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Park S, Lee J, Kim JH, Jeong Y, Lee S, Lee SW, Kim S. Evolution of a Strategy for Concise Enantioselective Total Synthesis of the Salinosporamide Family of Natural Products. Angew Chem Int Ed Engl 2022; 61:e202210317. [DOI: 10.1002/anie.202210317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Soojun Park
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
| | - Jiwoo Lee
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
| | - Jae Hyun Kim
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
- College of Pharmacy Chung-Ang University 84, Heukseok-ro Seoul 06974 Republic of Korea
| | - Yeji Jeong
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
| | - Seokwoo Lee
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
| | - Su Won Lee
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
| | - Sanghee Kim
- College of Pharmacy Seoul National University 1 Gwanak-ro, Gwanak-gu Seoul 08826 Republic of Korea
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2
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Park S, Lee J, Kim JH, Jeong Y, Lee S, Lee SW, Kim S. Evolution of a Strategy for Concise Enantioselective Total Synthesis of the Salinosporamide Family of Natural Products. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202210317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Soojun Park
- Seoul National University College of Pharmacy Pharmacy KOREA, REPUBLIC OF
| | - Jiwoo Lee
- Seoul National University College of Pharmacy Pharmacy KOREA, REPUBLIC OF
| | - Jae Hyun Kim
- Chung-Ang University - Seoul Campus: Chung-Ang University Pharmacy KOREA, REPUBLIC OF
| | - Yeji Jeong
- Seoul National University College of Pharmacy Pharmacy KOREA, REPUBLIC OF
| | - Seokwoo Lee
- Seoul National University College of Pharmacy Pharmacy KOREA, REPUBLIC OF
| | - Su Won Lee
- Seoul National University College of Pharmacy Pharmacy KOREA, REPUBLIC OF
| | - Sanghee Kim
- Seoul National University College of Pharmacy 1 Gwanak-ro, Gwanak-gu 08826 Seoul KOREA, REPUBLIC OF
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Taber DF. Natural Product Synthesis by Intramolecular Alkylidene Carbene C−H Insertion. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200032] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Douglass F. Taber
- Department of Chemistry and Biochemistry University of Delaware Newark DE 19716 USA
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Empel C, Pei C, He F, Jana S, Koenigs RM. Proton or Carbene Transfer? On the Dark and Light Reaction of Diazoalkanes with Alcohols. Chemistry 2022; 28:e202104397. [PMID: 35060651 PMCID: PMC9306865 DOI: 10.1002/chem.202104397] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Indexed: 12/23/2022]
Abstract
The formal alkylation reaction of OH groups with diazoalkanes under catalyst-free reaction conditions finds broad application in organic synthesis. However, even today, this reaction is mainly limited to the use of diazomethane as reaction partner. In this combined experimental and theoretical study, we aim at a fundamental understanding of the reaction of diazoalkanes with alcohols to make this transformation amenable to a generalized approach towards formal alkylation reactions of alcohols with diazoalkanes. Experimental and theoretical studies suggest a direct proton transfer only in exceptional cases. In a more general setting, such O-H functionalization proceed both under dark and photochemical conditions via a key hydrogen-bonded singlet carbene intermediate that undergoes a protonation-addition mechanism. We conclude with applications of this approach in O-H functionalization reactions of alcohols, including simple fluorinated, halogenated and aliphatic alcohols and showcase functional-group tolerance of this method in the reaction of biologically active and pharmaceutically relevant alcohols.
