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Liu Y, Xu L, Jin X, Yin B, Rao Y, Zhou M, Song J, Osuka A. The unprecedented strong paratropic ring current of a bis-Pd II complex of 5,10,23-trimesityl [28]heptaphyrin(1.1.0.0.1.0.0). Chem Sci 2024; 15:11402-11407. [PMID: 39055025 PMCID: PMC11268459 DOI: 10.1039/d4sc01909a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Accepted: 06/04/2024] [Indexed: 07/27/2024] Open
Abstract
Acid-catalyzed Friedel-Crafts-type cyclization of tetrapyrrolic BF2 complex 1 and α,α'-dibromotripyrrin 2 gave 5,10,23-trimesityl [28]heptaphyrin(1.1.0.0.1.0.0) BF2 complex 3BF2 as a stable and moderate antiaromatic macrocycle. Demetalation of 3BF2 with methanesulfonic acid followed by treatment with HCl gave free-base salt 3HCl that holds a chloride anion at the core. This salt displays a planar structure with an inverted pyrrole and a stronger paratropic ring current. Metalation of neutral free-base 3 with PdCl2 gave bis-PdII complex 3Pd2 as a stable antiaromatic molecule. The 1H NMR spectrum of 3Pd2 displays signals due to pyrrolic β-protons in the range of -1.06 ∼ -1.90 ppm, indicating the unprecedented strong paratropic ring current.
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Affiliation(s)
- Yang Liu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Ling Xu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Xiaorong Jin
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Bangshao Yin
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Yutao Rao
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Mingbo Zhou
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Jianxin Song
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
| | - Atsuhiro Osuka
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University Changsha 410081 China
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2
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He Y, Zhu B, Li Q, Baryshnikov G, Fang YH, Li C, Sha F, Wu XY, Wang BW, Ågren H, Xie Y. Chain Length Modulated Dimerization and Cyclization of Terminal Thienyl-Blocked Oligopyrranes. Org Lett 2022; 24:5428-5432. [PMID: 35838541 DOI: 10.1021/acs.orglett.2c02147] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Oxidation of thienyl-blocked bilane and pentapyrrane afforded chain length dependent products of the symmetric dimer D1 and the thienyloligopyrrin-appended pentaphyrin analogue P2, respectively, with the latter formed by simultaneous dimerization and cyclization. Coordination of D1 and P2 with Cu(II) afforded di- and monometallic complexes D1-Cu2 and P2-Cu, respectively. These compounds exhibit distinct NIR absorption, with the absorption tail of D1-Cu2 extended to ca. 1900 nm despite its smaller conjugation framework than that of P2-Cu.
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Affiliation(s)
- Yixing He
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Bin Zhu
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Qizhao Li
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Glib Baryshnikov
- Department of Science & Technology, Laboratory of Organic Electronics, Linköping University, SE-581 83 Norrköping, Sweden
| | - Yu-Hui Fang
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Chengjie Li
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Feng Sha
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Xin-Yan Wu
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
| | - Bing-Wu Wang
- Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China
| | - Hans Ågren
- Department of Physics and Astronomy, Uppsala University, SE-751 20 Uppsala, Sweden
| | - Yongshu Xie
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, State Key Laboratory of Bioreactor Engineering, Laboratory of Pharmaceutical Crystal Engineering & Technology, School of Pharmacy, East China University of Science & Technology, Shanghai, 200237, China
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Zhang Y, Cai Y, He Y, Lin Q, Ren J, Cao D, Zhang L. A label-free fluorescent peptide probe for sensitive and selective determination of copper and sulfide ions in aqueous systems. RSC Adv 2021; 11:7426-7435. [PMID: 35423246 PMCID: PMC8694936 DOI: 10.1039/d0ra08788b] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 02/06/2021] [Indexed: 12/22/2022] Open
Abstract
