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Mishra B, Yuan Y, Yu H, Kang H, Gao J, Daniels R, Chen X. Synthetic Sialosides Terminated with 8-N-Substituted Sialic Acid as Selective Substrates for Sialidases from Bacteria and Influenza Viruses. Angew Chem Int Ed Engl 2024:e202403133. [PMID: 38713874 DOI: 10.1002/anie.202403133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 04/17/2024] [Accepted: 05/02/2024] [Indexed: 05/09/2024]
Abstract
Sialosides containing C8-modified sialic acids are challenging synthetic targets but potentially useful probes for diagnostic substrate profiling of sialidases and elucidating the binding specificity of sialic acid-interacting proteins. Here, we demonstrate efficient chemoenzymatic methods for synthesizing para-nitrophenol-tagged α2-3- and α2-6-linked sialyl galactosides containing C8-acetamido, C8-azido, or C8-amino derivatized N-acetylneuraminic acid (Neu5Ac). High-throughput substrate specificity studies showed that the C8-modification of sialic acid significantly changes its recognition by sialidases from humans, various bacteria, and different influenza A and B viruses. Sialosides carrying Neu5Ac with a C8-azido modification were generally well tolerated by all the sialidases we tested, whereas sialosides containing C8-acetamido-modified Neu5Ac were only cleaved by selective bacterial sialidases. In contrast, sialosides with C8-amino-modified Neu5Ac were cleaved by a combination of selective bacterial and influenza A virus sialidases. These results indicate that sialosides terminated with a C8-amino or C8-acetamido-modified sialic acid can be used with other sialosides for diagnostic profiling of disease-causing sialidase-producing pathogens.
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Affiliation(s)
- Bijoyananda Mishra
- Department of Chemistry, University of California, One Shields Avenue, Davis, California, 95616, United States
| | - Yue Yuan
- Department of Chemistry, University of California, One Shields Avenue, Davis, California, 95616, United States
| | - Hai Yu
- Department of Chemistry, University of California, One Shields Avenue, Davis, California, 95616, United States
| | - Hyeog Kang
- Division of Viral Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland, 20993, United States
| | - Jin Gao
- Division of Viral Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland, 20993, United States
| | - Robert Daniels
- Division of Viral Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland, 20993, United States
| | - Xi Chen
- Department of Chemistry, University of California, One Shields Avenue, Davis, California, 95616, United States
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2
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Tseng HK, Su YY, Lai PJ, Lo SL, Liu HC, Reddy SR, Chen L, Lin CC. Chemoenzymatic Synthesis of GAA-7 Glycan Analogues and Evaluation of Their Neuritogenic Activities. ACS Chem Neurosci 2024; 15:656-670. [PMID: 38206798 DOI: 10.1021/acschemneuro.3c00732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2024] Open
Abstract
Ganglioside GAA-7 exhibits higher neurite outgrowth than ganglioside GM1a and most echinodermatous gangliosides (EGs) when tested on neuron-like rat adrenal pheochromocytoma (PC12) cells in the presence of nerve growth factor (NGF). The unique structure of GAA-7 glycan, containing an uncommon sialic acid (8-O-methyl-N-glycolylneuraminic acid) and sialic acid-α-2,3-GalNAc linkage, makes it challenging to synthesize. We recently developed a streamlined method to chemoenzymatically synthesize GAA-7 glycan and employed this modular strategy to efficiently prepare a library of GAA-7 glycan analogues incorporating N-modified or 8-methoxyl sialic acids. Most of these synthetic glycans exhibited moderate efficacy in promoting neuronal differentiation of PC12 cells. Among them, the analogue containing common sialic acid shows greater potential than the GAA-7 glycan itself. This result reveals that methoxy modification is not essential for neurite outgrowth. Consequently, the readily available analogue presents a promising model for further biological investigations.
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Affiliation(s)
- Hsin-Kai Tseng
- Department of Chemistry, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | - Yung-Yu Su
- Department of Chemistry, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | - Po-Jen Lai
- Institute of Molecular Medicine, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | - Shao-Lun Lo
- Institute of Molecular Medicine, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | - Hsien-Chein Liu
- Department of Chemistry, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | | | - Linyi Chen
- Institute of Molecular Medicine, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
| | - Chun-Cheng Lin
- Department of Chemistry, National Tsing Hua University, 101 Section 2, Kuang Fu Road, Hsinchu 30013, Taiwan
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, 100, Shih-Chuan First Road, Kaohsiung 80708, Taiwan
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3
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Liu CC, Ye J, Cao H. Chemical Evolution of Enzyme-Catalyzed Glycosylation. Acc Chem Res 2024. [PMID: 38286791 DOI: 10.1021/acs.accounts.3c00754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2024]
Abstract
ConspectusThe limited availability of structurally well-defined diverse glycans remains a major obstacle for deciphering biological functions as well as biomedical applications of carbohydrates. Despite tremendous progress that has been made in past decades, the synthesis of structurally well-defined complex glycans still represents one of the most challenging topics in synthetic chemistry. Chemical synthesis of glycans is a time-consuming and labor-intensive process that requires elaborate planning and skilled personnel. In contrast, glycosyltransferase-catalyzed enzymatic synthesis provides a more efficient, convenient, low-cost, and sustainable alternative to affording diverse and complex glycans. However, the existing methods are still insufficient to fulfill the increasing demand for specific synthetic glycan libraries necessary for functional glycomics research. This is mainly attributed to the inherent character of the glycan biosynthetic pathway. In nature, there are too many glycosyltransferases involved in the in vivo glycan synthesis, but only a small number of them are available for in vitro enzymatic synthesis. For instance, humans have over 200 glycosyltransferases, but only a few of them could be produced from the conventional bacterial expression system, and most of these membrane-associated enzymes could be overexpressed only in eukaryotic cells. Moreover, the glycan biosynthetic pathway is a nontemplate-driven process, which eventually ends up with heterogeneous glycan product mixtures. Therefore, it is not a practical solution for the in vitro enzymatic synthesis of complex glycans by simply copying the glycan biosynthetic pathway.In the past decade, we have tried to develop a simplified and transformable approach to the enzymatic modular assembly of a human glycan library. Despite the structural complexity of human glycans, the glycoinformatic analysis based on the known glycan structure database and the human glycosyltransferase database indicates that there are approximately 56 disaccharide patterns present in the human glycome and only 16 disaccharide linkages are required to account for over 80% of the total disaccharide fragments, while 35 disaccharide linkages are sufficient to cover over 95% of all disaccharide fragments of human glycome. Regardless of the substrate specificity, if one glycosyltransferase could be used for the synthesis of all of the same glycosidic linkages in human glycome, it will require only a few dozen glycosyltransferases for the assembly of entire human glycans. According to the glycobioinformatics analysis results, we rationally designed about two dozen enzyme modules for the synthesis of over 20 common glycosidic linkages in human glycome, in which each enzyme module contains a glycosyltransferase and a group of enzymes for the in situ generation of a nucleotide-activated sugar donor. By sequential glycosylation using orchestrated enzyme modules, we have completed the synthesis of over 200 structurally well-defined complex human glycans including blood group antigens, O-mannosyl glycans, human milk oligosaccharides, and others. To overcome the product microheterogeneity problem of enzymatic synthesis in the nontemplate-driven glycan biosynthetic pathway, we developed several substrate engineering strategies to control or manipulate the outcome of glycosyltransferase-catalyzed reactions for the precise synthesis of structurally well-defined isomeric complex glycans.
