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Christin O, Roulland E. Optimizing the Synthesis Strategy of the Chlorinated Chain Characteristic to the Enacyloxin Series Using Models. J Org Chem 2024; 89:7210-7215. [PMID: 38709622 DOI: 10.1021/acs.joc.4c00626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
In this paper are presented the results of the preliminary studies conducted on two model substrates that allowed the testing of various strategies and set the proper conditions that thereafter culminated in the synthesis of the C1-C23 chain of enacyloxin-IIa and its congeners. Innovative strategic options were explored on each model allowing the stereochemical control of the following two elements: (a) the 2E, 4E, 6E, 8E, and 10Z chlorinated undecapentaenoic chain, thanks to Z-selective Kaneda's alkyne allylchlorination and an E-selective Pd/Cu allene-alkyne coupling and (b) the unusual syn-anti -OH/-Cl/-OCONH2 C17-C19 triad, thanks to a highly diastereoselective Mukaiyama aldol reaction.
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Affiliation(s)
- Orane Christin
- CNRS, CiTCoM, Faculté de Pharmacie, Université Paris Cité, 4, avenue de l'Observatoire, F-75006 Paris, France
| | - Emmanuel Roulland
- CNRS, CiTCoM, Faculté de Pharmacie, Université Paris Cité, 4, avenue de l'Observatoire, F-75006 Paris, France
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2
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Christin O, Roulland E. Advancements in Enacyloxins Total Synthesis: Access to the Chlorinated Polyunsaturated Chain Peculiar to this Promising Family of Antibiotics. Org Lett 2023; 25:6869-6874. [PMID: 37676860 DOI: 10.1021/acs.orglett.3c02477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/09/2023]
Abstract
The first synthesis of the protected chain specific to the enacyloxin antibiotic family is reported. The noticeable features are (a) the construction of the chlorinated undecapentaenoic moiety implementing the sequence Tsuji's alkyne syn allyl-chlorination, E-selective Pd/Cu-catalyzed allene-alkyne coupling, Horner-Wadsworth-Emmons olefination, dehydration; (b) control of the C18 chlorinated stereogenic center by organo-catalyzed aldehyde α-chlorination; and (c) the assemblage of this aldehyde with the C1-C16 ketone using a highly diastereoselective Mukaiyama aldol.
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Affiliation(s)
- Orane Christin
- CiTCoM, UMR 8038, CNRS-Université Paris Cité, Faculté de Pharmacie, 4, avenue de l'Observatoire, 75006 Paris, France
| | - Emmanuel Roulland
- CiTCoM, UMR 8038, CNRS-Université Paris Cité, Faculté de Pharmacie, 4, avenue de l'Observatoire, 75006 Paris, France
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3
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Gribble GW. Naturally Occurring Organohalogen Compounds-A Comprehensive Review. PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2023; 121:1-546. [PMID: 37488466 DOI: 10.1007/978-3-031-26629-4_1] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
The present volume is the third in a trilogy that documents naturally occurring organohalogen compounds, bringing the total number-from fewer than 25 in 1968-to approximately 8000 compounds to date. Nearly all of these natural products contain chlorine or bromine, with a few containing iodine and, fewer still, fluorine. Produced by ubiquitous marine (algae, sponges, corals, bryozoa, nudibranchs, fungi, bacteria) and terrestrial organisms (plants, fungi, bacteria, insects, higher animals) and universal abiotic processes (volcanos, forest fires, geothermal events), organohalogens pervade the global ecosystem. Newly identified extraterrestrial sources are also documented. In addition to chemical structures, biological activity, biohalogenation, biodegradation, natural function, and future outlook are presented.