A label free fluorescent peptide probe (HDSGWEVHH) was used for Cu2+ and S2- determination in aqueous solution. Our results demonstrated that HDSGWEVHH is highly selective and sensitive for monitoring free Cu2+ concentration via quenching of the probe fluorescence upon Cu2+ binding. The mechanism of the complexation is investigated with Cyclic Voltammetry (CV), 1H nuclear magnetic resonance (NMR), electron paramagnetic resonance (EPR) spectroscopy and computational techniques. Theoretical calculation results indicated the binding ratio of the probe to Cu2+ is 2 : 1 and the binding constant was obtained as 1.72 × 10 8 M-1. Cu2+ concentration can be detected with the detection limit of 16 nM. Free Cu2+ concentration released from the metallothionein-Cu complex at different pH values was detected. Cu2+ concentration in real water and tea samples was also detected, and the results were consistent with the ones monitored by atomic absorption spectrometer. Because of the exceedingly small K sp value of CuS (1.27 × 10-36), S2- can sequester Cu2+ from HDSGWEVHH to restore the tryptophan (W) fluorescence. Thus the HDSGWEVHH-Cu2+ complex can also be used for S2- detection. The S2- concentrations can be monitored with a detection limit of 19 nM. The assay is also amenable to measurement of S2- concentration in pure water samples. Thus the probe designed herein is sensitive, label free, low cost, and environmentally friendly for Cu2+ and S2- determination in aqueous solutions.
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Affiliation(s)
- Yadan Zhang
- National Engineering Laboratory for Rice and Byproduct Deep Processing, Hunan Key Laboratory of Processed Food for Special Medical Purpose, Hunan Key Laboratory of Forestry Edible Resources Safety and Processing, School of Food Science and Engineering, Central South University of Forestry and Technology Changsha 410004 P. R. China
| | - Yunhui Cai
- National Engineering Laboratory for Rice and Byproduct Deep Processing, Hunan Key Laboratory of Processed Food for Special Medical Purpose, Hunan Key Laboratory of Forestry Edible Resources Safety and Processing, School of Food Science and Engineering, Central South University of Forestry and Technology Changsha 410004 P. R. China
| | - Yonghui He
- Key Laboratory of Chemistry in Ethnic Medicinal Resources, State Ethnic Affairs Commission & Ministry of Education, Yunnan Minzu University Kunming Yunnan 650500 P. R. China
| | - Qinlu Lin
- National Engineering Laboratory for Rice and Byproduct Deep Processing, Hunan Key Laboratory of Processed Food for Special Medical Purpose, Hunan Key Laboratory of Forestry Edible Resources Safety and Processing, School of Food Science and Engineering, Central South University of Forestry and Technology Changsha 410004 P. R. China
| | - Jiali Ren
- National Engineering Laboratory for Rice and Byproduct Deep Processing, Hunan Key Laboratory of Processed Food for Special Medical Purpose, Hunan Key Laboratory of Forestry Edible Resources Safety and Processing, School of Food Science and Engineering, Central South University of Forestry and Technology Changsha 410004 P. R. China
| | - Dongsheng Cao
- Xiangya School of Pharmaceutical Science, Central South University Changsha 410083 P. R. China
| | - Lin Zhang
- National Engineering Laboratory for Rice and Byproduct Deep Processing, Hunan Key Laboratory of Processed Food for Special Medical Purpose, Hunan Key Laboratory of Forestry Edible Resources Safety and Processing, School of Food Science and Engineering, Central South University of Forestry and Technology Changsha 410004 P. R. China
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Schulte ZM, Kwon YH, Han Y, Liu C, Li L, Yang Y, Jarvi AG, Saxena S, Veser G, Johnson JK, Rosi NL. H 2/CO 2 separations in multicomponent metal-adeninate MOFs with multiple chemically distinct pore environments. Chem Sci 2020; 11:12807-12815. [PMID: 34094475 PMCID: PMC8163211 DOI: 10.1039/d0sc04979d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Metal-organic frameworks constructed from multiple (≥3) components often exhibit dramatically increased structural complexity compared to their 2 component (1 metal, 1 linker) counterparts, such as multiple chemically unique pore environments and a plurality of diverse molecular diffusion pathways. This inherent complexity can be advantageous for gas separation applications. Here, we report two isoreticular multicomponent MOFs, bMOF-200 (4 components; Cu, Zn, adeninate, pyrazolate) and bMOF-201 (3 components; Zn, adeninate, pyrazolate). We describe their structures, which contain 3 unique interconnected pore environments, and we use Kohn-Sham density functional theory (DFT) along with the climbing image nudged elastic band (CI-NEB) method to predict potential H2/CO2 separation ability of bMOF-200. We examine the H2/CO2 separation performance using both column breakthrough and membrane permeation studies. bMOF-200 membranes exhibit a H2/CO2 separation factor of 7.9. The pore space of bMOF-201 is significantly different than bMOF-200, and one molecular diffusion pathway is occluded by coordinating charge-balancing formate and acetate anions. A consequence of this structural difference is reduced permeability to both H2 and CO2 and a significantly improved H2/CO2 separation factor of 22.2 compared to bMOF-200, which makes bMOF-201 membranes competitive with some of the best performing MOF membranes in terms of H2/CO2 separations.