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Affiliation(s)
- Chang-Cheng Liu
- National Glycoengineering Research Center, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao 266237, China
| | - Jinfeng Ye
- National Glycoengineering Research Center, NMPA Key Laboratory for Quality Research and Evaluation of Carbohydrate-Based Medicine, and Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao 266237, China
| | - Hongzhi Cao
- Key Laboratory of Marine Drugs of Ministry of Education, Shandong Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
- Laboratory for Marine Drugs and Bioproducts, Laoshan Laboratory, Qingdao 266237, China
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4
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Chen X. Enabling Chemoenzymatic Strategies and Enzymes for Synthesizing Sialyl Glycans and Sialyl Glycoconjugates. Acc Chem Res 2024; 57:234-246. [PMID: 38127793 PMCID: PMC10795189 DOI: 10.1021/acs.accounts.3c00614] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Revised: 12/04/2023] [Accepted: 12/04/2023] [Indexed: 12/23/2023]
Abstract
Sialic acids are fascinating negatively charged nine-carbon monosaccharides. Sialic acid-containing glycans and glycoconjugates are structurally diverse, functionally important, and synthetically challenging molecules. We have developed highly efficient chemoenzymatic strategies that combine the power of chemical synthesis and enzyme catalysis to make sialic acids, sialyl glycans, sialyl glycoconjugates, and their derivatives more accessible, enabling the efforts to explore their functions and applications. The Account starts with a brief description of the structural diversity and the functional importance of naturally occurring sialic acids and sialosides. The development of one-pot multienzyme (OPME) chemoenzymatic sialylation strategies is then introduced, highlighting its advantages in synthesizing structurally diverse sialosides with a sialyltransferase donor substrate engineering tactic. With the strategy, systematic access to sialosides containing different sialic acid forms with modifications at C3/4/5/7/8/9, various internal glycans, and diverse sialyl linkages is now possible. Also briefly described is the combination of the OPME sialylation strategy with bacterial sialidases for synthesizing sialidase inhibitors. With the goal of simplifying the product purification process for enzymatic glycosylation reactions, glycosphingolipids that contain a naturally existing hydrophobic tag are attractive targets for chemoenzymatic total synthesis. A user-friendly highly efficient chemoenzymatic strategy is developed which involves three main processes, including chemical synthesis of lactosyl sphingosine as a water-soluble hydrophobic tag-containing intermediate, OPME enzymatic extension of its glycan component with a single C18-cartridge purification of the product, followed by a facile chemical acylation reaction. The strategy allows the introduction of different sialic acid forms and diverse fatty acyl chains into the products. Gram-scale synthesis has been demonstrated. OPME sialylation has also been demonstrated for the chemoenzymatic synthesis of sialyl glycopeptides and in vitro enzymatic N-glycan processing for the formation of glycoproteins with disialylated biantennary complex-type N-glycans. For synthesizing human milk oligosaccharides (HMOs) which are glycans with a free reducing end, acceptor substrate engineering and process engineering strategies are developed, which involve the design of a hydrophobic tag that can be easily installed into the acceptor substrate to allow facile purification of the product from enzymatic reactions and can be conveniently removed in the final step to produce target molecules. The process engineering involves heat-inactivation of enzymes in the intermediate steps in multistep OPME reactions for the production of long-chain sialoside targets in a single reaction pot and with a single C18-cartridge purification process. In addition, a chemoenzymatic synthon strategy has been developed. It involves the design of a derivative of the sialyltransferase donor substrate precursor, which is tolerated by enzymes in OPME reactions, introduced to enzymatic products, and then chemically converted to the desired target structures in the final step. The chemoenzymatic synthon approach has been used together with the acceptor substrate engineering method in the synthesis of complex bacterial glycans containing sialic acids, legionaminic acids, and derivatives. The biocatalysts characterized and their engineered mutants developed by the Chen group are described, with highlights on synthetically useful enzymes. We anticipate further development of chemoenzymatic strategies and biocatalysts to enable exploration of the sialic acid space.
