1
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Wang W, Xi H, Fu D, Ma D, Gong W, Zhao Y, Li X, Wu L, Guo Y, Zhao G, Wang H. Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages. J Am Chem Soc 2024; 146:11657-11668. [PMID: 38641862 DOI: 10.1021/jacs.3c13830] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/21/2024]
Abstract
All protein-directed syntheses of metal nanoclusters (NCs) and nanoparticles (NPs) have attracted considerable attention because protein scaffolds provide a unique metal coordination environment and can adjust the shape and morphology of NCs and NPs. However, the detailed formation mechanisms of NCs or NPs directed by protein templates remain unclear. In this study, by taking advantage of the ferritin nanocage as a biotemplate to monitor the growth of Fe-O NCs as a function of time, we synthesized a series of iron NCs with different sizes and shapes and subsequently solved their corresponding three-dimensional atomic-scale structures by X-ray protein crystallography and cryo-electron microscopy. The time-dependent structure analyses revealed the growth process of these Fe-O NCs with the 4-fold channel of ferritin as nucleation sites. To our knowledge, the newly biosynthesized Fe35O23Glu12 represents the largest Fe-O NCs with a definite atomic structure. This study contributes to our understanding of the formation mechanism of iron NCs and provides an effective method for metal NC synthesis.
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Affiliation(s)
- Wenming Wang
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
| | - Hongfang Xi
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
| | - Dan Fu
- State Key Laboratory of Medicinal Chemical Biology and College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Danyang Ma
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
| | - Wenjun Gong
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
| | - Yaqin Zhao
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
| | - Xiaomei Li
- Shanxi Provincial Key Laboratory of Protein Structure Determination, Shanxi Academy of Advanced Research and Innovation, Taiyuan 030012, China
| | - Lijie Wu
- IHuman Institute, ShanghaiTech University, Shanghai 201210, China
| | - Yu Guo
- State Key Laboratory of Medicinal Chemical Biology and College of Pharmacy, Nankai University, Tianjin 300071, China
| | - Guanghua Zhao
- College of Food Science & Nutritional Engineering, China Agricultural University, Beijing 100083, China
| | - Hongfei Wang
- Key Laboratory of Chemical Biology and Molecular Engineering of the Education Ministry, Institute of Molecular Science, Shanxi University, Taiyuan 030006, China
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2
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Chen K, Luo Y, Sun M, Liu C, Jia M, Fu C, Shen X, Li C, Zheng X, Pu X, Huang Y, Lu Z. Acquiring Charge-Transfer-Featured Single-Molecule Ultralong Organic Room Temperature Phosphorescence via Through-Space Electronic Coupling. Angew Chem Int Ed Engl 2024; 63:e202314447. [PMID: 37968894 DOI: 10.1002/anie.202314447] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 11/08/2023] [Accepted: 11/15/2023] [Indexed: 11/17/2023]
Abstract
Although long-lived triplet charge-transfer (3 CT) state with high energy level has gained significant attention, the development of organic small molecules capable of achieving such states remains a major challenge. Herein, by using the through-space electronic coupling effect, we have developed a compound, namely NIC-DMAC, which has a long-lived 3 CT state at the single-molecule level with a lifetime of 210 ms and a high energy level of up to 2.50 eV. Through a combination of experimental and computational approaches, we have elucidated the photophysical processes of NIC-DMAC, which involve sequential transitions from the first singlet excited state (S1 ) that shows a 1 CT character to the first triplet excited state (T1 ) that exhibits a local excited state feature (3 LE), and then to the second triplet excited state (T2 ) that shows a 3 CT character (i.e., S1 (1 CT)→T1 (3 LE)→T2 (3 CT)). The long lifetime and high energy level of its 3 CT state have enabled NIC-DMAC as an initiator for photocuring in double patterning applications.
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Affiliation(s)
- Kuan Chen
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Yanju Luo
- Analytical & Testing Center, Sichuan University, Chengdu, 610064, China
| | - Ming Sun
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Chuanhao Liu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Mengjiao Jia
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Caixia Fu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Xingsha Shen
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Chuan Li
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Xujun Zheng
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Xuemei Pu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Yan Huang
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
| | - Zhiyun Lu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, Chengdu, 610064, China
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3
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Zhao X, He S, Wang J, Ding J, Zong S, Li G, Sun W, Du J, Fan J, Peng X. Near-Infrared Self-Assembled Hydroxyl Radical Generator Based on Photoinduced Cascade Electron Transfer for Hypoxic Tumor Phototherapy. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2305163. [PMID: 37545041 DOI: 10.1002/adma.202305163] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 07/22/2023] [Indexed: 08/08/2023]
Abstract
The hydroxyl radical (•OH) is an extremely potent reactive oxygen species that plays a crucial role in photooxidations within the realm of hypoxic tumor therapy. However, the current methods for •OH photogeneration typically rely on inorganic materials that require UV/vis light excitation. Consequently, photogenerators based on organic molecules, especially those utilizing near-infrared (NIR) light excitation, are rare. In this study, the concept of photoinduced cascade charge transfer (PICET), which utilizes NIR heavy-atom-free photosensitizers (ANOR-Cy5) to generate •OH is introduced. The ANOR-Cy5 photosensitizer, with its flexible hydrophobic structure, enables the formation of nanoparticles in aqueous solutions through molecular assembly. PICET involves a symmetry-breaking charge separation-induced localized charge-separated state, transitioning to a delocalized charge-separated state, which governs the efficiency of •OH generation. Thanks to the oxygen-independent nature of •OH generation and its robust oxidative properties, the ANOR-Cy5-based photosensitizer demonstrates highly effective photoinduced anti-cancer effects, even under severely hypoxic conditions. This discovery emphasizes the potential for achieving •OH photogeneration using a single organic molecule through the engineering of molecular self-assembly, thereby opening up new possibilities for phototherapy and beyond.
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Affiliation(s)
- Xueze Zhao
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA
| | - Shan He
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, P. R. China
| | - Junfeng Wang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, P. R. China
| | - Junying Ding
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Shenglin Zong
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Guohui Li
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, P. R. China
| | - Wen Sun
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Jianjun Du
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Jiangli Fan
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
| | - Xiaojun Peng
- State Key Laboratory of Fine Chemicals, Frontiers Science Center for Smart Materials, Oriented Chemical Engineering, School of Chemical Engineering, Dalian University of Technology, Dalian, 116024, China
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4
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Liang H, Lu M, Mahmood Z, Li Z, Chen Z, Chen G, Li MD, Huo Y, Ji S. Efficient Intersystem Crossing and Long-lived Charge-Separated State Induced by Through-Space Intramolecular Charge Transfer in a Parallel Geometry Carbazole-Bodipy Dyad. Angew Chem Int Ed Engl 2023; 62:e202312600. [PMID: 37654187 DOI: 10.1002/anie.202312600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2023] [Accepted: 08/31/2023] [Indexed: 09/02/2023]
Abstract
The design of efficient heavy atom-free triplet photosensitizers (PSs) based on through bond charge transfer (TBCT) features is a formidable challenge due to the criteria of orthogonal donor-acceptor geometry. Herein, we propose using parallel (face-to-face) conformation carbazole-bodipy donor-acceptor dyads (BCZ-1 and BCZ-2) featuring through space intramolecular charge transfer (TSCT) process as efficient triplet PS. Efficient intersystem crossing (ΦΔ =61 %) and long-lived triplet excited state (τT =186 μs) were observed in the TSCT dyad BCZ-1 compared to BCZ-3 (ΦΔ =0.4 %), the dyad involving TBCT, demonstrating the superiority of the TSCT approach over conventional donor-acceptor system. Moreover, the transient absorption study revealed that TSCT dyads have a faster charge separation and slower intersystem crossing process induced by charge recombination compared to TBCT dyad. A long-lived charge-separated state (CSS) was observed in the BCZ-1 (τCSS =24 ns). For the first time, the TSCT dyad was explored for the triplet-triplet annihilation upconversion, and a high upconversion quantum yield of 11 % was observed. Our results demonstrate a new avenue for designing efficient PSs and open up exciting opportunities for future research in this field.