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Affiliation(s)
- Zachary M Schulte
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Yeon Hye Kwon
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Yi Han
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Chong Liu
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Lin Li
- Department of Chemical and Petroleum Engineering, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Yahui Yang
- Department of Chemical and Petroleum Engineering, University of Pittsburgh Pittsburgh PA 15260 USA
| | | | - Sunil Saxena
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Götz Veser
- Department of Chemical and Petroleum Engineering, University of Pittsburgh Pittsburgh PA 15260 USA
| | - J Karl Johnson
- Department of Chemical and Petroleum Engineering, University of Pittsburgh Pittsburgh PA 15260 USA
| | - Nathaniel L Rosi
- Department of Chemistry, University of Pittsburgh Pittsburgh PA 15260 USA .,Department of Chemical and Petroleum Engineering, University of Pittsburgh Pittsburgh PA 15260 USA.,U.S. Department of Energy, National Energy Technology Laboratory Pittsburgh PA 15236 USA.,Oak Ridge Institute for Science and Education Pittsburgh PA 15236 USA
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5
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Li C, Zhang K, Ishida M, Li Q, Shimomura K, Baryshnikov G, Li X, Savage M, Wu XY, Yang S, Furuta H, Xie Y. Tripyrrin-armed isosmaragdyrins: synthesis, heterodinuclear coordination, and protonation-triggered helical inversion. Chem Sci 2020; 11:2790-2795. [PMID: 34084339 PMCID: PMC8157612 DOI: 10.1039/c9sc06197e] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Oxidative ring closure of linear oligopyrroles is one of the synthetic approaches to novel porphyrinoids with dinuclear coordination sites and helical chirality. The spatial arrangement of the pyrrolic groups of octapyrrole (P8) affected the position of the intramolecular oxidative coupling of the pyrrolic units; tripyrrin-armed isosmaragdyrin analogue (1) containing a β,β-linked bipyrrole moiety was synthesized regioselectively in a high yield by using FeCl3. NiII-coordination at the armed tripyrrin site of 1 allowed the formation of diastereomeric helical twisted complexes (2A and 2B) and succeeding CuII-coordination at the macrocyclic core afforded heterodinuclear NiII/CuII-complexes (3A and 3B). Each of them comprised a pair of separable enantiomers, exhibiting P- and M-helices, respectively. Notably, diastereomeric interconversion from 2A to 2B was quantitatively achieved as a consequence of helical transformation under acidic conditions.