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Affiliation(s)
- Claire Empel
- RWTH Aachen University, Institute of Organic Chemistry, Landoltweg 1, D-52074, Aachen, Germany
| | - Chao Pei
- RWTH Aachen University, Institute of Organic Chemistry, Landoltweg 1, D-52074, Aachen, Germany
| | - Feifei He
- RWTH Aachen University, Institute of Organic Chemistry, Landoltweg 1, D-52074, Aachen, Germany
| | - Sripati Jana
- RWTH Aachen University, Institute of Organic Chemistry, Landoltweg 1, D-52074, Aachen, Germany
| | - Rene M Koenigs
- RWTH Aachen University, Institute of Organic Chemistry, Landoltweg 1, D-52074, Aachen, Germany
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Gene Cluster Analysis of Marine Bacteria Seeking for Natural Anticancer Products. Jundishapur J Nat Pharm Prod 2021. [DOI: 10.5812/jjnpp.104665] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Background: In the past decade, metabolites of marine microorganisms have been increasingly used for their various biological activities. An intense effort has been dedicated to assessing the therapeutic efficacy of the marine natural products and metabolites obtained from marine bacteria in cancer therapy. Fast and reliable analytical bacterial genome sequencing provides specialized bioinformatic tools to identify potential gene clusters in bacteria for obtaining secondary metabolites. Objectives: This study aimed to analyze the genome sequences of marine bacteria to recognize bioactive compounds with anti-cancer properties. Methods: Marine bacteria with the genomic sequences registered in the National Center for Biotechnology Information (NCBI) genome database were used in this study. The genome was analyzed for proteins, tRNAs, and rRNAs from GenBank entries by Feature Extract 1.2L Server. The Anti-SMASH webserver was used for the analysis of unique marine bacterial metabolites of the marine bacterial genome, available from the NCBI database. Results: A number of marine bacterial species, including Salinispora arenicola, Salinispora tropica, Crocosphaera watsonii, and Blastopirellula marina encoded metabolites belonging to the polyketide and nonribosomal peptide (NRP) families, showing anti-cancer properties. Among the marine species described, S. tropica and S. arenicola are richer in the genes encoding polyketide and NRP with potential antitumor activities. Conclusions: Marine bacteria are an excellent and exceptional source of anti-cancer compounds. In silico genome analysis of marine bacteria provided an opportunity to evaluate gene clusters for known natural products. Like this chemical engineering approaches for pharmaceutical application are useful in clinical evaluation of cancer treatment.
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Jia T, Zeng G, Zhang C, Zeng L, Zheng W, Li S, Wu K, Shao J, Zhang J, Zhu H. The reaction of prop-2-ynylsulfonium salts and sulfonyl-protected β-amino ketones to epoxide-fused 2-methylenepyrrolidines and S-containing pyrroles. Chem Commun (Camb) 2021; 57:2657-2660. [PMID: 33587730 DOI: 10.1039/d0cc07745c] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A novel divergent domino annulation reaction of prop-2-ynylsulfonium salts with sulfonyl-protected β-amino ketones has been developed, affording various epoxide-fused 2-methylenepyrrolidines and S-containing pyrroles in moderate to excellent yields. Prop-2-ynylsulfonium salts act as C2 synthons in the reactions providing a promising epoxide-fused skeleton in a single operation with readily accessible starting materials.
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Affiliation(s)
- Tingting Jia
- School of Medicine, Zhejiang University City College, Hangzhou, 310015, P. R. China.
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Hubbell GE, Tepe JJ. Natural product scaffolds as inspiration for the design and synthesis of 20S human proteasome inhibitors. RSC Chem Biol 2020; 1:305-332. [PMID: 33791679 PMCID: PMC8009326 DOI: 10.1039/d0cb00111b] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 09/01/2020] [Indexed: 12/13/2022] Open
Abstract
The 20S proteasome is a valuable target for the treatment of a number of diseases including cancer, neurodegenerative disease, and parasitic infection. In an effort to discover novel inhibitors of the 20S proteasome, many reseaarchers have looked to natural products as potential leads for drug discovery. The following review discusses the efforts made in the field to isolate and identify natural products as inhibitors of the proteasome. In addition, we describe some of the modifications made to natural products in order to discover more potent and selective inhibitors for potential disease treatment.