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Affiliation(s)
- Xi Chen
- Department of Chemistry, University of California, Davis, California 95616, United States
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5
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Yu H, Zheng Z, Zhang L, Yang X, Varki A, Chen X. Chemoenzymatic Synthesis of N-Acetyl Analogues of 9- O-Acetylated b-Series Gangliosides. Tetrahedron 2023; 142:133522. [PMID: 37981995 PMCID: PMC10653377 DOI: 10.1016/j.tet.2023.133522] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2023]
Abstract
The stable N-acetyl analogues of biologically important 9-O-acetylated b-series gangliosides including 9NAc-GD3, 9NAc-GD2, 9NAc-GD1b, and 9NAc-GT1b were chemoenzymatically synthesized from a GM3 sphingosine. Two chemoenzymatic methods using either 6-azido-6-deoxy-N-acetylmannosamine (ManNAc6N3) as a chemoenzymatic synthon or 6-acetamido-6-deoxy-N-acetylmannosamine (ManNAc6NAc) as an enzymatic precursor for 9-acetamido-9-deoxy-N-acetylneuraminic acid (Neu5Ac9NAc) were developed and compared for the synthesis of 9NAc-GD3. The latter method was found to be more efficient and was used to produce the desired 9-N-acetylated glycosylsphingosines. Furthermore, glycosylsphingosine acylation reaction conditions were improved to obtain target 9-N-acetylated gangliosides in a faster reaction with an easier purification process compared to the previous acylation conditions.
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Affiliation(s)
- Hai Yu
- Department of Chemistry, University of California, Davis, California, 95616, USA
| | - Zimin Zheng
- Department of Chemistry, University of California, Davis, California, 95616, USA
| | - Libo Zhang
- Department of Chemistry, University of California, Davis, California, 95616, USA
| | - Xiaohong Yang
- Department of Chemistry, University of California, Davis, California, 95616, USA
| | - Ajit Varki
- Departments of Medicine and Cellular & Molecular Medicine, Glycobiology Research and Training Center, University of California, San Diego, California, 92093, USA
| | - Xi Chen
- Department of Chemistry, University of California, Davis, California, 95616, USA
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6
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Kooner A, Yuan Y, Yu H, Kang H, Klenow L, Daniels R, Chen X. Sialosides Containing 7- N-Acetyl Sialic Acid Are Selective Substrates for Neuraminidases from Influenza A Viruses. ACS Infect Dis 2022; 9:33-41. [PMID: 36455156 PMCID: PMC9840695 DOI: 10.1021/acsinfecdis.2c00502] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
Sialidases or neuraminidases are sialic-acid-cleaving enzymes that are expressed by a broad spectrum of organisms, including pathogens. In nature, sialic acids are monosaccharides with diverse structural variations, but the lack of novel probes has made it difficult to determine how sialic acid modifications impact the recognition by sialidases. Here, we used a chemoenzymatic synthon strategy to generate a set of α2-3- and α2-6-linked sialoside probes that contain 7-N-acetyl or 7,9-di-N-acetyl sialic acid as structure mimics for those containing the less stable naturally occurring 7-O-acetyl- or 7,9-di-O-acetyl modifications. These probes were used to compare the substrate specificity of several sialidases from different origins. Our results show that 7-N-acetyl sialic acid was readily cleaved by neuraminidases from H1N1 and H3N2 influenza A viruses, but not by sialidases of human or bacterial origin, thereby indicating that the influenza enzymes possess a distinctive and more promiscuous substrate binding pocket.
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Affiliation(s)
- Anoopjit
Singh Kooner
- Department
of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Yue Yuan
- Department
of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Hai Yu
- Department
of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Hyeog Kang
- Division
of Viral Products, Center for Biologics
Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland 20993, United States
| | - Laura Klenow
- Division
of Viral Products, Center for Biologics
Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland 20993, United States
| | - Robert Daniels
- Division
of Viral Products, Center for Biologics
Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland 20993, United States
| | - Xi Chen
- Department
of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States,
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7
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Hu ZX, Cheng C, Li YQ, Qi XH, Wang T, Liu L, Voglmeir J. Recombinant snail sialic acid aldolase is promiscuous towards aliphatic aldehydes. Chembiochem 2022; 23:e202200074. [PMID: 35543120 DOI: 10.1002/cbic.202200074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 05/10/2022] [Indexed: 11/08/2022]
Abstract
Aldolases are enzymes that reversibly catalyze the cleavage of carbon-carbon bonds. Here we describe a recombinant sialic acid aldolase originating from the freshwater snail Biomphalaria glabrata (sNPL), and compare its substrate spectrum with a sialic acid aldolase originating from chicken (chNPL). In contrast to vertebrate animals which can synthesize, degrade, and incorporate sialic acids on glycoconjugate ubiquitously, snails (as all mollusks) cannot synthesize sialic acids endogenously, and therefore the biological function and substrate scope of sNPL ought to differ significantly from vertebrate sialic aldolases such as chNPL. sNPL was active towards a series of sialic acid derivatives but was in contrast to chNPL unable to catalyze the cleavage of N-acetylneuraminic acid into N-acetylmannosamine and pyruvate. Interestingly, chNPL and sNPL showed contrasting C4 (R) / (S) diastereoselectivity towards the substrates d-mannose and d-galactose in the presence of pyruvate. In addition, sNPL was also able to synthesize a series of 4-hydroxy-2-oxoates using the corresponding aliphatic aldehyde substrates in the presence of pyruvate, which could be not achieved by chNPL.
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Affiliation(s)
- Zi-Xuan Hu
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Cheng Cheng
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Yu-Qian Li
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Xiao-Han Qi
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Ting Wang
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Li Liu
- Nanjing Agricultural University - Weigang Campus: Nanjing Agricultural University, College of Food Science and Technology, CHINA
| | - Josef Voglmeir
- Nanjing Agricultural University, College of Food Science And Technology, 1 Weigang, 210095, Nanjing, CHINA
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8
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Siyabalapitiya Arachchige S, Crich D. Syntheses of Legionaminic Acid, Pseudaminic Acid, Acetaminic Acid, 8- epi-Acetaminic Acid, and 8- epi-Legionaminic Acid Glycosyl Donors from N-Acetylneuraminic Acid by Side Chain Exchange. Org Lett 2022; 24:2998-3002. [PMID: 35420827 PMCID: PMC9066425 DOI: 10.1021/acs.orglett.2c00894] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Metaperiodate cleavage of the glycerol side chain from an N-acetyl neuraminic acid-derived thioglycoside and condensation with the two enantiomers of the Ellman sulfinamide afford two diastereomeric N-sulfinylimines from which bacterial sialic acid donors with the legionaminic and acetaminic acid configurations and their 8-epi-isomers are obtained by samarium iodide-mediated coupling with acetaldehyde and subsequent manipulations. A variation on the theme, with inversion of the configuration at C5, similarly provides two differentially protected pseudaminic acid donors.
