Carbon dioxide fixation and sulfate sequestration by a supramolecular trigonal bipyramid

Enantiopure trigonal bipyramidal coordination cages templated by in situ self-organized D2h-symmetric anions

The control of a molecule's geometry, chirality, and physical properties has long been a challenging pursuit. Our study introduces a dependable method for assembling D3-symmetric trigonal bipyramidal coordination cages. Specifically, D2h-symmetric anions, like oxalate and chloranilic anions, self-organize around a metal ion to form chiral-at-metal anionic complexes, which template the formation of D3-symmetric trigonal bipyramidal coordination cages. The chirality of the trigonal bipyramid is determined by the point chirality of chiral amines used in forming the ligands. Additionally, these cages exhibit chiral selectivity for the included chiral-at-metal anionic template. Our method is broadly applicable to various ligand systems, enabling the construction of larger cages when larger D2h-symmetric anions, like chloranilic anions, are employed. Furthermore, we successfully produce enantiopure trigonal bipyramidal cages with anthracene-containing backbones using this approach, which would be otherwise infeasible. These cages exhibit circularly polarized luminescence, which is modulable through the reversible photo-oxygenation of the anthracenes.

Molecular Assemblies Offering Hydrogen-Bonding Cavities: Influence of Macrocyclic Cavity and Hydrogen Bonding on Dye Adsorption

This work presents a set of Hg macrocycles of amide-phosphine-based ligands offering H-bonding cavities of different dimensions. Such macrocycles are shown to selectively adsorb anionic dyes followed by neutral dyes as well as Prontosil, a biologically relevant antibiotic, within their cavities with the aid of H-bonding-assisted encapsulation. Kinetic experiments supported by spectroscopic and docking studies illustrate the importance of the cavity structure as well as H-bonds for the selective adsorption of dyes.

Adaptive coordination assemblies based on a flexible tetraazacyclododecane ligand for promoting carbon dioxide fixation

Coordination hosts based on flexible ligands have received increasing attention due to their inherent adaptive cavities that often show induced-fit guest binding and catalysis like enzymes. Herein, we report the controlled self-assembly of a series of homo/heterometallic coordination hosts (Me₄enPd)_2n(ML)_n [n = 2/3; M = Zn(ii)/Co(ii)/Ni(ii)/Cu(ii)/Pd(ii)/Ag(i); Me₄en: N,N,N′,N′-tetramethylethylenediamine] with different shapes (tube/cage) from a flexible tetraazacyclododecane-based pyridinyl ligand (L) and cis-blocking Me₄enPd(ii) units. While the Ag(i)-metalated ligand (AgL) gave rise to the formation of a (Me₄enPd)₄(ML)₂-type cage, all other M(ii) ions led to isostructural (Me₄enPd)₆(ML)₃-type tubular complexes. Structural transformations between cages and tubes could be realized through transmetalation of the ligand. The buffering effect on the ML panels endows the coordination tubes with remarkable acid–base resistance, which makes the (Me₄enPd)₆(ZnL)₃ host an effective catalyst for the CO₂ to CO₃²⁻ conversion. Control experiments suggested that the integration of multiple active Zn(ii) sites on the tubular host and the perfect geometry match between CO₃²⁻ and the cavity synergistically promoted such a conversion. Our results provide an important strategy for the design of adaptive coordination hosts to achieve efficient carbon fixation.

A series of coordination hosts were prepared and their applications in CO₂ fixation were studied.

Supramolecular catalysis: the role of H-bonding interactions in substrate orientation and activation

Hydrogen bonding plays significant roles in various biological processes during substrate orientation and binding and therefore assists in assorted organic transformations. However, replicating the intricate selection of hydrogen bonds, as observed in nature, in synthetic complexes has met with only limited success. Despite this fact, recent times have seen the emergence of several notable examples where hydrogen bonds have been introduced in synthetic complexes. A few such examples have also illustrated the substantial role played by the hydrogen bonds in influencing and often controlling the catalytic outcome. This perspective presents selected examples illustrating the significance of hydrogen bonds offered by the coordination and the organometallic complexes that aid in providing the desired orientation to a substrate adjacent to a catalytic metal center and remarkably assisting in the catalysis.

