Fadaei‐Tirani F, Severin K, Pezzato C. Light‐Switchable Buffers. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202109250] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Cesare Berton
- Institut des Sciences et Ingénierie Chimiques École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Daniel Maria Busiello
- Institut de Physique École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Stefano Zamuner
- Institut de Physique École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Rosario Scopelliti
- Institut des Sciences et Ingénierie Chimiques École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Farzaneh Fadaei‐Tirani
- Institut des Sciences et Ingénierie Chimiques École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
| | - Cristian Pezzato
- Institut des Sciences et Ingénierie Chimiques École Polytechnique Fédérale de Lausanne (EPFL) 1015 Lausanne Switzerland
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