1
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Esteban A, Ortega P, Sanz F, Jambrina PG, Díez D. Crystallization-induced diastereomer transformation assists the diastereoselective synthesis of 4-nitroisoxazolidine scaffolds. Org Biomol Chem 2024; 22:6582-6592. [PMID: 39083363 DOI: 10.1039/d4ob01014k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/02/2024]
Abstract
This communication describes a solution to the vexing problem of synthesis of 4-nitroisoxazolidine rings from cyclic nitrones and β-nitrostyrenes. The trans-endo adduct 2 is quantitatively synthesised from E-β-nitrostyrene under mild conditions avoiding purification, while the trans-exo adduct 4 is obtained at higher temperatures. Furthermore, a Crystallization-Induced Diastereomer Transformation (CIDT) process was used to epimerise the NO2 bond from 2 to the cis-exo adduct 3 with total conversion assisted by the para-halogen substitution of the aromatic ring without any additives. By combining these approaches, we can establish a simple synthetic methodology that allows the diastereoselective synthesis of three diastereoisomers, overcoming the previous problems described in the literature.
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Affiliation(s)
- Alberto Esteban
- Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad de Salamanca. Plaza de los Caídos 1-5, 37008 Salamanca, Spain.
| | - Pablo Ortega
- Departamento de Química Física, Facultad de Ciencias Químicas, Universidad de Salamanca. Plaza de los Caídos 1-5, 37008 Salamanca, Spain
| | - Francisca Sanz
- Servicio de Difracción de Rayos X, Plataforma Nucleus, Universidad de Salamanca, Plaza de los Caídos 1-5, 37008 Salamanca, Spain
| | - Pablo G Jambrina
- Departamento de Química Física, Facultad de Ciencias Químicas, Universidad de Salamanca. Plaza de los Caídos 1-5, 37008 Salamanca, Spain
| | - David Díez
- Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad de Salamanca. Plaza de los Caídos 1-5, 37008 Salamanca, Spain.
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2
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Zhang J, Wang K, Zhu C. Deracemization of Atropisomeric Biaryls Enabled by Copper Catalysis. JACS AU 2024; 4:502-511. [PMID: 38425940 PMCID: PMC10900502 DOI: 10.1021/jacsau.3c00623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 01/03/2024] [Accepted: 01/03/2024] [Indexed: 03/02/2024]
Abstract
Atropisomeric biaryls have found crucial applications in versatile chiral catalysts as well as in ligands for transition metals. Herein, we have developed an efficient crystallization-induced deracemization (CID) method to access chiral biaryls from their racemates with a chiral ammonium salt under copper catalysis including BINOL, NOBIN, and BINAM derivatives. After being significantly accelerated by its bidentate diamine ligand, the copper catalyst exhibits high efficiency and selectivity in racemizing biaryl skeletons, and the cocrystal complex would be enantioselectively formed together with chiral ammonium salt, which on acid-quenching would directly deliver chiral biaryl without further chromatographic purification. This CID process is easily scalable, and the chiral ammonium salt was nicely recoverable. Ligand effect studies showed that bulky alkyl substitution was an indispensable element to ensure efficient racemization, which probably proceeds via a radical-cation intermediate and further allows axial rotation by forming a delocalized radical.
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Affiliation(s)
| | | | - Can Zhu
- Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai 200438, China
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3
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Yu Q, Zhou Y, Gao X, Pan S, Lin F, Li W. Gram-Scale Synthesis of the C14–C23 Fragment of Eribulin. Org Process Res Dev 2023. [DOI: 10.1021/acs.oprd.2c00370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Affiliation(s)
- Qiuhan Yu
- Department of Medicinal Chemistry School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, P. R. of China
| | - Yueer Zhou
- Department of Medicinal Chemistry School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, P. R. of China
| | - Xinai Gao
- Department of Medicinal Chemistry School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, P. R. of China
| | - Shuheng Pan
- Department of Medicinal Chemistry School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, P. R. of China
| | - Feng Lin
- WuXi AppTec, 288 Fute Zhong Road, Waigaoqiao Free Trade Zone, Shanghai 200131, P. R. of China
| | - Wei Li
- Department of Medicinal Chemistry School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, P. R. of China
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4
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Nakamura T, Ishikawa H, Ban K, Yoshida Y, Mino T, Kasashima Y, Sakamoto M. Attrition-Enhanced Asymmetric Transformation of Axially Chiral Nicotinamides by Dynamic Chiral Salt Formation. Chempluschem 2022; 87:e202100504. [PMID: 35023638 DOI: 10.1002/cplu.202100504] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 12/28/2021] [Indexed: 12/30/2022]
Abstract
Atroposelective resolution for axially chiral nicotinamides was achieved by dynamic chiral salt formation with L-DBTA using six types of nicotinamides that could not be optically resolved by the preferential crystallization method. Kinetic studies of their racemization indicated that the chiral conformation was retained for a significant period of time. Two methods of crystallization-induced asymmetric transformation were examined by dynamic diastereomeric salt formation: solvent evaporation from a supersaturated solution, and attrition-enhanced asymmetric transformation. The attrition method was more effective for asymmetric amplification of diastereomeric salts of axially chiral materials. Attrition of equimolar amount of the nicotinamide salts with L-DBTA converged to one diastereomer salts, and the corresponding enantiomers in 87-99 % ee were obtained after the chiral acid was removed. Changing the ratio of two of the nicotinamides with L-DBTA to 1 : 2 inverted the axial chirality.