Cyclic monoterpenes trapped in a polyaromatic capsule: unusual selectivity, isomerization, and volatility suppression

Cyclic monoterpenes (CMTs) are intractable natural products with high volatility and strong odors so that there has been no molecular receptor capable of selectively and tightly trapping CMTs in both solution and the solid state. We herein report that a polyaromatic capsule acts as a functional nanoflask for CMTs with the following five features: (i) the capsule can selectively bind menthone from mixtures with other saturated CMTs in water. In contrast, (ii) treatment of the capsule with mixtures of menthone and π-conjugated CMTs gives rise to ternary host–guest complexes with high pair-selectivity. Notably, (iii) the encapsulated menthone displays unusual isomerization from a typical chair conformer to otherwise unstable conformers upon heating. (iv) The selective binding of volatilized CMTs is demonstrated by the capsule even in the solid state at atmospheric pressure. Furthermore, (v) the volatilities of CMTs are significantly suppressed at elevated temperatures by the capsule upon encapsulation in solution as well as in the solid state.

A polyaromatic capsule demonstrated its unique host functions toward cyclic monoterpenes, i.e., selective binding in water, pair-selective encapsulation, unusual isomerization, selective binding in the solid state, and remarkable volatility suppression.

A Cavity-Tailored Metal-Organic Cage Entraps Gases Selectively in Solution and the Amorphous Solid State

Here we report the subcomponent self-assembly of a truxene-faced Zn4 L4 tetrahedron, which is capable of binding the smallest hydrocarbons in solution. By deliberately incorporating inward-facing ethyl groups on the truxene faces, the resulting partially-filled cage cavity was tailored to encapsulate methane, ethane, and ethene via van der Waals interactions at atmospheric pressure in acetonitrile, and also in the amorphous solid state. Interestingly, gas capture showed divergent selectivities in solution and the amorphous solid state. The selective binding may prove useful in designing new processes for the purification of methane and ethane as feedstocks for chemical synthesis.

Functional Capsules via Subcomponent Self-Assembly

Coordination-driven self-assembly can produce large, symmetrical, hollow cages that are synthetically easy to access. The functions provided by these aesthetically attractive structures provide a driving force for their development, enabling practical applications. For instance, cages have provided new methods of molecular recognition, chirality sensing, separations, stabilization of reactive species, and catalysis. We have fruitfully employed subcomponent self-assembly to prepare metal-organic capsules from simple building blocks via the simultaneous formation of dynamic coordinative (N→metal) and covalent (N═C) bonds. Design strategies employ multidentate pyridyl-imine ligands to define either the edges or the faces of polyhedral structures. Octahedral metal ions, such as Fe^II, Co^II, Ni^II, Zn^II, and Cd^II, constitute the vertices. The generality of this technique has enabled the preparation of capsules with diverse three-dimensional structures. This Account highlights how fundamental investigations into the host-guest chemistry of capsules prepared through subcomponent self-assembly have led to the design of useful functions and new applications. We start by discussing simple host-guest systems involving a single capsule and continue to systems that include multiple capsules and guests, whose interactions give rise to complex functional behavior. Many of the capsules presented herein bind varied neutral guests, including aromatic or aliphatic molecules, biomolecules, and fullerenes. Binding selectivity is influenced by solvent effects, weak non-covalent interactions between hosts and guests, and the size, shape, flexibility, and degree of surface enclosure of the inner spaces of the capsules. Some hosts are able to adaptively rearrange structurally or express a different ratio of cage diastereomers to optimize the guest binding ability of the system. In other cases the bound guest can be either protected from degradation or catalytically transformed through encapsulation. Other capsules bind anions, most often in organic solvents and occasionally in water. Complexation is usually driven by a combination of electrostatic interactions, hydrogen bonding, and coordination to additional metal centers. Anion binding can also induce cage diastereomeric reconfiguration in a similar manner to some neutral guests, illustrating the general ability of subcomponent self-assembled capsules to respond to stimuli due to their dynamic nature. Capsules have been developed as supramolecular extractants for the selective removal of anions from water and as channels for transporting anions through planar lipid bilayers and into vesicles. Different capsules may work together, allowing for functions more complex than those achievable within single host-guest systems. Incorporation of stimuli-responsive capsules into multicage systems allows individual capsules within the network to be addressed and may allow signals to be passed between network members. We first present strategies to achieve selective guest binding and controlled guest release using mixtures of capsules with varied affinities for guests and different stabilities toward external stimuli. We then discuss strategies to separate capsules with encapsulated cargos via selective phase transfer, where the solvent affinities of capsules change as a result of anion exchange or post-assembly modification. The knowledge gained from these multicage systems may lead to the design of synthetic systems that can perform complex tasks in biomimetic fashion, paving the way for new supramolecular technologies to address practical problems.