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Affiliation(s)
- Sameera Siyabalapitiya Arachchige
- Department of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States.,Department of Chemistry, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States.,Complex Carbohydrate Research Center, University of Georgia, 315 Riverbend Road, Athens, Georgia 30602, United States
| | - David Crich
- Department of Pharmaceutical and Biomedical Sciences, University of Georgia, 250 West Green Street, Athens, Georgia 30602, United States.,Department of Chemistry, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States.,Complex Carbohydrate Research Center, University of Georgia, 315 Riverbend Road, Athens, Georgia 30602, United States
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9
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Mondal S, Aher RD, Bethi V, Lin YJ, Taniguchi T, Monde K, Tanaka F. Control of Reactions of Pyruvates by Catalysts: Direct Enantioselective Mannich Reactions of Pyruvates Catalyzed by Amine-based Catalyst Systems. Org Lett 2022; 24:1853-1858. [DOI: 10.1021/acs.orglett.2c00436] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Santanu Mondal
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Ravindra D. Aher
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Venkati Bethi
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Yu-Ju Lin
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
| | - Tohru Taniguchi
- Faculty of Advanced Life Science, Hokkaido University, Kita 21 Nishi 11, Sapporo 001-0021, Japan
| | - Kenji Monde
- Faculty of Advanced Life Science, Hokkaido University, Kita 21 Nishi 11, Sapporo 001-0021, Japan
| | - Fujie Tanaka
- Chemistry and Chemical Bioengineering Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna, Okinawa 904-0495, Japan
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10
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Meng X, Boons GJ, Wösten MMSM, Wennekes T. Metabolic Labeling of Legionaminic Acid in Flagellin Glycosylation of Campylobacter jejuni Identifies Maf4 as a Putative Legionaminyl Transferase. Angew Chem Int Ed Engl 2021; 60:24811-24816. [PMID: 34519150 PMCID: PMC9298399 DOI: 10.1002/anie.202107181] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2021] [Indexed: 12/19/2022]
Abstract
Campylobacter jejuni is the major human food‐borne pathogen. Its bipolar flagella are heavily O‐glycosylated with microbial sialic acids and essential for its motility and pathogenicity. However, both the glycosylation of flagella and the exact contribution of legionaminic acid (Leg) to flagellar activity is poorly understood. Herein, we report the development of a metabolic labeling method for Leg glycosylation on bacterial flagella with probes based on azide‐modified Leg precursors. The hereby azido‐Leg labeled flagellin could be detected by Western blot analysis and imaged on intact bacteria. Using the probes on C. jejuni and its isogenic maf4 mutant we also further substantiated the identification of Maf4 as a putative Leg glycosyltransferase. Further evidence was provided by UPLC–MS detection of labeled CMP‐Leg and an in silico model of Maf4. This method and the developed probes will facilitate the study of Leg glycosylation and the functional role of this modification in C. jejuni motility and invasiveness.
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Affiliation(s)
- Xianke Meng
- Department of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands
| | - Geert-Jan Boons
- Department of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands.,Complex Carbohydrate Research Center and Department of Chemistry, University of Georgia, 315 Riverbend Road, Athens, GA, 30602, USA
| | - Marc M S M Wösten
- Department Biomolecular Health Sciences, Utrecht University, Yalelaan 1, 3584 CL, Utrecht, The Netherlands
| | - Tom Wennekes
- Department of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research, Utrecht University, Universiteitsweg 99, 3584 CG, Utrecht, The Netherlands
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11
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Meng X, Boons G, Wösten MMSM, Wennekes T. Metabolic Labeling of Legionaminic Acid in Flagellin Glycosylation of
Campylobacter jejuni
Identifies Maf4 as a Putative Legionaminyl Transferase. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202107181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Xianke Meng
- Department of Chemical Biology and Drug Discovery Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
| | - Geert‐Jan Boons
- Department of Chemical Biology and Drug Discovery Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
- Complex Carbohydrate Research Center and Department of Chemistry University of Georgia 315 Riverbend Road Athens GA 30602 USA
| | - Marc M. S. M. Wösten
- Department Biomolecular Health Sciences Utrecht University Yalelaan 1 3584 CL Utrecht The Netherlands
| | - Tom Wennekes
- Department of Chemical Biology and Drug Discovery Utrecht Institute for Pharmaceutical Sciences and Bijvoet Center for Biomolecular Research Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
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12
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Kooner AS, Diaz S, Yu H, Santra A, Varki A, Chen X. Chemoenzymatic Synthesis of Sialosides Containing 7- N- or 7,9-Di- N-acetyl Sialic Acid as Stable O-Acetyl Analogues for Probing Sialic Acid-Binding Proteins. J Org Chem 2021; 86:14381-14397. [PMID: 34636559 DOI: 10.1021/acs.joc.1c01091] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A novel chemoenzymatic synthon strategy has been developed to construct a comprehensive library of α2-3- and α2-6-linked sialosides containing 7-N- or 7,9-di-N-acetyl sialic acid, the stable analogue of naturally occurring 7-O-acetyl- or 7,9-di-O-acetyl-sialic acid. Diazido and triazido-mannose derivatives that were readily synthesized chemically from inexpensive galactose were shown to be effective chemoenzymatic synthons. Together with bacterial sialoside biosynthetic enzymes with remarkable substrate promiscuity, they were successfully used in one-pot multienzyme (OPME) sialylation systems for highly efficient synthesis of sialosides containing multiple azido groups. Conversion of the azido groups to N-acetyl groups generated the desired sialosides. The hydrophobic and UV-detectable benzyloxycarbonyl (Cbz) group introduced in the synthetic acceptors of sialyltransferases was used as a removable protecting group for the propylamine aglycon of the target sialosides. The resulting N-acetyl sialosides were novel stable probes for sialic acid-binding proteins such as plant lectin MAL II, which bond strongly to sialyl T antigens with or without an N-acetyl at C7 or at both C7 and C9 in the sialic acid.