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Affiliation(s)
- Chengjie Li
- Key Laboratory for Advanced Materials, Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science & Technology Shanghai 200237 China
| | - Kai Zhang
- Key Laboratory for Advanced Materials, Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science & Technology Shanghai 200237 China
| | - Masatoshi Ishida
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University Fukuoka 819-0395 Japan
| | - Qizhao Li
- Key Laboratory for Advanced Materials, Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science & Technology Shanghai 200237 China
| | - Keito Shimomura
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University Fukuoka 819-0395 Japan
| | - Glib Baryshnikov
- School of Biotechnology, KTH Royal Institute of Technology SE-10691 Stockholm Sweden
| | - Xin Li
- School of Biotechnology, KTH Royal Institute of Technology SE-10691 Stockholm Sweden
| | - Mathew Savage
- School of Chemistry, University of Manchester Manchester M13 9PL UK
| | - Xin-Yan Wu
- Key Laboratory for Advanced Materials, Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science & Technology Shanghai 200237 China
| | - Sihai Yang
- School of Chemistry, University of Manchester Manchester M13 9PL UK
| | - Hiroyuki Furuta
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems, Kyushu University Fukuoka 819-0395 Japan
| | - Yongshu Xie
- Key Laboratory for Advanced Materials, Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science & Technology Shanghai 200237 China
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7
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Xue S, Kuzuhara D, Aratani N, Yamada H. Control of Aromaticity and
cis
‐/
trans
‐Isomeric Structure of Non‐Planar Hexaphyrin(2.1.2.1.2.1) and Metal Complexes. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201906946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Songlin Xue
- Graduate School of Science and TechnologyNara Institute of Science and Technology 8916-5 Takayama-cho Ikoma Nara 630-0192 Japan
| | - Daiki Kuzuhara
- Faculty of Science and EngineeringIwate University 4-3-5 Ueda Morioka Iwate 020-8551 Japan
| | - Naoki Aratani
- Graduate School of Science and TechnologyNara Institute of Science and Technology 8916-5 Takayama-cho Ikoma Nara 630-0192 Japan
| | - Hiroko Yamada
- Graduate School of Science and TechnologyNara Institute of Science and Technology 8916-5 Takayama-cho Ikoma Nara 630-0192 Japan
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8
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Xue S, Kuzuhara D, Aratani N, Yamada H. Control of Aromaticity and cis-/trans-Isomeric Structure of Non-Planar Hexaphyrin(2.1.2.1.2.1) and Metal Complexes. Angew Chem Int Ed Engl 2019; 58:12524-12528. [PMID: 31287217 DOI: 10.1002/anie.201906946] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Indexed: 11/10/2022]
Abstract
Vinylene-bridged hexaphyrin(2.1.2.1.2.1) was synthesized from dipyrrolyl diphenylethenes by acid-catalyzed condensation reactions. Freebase hexaphyrin(2.1.2.1.2.1) forms a distorted structure with non-aromatic characteristics. The aromaticity and molecular configuration of non-planar hexaphyrin(2.1.2.1.2.1) can be controlled by insertion of metal ions. Freebase and zinc complexes show a distorted structure without macrocyclic aromaticity, whereas copper complexes show a figure-of-eight structure with macrocyclic aromaticity. It is the first example of aromaticity conversion of a distorted expanded porphyrin involving vinylene bridges.
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Affiliation(s)
- Songlin Xue
- Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama-cho, Ikoma, Nara, 630-0192, Japan
| | - Daiki Kuzuhara
- Faculty of Science and Engineering, Iwate University, 4-3-5 Ueda, Morioka, Iwate, 020-8551, Japan
| | - Naoki Aratani
- Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama-cho, Ikoma, Nara, 630-0192, Japan
| | - Hiroko Yamada
- Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama-cho, Ikoma, Nara, 630-0192, Japan
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Hashimoto K, Koide T, Okawara T, Shimakoshi H, Hori Y, Shiota Y, Yoshizawa K, Hisaeda Y. Redox behaviour of the β-dihydroporphycene cobalt complex: study on the effect of hydrogenation of the ligand. Dalton Trans 2019; 48:872-881. [PMID: 30417918 DOI: 10.1039/c8dt03743d] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The dihydrogenated porphycene cobalt(ii) complex was synthesized and electrochemical experiments were carried out. The one-electron reduction of the complex proceeded at the central metal to afford the Co(i) species; in contrast, for the non-hydrogenated porphycene cobalt(ii) complex, the one-electron reduction gave the ligand reduced radical anion species. The reactivity of the one-electron reduced species with alkyl halides showed clear differences between the complexes. Hydrogenation of the β-position of the porphycene makes it possible to generate a central cobalt reduced species possessing a higher reactivity than the ligand reduced radical anion species.