Highlights from the 53rd EUCHEM conference on stereochemistry, Bürgenstock, Switzerland, May 2018

When we first heard of the Bürgenstock conference it was described as a guarded meeting in a remote location, undisturbed by modern diversions, with mysterious customs and a secret handshake. All of these rumors turned out to be completely true. We arrived at an undisclosed location and three young men, who knew our names upon sight, greeted us and gave us an agenda in which we discovered the identity of the speakers, moderators and other participants. We then had a few moments to bask in their glory before being treated to a delicious dose of chemistry. During the banquet, before the first lecture, this year's president, Prof. Ilan Marek, gave the opening address from a balcony reserved only for these meetings, rumors hold that it stands vacant all year in anticipation. He mentioned several of the traditions of the meeting, which we are not allowed to share of course, and described the joy of putting together this year's exciting program with the help of an exceptional organizing committee that included Prof. Cristina Nevado, Prof. Christian Bochet, Dr Fabrice Gallou and Dr Alain De Mesmaeker. He also introduced this year's guest of honor, Prof. Yitzhak Apeloig, and wished the best luck to the current Vice President and future President, Prof. Véronique Gouverneur, not only for preparing the 54th Bürgenstock Conference, but also with her duty this year, maintaining the good weather for the whole week. Although the official title of the conference is the EUCHEM conference on stereochemistry, the topics covered span a broad range of cutting edge chemical transformations and insights, which can appeal to anyone working in chemistry and its interfaces with other disciplines. We will briefly describe each of the talks following one of our favorite citable quotes from these inspiring speakers.

Sulfate Donor Based Dinuclear Heteroleptic Triple-Stranded Helicates from Sulfite and Ditopic Nitrogen Donor Ligands and Their Transformation to Dinuclear Homoleptic Double-Stranded Mesocates

Sulfate donor based supramolecular coordination complexes [{ fac-Re(CO)₃}(μ-SO₄)(L ⁿ)₂{ fac-Re(CO)₃}] (1-3) were obtained using ditopic N donors (L ⁿ; n = 1-3), NaHSO₃, and Re₂(CO)₁₀ in a one-pot, multicomponent, coordination-driven self-assembly approach, in which SO₃^2- becomes oxidized to SO₄^2- during the reaction and acts as a building framework. Complexes 1-3 were characterized using IR, ESI-TOF-MS, and ¹H NMR spectroscopy. The structures of complexes 1-3 were confirmed using single-crystal X-ray diffraction analysis. The transformation of the dinuclear heteroleptic triple-stranded helicate to the dinuclear homoleptic double-stranded mesocate [{Re(CO)₃Cl}₂(L ⁿ)₂] (L ⁿ = L¹, L², L³; 4a-6a) was achieved by the addition of BaCl₂. The direct treatment of Re(CO)₅X (X = Cl, Br) with L¹/L²/L³ yielded the dinuclear homoleptic double-stranded helicates [{Re(CO)₃X}₂ (L ⁿ)₂] (4b-6b and 7-9).

Inflating face-capped Pd6L8 coordination cages

Tritopic metalloligands were used to form two Pd6L8-type coordination cages. With molecular weights of more than 15 kDa and PdPd distances of up to 4.2 nm, these complexes are among the largest palladium cages described to date.