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Affiliation(s)
- Anoopjit Singh Kooner
- Department of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Sandra Diaz
- Department of Medicine, University of California, San Diego, California 92093, United States.,Department of Cellular & Molecular Medicine, Glycobiology Research and Training Center, University of California, San Diego, California 92093, United States
| | - Hai Yu
- Department of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Abhishek Santra
- Department of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
| | - Ajit Varki
- Department of Medicine, University of California, San Diego, California 92093, United States.,Department of Cellular & Molecular Medicine, Glycobiology Research and Training Center, University of California, San Diego, California 92093, United States
| | - Xi Chen
- Department of Chemistry, University of California, One Shields Avenue, Davis, California 95616, United States
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13
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Na L, Li R, Chen X. Recent progress in synthesis of carbohydrates with sugar nucleotide-dependent glycosyltransferases. Curr Opin Chem Biol 2021. [PMID: 33310623 DOI: 10.1186/10.1016/j.cbpa.2020.10.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Sugar nucleotide-dependent glycosyltransferases (GTs) are key enzymes that catalyze the formation of glycosidic bonds in nature. They have been increasingly applied in the synthesis of complex carbohydrates and glycoconjugates with or without in situ generation of sugar nucleotides. Human GTs are becoming more accessible and new bacterial GTs have been identified and characterized. An increasing number of crystal structures elucidated for GTs from mammalian and bacterial sources facilitate structure-based design of mutants as improved catalysts for synthesis. Automated platforms have also been developed for chemoenzymatic synthesis of carbohydrates. Recent progress in applying sugar nucleotide-dependent GTs in enzymatic and chemoenzymatic synthesis of mammalian glycans and glycoconjugates, bacterial surface glycans, and glycosylated natural products from bacteria and plants are reviewed.
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Affiliation(s)
- Lan Na
- Department of Chemistry, University of California Davis, Davis, CA, USA
| | - Riyao Li
- Department of Chemistry, University of California Davis, Davis, CA, USA
| | - Xi Chen
- Department of Chemistry, University of California Davis, Davis, CA, USA.
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14
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Dussouy C, Téletchéa S, Lambert A, Charlier C, Botez I, De Ceuninck F, Grandjean C. Access to Galectin-3 Inhibitors from Chemoenzymatic Synthons. J Org Chem 2020; 85:16099-16114. [PMID: 33200927 DOI: 10.1021/acs.joc.0c01927] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Chemoenzymatic strategies are useful for providing both regio- and stereoselective access to bioactive oligosaccharides. We show herein that a glycosynthase mutant of a Thermus thermophilus α-glycosidase can react with unnatural glycosides such as 6-azido-6-deoxy-d-glucose/glucosamine to lead to β-d-galactopyranosyl-(1→3)-d-glucopyranoside or β-d-galactopyranosyl-(1→3)-2-acetamido-2-deoxy-d-glucopyranoside derivatives bearing a unique azide function. Taking advantage of the orthogonality between the azide and the hydroxyl functional groups, the former was next selectively reacted to give rise to a library of galectin-3 inhibitors. Combining enzyme substrate promiscuity and bioorthogonality thus appears as a powerful strategy to rapidly access to sugar-based ligands.
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Affiliation(s)
- Christophe Dussouy
- Université de Nantes, CNRS, Unité Fonctionnalité et Ingénierie des Protéines (UFIP), UMR 628, F-44000 Nantes, France
| | - Stéphane Téletchéa
- Université de Nantes, CNRS, Unité Fonctionnalité et Ingénierie des Protéines (UFIP), UMR 628, F-44000 Nantes, France
| | - Annie Lambert
- Université de Nantes, CNRS, Unité Fonctionnalité et Ingénierie des Protéines (UFIP), UMR 628, F-44000 Nantes, France
| | - Cathy Charlier
- Université de Nantes, CNRS, Unité Fonctionnalité et Ingénierie des Protéines (UFIP), UMR 628, F-44000 Nantes, France.,Université de Nantes, CNRS, Plateforme IMPACT, UMR 6286, F-44000 Nantes, France
| | - Iuliana Botez
- Institut de Recherches Servier, Croissy-sur-Seine, 78290 Croissy, France
| | | | - Cyrille Grandjean
- Université de Nantes, CNRS, Unité Fonctionnalité et Ingénierie des Protéines (UFIP), UMR 628, F-44000 Nantes, France
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15
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Recent progress in synthesis of carbohydrates with sugar nucleotide-dependent glycosyltransferases. Curr Opin Chem Biol 2020; 61:81-95. [PMID: 33310623 DOI: 10.1016/j.cbpa.2020.10.007] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Revised: 10/15/2020] [Accepted: 10/26/2020] [Indexed: 12/12/2022]
Abstract
Sugar nucleotide-dependent glycosyltransferases (GTs) are key enzymes that catalyze the formation of glycosidic bonds in nature. They have been increasingly applied in the synthesis of complex carbohydrates and glycoconjugates with or without in situ generation of sugar nucleotides. Human GTs are becoming more accessible and new bacterial GTs have been identified and characterized. An increasing number of crystal structures elucidated for GTs from mammalian and bacterial sources facilitate structure-based design of mutants as improved catalysts for synthesis. Automated platforms have also been developed for chemoenzymatic synthesis of carbohydrates. Recent progress in applying sugar nucleotide-dependent GTs in enzymatic and chemoenzymatic synthesis of mammalian glycans and glycoconjugates, bacterial surface glycans, and glycosylated natural products from bacteria and plants are reviewed.