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Affiliation(s)
- Hui Liang
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Manlin Lu
- College of Chemistry and Chemical Engineering, and Key Laboratory for Preparation and Application of Ordered Structural Materials of Guangdong Province, Shantou University, Shantou, 515063, P. R. China
| | - Zafar Mahmood
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Zheng Li
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Zeduan Chen
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Guowei Chen
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Ming-De Li
- College of Chemistry and Chemical Engineering, and Key Laboratory for Preparation and Application of Ordered Structural Materials of Guangdong Province, Shantou University, Shantou, 515063, P. R. China
| | - Yanping Huo
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
| | - Shaomin Ji
- School of Chemical Engineering and Light Industry, Guangdong University of Technology, Guangzhou, 510006, P. R. China
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5
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Bai X, Li P, Peng W, Chen N, Lin JL, Li Y. Ionogel-Electrode for the Study of Protein Tunnel Junctions under Physiologically Relevant Conditions. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023:e2300663. [PMID: 36965118 DOI: 10.1002/adma.202300663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Revised: 03/08/2023] [Indexed: 05/15/2023]
Abstract
The study of charge transport through proteins is essential for understanding complicated electrochemical processes in biological activities while the reasons for the coexistence of tunneling and hopping phenomena in protein junctions still remain unclear. In this work, a flexible and conductive ionogel electrode is synthesized and is used as a top contact to form highly reproducible protein junctions. The junctions of proteins, including human serum albumin, cytochrome C and hemoglobin, show temperature-independent electron tunneling characteristics when the junctions are in solid states while with a different mechanism of temperature-dependent electron hopping when junctions are hydrated under physiologically relevant conditions. It is demonstrated that the solvent reorganization energy plays an important role in the electron-hopping process and experimentally shown that it requires ≈100 meV for electron hopping through one heme group inside a hydrated protein molecule connected between two electrodes.
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Affiliation(s)
- Xiyue Bai
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
| | - Pengfei Li
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
| | - Wuxian Peng
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
| | - Ningyue Chen
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
| | - Jin-Liang Lin
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
| | - Yuan Li
- Key Laboratory of Organic Optoelectronics and Molecular Engineering and Laboratory of Flexible Electronics Technology, Department of Chemistry, Tsinghua University, 100084, Beijing, China
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6
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Thaggard GC, Leith GA, Sosnin D, Martin CR, Park KC, McBride MK, Lim J, Yarbrough BJ, Maldeni Kankanamalage BKP, Wilson GR, Hill AR, Smith MD, Garashchuk S, Greytak AB, Aprahamian I, Shustova NB. Confinement-Driven Photophysics in Hydrazone-Based Hierarchical Materials. Angew Chem Int Ed Engl 2023; 62:e202211776. [PMID: 36346406 DOI: 10.1002/anie.202211776] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Indexed: 11/09/2022]
Abstract
Confinement-imposed photophysics was probed for novel stimuli-responsive hydrazone-based compounds demonstrating a conceptual difference in their behavior within 2D versus 3D porous matrices for the first time. The challenges associated with photoswitch isomerization arising from host interactions with photochromic compounds in 2D scaffolds could be overcome in 3D materials. Solution-like photoisomerization rate constants were realized for sterically demanding hydrazone derivatives in the solid state through their coordinative immobilization in 3D scaffolds. According to steady-state and time-resolved photophysical measurements and theoretical modeling, this approach provides access to hydrazone-based materials with fast photoisomerization kinetics in the solid state. Fast isomerization of integrated hydrazone derivatives allows for probing and tailoring resonance energy transfer (ET) processes as a function of excitation wavelength, providing a novel pathway for ET modulation.
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Affiliation(s)
- Grace C Thaggard
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Gabrielle A Leith
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Daniil Sosnin
- Department of Chemistry, Dartmouth College, Hanover, NH 03755, USA
| | - Corey R Martin
- Savannah River National Laboratory, Aiken, SC 29808, USA
| | - Kyoung Chul Park
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Margaret K McBride
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Jaewoong Lim
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Brandon J Yarbrough
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | | | - Gina R Wilson
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Austin R Hill
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Mark D Smith
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Sophya Garashchuk
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Andrew B Greytak
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
| | - Ivan Aprahamian
- Department of Chemistry, Dartmouth College, Hanover, NH 03755, USA
| | - Natalia B Shustova
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA
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7
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Santos NAPD, Silva AB, Silva CFND, Alexiou ADP, Nikolaou S. A novel triruthenium nitrosyl bearing a quinolinic ligand: a comparison of its spectroscopic behavior with its pyridine analogues. NEW J CHEM 2022. [DOI: 10.1039/d1nj05849e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A comparative analysis of ruthenium nitrosyl spectroscopic data helps unravel the electronic character of the unit {RuNO}6[RuIIIRuIIIO].
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Affiliation(s)
- Nicolle Azevedo Portela dos Santos
- Departamento de Química, Laboratório de Atividade Biológica e Química Supramolecular de Compostos de Coordenação (LABIQSC2), Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Av. Bandeirantes 3900, 14040-901, Ribeirão Preto - SP, Brazil
| | - Amanda Batista Silva
- Departamento de Química, Laboratório de Atividade Biológica e Química Supramolecular de Compostos de Coordenação (LABIQSC2), Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Av. Bandeirantes 3900, 14040-901, Ribeirão Preto - SP, Brazil
| | - Camila Fontes Neves da Silva
- Departamento de Bioquímica, Laboratório de Processos Fotoinduzidos e Interfaces (LPFI), Instituto de Química, Universidade de São Paulo, São Paulo, Brazil
| | - Anamaria Dia Pereira Alexiou
- Departamento de Química, Laboratório de Atividade Biológica e Química Supramolecular de Compostos de Coordenação (LABIQSC2), Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Av. Bandeirantes 3900, 14040-901, Ribeirão Preto - SP, Brazil
| | - Sofia Nikolaou
- Departamento de Química, Laboratório de Atividade Biológica e Química Supramolecular de Compostos de Coordenação (LABIQSC2), Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Av. Bandeirantes 3900, 14040-901, Ribeirão Preto - SP, Brazil
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8
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Kojima M, Abe S, Ueno T. Engineering of protein crystals for use as solid biomaterials. Biomater Sci 2021; 10:354-367. [PMID: 34928275 DOI: 10.1039/d1bm01752g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Protein crystals have attracted a great deal of attention as solid biomaterials because they have porous structures created by regular assemblies of proteins. The lattice structures of protein crystals are controlled by designing molecular interfacial interactions via covalent bonds and non-covalent bonds. Protein crystals have been functionalized as templates to immobilize foreign molecules such as metal nanoparticles, metal complexes, and proteins. These hybrid crystals are used as functional materials for catalytic reactions and structural analysis. Furthermore, in-cell protein crystals have been studied extensively, providing progress in rapid protein crystallization and crystallography. This review highlights recent advances in crystal engineering for protein crystallization and generation of solid functional materials both in vitro and within cells.