Temperature-Responsive Fluorescent Organoplatinum(II) Metallacycles

The synthesis, characterization, and temperature-responsive properties of two fluorescent organoplatinum(II) metallacycles are reported. Metallacycles M1 and M2 were prepared via the coordination-driven self-assembly of a 120° triarylamine ligand L1 and a 120° diplatinum(II) acceptor Pt-1 or 180° diplatinum(II) acceptor Pt-2, respectively. M1 and M2 are hexagonal metallacycles, comprising of three or six freely rotating anthracene pendants on their periphery, respectively. In response to the temperature variation between -20 and 60 °C, the ligand displays irregular emission changes, whereas both metallacycles show reversible absorption and emission spectral changes in THF. The changes in their green emission intensity also exhibit a linear correlation with the temperature variation, with an average sensitivity of -0.67% and -0.77% per °C for M1 and M2, respectively. Furthermore, in coordinating solvents, such as DMF and CH3CN, M1 and M2 show different behaviors: in the lower temperature range, i.e., below 30 °C, their spectral changes are similar to those observed in THF; however, at a higher temperature the metallacycles were presumably destroyed by the solvents and displayed ratiometric fluorescent responses, including a cyan emission of the ligand L1.

Novel 1D coordination polymers built from acyclic cryptate containing bis(1H-1,2,4-triazole) ligands and featuring coordinated counteranions

Two new coordination polymers, namely, ZnL₂(BF₄)₂ (1) and CuL₂(NO₃)₂ (2) were constructed from a new flexible acyclic cryptate-bis(1H-1,2,4-triazole) ligand.

Guest Controlled Nonmonotonic Deep Cavity Cavitand Assembly State Switching

Octa-acid (OA) and tetra-endo-methyl octa-acid (TEMOA) are water-soluble, deep-cavity cavitands with nanometer-sized nonpolar pockets that readily bind complementary guests, such as n-alkanes. Experimentally, OA exhibits a progression of 1:1 to 2:2 to 2:1 host/guest complexes (X:Y where X is the number of hosts and Y is the number of guests) with increasing alkane chain length from methane to tetradecane. Differing from OA only by the addition of four methyl groups ringing the portal of the pocket, TEMOA exhibits a nonmonotonic progression of assembly states from 1:1 to 2:2 to 1:1 to 2:1 with increasing guest length. Here we present a systematic molecular simulation study to parse the molecular and thermodynamic determinants that distinguish the succession of assembly stoichiometries observed for these similar hosts. Potentials of mean force between hosts and guests, determined via umbrella sampling, are used to characterize association free energies. These free energies are subsequently used in a reaction network model to predict the equilibrium distributions of assemblies. Our models accurately reproduce the experimentally observed trends, showing that TEMOA's endo-methyl units constrict the opening of the binding pocket, limiting the conformations available to bound guests and disrupting the balance between monomeric complexes and dimeric capsules. The success of our simulations demonstrate their utility at interpreting the impact of even simple chemical modifications on supramolecular assembly and highlight their potential to aid bottom-up design.

Solid-State Gas Adsorption Studies with Discrete Palladium(II) [Pd2 (L)4 ]4+ Cages

The need for effective CO₂ capture systems remains high, and due to their tunability, metallosupramolecular architectures are an attractive option for gas sorption. While the use of extended metal organic frameworks for gas adsorption has been extensively explored, the exploitation of discrete metallocage architectures to bind gases remains in its infancy. Herein the solid state gas adsorption properties of a series of [Pd₂ (L)₄ ]⁴⁺ lantern shaped coordination cages (L = variants of 2,6-bis(pyridin-3-ylethynyl)pyridine), which had solvent accessible internal cavities suitable for gas binding, have been investigated. The cages showed little interaction with dinitrogen gas but were able to take up CO₂ . The best performing cage reversibly sorbed 1.4 mol CO₂ per mol cage at 298 K, and 2.3 mol CO₂ per mol cage at 258 K (1 bar). The enthalpy of binding was calculated to be 25-35 kJ mol^-1 , across the number of equivalents bound, while DFT calculations on the CO₂ binding in the cage gave ΔE for the cage-CO₂ interaction of 23-28 kJ mol^-1 , across the same range. DFT modelling suggested that the binding mode is a hydrogen bond between the carbonyl oxygen of CO₂ and the internally directed hydrogen atoms of the cage.