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16
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Li R, Kooner AS, Muthana SM, Yuan Y, Yu H, Chen X. A Chemoenzymatic Synthon Strategy for Synthesizing N-Acetyl Analogues of O-Acetylated N. meningitidis W Capsular Polysaccharide Oligosaccharides. J Org Chem 2020; 85:16157-16165. [PMID: 33164526 DOI: 10.1021/acs.joc.0c02134] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
O-Acetylated sialic acid has been found in the Neisseria meningitidis serogroup W (NmW) capsular polysaccharide (CPS) and is a required structural component of clinically used NmW CPS-based polysaccharide and polysaccharide-conjugate vaccines. The role of sialic acid O-acetylation in NmW CPS, however, is not clearly understood. This is partially due to the lack of a precise control of the percentage and the location of O-acetylation which is labile and susceptible to migration. We explore chemoenzymatic synthetic strategies for preparing N-acetylated analogues of O-acetylated NmW CPS oligosaccharides which can serve as structurally stable probe mimics. Substrate specificity studies of NmW CPS polymerase (NmSiaDW) identified 4-azido-4-deoxy-N-acetylmannosamine (ManNAc4N3) and 6-azido-6-deoxy-N-acetylmannosamine (ManNAc6N3) as suitable chemoenzymatic synthons for synthesizing N-acetyl analogues of NmW CPS oligosaccharides containing 7-O-acetyl-N-acetylneuraminic acid (Neu5,7Ac2) and/or 9-O-acetyl-N-acetylneuraminic acid (Neu5,9Ac2). The synthesis was achieved by NmSiaDW-dependent sequential one-pot multienzyme (OPME) strategy with in situ generation of the corresponding sugar nucleotides from simple monosaccharides or derivatives to form N3-oligosaccharides which were converted to the desired NAc-oligosaccharides by an efficient one-step chemical transformation.
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Affiliation(s)
- Riyao Li
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States
| | - Anoopjit S Kooner
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States
| | - Saddam M Muthana
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States.,Department of Chemistry, Alfaisal University, Riyadh 11533, Kingdom of Saudi Arabia
| | - Yue Yuan
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States
| | - Hai Yu
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States
| | - Xi Chen
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, California 95616, United States
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17
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Desai AV, Morris RE, Armstrong AR. Advances in Organic Anode Materials for Na-/K-Ion Rechargeable Batteries. CHEMSUSCHEM 2020; 13:4866-4884. [PMID: 32672396 PMCID: PMC7540706 DOI: 10.1002/cssc.202001334] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Revised: 06/22/2020] [Indexed: 06/05/2023]
Abstract
Electrochemical energy storage (EES) devices are gaining ever greater prominence in the quest for global energy security. With increasing applications and widening scope, rechargeable battery technology is gradually finding avenues for more abundant and sustainable systems such as Na-ion (NIB) and K-ion batteries (KIB). Development of suitable electrode materials lies at the core of this transition. Organic redox-active molecules are attractive candidates as negative electrode materials owing to their low redox potentials and the fact that they can be obtained from biomass. Also, the rich structural diversity allows integration into several solid-state polymeric materials. Research in this domain is increasingly focused on deploying molecular engineering to address specific electrochemical limitations that hamper competition with rival materials. This Minireview aims to summarize the advances in both the electrochemical properties and the materials development of organic anode materials.
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Affiliation(s)
- Aamod V. Desai
- EastChem School of ChemistryUniversity of St. AndrewsNorth HaughSt. AndrewsKY16 9STUnited Kingdom
- The Faraday InstitutionQuad One Harwell Science and Innovation CampusDidcotOX11 0RAUnited Kingdom
| | - Russell E. Morris
- EastChem School of ChemistryUniversity of St. AndrewsNorth HaughSt. AndrewsKY16 9STUnited Kingdom
- The Faraday InstitutionQuad One Harwell Science and Innovation CampusDidcotOX11 0RAUnited Kingdom
- Department of Physical and Macromolecular Chemistry, Faculty of ScienceCharles UniversityHlavova 8128 43Prague 2Czech Republic
| | - A. Robert Armstrong
- EastChem School of ChemistryUniversity of St. AndrewsNorth HaughSt. AndrewsKY16 9STUnited Kingdom
- The Faraday InstitutionQuad One Harwell Science and Innovation CampusDidcotOX11 0RAUnited Kingdom
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18
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Li BH, Ye XS. Recent advances in glycan synthesis. Curr Opin Chem Biol 2020; 58:20-27. [PMID: 32480314 DOI: 10.1016/j.cbpa.2020.04.009] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 04/04/2020] [Accepted: 04/13/2020] [Indexed: 12/29/2022]
Abstract
Carbohydrates play important roles in life science, but their synthesis is always hampered by their complicated chemical structures. Scientists have never stopped trying to solve the problem of glycan synthesis from various aspects. Here a brief overview of recent progress in glycan synthesis, including chemical approaches, chemoenzymatic approaches, and automated synthesis, will be discussed, focusing on the efficiency of new glycosylation methods, the stereoselectivity of coupled products, and their applications in the assembly of complex glycan chains.
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Affiliation(s)
- Bo-Han Li
- Institute of Systems Biomedicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing 100191, China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University Health Science Center, Beijing 100191, China.
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19
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Affiliation(s)
- Kabita Pradhan
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
| | - Suvarn S. Kulkarni
- Department of Chemistry Indian Institute of Technology Bombay 400076 Powai Mumbai India
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20
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Laborda P, Lyu Y, Parmeggiani F, Lu A, Wang W, Huang Y, Huang K, Guo J, Liu L, Flitsch SL, Voglmeir J. An Enzymatic N‐Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914338] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Pedro Laborda
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
- Current address: School of Life SciencesNantong University 19 Qixiu Road 226019 Nantong China
| | - Yong‐Mei Lyu
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Fabio Parmeggiani
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Ai‐Min Lu
- College of SciencesNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Wen‐Jiao Wang
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Ying‐Ying Huang
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Kun Huang
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Juan Guo
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Li Liu
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
| | - Sabine L. Flitsch
- School of Chemistry & Manchester Institute of BiotechnologyThe University of Manchester 131 Princess Street M1 7DN Manchester UK
| | - Josef Voglmeir
- Glycomics and Glycan Bioengineering Research Center (GGBRC)College of Food Science and TechnologyNanjing Agricultural University 1 Weigang 210095 Nanjing China
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21
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Laborda P, Lyu YM, Parmeggiani F, Lu AM, Wang WJ, Huang YY, Huang K, Guo J, Liu L, Flitsch SL, Voglmeir J. An Enzymatic N-Acylation Step Enables the Biocatalytic Synthesis of Unnatural Sialosides. Angew Chem Int Ed Engl 2020; 59:5308-5311. [PMID: 31834658 DOI: 10.1002/anie.201914338] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2019] [Revised: 12/10/2019] [Indexed: 12/22/2022]
Abstract
Chitin is one of the most abundant and cheaply available biopolymers in Nature. Chitin has become a valuable starting material for many biotechnological products through manipulation of its N-acetyl functionality, which can be cleaved under mild conditions using the enzyme family of de-N-acetylases. However, the chemoselective enzymatic re-acylation of glucosamine derivatives, which can introduce new stable functionalities into chitin derivatives, is much less explored. Herein we describe an acylase (CmCDA from Cyclobacterium marinum) that catalyzes the N-acylation of glycosamine with a range of carboxylic acids under physiological reaction conditions. This biocatalyst closes an important gap in allowing the conversion of chitin into complex glycosides, such as C5-modified sialosides, through the use of highly selective enzyme cascades.