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Affiliation(s)
- Gordon W Gribble
- Department of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
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4
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Ando K, Takaba C, Kodama M. One-Pot O 2-Oxidation and the Horner-Wadsworth-Emmons Reaction of Primary Alcohols for the Synthesis of ( Z)-α,β-Unsaturated Esters. J Org Chem 2022; 87:9723-9728. [PMID: 35822779 DOI: 10.1021/acs.joc.2c00763] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We developed one-pot oxidation/olefination procedures of primary alcohols giving Z-α,β-unsaturated esters 3. TEMPO-(CuCl or CuBr2)-(2,2'-bipyridine) (1:1:1) catalyzed O2 oxidation of primary alcohols in the presence of Z-selective Horner-Wadsworth-Emmons reagent 1b and K3PO4 or NaH gave 3 with Z/E = 84:16 to 96:4 in high yields. A stepwise reaction was also developed. After TEMPO-CuBr2-(2,2'-bipyridine)-K3PO4 (1:1:1:1) catalyzed O2 oxidation of alcohols in MeCN, the resulting mixture was treated with a THF solution of 1b and t-BuOK at -78 °C to 0 °C, giving 3 with higher selectivity (Z/E = 91:9 to 99:1).
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Affiliation(s)
- Kaori Ando
- Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Yanagido 1-1, Gifu 501-1193, Japan
| | - Chika Takaba
- Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Yanagido 1-1, Gifu 501-1193, Japan
| | - Masahiro Kodama
- Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, Yanagido 1-1, Gifu 501-1193, Japan
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5
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Meguro Y, Ito J, Nakagawa K, Kuwahara S. Total Synthesis of the Broad-Spectrum Antibiotic Amycolamicin. J Am Chem Soc 2022; 144:5253-5257. [PMID: 35297637 DOI: 10.1021/jacs.2c00647] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The total synthesis of the antibiotic amycolamicin with a hybrid molecular architecture composed of five ring systems, which exhibits potent antibacterial activity against a wide range of drug-resistant bacteria, has been achieved in a convergent manner. A protecting-group-free intramolecular Diels-Alder reaction of a hydroxy tetraenal intermediate promoted by two equivalents of Et2AlCl, which proceeds highly diastereoselectively via an endo-equatorial transition state, has been utilized to construct the trans-decalin moiety of the molecule. The full structure of amycolamicin was assembled by a completely stereoconvergent N-acylation of a northern N-glycoside unit (α-anomer/β-anomer = 1:1.1) with a southern β-keto thioester segment followed by installation of the central tetramic acid moiety.
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Affiliation(s)
- Yasuhiro Meguro
- Graduate School of Agricultural Science, Tohoku University, 468-1 Aramaki-Aza-Aoba, Aoba-ku, Sendai 980-0845, Japan
| | - Junya Ito
- Graduate School of Agricultural Science, Tohoku University, 468-1 Aramaki-Aza-Aoba, Aoba-ku, Sendai 980-0845, Japan
| | - Kiyotaka Nakagawa
- Graduate School of Agricultural Science, Tohoku University, 468-1 Aramaki-Aza-Aoba, Aoba-ku, Sendai 980-0845, Japan
| | - Shigefumi Kuwahara
- Graduate School of Agricultural Science, Tohoku University, 468-1 Aramaki-Aza-Aoba, Aoba-ku, Sendai 980-0845, Japan
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6
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Wunderlich J, Roß T, Schröder M, Hahn F. Step-Economic Synthesis of Biomimetic β-Ketopolyene Thioesters and Demonstration of Their Usefulness in Enzymatic Biosynthesis Studies. Org Lett 2020; 22:4955-4959. [PMID: 32610930 DOI: 10.1021/acs.orglett.0c01348] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Studies on the biosynthetic processing of polyene thioester intermediates are complicated by limited access to appropriate substrate surrogates. We present a step-economic synthetic access to biomimetic β-ketopolyene thioesters that is based on an Ir-catalyzed reductive Horner-Wadsworth-Emmons olefination. New β-ketotriene and pentaenethioates of pantetheine and N-acetylcysteamine were exemplarily synthesized via short and concise routes. The usefulness of these compounds was demonstrated in an in vitro assay with the ketoreductase domain MycKRB from mycolactone biosynthesis.