Self-assembly of metal-ion-responsive supramolecular coordination complexes and their photophysical properties

Herein, we describe the synthesis and characterization of two newly self-assembled supramolecular coordination complexes (SCCs) by using the cis-{Pt(PEt₃)₂}²⁺ center and two different kinds of pyridyl-derivatized ligands. The photophysical properties of the resulting SCCs in the presence of metal ions revealed that these dipyridyl-containing SCCs hold potential as metal-ion-responsive materials.

Immobilizing Tetraphenylethylene into Fused Metallacycles: Shape Effects on Fluorescence Emission

Herein, we describe the selective formation of a discrete fused metallarhomboid and a triangle by the careful control of the shape and stoichiometry of the building blocks. A tetraphenylethylene (TPE)-based tetrapyridyl donor is exploited as the bridging component, and coordination immobilization of the TPE unit within the rigid metallacyclic frameworks efficiently suppresses its intramolecular rotational motions. As a result, the fused polygons are innately emissive in dilute solution, representing an alternative to aggregation-induced emission. Upon further molecular aggregation, these metallacycles display aggregation-induced enhanced emissions. Interestingly, the fused rhomboid 7 shows a weaker fluorescence in dilute solutions relative to that of the fused triangle 8, while a reversal of emission intensities was observed in the aggregated state. These markedly different fluorescence efficiencies are likely due to the differences in the shapes of the fused polygons. Thus, this work shows that the properties of supramolecular coordination complexes can be affected by subtle structural factors, which can be controlled easily and precisely at the molecular level.

Multicomponent self-assembly of a pentanuclear Ir–Zn heterometal–organic polyhedron for carbon dioxide fixation and sulfite sequestration

An iridium-containing pentanuclear metal–organic polyhedron was constructedviaa subcomponent self-assembly. The three equatorial Zn(ii) ions in the structure induced atmospheric carbon dioxide transformation as carbonate and sulfur dioxide as sulfite with bonding to the three metal centers.

Dual stimuli-induced formation of a μ-hydroxido bridged [Zn9L5(μ-OH)6]12+ half-pipe

Low-symmetry metal–organic architectures that feature unusual binding motifs are useful for exploring new modes of guest recognition.

Low-symmetry metal–organic architectures that feature unusual binding motifs are useful for exploring new modes of guest recognition. Such structures remain difficult to create using current rational design principles. One approach to constructing such architectures is to employ ligands with coordination vectors oriented to preclude the formation of simple, low nuclearity molecular assemblies upon complexation to metal ions. Here we report two new supramolecular assemblies generated from such a ligand: a simple metastable [Zn₃L₃]⁶⁺ assembly, which was observed to convert to a more complex [Zn₉L₅(μ-OH)₆]¹²⁺ twisted half-pipe architecture. Two chemically distinct stimuli—an anionic template and a base—must be applied for the conversion to occur. Perchlorate, perrhenate, trifluoromethanesulfonate and 2-naphthalenesulfonate were found to act as competent templates for the [Zn₉L₅(μ-OH)₆]¹²⁺ structure.

Stacking Interactions Drive Selective Self-Assembly and Self-Sorting of Pyrene-Based M(II)4L6 Architectures

Subcomponent self-assembly of two isomeric bis(3-aminophenyl)pyrenes, 2-formylpyridine and the metal ions Fe(II), Co(II), and Zn(II) led to the formation of two previously unidentified structure types: a C2-symmetric M(II)4L6 assembly with meridionally coordinated metal centers, and a C3-symmetric self-included M(II)4L6 assembly with facially coordinated metal centers. In both structures the meta linkages within the ligands facilitate π-stacking between the pyrene panels of the ligands. A C2h-symmetric M(II)2L2 box was also obtained, which was observed to selectively bind electron-deficient aromatic guests between two parallel pyrene subunits. Similar donor-acceptor interactions drove the selective self-assembly of a singular M(II)4L4L'2 architecture incorporating both a pyrene-containing diamine and an electron-deficient NDI-based diamine. This heteroleptic architecture was shown to be thermodynamically favored over the corresponding homoleptic M(II)4L6 and M(II)4L'6 complexes, which were nonetheless stable in each others' absence. By contrast, an isomeric pyrene-based diamine was observed to undergo narcissistic self-sorting in the presence of the NDI-based diamine.