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Affiliation(s)
- Koichi Hashimoto
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University, Moto-oka 744, Nishi-ku, Fukuoka-shi, Fukuoka 819-0395, Japan.
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10
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Vargas-Zúñiga GI, Sessler JL. Anion and Cation Complexes of Expanded Porphyrins. ADVANCES IN INORGANIC CHEMISTRY 2018. [DOI: 10.1016/bs.adioch.2017.11.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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11
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Theoretical investigation on the electronic properties and UV–Vis absorption spectra of expanded porphyrin mono-Cu(II) complexes. COMPUT THEOR CHEM 2017. [DOI: 10.1016/j.comptc.2017.09.018] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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12
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Abstract
This review underscores the conformational flexibility of porphyrinoids, a unique class of functional molecules, starting from the smallest triphyrins(1.1.1) via [18]porphyrins(1.1.1.1) and concluding with a variety of expanded porphyrinoids and heteroporphyrinoids, including the enormous [96]tetracosaphyrin(1.0.1.0.1.0.1.0.1.0.1.0.1.0.1.0.1.0.1.0.1.0.1.0). The specific flexibility of porphyrinoids has been documented as instrumental in the designing or redesigning of macrocyclic frames, particularly in the search for adjustable platforms for coordination or organometallic chemistry, anion binding, or mechanistic switches in molecular devices. A structural prearrangement to coordinate one or more metal ions has been outlined. The coverage of the topic focuses on representative examples of geometry or conformational rearrangements for each selected class of the numerous porphyrinoids accordingly categorized by the number of built-in carbo- or heterocycles.
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Affiliation(s)
- Bartosz Szyszko
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Michał J Białek
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Ewa Pacholska-Dudziak
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
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Naoda K, Osuka A. A Doubly Zwitterionic Antiaromatic [28]Hexaphyrin Formed upon Deprotonation of 5,20-Di(N-methyl-4-pyridinium)-Substituted [28]Hexaphyrin. Chem Asian J 2016; 11:2849-2853. [PMID: 27529538 DOI: 10.1002/asia.201601071] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2016] [Indexed: 11/06/2022]
Abstract
A rectangular 5,20-di(4-pyridyl) [26]hexaphyrin was reduced with NaBH4 to give the corresponding twisted Möbius aromatic [28]hexaphyrin. Subsequent double N-methylation gave a dicationic 5,20-di(N-methyl-4-pyridinium) [28]hexaphyrin, which was converted to a doubly zwitterionic and Hückel antiaromatic [28]hexaphyrin upon deprotonation with sodium methoxide.
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Affiliation(s)
- Koji Naoda
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan
| | - Atsuhiro Osuka
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan.
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14
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Tanaka T, Osuka A. Chemistry of meso-Aryl-Substituted Expanded Porphyrins: Aromaticity and Molecular Twist. Chem Rev 2016; 117:2584-2640. [DOI: 10.1021/acs.chemrev.6b00371] [Citation(s) in RCA: 283] [Impact Index Per Article: 35.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Takayuki Tanaka
- Department of Chemistry,
Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
| | - Atsuhiro Osuka
- Department of Chemistry,
Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
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15
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Stępień M, Gońka E, Żyła M, Sprutta N. Heterocyclic Nanographenes and Other Polycyclic Heteroaromatic Compounds: Synthetic Routes, Properties, and Applications. Chem Rev 2016; 117:3479-3716. [PMID: 27258218 DOI: 10.1021/acs.chemrev.6b00076] [Citation(s) in RCA: 865] [Impact Index Per Article: 108.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Two-dimensionally extended, polycyclic heteroaromatic molecules (heterocyclic nanographenes) are a highly versatile class of organic materials, applicable as functional chromophores and organic semiconductors. In this Review, we discuss the rich chemistry of large heteroaromatics, focusing on their synthesis, electronic properties, and applications in materials science. This Review summarizes the historical development and current state of the art in this rapidly expanding field of research, which has become one of the key exploration areas of modern heterocyclic chemistry.