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Affiliation(s)
- Takumi Nakamura
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
| | - Hiroki Ishikawa
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
| | - Kazuma Ban
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
| | - Yasushi Yoshida
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
| | - Takashi Mino
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
| | - Yoshio Kasashima
- Education Center, Faculty of Creative Engineering, Chiba Institute of Technology Shibazono, Narashino, Chiba, 275-0023, Japan
| | - Masami Sakamoto
- Department of Applied Chemistry and Biotechnology Graduate School of Engineering, Chiba University, Yayoi-cho, Inage-ku, Chiba, Chiba, 263-8522, Japan
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5
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Kolarovič A, Jakubec P. State of the Art in Crystallization‐Induced Diastereomer Transformations. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202100473] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Andrej Kolarovič
- Department of Chemistry Faculty of Education Trnava University Priemyselná 4 918 43 Trnava Slovakia
| | - Pavol Jakubec
- Institute of Organic Chemistry Catalysis and Petrochemistry Slovak University of Technology Radlinského 9 812 37 Bratislava Slovakia
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6
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7
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Yan Z, Zhao C, Gong J, Yang Z. Asymmetric Total Synthesis of (−)-Guignardones A and B. Org Lett 2020; 22:1644-1647. [DOI: 10.1021/acs.orglett.0c00241] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Zhiming Yan
- State Key Laboratory of Chemical Oncogenomics, Key Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China
| | - Chunbo Zhao
- State Key Laboratory of Chemical Oncogenomics, Key Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China
| | - Jianxian Gong
- State Key Laboratory of Chemical Oncogenomics, Key Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China
| | - Zhen Yang
- State Key Laboratory of Chemical Oncogenomics, Key Laboratory of Chemical Genomics, Peking University Shenzhen Graduate School, Shenzhen 518055, China
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education and Beijing National Laboratory for Molecular Science (BNLMS), and Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China
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8
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Sivák I, Toběrný M, Kyselicová A, Caletková O, Berkeš D, Jakubec P, Kolarovič A. Stereoselective Synthesis of Functionalized α-Amino Acids Isolated by Filtration. J Org Chem 2018; 83:15541-15548. [DOI: 10.1021/acs.joc.8b02647] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Ivan Sivák
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Michal Toběrný
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Andrea Kyselicová
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Ol’ga Caletková
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Dušan Berkeš
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Pavol Jakubec
- Institute of Organic Chemistry, Catalysis and Petrochemistry, Slovak University of Technology, Radlinského 9, Bratislava 812 37, Slovakia
| | - Andrej Kolarovič
- Department of Chemistry, Faculty of Education, Trnava University, Priemyselná 4, Trnava 918 43, Slovakia
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9
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Yamashita Y, Maki D, Sakurai S, Fuse T, Matsumoto S, Akazome M. Preparation of chiral 3-oxocycloalkanecarbonitrile and its derivatives by crystallization-induced diastereomer transformation of ketals with chiral 1,2-diphenylethane-1,2-diol. RSC Adv 2018; 8:32601-32609. [PMID: 35547706 PMCID: PMC9086373 DOI: 10.1039/c8ra06611f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 09/10/2018] [Indexed: 11/28/2022] Open
Abstract
Chiral 3-oxocycloalkanecarbonitriles were prepared by fractional crystallization and crystallization-induced diastereomer transformation (CIDT) of diastereomeric ketals with (1R,2R)-1,2-diphenylethane-1,2-diol. Investigation of the crystal structures by X-ray diffraction analysis revealed that the difference in hydrogen bonds caused the discrepancy of the solubilities between (R) and (S) diastereomers. Furthermore, CIDT to afford the (R)-diastereomer in good yield (95% yield) and with high diastereoselectivity (97% de) was accomplished, which is the first example of CIDT of neutral compounds via formation of the diastereomeric ketal with (1R,2R)-1,2-diphenylethane-1,2-diol. Chiral 3-oxocyclopentanecarbonitrile was prepared in good yield and with high diastereoselectivity by crystallization-induced diastereomer transformation of the corresponding diastereomeric ketal.![]()
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Affiliation(s)
- Yohei Yamashita
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan .,Process Chemistry Labs. Pharmaceutical Technology, Astellas Pharma Inc. 160-2, Akahama Takahagi-shi Ibaraki 318-0001 Japan
| | - Daisuke Maki
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan
| | - Shiho Sakurai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan
| | - Takumi Fuse
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan
| | - Shoji Matsumoto
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan
| | - Motohiro Akazome
