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Saha J, Banerjee S, Malo S, Bankura A, Ghosh A, Das AK. Visible Light-Induced Regioselective E to Z Isomerization of Polarized 1,3-Dienes: Experimental and Theoretical Insights. J Org Chem 2024; 89:15964-15971. [PMID: 39404650 DOI: 10.1021/acs.joc.4c02216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2024]
Abstract
The stereocontrol of E → Z isomerization on a (1E,3E)-diene, instead of a simple alkene, can be more challenging due to the increased number of isomerization possibilities. Herein, we report visible light-mediated regioselective (1E,3E → 1E,3Z) isomerization of (1E,3E)-diene. The reaction conditions are mild and easy to apply and can be applied to a wide range of substances, with an excellent yield and selectivity (90:10). It is evident from the crystal structures that the cause of regioselectivity for the isomerization of 1,3-diene may not be limited to 1,3-allylic strains; CH-π interaction may also play a vital role. Computational studies suggest that this regioselective photoisomerization is a thermodynamically feasible process and requires the accumulation of spin density on the modified double bond for the transformation to occur.
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Affiliation(s)
- Jayanta Saha
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, Kolkata 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Soumadip Banerjee
- School of Mathematical and Computational Sciences, Indian Association for the Cultivation of Science Jadavpur, Kolkata 700032, India
| | - Sidhartha Malo
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, Kolkata 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Abhijit Bankura
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, Kolkata 700032, India
| | - Avik Ghosh
- School of Mathematical and Computational Sciences, Indian Association for the Cultivation of Science Jadavpur, Kolkata 700032, India
| | - Abhijit K Das
- School of Mathematical and Computational Sciences, Indian Association for the Cultivation of Science Jadavpur, Kolkata 700032, India
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Guo H, Kirchhoff JL, Strohmann C, Grabe B, Loh CCJ. Asymmetric Pd/Organoboron-Catalyzed Site-Selective Carbohydrate Functionalization with Alkoxyallenes Involving Noncovalent Stereocontrol. Angew Chem Int Ed Engl 2024; 63:e202400912. [PMID: 38530140 DOI: 10.1002/anie.202400912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 03/19/2024] [Accepted: 03/20/2024] [Indexed: 03/27/2024]
Abstract
Herein, we demonstrate the robustness of a synergistic chiral Pd/organoboron system in tackling a challenging suite of site-, regio-, enantio- and diastereoselectivity issues across a considerable palette of biologically relevant carbohydrate polyols, when prochiral alkoxyallenes were employed as electrophiles. In view of the burgeoning role of noncovalent interactions (NCIs) in stereoselective carbohydrate synthesis, our mechanistic experiments and DFT modeling of the reaction path unexpectedly revealed that NCIs such as hydrogen bonding and CH-π interactions between the resting states of the Pd-π-allyl complex and the borinate saccharide are critically involved in the stereoselectivity control. Our strategy thus illuminates the untapped potential of harnessing NCIs in the context of transition metal catalysis to tackle stereoselectivity challenges in carbohydrate functionalization.