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Affiliation(s)
- Mariko Kojima
- School of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta 4259-B55, Midori-ku, Yokohama 226-8501, Japan.
| | - Satoshi Abe
- School of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta 4259-B55, Midori-ku, Yokohama 226-8501, Japan.
| | - Takafumi Ueno
- School of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta 4259-B55, Midori-ku, Yokohama 226-8501, Japan.
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9
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Partridge BE, Winegar PH, Han Z, Mirkin CA. Redefining Protein Interfaces within Protein Single Crystals with DNA. J Am Chem Soc 2021; 143:8925-8934. [PMID: 34096291 PMCID: PMC8381744 DOI: 10.1021/jacs.1c04191] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Proteins are exquisite nanoscale building blocks: molecularly pure, chemically addressable, and inherently selective for their evolved function. The organization of proteins into single crystals with high positional, orientational, and translational order results in materials where the location of every atom can be known. However, controlling the organization of proteins is challenging due to the myriad interactions that define protein interfaces within native single crystals. Recently, we discovered that introducing a single DNA-DNA interaction between protein surfaces leads to changes in the packing of proteins within single crystals and the protein-protein interactions (PPIs) that arise. However, modifying specific PPIs to effect deliberate changes to protein packing is an unmet challenge. In this work, we hypothesized that disrupting and replacing a highly conserved PPI with a DNA-DNA interaction would enable protein packing to be modulated by exploiting the programmability of the introduced oligonucleotides. Using concanavalin A (ConA) as a model protein, we circumvent potentially deleterious mutagenesis and exploit the selective binding of ConA toward mannose to noncovalently attach DNA to the protein surface. We show that DNA association eliminates the major PPI responsible for crystallization of native ConA, thereby allowing subtle changes to DNA design (length, complementarity, and attachment position) to program distinct changes to ConA packing, including the realization of three novel crystal structures and the deliberate expansion of ConA packing along a single crystallographic axis. These findings significantly enhance our understanding of how DNA can supersede native PPIs to program protein packing within ordered materials.
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Affiliation(s)
- Benjamin E Partridge
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Peter H Winegar
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Zhenyu Han
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
| | - Chad A Mirkin
- Department of Chemistry and International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
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10
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Liu D, El-Zohry AM, Taddei M, Matt C, Bussotti L, Wang Z, Zhao J, Mohammed OF, Di Donato M, Weber S. Long-Lived Charge-Transfer State Induced by Spin-Orbit Charge Transfer Intersystem Crossing (SOCT-ISC) in a Compact Spiro Electron Donor/Acceptor Dyad. Angew Chem Int Ed Engl 2020; 59:11591-11599. [PMID: 32270586 PMCID: PMC7496792 DOI: 10.1002/anie.202003560] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Indexed: 11/13/2022]
Abstract
We prepared conceptually novel, fully rigid, spiro compact electron donor (Rhodamine B, lactam form, RB)/acceptor (naphthalimide; NI) orthogonal dyad to attain the long‐lived triplet charge‐transfer (3CT) state, based on the electron spin control using spin‐orbit charge transfer intersystem crossing (SOCT‐ISC). Transient absorption (TA) spectra indicate the first charge separation (CS) takes place within 2.5 ps, subsequent SOCT‐ISC takes 8 ns to produce the 3NI* state. Then the slow secondary CS (125 ns) gives the long‐lived 3CT state (0.94 μs in deaerated n‐hexane) with high energy level (ca. 2.12 eV). The cascade photophysical processes of the dyad upon photoexcitation are summarized as 1NI*→1CT→3NI*→3CT. With time‐resolved electron paramagnetic resonance (TREPR) spectra, an EEEAAA electron‐spin polarization pattern was observed for the naphthalimide‐localized triplet state. Our spiro compact dyad structure and the electron spin‐control approach is different to previous methods for which invoking transition‐metal coordination or chromophores with intrinsic ISC ability is mandatory.
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Affiliation(s)
- Dongyi Liu
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, Dalian University of Technology, 2 Ling Gong Road, Dalian, 116024, China
| | - Ahmed M El-Zohry
- Division of Physical Sciences and Engineering, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia
| | - Maria Taddei
- LENS (European Laboratory for Non-Linear Spectroscopy), via N. Carrara 1, 50019, Sesto Fiorentino (FI), Italy
| | - Clemens Matt
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg, Germany
| | - Laura Bussotti
- LENS (European Laboratory for Non-Linear Spectroscopy), via N. Carrara 1, 50019, Sesto Fiorentino (FI), Italy
| | - Zhijia Wang
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, Dalian University of Technology, 2 Ling Gong Road, Dalian, 116024, China
| | - Jianzhang Zhao
- State Key Laboratory of Fine Chemicals, School of Chemical Engineering, Dalian University of Technology, 2 Ling Gong Road, Dalian, 116024, China
| | - Omar F Mohammed
- Division of Physical Sciences and Engineering, King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia
| | - Mariangela Di Donato
- LENS (European Laboratory for Non-Linear Spectroscopy), via N. Carrara 1, 50019, Sesto Fiorentino (FI), Italy.,ICCOM-CNR, via Madonna del Piano 10, 50019, Sesto Fiorentino (FI), Italy
| | - Stefan Weber
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, 79104, Freiburg, Germany
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11
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Liu D, El‐Zohry AM, Taddei M, Matt C, Bussotti L, Wang Z, Zhao J, Mohammed OF, Di Donato M, Weber S. Long‐Lived Charge‐Transfer State Induced by Spin‐Orbit Charge Transfer Intersystem Crossing (SOCT‐ISC) in a Compact Spiro Electron Donor/Acceptor Dyad. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202003560] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Dongyi Liu
- State Key Laboratory of Fine Chemicals School of Chemical Engineering Dalian University of Technology 2 Ling Gong Road Dalian 116024 China
| | - Ahmed M. El‐Zohry
- Division of Physical Sciences and Engineering King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Kingdom of Saudi Arabia
| | - Maria Taddei
- LENS (European Laboratory for Non-Linear Spectroscopy) via N. Carrara 1 50019 Sesto Fiorentino (FI) Italy
| | - Clemens Matt
- Institute of Physical Chemistry Albert-Ludwigs-Universität Freiburg Albertstrasse 21 79104 Freiburg Germany
| | - Laura Bussotti
- LENS (European Laboratory for Non-Linear Spectroscopy) via N. Carrara 1 50019 Sesto Fiorentino (FI) Italy
| | - Zhijia Wang
- State Key Laboratory of Fine Chemicals School of Chemical Engineering Dalian University of Technology 2 Ling Gong Road Dalian 116024 China
| | - Jianzhang Zhao
- State Key Laboratory of Fine Chemicals School of Chemical Engineering Dalian University of Technology 2 Ling Gong Road Dalian 116024 China
| | - Omar F. Mohammed
- Division of Physical Sciences and Engineering King Abdullah University of Science and Technology (KAUST) Thuwal 23955-6900 Kingdom of Saudi Arabia
| | - Mariangela Di Donato
- LENS (European Laboratory for Non-Linear Spectroscopy) via N. Carrara 1 50019 Sesto Fiorentino (FI) Italy
- ICCOM-CNR via Madonna del Piano 10 50019 Sesto Fiorentino (FI) Italy
| | - Stefan Weber
- Institute of Physical Chemistry Albert-Ludwigs-Universität Freiburg Albertstrasse 21 79104 Freiburg Germany