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Affiliation(s)
- Grace E. Hubbell
- Department of Chemistry, Michigan State UniversityEast LansingMI 48823USA
| | - Jetze J. Tepe
- Department of Chemistry, Michigan State UniversityEast LansingMI 48823USA
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Highlights of marine natural products having parallel scaffolds found from marine-derived bacteria, sponges, and tunicates. J Antibiot (Tokyo) 2020; 73:504-525. [PMID: 32507851 PMCID: PMC7276339 DOI: 10.1038/s41429-020-0330-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 05/16/2020] [Accepted: 05/18/2020] [Indexed: 12/11/2022]
Abstract
Marine-derived bacteria are a prolific source of a wide range of structurally diverse natural products. This review, dedicated to Professor William Fenical, begins by showcasing many seminal discoveries made at the University of California San Diego from marine-derived actinomycetes. Discussed early on is the 20-year journey of discovery and advancement of the seminal actinomycetes natural product salinosporamide A into Phase III anticancer clinical trials. There are many fascinating parallels discussed that were gleaned from the comparative literature of marine sponge, tunicate, and bacteria-derived natural products. Identifying bacterial biosynthetic machinery housed in sponge and tunicate holobionts through both culture-independent and culture-dependent approaches is another important and expanding subject that is analyzed. Work reviewed herein also evaluates the hypotheses that many marine invertebrate-derived natural products are biosynthesised by associated or symbiotic bacteria. The insights and outcomes from metagenomic sequencing and synthetic biology to expand molecule discovery continue to provide exciting outcomes and they are predicted to be the source of the next generation of novel marine natural product chemical scaffolds.
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Chen FJ, Lin Y, Xu M, Xia Y, Wink DJ, Lee D. C-H Insertion by Alkylidene Carbenes To Form 1,2,3-Triazines and Anionic [3 + 2] Dipolar Cycloadditions To Form Tetrazoles: Crucial Roles of Stereoelectronic and Steric Effects. Org Lett 2020; 22:718-723. [PMID: 31909625 DOI: 10.1021/acs.orglett.9b04548] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The synthesis of 1,2,3-triazines and bicyclic tetrazoles from α-azido ketones is described. The common intermediate generated from lithiated trimethylsilyldiazomethane and α-azido ketones diverges depending on the steric bulk of the substituents. The formation of 1,2,3-triazines via a C-H insertion of alkylidene carbene to form 3-azidocyclopropene, followed by its rearrangement, is supported by density functional theory calculations. Tetrazole formation proceeds via a facile anionic [3 + 2] dipolar cycloaddition between a lithiated diazo moiety and an azido group facilitated by the chelation of a lithium ion.
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Affiliation(s)
- Fa-Jie Chen
- Department of Chemistry , University of Illinois at Chicago , 845 West Taylor Street , Chicago , Illinois 60607 , United States
| | - Yongjia Lin
- College of Chemistry and Materials Engineering , Wenzhou University , Wenzhou , Zhejiang Province 325035 , P. R. China
| | - Man Xu
- College of Chemistry and Materials Engineering , Wenzhou University , Wenzhou , Zhejiang Province 325035 , P. R. China
| | - Yuanzhi Xia
- College of Chemistry and Materials Engineering , Wenzhou University , Wenzhou , Zhejiang Province 325035 , P. R. China
| | - Donald J Wink
- Department of Chemistry , University of Illinois at Chicago , 845 West Taylor Street , Chicago , Illinois 60607 , United States
| | - Daesung Lee
- Department of Chemistry , University of Illinois at Chicago , 845 West Taylor Street , Chicago , Illinois 60607 , United States
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Liu YW, Mao ZY, Nie XD, Si CM, Wei BG, Lin GQ. Approach to Tertiary-Type β-Hydroxyl Carboxamides Through Sc(OTf)3-Catalyzed Addition of Ynamides and Ketones. J Org Chem 2019; 84:16254-16261. [DOI: 10.1021/acs.joc.9b02854] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Yi-Wen Liu
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 220 Handan Road, Shanghai 200433, China
| | - Zhuo-Ya Mao
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 220 Handan Road, Shanghai 200433, China
| | - Xiao-Di Nie
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 220 Handan Road, Shanghai 200433, China
| | - Chang-Mei Si
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 220 Handan Road, Shanghai 200433, China
| | - Bang-Guo Wei
- Institutes of Biomedical Sciences and School of Pharmacy, Fudan University, 220 Handan Road, Shanghai 200433, China
| | - Guo-Qiang Lin
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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