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Affiliation(s)
- Marcin Stępień
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Elżbieta Gońka
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Marika Żyła
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Natasza Sprutta
- Wydział Chemii, Uniwersytet Wrocławski , ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
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16
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Karthik G, Cha WY, Ghosh A, Kim T, Srinivasan A, Kim D, Chandrashekar TK. Phenylene-Bridged Core-Modified Planar Aromatic Octaphyrin: Aromaticity, Photophysical and Anion Receptor Properties. Chem Asian J 2016; 11:1447-53. [DOI: 10.1002/asia.201600177] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2016] [Indexed: 01/05/2023]
Affiliation(s)
- Ganesan Karthik
- School of Chemical Sciences; National Institute of Science Education and Research (NISER); Bhubaneswar 752-050 Odisha India
| | - Won-Young Cha
- Department of Chemistry; Yonsei University; Shinchon-dong 134, Seodaemoon-gu Seoul 120-749 Korea
| | - Arindam Ghosh
- School of Chemical Sciences; National Institute of Science Education and Research (NISER); Bhubaneswar 752-050 Odisha India
| | - Taeyeon Kim
- Department of Chemistry; Yonsei University; Shinchon-dong 134, Seodaemoon-gu Seoul 120-749 Korea
| | - A. Srinivasan
- School of Chemical Sciences; National Institute of Science Education and Research (NISER); Bhubaneswar 752-050 Odisha India
| | - Dongho Kim
- Department of Chemistry; Yonsei University; Shinchon-dong 134, Seodaemoon-gu Seoul 120-749 Korea
| | - Tavarekere K. Chandrashekar
- School of Chemical Sciences; National Institute of Science Education and Research (NISER); Bhubaneswar 752-050 Odisha India
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17
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Paraginski GL, Hörner M, Back DF, Wohlmuth Alves dos Santos AJR, Beck J. 1-(2-biphenyl)-3-methyltriazenide-N-oxide as a template for intramolecular copper(II)⋯arene-π interactions. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2015.09.034] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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18
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Osuka A. Towardsmeso-meso-Linked Porphyrin Arrays andmeso-Aryl Expanded Porphyrins. CHEM REC 2014; 15:143-59. [DOI: 10.1002/tcr.201402050] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2014] [Indexed: 01/08/2023]
Affiliation(s)
- Atsuhiro Osuka
- Department of Chemistry; Graduate School of Science; Kyoto University; Sakyo-ku Kyoto 606-8502 Japan
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19
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Miecznikowski JR, Lynn MA, Jasinski JP, Lo W, Bak DW, Pati M, Butrick EE, Drozdoski AER, Archer KA, Villa CE, Lemons EG, Powers E, Siu M, Gomes CD, Bernier NA, Morio KN. Syntheses and characterization of five-coordinate copper(II) complexes based on tridentate SNS pincer ligand precursors. Polyhedron 2014. [DOI: 10.1016/j.poly.2014.03.020] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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20
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Miecznikowski JR, Lynn MA, Jasinski JP, Reinheimer E, Bak DW, Pati M, Butrick EE, Drozdoski AER, Archer KA, Villa CE, Lemons EG, Powers E, Siu M, Gomes CD, Morio KN. Synthesis, characterization, and computational study of three-coordinate SNS-copper(I) complexes based on bis-thione precursors. J COORD CHEM 2014. [DOI: 10.1080/00958972.2014.883070] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
| | - Matthew A. Lynn
- Department of Science and Mathematics, National Technical Institute for the Deaf, Rochester Institute of Technology, Rochester, NY, USA
| | | | - Eric Reinheimer
- Department of Chemistry, California State Polytechnic University Pomona, Pomona, CA, USA
| | - Daniel W. Bak
- Department of Chemistry and Molecular Biology, Cell Biology, and Biochemistry, Boston University, Boston, MA, USA
| | - Mekhala Pati
- Department of Chemistry and Molecular Biology, Cell Biology, and Biochemistry, Boston University, Boston, MA, USA
| | - Elizabeth E. Butrick
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | | | - Kerry A. Archer
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Christine E. Villa
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Elise G. Lemons
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Erin Powers
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Margaret Siu
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Camile D. Gomes
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
| | - Kaitlyn N. Morio
- Department of Chemistry and Biochemistry, Fairfield University, Fairfield, CT, USA
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21
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Karthik G, Srinivasan A, Suresh CH, Chandrashekar TK. Fused core-modified planar antiaromatic 32π heptaphyrins: unusual synthesis and structural diversity. Chem Commun (Camb) 2014; 50:12127-30. [DOI: 10.1039/c4cc05475j] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The novel core-modified fused heptaphyrins were synthesized and their 4nπ Hückel antiaromatic electronic strucuture was exploited.