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Affiliation(s)
- Hao Guo
- Abteilung Chemische Biologie, Max Planck Institut für Molekulare Physiologie, Otto-Hahn-Straße 11, 44227, Dortmund, Germany
- Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
| | - Jan-Lukas Kirchhoff
- Technische Universität Dortmund, Fakultät für Chemie und Chemische Biologie Anorganische Chemie, Otto-Hahn-Straße 6, 44227, Dortmund, Germany
| | - Carsten Strohmann
- Technische Universität Dortmund, Fakultät für Chemie und Chemische Biologie Anorganische Chemie, Otto-Hahn-Straße 6, 44227, Dortmund, Germany
| | - Bastian Grabe
- NMR Department Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
| | - Charles C J Loh
- Abteilung Chemische Biologie, Max Planck Institut für Molekulare Physiologie, Otto-Hahn-Straße 11, 44227, Dortmund, Germany
- Fakultät für Chemie und Chemische Biologie, Technische Universität Dortmund, Otto-Hahn-Straße 4a, 44227, Dortmund, Germany
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Agrawal S, Rai S, Mahato P, Ali A, Mukherjee S. Assemble-Disassemble-Reassemble Dynamics in Copper Nanocluster-Based Superstructures. J Phys Chem Lett 2024:4880-4889. [PMID: 38682648 DOI: 10.1021/acs.jpclett.4c00755] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2024]
Abstract
Assembling metal nanoclusters (MNCs) to form superstructures generates exciting photophysical properties distinct from those of their discrete precursors. Controlling the assembly process of MNCs and understanding the assembly-disassembly dynamics can have implications in achieving the reversible self-assembly of MNCs. The formation of self-assembled copper nanoclusters (CuNCs) as homogeneous superstructures and the underlying mechanisms governing such a process remain unexplored. Smart molecular imprinting of surface ligands can establish the forces necessary for the formation of such superstructures. Herein, we report highly luminescent, ordered superstructures of 4-phenylimidazole-2-thiol (4-PIT)-protected CuNCs with the help of l-ascorbic acid as a secondary ligand. Through a comprehensive spectroscopic analysis, we deciphered the mechanism of the self-assembly process, where the role of interligand H-bonding and C-H-π interactions was established. Notably, efficient reversibility of assembly-disassembly was demonstrated by re-establishing the interligand interactions and regenerating their photophysical and morphological signatures.
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Yeung A, Zwijnenburg MA, Orton GRF, Robertson JH, Barendt TA. Investigating the diastereoselective synthesis of a macrocycle under Curtin-Hammett control. Chem Sci 2024; 15:5516-5524. [PMID: 38638241 PMCID: PMC11023033 DOI: 10.1039/d3sc05715a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 03/04/2024] [Indexed: 04/20/2024] Open
Abstract
This work sheds new light on the stereoselective synthesis of chiral macrocycles containing twisted aromatic units, valuable π-conjugated materials for recognition, sensing, and optoelectronics. For the first time, we use the Curtin-Hammett principle to investigate a chiral macrocyclisation reaction, revealing the potential for supramolecular π-π interactions to direct the outcome of a dynamic kinetic resolution, favouring the opposite macrocyclic product to that expected under reversible, thermodynamically controlled conditions. Specifically, a dynamic, racemic perylene diimide dye (1 : 1 P : M) is strapped with an enantiopure (S)-1,1'-bi-2-naphthol group (P-BINOL) to form two diastereomeric macrocyclic products, the homochiral macrocycle (PP) and the heterochiral species (PM). We find there is notable selectivity for the PM macrocycle (dr = 4 : 1), which is rationalised by kinetic templation from intramolecular aromatic non-covalent interactions between the P-BINOL π-donor and the M-PDI π-acceptor during the macrocyclisation reaction.
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Affiliation(s)
- Angus Yeung
- School of Chemistry, University of Birmingham Edgbaston Birmingham B15 2TT UK
| | - Martijn A Zwijnenburg
- Department of Chemistry, University College London 20 Gordon Street London WC1H 0AJ UK
| | - Georgia R F Orton
- School of Chemistry, University of Birmingham Edgbaston Birmingham B15 2TT UK
| | | | - Timothy A Barendt
- School of Chemistry, University of Birmingham Edgbaston Birmingham B15 2TT UK
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Mallick RK, Žabka M, Clayden J. Benzo-fused Nitrogen Heterocycles by Asymmetric Ring Expansion and Stereochemically Retentive Re-contraction of Cyclic Ureas. Angew Chem Int Ed Engl 2024; 63:e202318417. [PMID: 38261257 DOI: 10.1002/anie.202318417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Revised: 01/12/2024] [Accepted: 01/22/2024] [Indexed: 01/24/2024]
Abstract
Benzo-fused nitrogen heterocycles are common features of bioactive molecules, and the enantioselective synthesis of their substituted analogues is an important goal. In this paper we demonstrate a practical and mechanistically intriguing approach to the enantioselective synthesis of 1-arylbenzazepines and their analogues. The reaction sequence starts with an asymmetric migratory ring expansion of indoline, tetrahydroquinoline, or tetrahydrobenzazepine ureas on treatment with a chiral lithium amide base. Treatment of the ring-expanded ureas with acid triggers a two-atom ring contraction-an 'azatropic shift' in which one urea nitrogen displaces the other-with almost complete retention of stereochemistry. Aminolysis of the urea products provides enantioenriched 1-aryl-tetrahydrobenzazepine derivatives and their congeners, including an analogue of an intermediate in the synthesis of the drug solifenacin. Deuteration, in situ IR, and DFT studies provide evidence for the mechanisms of the reaction steps.