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12
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Benavides BS, Valandro S, Cioloboc D, Taylor AB, Schanze KS, Kurtz DM. Structure of a Zinc Porphyrin-Substituted Bacterioferritin and Photophysical Properties of Iron Reduction. Biochemistry 2020; 59:1618-1629. [PMID: 32283930 PMCID: PMC7927158 DOI: 10.1021/acs.biochem.9b01103] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The iron storage protein bacterioferritin (Bfr) binds up to 12 hemes b at specific sites in its protein shell. The heme b can be substituted with the photosensitizer Zn(II)-protoporphyrin IX (ZnPP), and photosensitized reductive iron release from the ferric oxyhydroxide {[FeO(OH)]n} core inside the ZnPP-Bfr protein shell was demonstrated [Cioloboc, D., et al. (2018) Biomacromolecules 19, 178-187]. This report describes the X-ray crystal structure of ZnPP-Bfr and the effects of loaded iron on the photophysical properties of the ZnPP. The crystal structure of ZnPP-Bfr shows a unique six-coordinate zinc in the ZnPP with two axial methionine sulfur ligands. Steady state and transient ultraviolet-visible absorption and luminescence spectroscopies show that irradiation with light overlapping the Soret absorption causes oxidation of ZnPP to the cation radical ZnPP•+ only when the ZnPP-Bfr is loaded with [FeO(OH)]n. Femtosecond transient absorption spectroscopy shows that this photooxidation occurs from the singlet excited state (1ZnPP*) on the picosecond time scale and is consistent with two oxidizing populations of Fe3+, which do not appear to involve the ferroxidase center iron. We propose that [FeO(OH)]n clusters at or near the inner surface of the protein shell are responsible for ZnPP photooxidation. Hopping of the photoinjected electrons through the [FeO(OH)]n would effectively cause migration of Fe2+ through the inner cavity to pores where it exits the protein. Reductive iron mobilization is presumed to be a physiological function of Bfrs. The phototriggered Fe3+ reduction could be used to identify the sites of iron mobilization within the Bfr protein shell.
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Affiliation(s)
- Brenda S Benavides
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Silvano Valandro
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Daniela Cioloboc
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Alexander B Taylor
- Department of Biochemistry and Structural Biology and X-ray Crystallography Core Laboratory, University of Texas Health Science Center at San Antonio (UT Health San Antonio), San Antonio, Texas 78229, United States
| | - Kirk S Schanze
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
| | - Donald M Kurtz
- Department of Chemistry, University of Texas at San Antonio, San Antonio, Texas 78249, United States
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13
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Huang J, Ferlez BH, Young EJ, Kerfeld CA, Kramer DM, Ducat DC. Functionalization of Bacterial Microcompartment Shell Proteins With Covalently Attached Heme. Front Bioeng Biotechnol 2020; 7:432. [PMID: 31993414 PMCID: PMC6962350 DOI: 10.3389/fbioe.2019.00432] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 12/05/2019] [Indexed: 12/26/2022] Open
Abstract
Heme is a versatile redox cofactor that has considerable potential for synthetic biology and bioelectronic applications. The capacity to functionalize non-heme-binding proteins with covalently bound heme moieties in vivo could expand the variety of bioelectronic materials, particularly if hemes could be attached at defined locations so as to facilitate position-sensitive processes like electron transfer. In this study, we utilized the cytochrome maturation system I to develop a simple approach that enables incorporation of hemes into the backbone of target proteins in vivo. We tested our methodology by targeting the self-assembling bacterial microcompartment shell proteins, and inserting functional hemes at multiple locations in the protein backbone. We found substitution of three amino acids on the target proteins promoted heme attachment with high occupancy. Spectroscopic measurements suggested these modified proteins covalently bind low-spin hemes, with relative low redox midpoint potentials (about -210 mV vs. SHE). Heme-modified shell proteins partially retained their self-assembly properties, including the capacity to hexamerize, and form inter-hexamer attachments. Heme-bound shell proteins demonstrated the capacity to integrate into higher-order shell assemblies, however, the structural features of these macromolecular complexes was sometimes altered. Altogether, we report a versatile strategy for generating electron-conductive cytochromes from structurally-defined proteins, and provide design considerations on how heme incorporation may interface with native assembly properties in engineered proteins.
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Affiliation(s)
- Jingcheng Huang
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
| | - Bryan H. Ferlez
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
| | - Eric J. Young
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
| | - Cheryl A. Kerfeld
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
- Environmental Genomics and Systems Biology and Molecular Biophysics and Integrated Bioimaging Divisions, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
| | - David M. Kramer
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
| | - Daniel C. Ducat
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Biochemistry & Molecular Biology, Michigan State University, East Lansing, MI, United States
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14
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Benavides BS, Acharya R, Clark ER, Basak P, Maroney MJ, Nocek JM, Schanze KS, Kurtz DM. Structural, Photophysical, and Photochemical Characterization of Zinc Protoporphyrin IX in a Dimeric Variant of an Iron Storage Protein: Insights into the Mechanism of Photosensitized H 2 Generation. J Phys Chem B 2019; 123:6740-6749. [PMID: 31294990 DOI: 10.1021/acs.jpcb.9b04817] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Some of us have previously reported the preparation of a dimeric form of the iron storage protein, bacterioferritin (Bfr), in which the native heme b is substituted with the photosensitizer, Zn(II)-protoporphyrin IX (ZnPP-Bfr dimer). We further showed that the ZnPP-Bfr dimer can serve as a photosensitizer for platinum-catalyzed H2 generation in aqueous solution without the usually added electron relay between photosensitizer and platinum ( Clark , E. R. , Inorg. Chem. 2017 , 56 , 4584 - 4593 ). We proposed reductive or oxidative quenching pathways involving the ZnPP anion radical (ZnPP•-) or the ZnPP cation radical, (ZnPP•+), respectively. The present report describes structural, photophysical, and photochemical properties of the ZnPP in the ZnPP-Bfr dimer. X-ray absorption spectroscopic studies at 10 K showed a mixture of five- and six-coordinated Zn centers with axial coordination by one long Zn-SγMet distance of ∼2.8 Å and ∼40% having an additional shorter Zn-S distance of ∼2.4 Å, in addition to the expected 4 nitrogen atom coordination from the porphyrin. The ZnPP in ZnPP-Bfr dimer was prone to photosensitized oxidation to ZnPP•+. The ZnPP•+ was rapidly reduced by ascorbic acid, which we previously determined was essential for photosensitized H2 production in this system. These results are consistent with an oxidative quenching pathway involving electron transfer from 3ZnPP* to platinum, which may be assisted by a flexible ZnPP axial coordination sphere. However, the low quantum yield for H2 production (∼1%) in this system could make reductive quenching difficult to detect, and can, therefore, not be completely ruled out. The ZnPP-Bfr dimer provides a simple but versatile framework for mechanistic assessment and optimization of porphyrin-photosensitized H2 generation without an electron relay between porphyrin and the platinum catalyst.