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Affiliation(s)
- Pedro Laborda
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China.,Current address: School of Life Sciences, Nantong University, 19 Qixiu Road, 226019, Nantong, China
| | - Yong-Mei Lyu
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Fabio Parmeggiani
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Ai-Min Lu
- College of Sciences, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Wen-Jiao Wang
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Ying-Ying Huang
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Kun Huang
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Juan Guo
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Li Liu
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
| | - Sabine L Flitsch
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, M1 7DN, Manchester, UK
| | - Josef Voglmeir
- Glycomics and Glycan Bioengineering Research Center (GGBRC), College of Food Science and Technology, Nanjing Agricultural University, 1 Weigang, 210095, Nanjing, China
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22
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McArthur JB, Santra A, Li W, Kooner AS, Liu Z, Yu H, Chen X. L. pneumophila CMP-5,7-di-N-acetyllegionaminic acid synthetase (LpCLS)-involved chemoenzymatic synthesis of sialosides and analogues. Org Biomol Chem 2020; 18:738-744. [PMID: 31912849 DOI: 10.1039/c9ob02476j] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
5,7-Di-N-acetyllegionaminic acid (Leg5,7Ac2) is a bacterial nonulosonic acid (NulO) analogue of sialic acids, an important class of monosaccharides in mammals and in some bacteria. To develop efficient one-pot multienzyme (OPME) glycosylation systems for synthesizing Leg5,7Ac2-glycosides, Legionella pneumophila cytidine 5'-monophosphate (CMP)-Leg5,7Ac2 synthetase (LpCLS) was cloned and characterized. It was successfully used in producing Leg5,7Ac2-glycosides from chemoenzymatically synthesized Leg5,7Ac2 using a one-pot two-enzyme system or from its chemically synthesized six-carbon monosaccharide precursor 2,4-diacetamido-2,4,6-trideoxymannose (6deoxyMan2,4diNAc) in a one-pot three-enzyme system. In addition, LpCLS was shown to tolerate Neu5Ac7NAc, a C9-hydroxyl analogue of Leg5,7Ac2 and also a stable analogue of 7-O-acetylneuraminic acid (Neu5,7Ac2), to allow OPME synthesis of the corresponding α2-3-linked sialosides, from chemically synthesized six-carbon monosaccharide precursor 4-N-acetyl-4-deoxy-N-acetylmannosamine (ManNAc7NAc).
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Affiliation(s)
- John B McArthur
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Abhishek Santra
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Wanqing Li
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Anoopjit S Kooner
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Ziqi Liu
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Hai Yu
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
| | - Xi Chen
- Department of Chemistry, University of California, One Shields Avenue, Davis, CA 95616, USA.
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23
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Friebe C, Lex‐Balducci A, Schubert US. Sustainable Energy Storage: Recent Trends and Developments toward Fully Organic Batteries. CHEMSUSCHEM 2019; 12:4093-4115. [PMID: 31297974 PMCID: PMC6790600 DOI: 10.1002/cssc.201901545] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2019] [Revised: 07/04/2019] [Indexed: 05/12/2023]
Abstract
In times of spreading mobile devices, organic batteries represent a promising approach to replace the well-established lithium-ion technology to fulfill the growing demand for small, flexible, safe, as well as sustainable energy storage solutions. In the last years, large efforts have been made regarding the investigation and development of batteries that use organic active materials since they feature superior properties compared to metal-based, in particular lithium-based, energy-storage systems in terms of flexibility and safety as well as with regard to resource availability and disposal. This Review compiles an overview over the most recent studies on the topic. It focuses on the different types of applied active materials, covering both known systems that are optimized and novel structures that aim at being established.
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Affiliation(s)
- Christian Friebe
- Laboratory of Organic and Macromolecular Chemistry (IOMC)Friedrich Schiller University JenaHumboldtstraße 1007743JenaGermany
- Center for Energy and Environmental Chemistry Jena (CEEC Jena)Friedrich Schiller University JenaPhilosophenweg 7a07743JenaGermany
| | - Alexandra Lex‐Balducci
- Laboratory of Organic and Macromolecular Chemistry (IOMC)Friedrich Schiller University JenaHumboldtstraße 1007743JenaGermany
- Center for Energy and Environmental Chemistry Jena (CEEC Jena)Friedrich Schiller University JenaPhilosophenweg 7a07743JenaGermany
| | - Ulrich S. Schubert
- Laboratory of Organic and Macromolecular Chemistry (IOMC)Friedrich Schiller University JenaHumboldtstraße 1007743JenaGermany
- Center for Energy and Environmental Chemistry Jena (CEEC Jena)Friedrich Schiller University JenaPhilosophenweg 7a07743JenaGermany
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24
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Gintner M, Yoneda Y, Schmölzer C, Denner C, Kählig H, Schmid W. A versatile de novo synthesis of legionaminic acid and 4-epi-legionaminic acid starting from d-serine. Carbohydr Res 2019; 474:34-42. [PMID: 30711766 DOI: 10.1016/j.carres.2019.01.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 01/18/2019] [Accepted: 01/18/2019] [Indexed: 01/17/2023]
Abstract
Legionaminic acid and 4-epi-legionaminic acid are 5,7-diacetamido nonulosonic acids and are assumed to play a crucial role in the virulence of Legionella pneumophila, the causative agent of Legionnaires' disease. Moreover, they are ideal target motifs for the development of vaccines and pathogen detection. Herein, we present a versatile de novo synthesis of legionaminic acid and 4-epi-legionaminic acid. Starting from simple d-serine, the C9-backbone is built up by two CC-bond formation reactions. First, the protected d-serine motif is elongated utilizing a highly stereoselective nitroaldol reaction to give a C6-precursor of desired d-rhamno configuration. Second, an indium-mediated allylation is employed to further elongate the carbon backbone and introduce a masked α-keto acid function.
