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Nowak MG, Skwarecki AS, Milewska MJ. Amino Acid Based Antimicrobial Agents - Synthesis and Properties. ChemMedChem 2021; 16:3513-3544. [PMID: 34596961 PMCID: PMC9293202 DOI: 10.1002/cmdc.202100503] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 09/02/2021] [Indexed: 12/20/2022]
Abstract
Structures of several dozen of known antibacterial, antifungal or antiprotozoal agents are based on the amino acid scaffold. In most of them, the amino acid skeleton is of a crucial importance for their antimicrobial activity, since very often they are structural analogs of amino acid intermediates of different microbial biosynthetic pathways. Particularly, some aminophosphonate or aminoboronate analogs of protein amino acids are effective enzyme inhibitors, as structural mimics of tetrahedral transition state intermediates. Synthesis of amino acid antimicrobials is a particular challenge, especially in terms of the need for enantioselective methods, including the asymmetric synthesis. All these issues are addressed in this review, summing up the current state‐of‐the‐art and presenting perspectives fur further progress.
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Affiliation(s)
- Michał G Nowak
- Department of Organic Chemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
| | - Andrzej S Skwarecki
- Department of Pharmaceutical Technology and Biochemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
| | - Maria J Milewska
- Department of Organic Chemistry and BioTechMed Center, Gdańsk University of Technology, 11/12 Gabriela Narutowicza Street, 80-233, Gdańsk, Poland
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Winter M, Kim H, Waser M. Pd-Catalyzed Allylation of Imines to Access α-CF 3-Substituted α-Amino Acid Derivatives. European J Org Chem 2019; 2019:7122-7127. [PMID: 31798337 PMCID: PMC6887540 DOI: 10.1002/ejoc.201901272] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Indexed: 01/06/2023]
Abstract
We herein report a high yielding protocol for the direct α-allylation of easily accessible trifluoropyruvate-derived imines using Pd-catalysis. The reaction gives access to a variety of different α-allylated-α-CF3-amino acids in a straightforward manner, starting from commercially available trifluoropyruvate. We also provide a proof-of-concept for an enantioselective protocol (up to er = 75:25) by using chiral phosphane ligands.
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Affiliation(s)
- Michael Winter
- Institute of Organic ChemistryJohannes Kepler University LinzAltenbergerstr. 694040LinzAustria
| | - Hyunwoo Kim
- Department of ChemistryKorea Advanced Institute of Science and Technology291 Daehak‐ro34141DaejeonYuseong‐guRepublic of Korea
| | - Mario Waser
- Institute of Organic ChemistryJohannes Kepler University LinzAltenbergerstr. 694040LinzAustria
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Giri SS, Lin LH, Jadhav PD, Liu RS. Gold-Catalyzed 1,4-Carbooxygenation of 3-En-1-ynamides with Allylic and Propargylic AlcoholsviaNon-Claisen Pathways. Adv Synth Catal 2017. [DOI: 10.1002/adsc.201601092] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Sovan Sundar Giri
- Department of Chemistry; National Tsing-Hua University; Hsinchu Taiwan, ROC
| | - Li-Hsuan Lin
- Department of Chemistry; National Tsing-Hua University; Hsinchu Taiwan, ROC
| | | | - Rai-Shung Liu
- Department of Chemistry; National Tsing-Hua University; Hsinchu Taiwan, ROC
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Hupp CD, Tepe JJ. 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide Hydrochloride-Mediated Oxazole Rearrangement: Gaining Access to a Unique Marine Alkaloid Scaffold. J Org Chem 2009; 74:3406-13. [DOI: 10.1021/jo900264p] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Christopher D. Hupp
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824
| | - Jetze J. Tepe
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824
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Zhao L, Li CJ. Functionalizing Glycine Derivatives by Direct CC Bond Formation. Angew Chem Int Ed Engl 2008. [DOI: 10.1002/ange.200801367] [Citation(s) in RCA: 88] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Zhao L, Li CJ. Functionalizing Glycine Derivatives by Direct CC Bond Formation. Angew Chem Int Ed Engl 2008; 47:7075-8. [DOI: 10.1002/anie.200801367] [Citation(s) in RCA: 293] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Andreev VG, Kolomiets AF. [3,3]-Sigmatropic rearrangements as a method of organofluorine synthesis. RUSSIAN CHEMICAL REVIEWS 2007. [DOI: 10.1070/rc1993v062n06abeh000033] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Pace A, Buscemi S, Vivona N. THE SYNTHESIS OF FLUORINATED HETEROAROMATIC COMPOUNDS. PART 2. FIVE-MEMBERED RINGS WITH TWO HETEROATOMS. A REVIEW. ORG PREP PROCED INT 2007. [DOI: 10.1080/00304940709458581] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Burger K, Hennig L, Tsouker P, Spengler J, Albericio F, Koksch B. Domino reactions with fluorinated five-membered heterocycles. α-Trifluoromethyl α-amino acids with unsaturated side-chains. Amino Acids 2006; 31:427-33. [PMID: 16715414 DOI: 10.1007/s00726-006-0321-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2005] [Accepted: 02/03/2006] [Indexed: 10/24/2022]
Abstract
Alpha-trifluoromethyl alpha-amino acids with unsaturated side-chains have been prepared from 5-fluoro-4-trifluoromethyloxazole and allyl, propargyl as well as terpene alcohols in a one-pot procedure.
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Affiliation(s)
- K Burger
- Department of Organic Chemistry, University of Leipzig, Leipzig, Germany.