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Affiliation(s)
- Brenda S Benavides
- Department of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States
| | - Rajendra Acharya
- Department of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States
| | - Emily R Clark
- Department of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States
| | - Priyanka Basak
- Department of Chemistry , University of Massachusetts , Amherst , Massachusetts 01003 , United States
| | - Michael J Maroney
- Department of Chemistry , University of Massachusetts , Amherst , Massachusetts 01003 , United States
| | - Judith M Nocek
- Department of Chemistry , Northwestern University , Evanston , Illinois 60208 , United States
| | - Kirk S Schanze
- Department of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States
| | - Donald M Kurtz
- Department of Chemistry , University of Texas at San Antonio , San Antonio , Texas 78249 , United States
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15
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Photoinduced electron transfer within supramolecular hemoprotein co-assemblies and heterodimers containing Fe and Zn porphyrins. J Inorg Biochem 2019; 193:42-51. [DOI: 10.1016/j.jinorgbio.2019.01.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 01/03/2019] [Indexed: 12/11/2022]
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16
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Nguyen TK, Negishi H, Abe S, Ueno T. Construction of supramolecular nanotubes from protein crystals. Chem Sci 2019; 10:1046-1051. [PMID: 30774900 PMCID: PMC6346403 DOI: 10.1039/c8sc04167a] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Accepted: 10/26/2018] [Indexed: 01/26/2023] Open
Abstract
Investigations involving the design of protein assemblies for the development of biomaterials are receiving significant attention. In nature, proteins can be driven into assemblies frequently by various non-covalent interactions. Assembly of proteins into supramolecules can be conducted under limited conditions in solution. These factors force the assembly process into an equilibrium state with low stability. Here, we report a new method for preparing assemblies using protein crystals as non-equilibrium molecular scaffolds. Protein crystals provide an ideal environment with a highly ordered packing of subunits in which the supramolecular assembled structures are formed in the crystalline matrix. Based on this feature, we demonstrate the self-assembly of supramolecular nanotubes constructed from protein crystals triggered by co-oxidation with cross-linkers. The assembly of tubes is driven by the formation of disulfide bonds to retain the intermolecular interactions within each assembly in the crystalline matrix after dissolution of the crystals.
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Affiliation(s)
- Tien Khanh Nguyen
- School of Life Science and Technology , Tokyo Institute of Technology , Nagatsuta-cho , Midori-ku , Yokohama 226-8501 , Japan .
| | - Hashiru Negishi
- School of Life Science and Technology , Tokyo Institute of Technology , Nagatsuta-cho , Midori-ku , Yokohama 226-8501 , Japan .
| | - Satoshi Abe
- School of Life Science and Technology , Tokyo Institute of Technology , Nagatsuta-cho , Midori-ku , Yokohama 226-8501 , Japan .
| | - Takafumi Ueno
- School of Life Science and Technology , Tokyo Institute of Technology , Nagatsuta-cho , Midori-ku , Yokohama 226-8501 , Japan .
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17
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Negishi H, Abe S, Yamashita K, Hirata K, Niwase K, Boudes M, Coulibaly F, Mori H, Ueno T. Supramolecular protein cages constructed from a crystalline protein matrix. Chem Commun (Camb) 2018; 54:1988-1991. [PMID: 29405208 DOI: 10.1039/c7cc08689j] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Protein crystals are formed via ordered arrangements of proteins, which assemble to form supramolecular structures. Here, we show a method for the assembly of supramolecular protein cages within a crystalline environment. The cages are stabilized by covalent cross-linking allowing their release via dissolution of the crystal. The high stability of the desiccated protein crystals allows cages to be constructed.
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Affiliation(s)
- Hashiru Negishi
- School of Life Science and Technology, Tokyo Institute of Technology, Nagatsuta-cho, Midori-ku, Yokohama 226-8501, Japan.
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18
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Mashima T, Oohora K, Hayashi T. Successive energy transfer within multiple photosensitizers assembled in a hexameric hemoprotein scaffold. Phys Chem Chem Phys 2018; 20:3200-3209. [PMID: 29067390 DOI: 10.1039/c7cp05257j] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
An assembly of multiple photosensitizers is demonstrated by development of a hexameric hemoprotein (HTHP) scaffold as a light harvesting model to replicate the successive energy transfer occuring within photosensitizer assemblies of natural systems. In our model, six zinc protoporphyrin IX (ZnPP) molecules are arrayed at the heme binding site of HTHP by supramolecular interactions and five fluorescein (Flu) molecules and one Texas Red (Tex) molecule as donor and acceptor photosensitizers, respectively, are attached to the HTHP protein surface with covalent linkages. The flow of excited energy from photoexcited Flu to Tex occurs via two pathways: direct energy transfer from Flu to Tex (path 1) and energy transfer via ZnPP (path 2). Steady state and time-resolved fluorescence measurements reveal that the energy transfer ratio of these pathways (path 1 : path 2) is 39 : 61. These findings indicate that the excited energy originating at five Flu and six ZnPP molecules is collected at one Tex molecule as a funnel-like bottom for light harvesting. The present system using the hexameric hemoprotein scaffold is a promising candidate for construction of an artificial light harvesting system having multiple photosensitizers to promote efficient use of solar energy.
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Affiliation(s)
- Tsuyoshi Mashima
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita 565-0871, Japan.
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19
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Abe S, Maity B, Ueno T. Design of a confined environment using protein cages and crystals for the development of biohybrid materials. Chem Commun (Camb) 2018; 52:6496-512. [PMID: 27032539 DOI: 10.1039/c6cc01355d] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
There is growing interest in the design of protein assemblies for use in materials science and bionanotechnology. Protein assemblies, such as cages and crystalline protein structures, provide confined chemical environments that allow immobilization of metal complexes, nanomaterials, and proteins by metal coordination, assembly/disassembly reactions, genetic manipulation and crystallization methods. Protein assembly composites can be used to prepare hybrid materials with catalytic, magnetic and optical properties for cellular applications due to their high stability, solubility and biocompatibility. In this feature article, we focus on the recent development of ferritin as the most promising molecular template protein cage and in vivo and in vitro engineering of protein crystals as solid protein materials with functional properties.