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Affiliation(s)
- Rajendra K Mallick
- School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK
| | - Matej Žabka
- School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK
| | - Jonathan Clayden
- School of Chemistry, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK
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Gramüller J, Gschwind RM. An NMR Spectroscopy View on London Dispersion in Catalysis: Detection, Quantification, and Application in Ion Pair and Transition Metal Catalysis. Acc Chem Res 2023; 56:2968-2979. [PMID: 37889132 DOI: 10.1021/acs.accounts.3c00431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2023]
Abstract
ConspectusThe energetic contribution of London dispersion (LD) can cover a broad range from very few to hundreds of kJ mol-1 for extended interaction interfaces due to its pairwise additivity. However, for a designed and successful application of LD in chemical catalysis, there are still many obstacles and questions that remain. In principle, LD can be regarded as the attractive part of the van der Waals potential. Thus, considering the whole van der Waals potential, including the repulsive part (steric repulsion), the ideal solution to the problem in catalysis would be to design compatible interaction interfaces at exactly the correct distance. In the case of a self-assembled, flexible structure arrangement, entropic contributions and solvent interactions might be detrimental. In the case of a rigid catalyst pocket, steric hindrance might not allow for large substituents that are usually applied as dispersion energy donors (DEDs). For a working catalytic system, the following question arises: how is it possible to dissect the complex interaction interfaces in terms of energetic contributions? Usually, the energetic contribution of LD to catalysis is addressed by using calculations. However, adequately computing the correct energetic contributions can be extremely challenging for a vast conformational space with all kinds of intermolecular interactions. Thus, experimental data are essential for comparison or benchmarking.Therefore, in this Account, we describe our quest for detailed experimental data obtained via NMR spectroscopy to experimentally dissect and quantify LD in catalytic systems. In addition, we address the question of whether bulky substituents used as DEDs can be used in confined catalytic pockets. With the example of Pd phosphoramidite complexes, we show how it is possible to experimentally dissect and quantify the contribution of individual interaction areas in complicated transition metal complexes. Furthermore, a correlation between conformational rigidity and heterodimer preference clearly reveals that LD can only unfold its full potential in cases where entropic contributions are minimized. This finding can also explain the small contribution of LD in flexible and solvent-exposed molecular balances. In the field of Brønsted acid catalysis, we demonstrated that LD has a strong influence on the structures, stability, and populations of confined catalytic intermediates. LD is key for populating higher aggregates such as dimers. In addition, offsets between the experimental and computational results were observed and attributed to solvent-solute dispersion interactions. We studied the delicate interplay of attractive and repulsive interactions by adding bulky DED substituents onto a substrate, which can function as a molecular balance system. Intriguingly, the effect of LD on the free substrate was straightforwardly transferred onto the highly confined intermediates. Furthermore, this effect could even be read out in the enantioselectivities of the underlying reaction. This conceptualized a general approach regarding how LD can be used beneficially in catalysis to convert from moderate/good to excellent stereoselectivities. It showcased that bulky groups such as tert-butyl must not only be regarded as occupied volumes.
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Affiliation(s)
- Johannes Gramüller
- Institute of Organic Chemistry, University of Regensburg, Universitätsstraße 31, D-93053 Regensburg, Germany
| | - Ruth M Gschwind
- Institute of Organic Chemistry, University of Regensburg, Universitätsstraße 31, D-93053 Regensburg, Germany
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Zhao F, Han L, Liu T. Mechanistic insight into the ligand-controlled regioselective hydrocarboxylation of aryl olefins with palladium catalyst: a computational study. J Organomet Chem 2023. [DOI: 10.1016/j.jorganchem.2023.122645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
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A combined experimental and theoretical study to demonstrate the importance of V2O4 synthon in the crystal packing of an oxo-bridged dinuclear vanadium(V) complex with V2O4 core. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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