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Kurtz KC, Frederick MO, Lambeth RH, Mulder JA, Tracey MR, Hsung RP. Synthesis of chiral allenes from ynamides through a highly stereoselective Saucy–Marbet rearrangement. Tetrahedron 2006. [DOI: 10.1016/j.tet.2005.11.087] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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11
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Burger K, Hennig L, Spengler J, Albericio F. Synthesis of Partially Fluorinated Heterocycles from 4,4-Bis(trifluoromethyl) Substituted Hetero-1,3-dienes via C-F Bond Activation and Their Application as Trifluoromethyl Substituted Building Blocks. HETEROCYCLES 2006. [DOI: 10.3987/rev-06-sr(o)2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Affiliation(s)
- Christian Jäckel
- Free University Berlin, Department of Chemistry – Organic Chemistry Takustrasse 3, 14195 Berlin, Germany, Fax: +49‐30‐838‐55644
| | - Beate Koksch
- Free University Berlin, Department of Chemistry – Organic Chemistry Takustrasse 3, 14195 Berlin, Germany, Fax: +49‐30‐838‐55644
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Koksch B, Quaedflieg PJ, Michel T, Burger K, Broxterman QB, Schoemaker HE. Enzymatic resolution of Cα-fluoroalkyl substituted amino acids. ACTA ACUST UNITED AC 2004. [DOI: 10.1016/j.tetasy.2004.02.027] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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14
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Peng W, Zhu S. The synthesis of 2,4-dienyl fluoroalkyl ketones by a tandem three-stage sequence of propargyl 2-fluoroalkylvinyl ether formation, Claisen rearrangement, and allene-to-conjugated diene isomerization. Tetrahedron 2003. [DOI: 10.1016/s0040-4020(03)00663-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Walfort B, Stalke D. Methylenetriimidosulfate H2CS(NtBu)32−—The First Dianionic Sulfur(VI) Ylide. Angew Chem Int Ed Engl 2001; 40:3846-3849. [DOI: 10.1002/1521-3773(20011015)40:20<3846::aid-anie3846>3.0.co;2-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2001] [Indexed: 11/11/2022]
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17
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Kazmaier U. Application of the Chelate-Enolate Claisen Rearrangement to The Synthesis of γ,δ-Unsaturated Amino Acids. ACTA ACUST UNITED AC 1997. [DOI: 10.1002/jlac.199719970203] [Citation(s) in RCA: 71] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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18
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A new approach to the stereoselective synthesis of conveniently protected α-allyl substituted amino acids; chiral key compounds in the synthesis of constrained peptide isostere constituents. ACTA ACUST UNITED AC 1997. [DOI: 10.1016/s0957-4166(96)00516-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Kazmaier U, Maier S. Synthesis of sterically high demanding α-alkylated amino acids via Claisen rearrangement of chelated enolates. Tetrahedron 1996. [DOI: 10.1016/0040-4020(95)00946-9] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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20
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Kazmayer U, Krebs A. Synthese chiraler γ,δ-ungesättigter Aminosäuren durch asymmetrische Ester-Enolat-Claisen-Umlagerung. Angew Chem Int Ed Engl 1995. [DOI: 10.1002/ange.19951071832] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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21
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Kazmaier U, Maier S. Stereoselective synthesis of α-alkylated γ,δ-unsaturated amino acids via Claisen rearrangement of chelated enolates. ACTA ACUST UNITED AC 1995. [DOI: 10.1039/c39950001991] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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22
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Hollweck W, Burger K. Untersuchungen zur Kn�pfung der Peptidbindung mit ?-trifluormethylsubstituierten ?-Aminos�uren. ACTA ACUST UNITED AC 1995. [DOI: 10.1002/prac.19953370183] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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23
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Synthese ungesättigter Aminosäuren durch [3,3]-sigmatrope Umlagerung chelatverbrückter Glycinesterenolate. Angew Chem Int Ed Engl 1994. [DOI: 10.1002/ange.19941060923] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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24
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Burger K, Schierlinger C, Mütze K, Hollweck W, Koksch B. 2-Trifluormethyl-substituierte Aminosäuren, 20. N- und C-terminaler Einbau von α-Trifluormethyl-substituierten α-Aminosäuren in Azapeptide. ACTA ACUST UNITED AC 1994. [DOI: 10.1002/jlac.199419940414] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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25
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Burger K, Wucherpfennig U, Brunner E. Fluoro Heterocycles with Five-Membered Rings. ADVANCES IN HETEROCYCLIC CHEMISTRY 1994. [DOI: 10.1016/s0065-2725(08)60181-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
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26
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Burger K, M�tze K, Hollweck W, Koksch B, Kuhl P, Jakubke HD, Riede J, Schier A. Untersuchungen zur proteasekatalysierten und chemischen Peptidbindungskn�pfung mit ?-trifluormethylsubstituierten ?-Aminos�uren. ACTA ACUST UNITED AC 1993. [DOI: 10.1002/prac.19933350404] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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27
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28
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29
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May A, Roesky HW, Stalke D, Pauer F, Sheldrick GM. Darstellung der ersten Sulfin-imide (Thion-S-imide) mit Perfluormethylgruppen unter Verwendung von Natrium-hexamethyldisilazanid als schonendes Dehydrohalogenierungsreagenz. ACTA ACUST UNITED AC 1990. [DOI: 10.1002/cber.19901230705] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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30
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Burger K, Gaa K, Höss E. Ein einfacher zugang zu derivaten des α-trifluormethyl-substituierten phenylalanins via 4-benzyl-4-trifluormethyl-5(4H)-oxazolone [1]. J Fluor Chem 1990. [DOI: 10.1016/s0022-1139(00)80450-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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31
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Wucherpfennig U, Burger K. A convenient method for carboxyl group activation in trifluoromethyl substituted α-amino and α-hydroxy acids. J Fluor Chem 1989. [DOI: 10.1016/s0022-1139(00)84538-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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