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Affiliation(s)
- Satoshi Abe
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechonology, Tokyo Institute of Techonology, B-55, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8501, Japan.
| | - Basudev Maity
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechonology, Tokyo Institute of Techonology, B-55, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8501, Japan.
| | - Takafumi Ueno
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechonology, Tokyo Institute of Techonology, B-55, 4259 Nagatsuta-cho, Midori-ku, Yokohama 226-8501, Japan.
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20
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Functionalization of protein crystals with metal ions, complexes and nanoparticles. Curr Opin Chem Biol 2017; 43:68-76. [PMID: 29245143 DOI: 10.1016/j.cbpa.2017.11.015] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Revised: 11/09/2017] [Accepted: 11/26/2017] [Indexed: 01/08/2023]
Abstract
Self-assembled proteins have specific functions in biology. With inspiration provided by natural protein systems, several artificial protein assemblies have been constructed via site-specific mutations or metal coordination, which have important applications in catalysis, material and bio-supramolecular chemistry. Similar to natural protein assemblies, protein crystals have been recognized as protein assemblies formed of densely-packed monomeric proteins. Protein crystals can be functionalized with metal ions, metal complexes or nanoparticles via soaking, co-crystallization, creating new metal binding sites by site-specific mutations. The field of protein crystal engineering with metal coordination is relatively new and has gained considerable attention for developing solid biomaterials as well as structural investigations of enzymatic reactions, growth of nanoparticles and catalysis. This review highlights recent and significant research on functionalization of protein crystals with metal coordination and future prospects.
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21
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Schmidt S, Castiglione K, Kourist R. Overcoming the Incompatibility Challenge in Chemoenzymatic and Multi-Catalytic Cascade Reactions. Chemistry 2017; 24:1755-1768. [PMID: 28877401 DOI: 10.1002/chem.201703353] [Citation(s) in RCA: 107] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Indexed: 01/01/2023]
Abstract
Multi-catalytic cascade reactions bear a great potential to minimize downstream and purification steps, leading to a drastic reduction of the produced waste. In many examples, the compatibility of chemo- and biocatalytic steps could be easily achieved. Problems associated with the incompatibility of the catalysts and their reactions, however, are very frequent. Cascade-like reactions can hardly occur in this way. One possible solution to combine, in principle, incompatible chemo- and biocatalytic reactions is the defined control of the microenvironment by compartmentalization or scaffolding. Current methods for the control of the microenvironment of biocatalysts go far beyond classical enzyme immobilization and are thus believed to be very promising tools to overcome incompatibility issues and to facilitate the synthetic application of cascade reactions. In this Minireview, we will summarize recent synthetic examples of (chemo)enzymatic cascade reactions and outline promising methods for their spatial control either by using bio-derived or synthetic systems.
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Affiliation(s)
- Sandy Schmidt
- Institute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria
| | - Kathrin Castiglione
- Institute of Biochemical Engineering, Technical University of Munich, Boltzmannstr. 15, 85748, Garching, Germany
| | - Robert Kourist
- Institute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, 8010, Graz, Austria
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22
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Fukuda Y, Mizohata E, Inoue T. New molecular packing in a crystal of pseudoazurin from Alcaligenes faecalis: a double-helical arrangement of blue copper. Acta Crystallogr F Struct Biol Commun 2017; 73:159-166. [PMID: 28291752 PMCID: PMC5349310 DOI: 10.1107/s2053230x17002631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2017] [Accepted: 02/15/2017] [Indexed: 11/10/2022] Open
Abstract
Pseudoazurin from the denitrifying bacterium Alcaligenes faecalis (AfPAz) is a blue copper protein and functions as an electron donor to copper-containing nitrite reductase (CuNIR). Conventionally, AfPAz has been crystallized using highly concentrated ammonium sulfate as a precipitant. Here, a needle-like crystal of AfPAz grown in a solution containing a macromolecular precipitant, polyethylene glycol 8000 (PEG 8000), is reported. The crystal belonged to space group P61, with unit-cell parameters a = b = 68.7, c = 94.2 Å. The structure has been determined and refined at 2.6 Å resolution. The asymmetric unit contained two AfPAz molecules contacting each other on negatively charged surfaces. The molecular packing of the crystal showed a right-handed double-helical arrangement of AfPAz molecules and hence of blue copper sites. This structure provides insight into the excluded-volume effect of PEG and the manner of assembly of AfPAz.
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Affiliation(s)
- Yohta Fukuda
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Eiichi Mizohata
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Tsuyoshi Inoue
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan
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23
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Possato B, Deflon VM, Naal Z, Formiga ALB, Nikolaou S. An extended π-system and enhanced electronic delocalization on symmetric [Ru3O(CH3COO)6(L)3]n complexes combined with azanaphthalene ligands. Dalton Trans 2017; 46:7926-7938. [DOI: 10.1039/c7dt01152k] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
The electronic density of the metallic core relies on the basicity of the ligands through σ-donation, while part of this electronic density is delocalized to the periphery through π-interactions.
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Affiliation(s)
- Bruna Possato
- Departamento de Química – Faculdade de Filosofia
- Ciências e Letras de Ribeirão Preto - Universidade de São Paulo – Av. Bandeirantes
- Ribeirão Preto
- Brazil
| | - Victor M. Deflon
- Departamento de Química e Física Molecular - Instituto de Química de São Carlos - Universidade de São Paulo - Av. Trabalhador São Carlense
- São Carlos
- Brazil
| | - Zeki Naal
- Faculdade de Ciências Farmacêuticas de Ribeirão Preto - Universidade de São Paulo – Av. do Café s/no
- Ribeirão Preto
- Brazil
| | | | - Sofia Nikolaou
- Departamento de Química – Faculdade de Filosofia
- Ciências e Letras de Ribeirão Preto - Universidade de São Paulo – Av. Bandeirantes
- Ribeirão Preto
- Brazil
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24
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Oohora K, Mashima T, Ohkubo K, Fukuzumi S, Hayashi T. Energy migration within hexameric hemoprotein reconstituted with Zn porphyrinoid molecules. Chem Commun (Camb) 2016; 51:11138-40. [PMID: 26073549 DOI: 10.1039/c5cc02680f] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photosensitizers, Zn protoporphyrin IX and Zn chlorin e6, are completely inserted into each heme pocket of a hexameric apohemoprotein. The fluorescence quenching efficiencies upon addition of methyl viologen are 2.3 and 2.6 fold-higher than those of the partially photosensitizer-inserted proteins, respectively, indicating that the energy migration occurs within the proteins.
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Affiliation(s)
- Koji Oohora
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita 565-0871, Japan.