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Affiliation(s)
- Johannes Wunderlich
- Fakultät Biologie, Chemie und Geologie, Department of Chemistry, Universität Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
| | - Theresa Roß
- Fakultät Biologie, Chemie und Geologie, Department of Chemistry, Universität Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
| | - Marius Schröder
- Fakultät Biologie, Chemie und Geologie, Department of Chemistry, Universität Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
| | - Frank Hahn
- Fakultät Biologie, Chemie und Geologie, Department of Chemistry, Universität Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany
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Panduwawala TD, Iqbal S, Thompson AL, Genov M, Pretsch A, Pretsch D, Liu S, Ebright RH, Howells A, Maxwell A, Moloney MG. Functionalised bicyclic tetramates derived from cysteine as antibacterial agents. Org Biomol Chem 2019; 17:5615-5632. [PMID: 31120090 PMCID: PMC6686852 DOI: 10.1039/c9ob01076a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Routes to bicyclic tetramates derived from cysteine permitting ready incorporation of functionality at two different points around the periphery of a heterocyclic skeleton are reported. This has enabled the identification of systems active against Gram-positive bacteria, some of which show gyrase and RNA polymerase inhibitory activity. In particular, tetramates substituted with glycosyl side chains, chosen to impart polarity and aqueous solubility, show high antibacterial activity coupled with modest gyrase/polymerase activity in two cases. An analysis of physicochemical properties indicates that the antibacterially active tetramates generally occupy physicochemical space with MW of 300-600, clog D7.4 of -2.5 to 4 and rel. PSA of 11-22%. This work demonstrates that biologically active 3D libraries are readily available by manipulation of a tetramate skeleton.
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Affiliation(s)
- Tharindi D Panduwawala
- Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, UK.
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8
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Affiliation(s)
- Keith P. Reber
- Department of Chemistry, Towson University, Towson, MD 21252, USA
| | - Hannah E. Burdge
- Department of Chemistry, Towson University, Towson, MD 21252, USA
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Abstract
Covering: 2016. Previous review: Nat. Prod. Rep., 2017, 34, 235-294This review covers the literature published in 2016 for marine natural products (MNPs), with 757 citations (643 for the period January to December 2016) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1277 in 432 papers for 2016), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
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10
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Josa-Culleré L, Towers C, Thompson AL, Moloney MG. Chemoselective Formation and Reaction of Densely Functionalised Bicyclic Tetramic Acids and Their Biological Activity. European J Org Chem 2017. [DOI: 10.1002/ejoc.201701393] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Laia Josa-Culleré
- Chemistry Research Laboratory; University of Oxford; 12 Mansfield Road OX1 3TA Oxford United Kingdom
| | - Christopher Towers
- Department of Oncology; University of Oxford; Old Road Campus Research Building OX3 7LJ Oxford United Kingdom
| | - Amber L. Thompson
- Chemistry Research Laboratory; University of Oxford; 12 Mansfield Road OX1 3TA Oxford United Kingdom
| | - Mark G. Moloney
- Chemistry Research Laboratory; University of Oxford; 12 Mansfield Road OX1 3TA Oxford United Kingdom
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12
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Petermichl M, Schobert R. Total Synthesis of the Diglycosidic Tetramic Acid Ancorinoside A. Chemistry 2017; 23:14743-14746. [DOI: 10.1002/chem.201704379] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Indexed: 11/10/2022]
Affiliation(s)
- Markus Petermichl
- Department of Chemistry; University Bayreuth; Universitaetsstr. 30 95447 Bayreuth Germany
| | - Rainer Schobert
- Department of Chemistry; University Bayreuth; Universitaetsstr. 30 95447 Bayreuth Germany
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13
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Abstract
Cladosin C was built up in ten steps comprising an N-acylation of dehydrovaline with a functionalised thioester, a Dieckmann cylisation, and an OH ⇒ NH2 exchange with 2,4-dimethoxybenzylamine.
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Affiliation(s)
- David Linder
- Department of Chemistry
- University Bayreuth
- D-95440 Bayreuth
- Germany
| | - Rainer Schobert
- Department of Chemistry
- University Bayreuth
- D-95440 Bayreuth
- Germany
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