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Affiliation(s)
- Manuel Gintner
- AG Schmid, Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, A-1090, Vienna, Austria.
| | - Yuko Yoneda
- Facultiy of Agriculture, Shizuoka University, 836, Ohya, Shizuoka, Japan
| | - Christoph Schmölzer
- AG Schmid, Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, A-1090, Vienna, Austria
| | - Christian Denner
- AG Schmid, Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, A-1090, Vienna, Austria
| | - Hanspeter Kählig
- AG Schmid, Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, A-1090, Vienna, Austria
| | - Walther Schmid
- AG Schmid, Institute of Organic Chemistry, University of Vienna, Währinger Straße 38, A-1090, Vienna, Austria
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25
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Li W, McArthur JB, Chen X. Strategies for chemoenzymatic synthesis of carbohydrates. Carbohydr Res 2018; 472:86-97. [PMID: 30529493 DOI: 10.1016/j.carres.2018.11.014] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Revised: 11/22/2018] [Accepted: 11/23/2018] [Indexed: 12/30/2022]
Abstract
Carbohydrates are structurally complex but functionally important biomolecules. Therefore, they have been challenging but attractive synthetic targets. While substantial progress has been made on advancing chemical glycosylation methods, incorporating enzymes into carbohydrate synthetic schemes has become increasingly practical as more carbohydrate biosynthetic and metabolic enzymes as well as their mutants with synthetic application are identified and expressed for preparative and large-scale synthesis. Chemoenzymatic strategies that integrate the flexibility of chemical derivatization with enzyme-catalyzed reactions have been extremely powerful. Briefly summarized here are our experiences on developing one-pot multienzyme (OPME) systems and representative chemoenzymatic strategies from others using glycosyltransferase-catalyzed reactions for synthesizing diverse structures of oligosaccharides, polysaccharides, and glycoconjugates. These strategies allow the synthesis of complex carbohydrates including those containing naturally occurring carbohydrate postglycosylational modifications (PGMs) and non-natural functional groups. By combining these srategies with facile purification schemes, synthetic access to the diverse space of carbohydrate structures can be automated and will not be limited to specialists.
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Affiliation(s)
- Wanqing Li
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - John B McArthur
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Xi Chen
- Department of Chemistry, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA.
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26
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Dhakal B, Crich D. Synthesis and Stereocontrolled Equatorially Selective Glycosylation Reactions of a Pseudaminic Acid Donor: Importance of the Side-Chain Conformation and Regioselective Reduction of Azide Protecting Groups. J Am Chem Soc 2018; 140:15008-15015. [PMID: 30351022 DOI: 10.1021/jacs.8b09654] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Pseudaminic acid is an amino deoxy sialic acid whose glycosides are essential components of many pathogenic Gram-negative bacterial cell walls including those from Pseudomonas aeruginosa, Vibrio cholerae, Campylobacter jejuni, Campylobacter coli, Vibrio vulnificus, and Pseudoalteromonas distincta. The study of pseudaminic acid glycosides is however hampered by poor availability from nature and the paucity of good synthetic methods and limited to no understanding of the factors controlling stereoselectivity. Conformational analysis of the side chains of various stereoisomeric sialic acids suggested that the side chain of pseudaminic acid would take up the most electron-withdrawing trans, gauche-conformation, as opposed to the gauche, gauche conformation of N-acetyl neuraminic acid and the gauche, trans-conformtion of 7- epi N-acetyl neuraminic acid, leading to the prediction of high equatorial selectivity. This prediction is borne out by the synthesis of a suitably protected pseudaminic acid donor from N-acetyl neuraminic acid in 20 steps and 5% overall yield and by the exquisite equatorial selectivity it displays in coupling reactions with typical glycosyl acceptors. The selectivity of the glycosylation reactions is further buttressed by the development and implementation of conditions for the regioselective release of the two amines from the corresponding azides, such as required for the preparation of the lipopolysaccharides. These findings open the way to the synthesis and study of pseudaminic acid-based bacterial lipopolysaccharides and, importantly in the broader context of glycosylation reactions in general, underline the significant role played by side-chain conformation in the control of reactivity and selectivity.
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Affiliation(s)
- Bibek Dhakal
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - David Crich
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
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Carter JR, Kiefel MJ. A new approach to the synthesis of legionaminic acid analogues. RSC Adv 2018; 8:35768-35775. [PMID: 35547932 PMCID: PMC9088180 DOI: 10.1039/c8ra07771a] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Accepted: 10/15/2018] [Indexed: 11/21/2022] Open
Abstract
Legionaminic acid is a member of the nonulosonic acids, which are a class of sugars considered to be a virulence factor within a wide variety of pathogenic bacteria. We have developed a synthetic pathway towards C-7 analogues of legionaminic acid starting from Neu5Ac, resulting in the complete synthesis of both legionaminic acid, and its C-7 epimer, from a common precurser. Our approach involves the late-stage introduction of the requisite C-7 nitrogen functionality, thus making our strategy amenable to the introduction of a range of different amide groups at C-7 of legionaminic acid. We report the synthesis of the bacterial nonulosonic acid legionaminic acid, together with its C-7 epimer, from a common precursor derived from N-acetylneuraminic acid.![]()
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Affiliation(s)
- James R. Carter
- Institute for Glycomics
- Griffith University Gold Coast Campus
- Australia
| | - Milton J. Kiefel
- Institute for Glycomics
- Griffith University Gold Coast Campus
- Australia
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