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25
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Ohkubo K, Hasegawa T, Rein R, Solladié N, Fukuzumi S. Multiple photosynthetic reaction centres of porphyrinic polypeptide-Li(+)@C60 supramolecular complexes. Chem Commun (Camb) 2015; 51:17517-20. [PMID: 26497396 DOI: 10.1039/c5cc07203d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Multiple photosynthetic reaction centres have been successfully constructed using strong supramolecular complexes of free base porphyrin polypeptides with lithium ion-encapsulated C60 (Li(+)@C60) as compared with those of C60. Efficient energy migration and electron transfer occur in the supramolecular complexes.
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Affiliation(s)
- Kei Ohkubo
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan. and Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750, Korea
| | - Tetsuya Hasegawa
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan.
| | - Régis Rein
- CNRS, LCC (Laboratoire de Chimie de Coordination), 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France. and Université de Toulouse, UPS, INPT, F-31077 Toulouse Cedex 4, France
| | - Nathalie Solladié
- CNRS, LCC (Laboratoire de Chimie de Coordination), 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France. and Université de Toulouse, UPS, INPT, F-31077 Toulouse Cedex 4, France
| | - Shunichi Fukuzumi
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan. and Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750, Korea
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26
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Investigation of a novel trinuclear μ-oxo ruthenium complex as a potential nitric oxide releaser for biological purposes. Inorganica Chim Acta 2015. [DOI: 10.1016/j.ica.2015.01.038] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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27
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Tabe H, Shimoi T, Fujita K, Abe S, Ijiri H, Tsujimoto M, Kuchimaru T, Kizaka-Kondo S, Mori H, Kitagawa S, Ueno T. Design of a CO-releasing Extracellular Scaffold Using in Vivo Protein Crystals. CHEM LETT 2015. [DOI: 10.1246/cl.141035] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Hiroyasu Tabe
- Graduate School of Engineering, Kyoto University
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
| | - Takuya Shimoi
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Kenta Fujita
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Satoshi Abe
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Hiroshi Ijiri
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Masahiko Tsujimoto
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
| | - Takahiro Kuchimaru
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Shinae Kizaka-Kondo
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Hajime Mori
- Insect Biomedical Research Center, Kyoto Institute of Technology
| | - Susumu Kitagawa
- Graduate School of Engineering, Kyoto University
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
| | - Takafumi Ueno
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
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28
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Abe S, Tokura Y, Pal R, Komura N, Imamura A, Matsumoto K, Ijiri H, Sanghamitra NJM, Tabe H, Ando H, Kiso M, Mori H, Kitagawa S, Ueno T. Surface Functionalization of Protein Crystals with Carbohydrate Using Site-selective Bioconjugation. CHEM LETT 2015. [DOI: 10.1246/cl.140865] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Satoshi Abe
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | - Yu Tokura
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University
| | - Rita Pal
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
- Department of Applied Bioorganic Chemistry, Gifu University
| | - Naoko Komura
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
- Department of Applied Bioorganic Chemistry, Gifu University
| | | | | | - Hiroshi Ijiri
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
| | | | - Hiroyasu Tabe
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University
| | - Hiromune Ando
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
- Department of Applied Bioorganic Chemistry, Gifu University
| | - Makoto Kiso
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
- Department of Applied Bioorganic Chemistry, Gifu University
| | - Hajime Mori
- Insect Biomedical Research Center, Kyoto Institute of Technology
| | - Susumu Kitagawa
- Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University
| | - Takafumi Ueno
- Department of Biomolecular Engineering, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
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29
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Abstract
Protein crystals have been functionalized for applications in preparation of inorganic materials, asymmetric catalysis and accumulation of functional compounds.
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Affiliation(s)
- Satoshi Abe
- Department of Biomolecular Engineering
- Graduate School of Bioscience and Biotechnology
- Tokyo Institute of Technology
- Midori-ku
- Japan
| | - Takafumi Ueno
- Department of Biomolecular Engineering
- Graduate School of Bioscience and Biotechnology
- Tokyo Institute of Technology
- Midori-ku
- Japan
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30
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Biswal D, Pramanik NR, Chakrabarti S, Drew MGB, Mitra P, Acharya K, Biswas S, Mondal TK. Supramolecular frameworks of binuclear dioxomolybdenum(vi) complexes with ONS donor ligands using 4,4′-azopyridine as a pillar: crystal structure, DFT calculations and biological study. NEW J CHEM 2015. [DOI: 10.1039/c5nj01899d] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
4,4′-Azpy is used as linker forming pillared dioxoMo(vi) complexes first time, biological activities are reported.
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Affiliation(s)
- Debanjana Biswal
- Department of Chemistry
- University College of Science
- Kolkata-700009
- India
| | | | | | | | - Payel Mitra
- Molecular and Applied Mycology and Plant Pathology Laboratory
- Department of Botany
- University of Calcutta
- Kolkata 700019
- India
| | - Krishnendu Acharya
- Molecular and Applied Mycology and Plant Pathology Laboratory
- Department of Botany
- University of Calcutta
- Kolkata 700019
- India
| | - Sujan Biswas
- Department of Chemistry (Inorganic section)
- Jadavpur University
- Kolkata 700032
- India
| | - Tapan Kumar Mondal
- Department of Chemistry (Inorganic section)
- Jadavpur University
- Kolkata 700032
- India
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31
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Tabe H, Fujita K, Abe S, Tsujimoto M, Kuchimaru T, Kizaka-Kondoh S, Takano M, Kitagawa S, Ueno T. Preparation of a cross-linked porous protein crystal containing Ru carbonyl complexes as a CO-releasing extracellular scaffold. Inorg Chem 2014; 54:215-20. [PMID: 25494847 DOI: 10.1021/ic502159x] [Citation(s) in RCA: 63] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Protein crystals generally are stable solid protein assemblies. Certain protein crystals are suitable for use as nanovessels for immobilizing metal complexes. Here we report the preparation of ruthenium carbonyl-incorporated cross-linked hen egg white lysozyme crystals (Ru·CL-HEWL). Ru·CL-HEWL retains a Ru carbonyl moiety that can release CO, although a composite of Ru carbonyl-HEWL dissolved in buffer solution (Ru·HEWL) does not release CO. We found that treatment of cells with Ru·CL-HEWL significantly increased nuclear factor kappa B (NF-κB) activity as a cellular response to CO. These results demonstrate that Ru·CL-HEWL has potential for use as an artificial extracellular scaffold suitable for transport and release of a gas molecule.