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan .,Molecular Chirality Research Center, Chiba University 1-33 Yayoicho, Inageku Chiba 263-8522 Japan
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10
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Choi HW, Fang FG, Fang H, Kim DS, Mathieu SR, Yu RT. Prins Reaction of Homoallenyl Alcohols: Access to Substituted Pyrans in the Halichondrin Series. Org Lett 2017; 19:6092-6095. [DOI: 10.1021/acs.orglett.7b02934] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Hyeong-wook Choi
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
| | - Francis G. Fang
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
| | - Hui Fang
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
| | - Dae-Shik Kim
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
| | - Steven R. Mathieu
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
| | - Robert T. Yu
- Integrated Chemistry Engine, Eisai AiM Institute, 4 Corporate Drive, Andover, Massachusetts 01810, United States
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11
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Maetani M, Zoller J, Melillo B, Verho O, Kato N, Pu J, Comer E, Schreiber SL. Synthesis of a Bicyclic Azetidine with In Vivo Antimalarial Activity Enabled by Stereospecific, Directed C(sp 3)-H Arylation. J Am Chem Soc 2017; 139:11300-11306. [PMID: 28732448 PMCID: PMC5561537 DOI: 10.1021/jacs.7b06994] [Citation(s) in RCA: 78] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
![]()
The development of new antimalarial
therapeutics is necessary to address the increasing resistance to
current drugs. Bicyclic azetidines targeting Plasmodium falciparum phenylalanyl-tRNA synthetase comprise one promising new class of
antimalarials, especially due to their activities against three stages
of the parasite’s life cycle, but a lengthy synthetic route
to these compounds may affect the feasibility of delivering new therapeutic
agents within the cost constraints of antimalarial drugs. Here, we
report an efficient synthesis of antimalarial compound BRD3914 (EC50 = 15 nM) that hinges on a Pd-catalyzed, directed C(sp3)–H arylation of azetidines at the C3 position. This
newly developed protocol exhibits a broad substrate scope and provides
access to valuable, stereochemically defined building blocks. BRD3914
was evaluated in P. falciparum-infected mice,
providing a cure after four oral doses.
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Affiliation(s)
- Micah Maetani
- Department of Chemistry and Chemical Biology, Harvard University , Cambridge, Massachusetts 02138, United States.,Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Jochen Zoller
- Department of Chemistry and Chemical Biology, Harvard University , Cambridge, Massachusetts 02138, United States.,Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Bruno Melillo
- Department of Chemistry and Chemical Biology, Harvard University , Cambridge, Massachusetts 02138, United States.,Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Oscar Verho
- Department of Chemistry and Chemical Biology, Harvard University , Cambridge, Massachusetts 02138, United States.,Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Nobutaka Kato
- Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Jun Pu
- Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Eamon Comer
- Broad Institute , Cambridge, Massachusetts 02142, United States
| | - Stuart L Schreiber
- Department of Chemistry and Chemical Biology, Harvard University , Cambridge, Massachusetts 02138, United States.,Broad Institute , Cambridge, Massachusetts 02142, United States.,Howard Hughes Medical Institute , Cambridge, Massachussetts 02138, United States
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12
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Meng TZ, Shi XX, Qu HY, Zhang Y, Huang ZS, Fan QQ. Highly diastereoselective crystallization-induced asymmetric transformation of 1,3-disubstituted-tetrahydro-β-carbolines in water. RSC Adv 2017. [DOI: 10.1039/c7ra08811f] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A green and highly stereoselective method for the synthesis of cis or trans-1,3-disubstituted-tetrahydro-β-carbolines has been developed using water as the solvent.
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Affiliation(s)
- Tian-Zhuo Meng
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Xiao-Xin Shi
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Hui-Ya Qu
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Yi Zhang
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Zhong-Shou Huang
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Qi-Qi Fan
- Department of Pharmaceutical Engineering
- School of Pharmacy
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
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13
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Sivák I, Berkeš D, Kožíšek J, Kolarovič A. Chromatography-free stereoselective synthesis of ( R )-3-benzylpiperidine. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.01.086] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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14
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Story of Eribulin Mesylate: Development of the Longest Drug Synthesis. TOPICS IN HETEROCYCLIC CHEMISTRY 2016. [DOI: 10.1007/7081_2016_201] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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