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Affiliation(s)
- Ganesan Karthik
- School of Chemical Sciences
- National Institute of Science Education and Research (NISER)
- Institute of Physics Campus
- Bhubaneswar – 751 005, India
| | - A. Srinivasan
- School of Chemical Sciences
- National Institute of Science Education and Research (NISER)
- Institute of Physics Campus
- Bhubaneswar – 751 005, India
| | - C. H. Suresh
- CSIR-National Institute for Interdisciplinary Science and Technology
- Inorganic and Theoretical Chemistry Section, CSTD
- Thiruvananthapuram - 695 019, India
| | - Tavarekere K. Chandrashekar
- School of Chemical Sciences
- National Institute of Science Education and Research (NISER)
- Institute of Physics Campus
- Bhubaneswar – 751 005, India
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22
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Mori H, Lim JM, Kim D, Osuka A. Modulation of Dual Electronic Circuits of [26]Hexaphyrins Using Internal Aromatic Straps. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201308545] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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23
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Mori H, Lim JM, Kim D, Osuka A. Modulation of Dual Electronic Circuits of [26]Hexaphyrins Using Internal Aromatic Straps. Angew Chem Int Ed Engl 2013; 52:12997-3001. [DOI: 10.1002/anie.201308545] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2013] [Indexed: 11/10/2022]
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24
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Hemsworth GR, Taylor E, Kim RQ, Gregory RC, Lewis SJ, Turkenburg J, Parkin A, Davies GJ, Walton PH. The copper active site of CBM33 polysaccharide oxygenases. J Am Chem Soc 2013; 135:6069-77. [PMID: 23540833 PMCID: PMC3636778 DOI: 10.1021/ja402106e] [Citation(s) in RCA: 151] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2012] [Indexed: 12/16/2022]
Abstract
The capacity of metal-dependent fungal and bacterial polysaccharide oxygenases, termed GH61 and CBM33, respectively, to potentiate the enzymatic degradation of cellulose opens new possibilities for the conversion of recalcitrant biomass to biofuels. GH61s have already been shown to be unique metalloenzymes containing an active site with a mononuclear copper ion coordinated by two histidines, one of which is an unusual τ-N-methylated N-terminal histidine. We now report the structural and spectroscopic characterization of the corresponding copper CBM33 enzymes. CBM33 binds copper with high affinity at a mononuclear site, significantly stabilizing the enzyme. X-band EPR spectroscopy of Cu(II)-CBM33 shows a mononuclear type 2 copper site with the copper ion in a distorted axial coordination sphere, into which azide will coordinate as evidenced by the concomitant formation of a new absorption band in the UV/vis spectrum at 390 nm. The enzyme's three-dimensional structure contains copper, which has been photoreduced to Cu(I) by the incident X-rays, confirmed by X-ray absorption/fluorescence studies of both aqueous solution and intact crystals of Cu-CBM33. The single copper(I) ion is ligated in a T-shaped configuration by three nitrogen atoms from two histidine side chains and the amino terminus, similar to the endogenous copper coordination geometry found in fungal GH61.