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Affiliation(s)
- Hiroyasu Tabe
- Graduate School of Engineering, Kyoto University, Katsura , Nishikyo-ku, Kyoto 615-8510, Japan
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32
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Tabe H, Abe S, Hikage T, Kitagawa S, Ueno T. Porous Protein Crystals as Catalytic Vessels for Organometallic Complexes. Chem Asian J 2014; 9:1373-8. [DOI: 10.1002/asia.201301347] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2013] [Revised: 12/26/2013] [Indexed: 01/19/2023]
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33
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Chakraborty S, Reed J, Ross M, Nilges MJ, Petrik ID, Ghosh S, Hammes-Schiffer S, Sage JT, Zhang Y, Schulz CE, Lu Y. Spectroscopic and Computational Study of a Nonheme Iron Nitrosyl Center in a Biosynthetic Model of Nitric Oxide Reductase. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201308431] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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34
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Chakraborty S, Reed J, Ross M, Nilges MJ, Petrik ID, Ghosh S, Hammes-Schiffer S, Sage JT, Zhang Y, Schulz CE, Lu Y. Spectroscopic and computational study of a nonheme iron nitrosyl center in a biosynthetic model of nitric oxide reductase. Angew Chem Int Ed Engl 2014; 53:2417-21. [PMID: 24481708 DOI: 10.1002/anie.201308431] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2013] [Revised: 11/27/2013] [Indexed: 11/07/2022]
Abstract
A major barrier to understanding the mechanism of nitric oxide reductases (NORs) is the lack of a selective probe of NO binding to the nonheme FeB center. By replacing the heme in a biosynthetic model of NORs, which structurally and functionally mimics NORs, with isostructural ZnPP, the electronic structure and functional properties of the FeB nitrosyl complex was probed. This approach allowed observation of the first S=3/2 nonheme {FeNO}(7) complex in a protein-based model system of NOR. Detailed spectroscopic and computational studies show that the electronic state of the {FeNO}(7) complex is best described as a high spin ferrous iron (S=2) antiferromagnetically coupled to an NO radical (S=1/2) [Fe(2+)-NO(.)]. The radical nature of the FeB -bound NO would facilitate N-N bond formation by radical coupling with the heme-bound NO. This finding, therefore, supports the proposed trans mechanism of NO reduction by NORs.
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Affiliation(s)
- Saumen Chakraborty
- Department of Chemistry and Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL (USA)
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35
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Liu D, Wang HF, Abrahams BF, Lang JP. Single-crystal-to-single-crystal transformation of a two-dimensional coordination polymer through highly selective [2+2] photodimerization of a conjugated dialkene. Chem Commun (Camb) 2014; 50:3173-5. [DOI: 10.1039/c3cc49749f] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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36
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Ding Y, Shi L, Wei H. Protein-directed approaches to functional nanomaterials: a case study of lysozyme. J Mater Chem B 2014; 2:8268-8291. [DOI: 10.1039/c4tb01235f] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Using lysozyme as a model, protein-directed approaches to functional nanomaterials were reviewed, making rational materials design possible in the future.
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Affiliation(s)
- Yubin Ding
- Department of Biomedical Engineering
- Aerosol Bioeffects and Health Research Center
- College of Engineering and Applied Sciences
- Nanjing National Laboratory of Microstructures
- Nanjing University
| | - Leilei Shi
- Department of Biomedical Engineering
- Aerosol Bioeffects and Health Research Center
- College of Engineering and Applied Sciences
- Nanjing National Laboratory of Microstructures
- Nanjing University
| | - Hui Wei
- Department of Biomedical Engineering
- Aerosol Bioeffects and Health Research Center
- College of Engineering and Applied Sciences
- Nanjing National Laboratory of Microstructures
- Nanjing University
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37
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Frath D, Yarnell JE, Ulrich G, Castellano FN, Ziessel R. Ultrafast Photoinduced Electron Transfer in Viologen‐Linked BODIPY Dyes. Chemphyschem 2013; 14:3348-54. [DOI: 10.1002/cphc.201300547] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2013] [Revised: 06/26/2013] [Indexed: 11/10/2022]
Affiliation(s)
- Denis Frath
- Laboratoire de Chimie Organique et Spectroscopies Avancées, ICPEES, UMR 7515 au CNRS, Ecole Européene de Chimie, Polymère, et Matériaux, 25 rue Becquerel, 67087 Strasbourg Cedex (France), Fax: (+33) 3‐68‐85‐26‐89 http://icpees.unistra.fr/lcosa/
| | - James E. Yarnell
- Department of Chemistry and Center for Photochemical Sciences, Bowling Green State University, Bowling Green, Ohio, 43403 (USA)
| | - Gilles Ulrich
- Laboratoire de Chimie Organique et Spectroscopies Avancées, ICPEES, UMR 7515 au CNRS, Ecole Européene de Chimie, Polymère, et Matériaux, 25 rue Becquerel, 67087 Strasbourg Cedex (France), Fax: (+33) 3‐68‐85‐26‐89 http://icpees.unistra.fr/lcosa/
| | - Felix N. Castellano
- Department of Chemistry and Center for Photochemical Sciences, Bowling Green State University, Bowling Green, Ohio, 43403 (USA)
| | - Raymond Ziessel
- Laboratoire de Chimie Organique et Spectroscopies Avancées, ICPEES, UMR 7515 au CNRS, Ecole Européene de Chimie, Polymère, et Matériaux, 25 rue Becquerel, 67087 Strasbourg Cedex (France), Fax: (+33) 3‐68‐85‐26‐89 http://icpees.unistra.fr/lcosa/
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38
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Abstract
Porous protein crystals have the potential to provide new porous materials due to their unique chemical environments composed of amino acid residues periodically exposed at the surface of the solvent channels in the crystal lattice. This enables accumulation of external compounds in special arrangements by metal coordination interactions or by chemical modifications. This article presents a review of advances in the recently established field of porous protein crystals.
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Affiliation(s)
- Takafumi Ueno
- Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, Nagatsuta-cho 4259-B55, Midori-ku, Yokohama 226-8501, Japan.
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39
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Artificial Metalloenzymes Constructed From Hierarchically-Assembled Proteins. Chem Asian J 2013; 8:1646-60. [DOI: 10.1002/asia.201300347] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2013] [Indexed: 01/20/2023]
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40
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Sanghamitra NJM, Ueno T. Expanding coordination chemistry from protein to protein assembly. Chem Commun (Camb) 2013; 49:4114-26. [DOI: 10.1039/c2cc36935d] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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41
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Abe S, Tsujimoto M, Yoneda K, Ohba M, Hikage T, Takano M, Kitagawa S, Ueno T. Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2012; 8:1314-1319. [PMID: 22383363 DOI: 10.1002/smll.201101866] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2011] [Revised: 11/23/2011] [Indexed: 05/31/2023]
Abstract
Magnetic bimetallic CoPt nanoparticles are synthesized in the solvent channels of hen egg white lysozyme crystals by the reduction of Co(2+) and Pt(2+) ions pre-organized on the interior surface of the solvent channels. By using different lysozyme crystal systems, the magnetic properties of CoPt nanoparticles can be controlled.
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Affiliation(s)
- Satoshi Abe
- Institute for Integrated Cell-Material Sciences, (WPI-iCeMS), Kyoto University, Yoshida, Sakyo-ku, Kyoto, Japan
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42
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Zeng Y, Fu Z, Chen H, Liu C, Liao S, Dai J. Photo- and thermally induced coloration of a crystalline MOF accompanying electron transfer and long-lived charge separation in a stable host–guest system. Chem Commun (Camb) 2012; 48:8114-6. [DOI: 10.1039/c2cc33823h] [Citation(s) in RCA: 106] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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