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Affiliation(s)
- Glyn R. Hemsworth
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Edward
J. Taylor
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Robbert Q. Kim
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Rebecca C. Gregory
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Sally J. Lewis
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Johan
P. Turkenburg
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Alison Parkin
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Gideon J. Davies
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
| | - Paul H. Walton
- Department
of Chemistry, University of
York, Heslington, York YO10 5DD, United Kingdom
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25
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Osuka A, Tsurumaki E, Tanaka T. Subporphyrins: A Legitimate Ring-Contracted Porphyrin with Versatile Electronic and Optical Properties. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2011. [DOI: 10.1246/bcsj.20110118] [Citation(s) in RCA: 111] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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26
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Stępień M, Sprutta N, Latos-Grażyński L. Figure-Eight-Strukturen, Möbius-Bänder und mehr: Konformation und Aromatizität von Porphyrinoiden. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201003353] [Citation(s) in RCA: 156] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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27
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Stępień M, Sprutta N, Latos-Grażyński L. Figure Eights, Möbius Bands, and More: Conformation and Aromaticity of Porphyrinoids. Angew Chem Int Ed Engl 2011; 50:4288-340. [DOI: 10.1002/anie.201003353] [Citation(s) in RCA: 368] [Impact Index Per Article: 28.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2010] [Indexed: 11/08/2022]
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28
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Expandierte Porphyrine: überraschende Strukturen, elektronische Eigenschaften und Reaktivitäten. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201003909] [Citation(s) in RCA: 209] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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29
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Saito S, Osuka A. Expanded Porphyrins: Intriguing Structures, Electronic Properties, and Reactivities. Angew Chem Int Ed Engl 2011; 50:4342-73. [PMID: 21491551 DOI: 10.1002/anie.201003909] [Citation(s) in RCA: 530] [Impact Index Per Article: 40.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2010] [Indexed: 01/07/2023]
Affiliation(s)
- Shohei Saito
- Department of Chemistry, Graduate School of Science, Kyoto University
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30
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Yoneda T, Saito S, Yorimitsu H, Osuka A. Palladium(II)-Triggered Rearrangement of Heptaphyrins to N-Confused Porphyrins. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201100243] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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31
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Yoneda T, Saito S, Yorimitsu H, Osuka A. Palladium(II)-Triggered Rearrangement of Heptaphyrins to N-Confused Porphyrins. Angew Chem Int Ed Engl 2011; 50:3475-8. [DOI: 10.1002/anie.201100243] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2011] [Indexed: 11/10/2022]
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32
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Sakamoto R, Saito S, Shimizu S, Inokuma Y, Aratani N, Osuka A. meso-Trifluoromethyl-substituted Subporphyrin from Ring-splitting Reaction ofmeso-Trifluoromethyl-substituted [32]Heptaphyrin(1.1.1.1.1.1.1). CHEM LETT 2010. [DOI: 10.1246/cl.2010.439] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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33
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Wojaczyński J, Latos-Grażyński L. Photooxidation of N-Confused Porphyrin: A Route to N-Confused Biliverdin Analogues. Chemistry 2010; 16:2679-82. [DOI: 10.1002/chem.200903182] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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34
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Saito S, Furukawa K, Osuka A. Fully π-Conjugated Helices from Oxidative Cleavage of meso-Aryl-Substituted Expanded Porphyrins. J Am Chem Soc 2010; 132:2128-9. [DOI: 10.1021/ja909929s] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Shohei Saito
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan, and Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Ko Furukawa
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan, and Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Atsuhiro Osuka
- Department of Chemistry, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan, and Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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35
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Chmielewski P. Glückszahl Sieben: Charakterisierung stabiler, T-förmiger Kupfer(II)-Komplexe von [32]Heptaphyrinen. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200905577] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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36
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Chmielewski P. Lucky Seven: Characterization of Stable T-Shaped Copper(II) Complexes of [32]Heptaphyrins. Angew Chem Int Ed Engl 2009; 49:1359-61. [DOI: 10.1002/anie.200905577] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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