1
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Döring L, Winderl J, Kron M, Hubbuch J. Mechanistic modeling of minute virus of mice surrogate removal by anion exchange chromatography in micro scale. J Chromatogr A 2024; 1734:465261. [PMID: 39216284 DOI: 10.1016/j.chroma.2024.465261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Revised: 08/02/2024] [Accepted: 08/11/2024] [Indexed: 09/04/2024]
Abstract
Biopharmaceutical products are often produced in Chinese hamster ovary (CHO) cell cultures that are vulnerable to virus infections. Therefore, it is a regulatory requirement that downstream purification steps for biopharmaceuticals can remove viruses from feedstocks. Anion exchange chromatography (AEX) is one of the downstream unit operations that is most frequently used for this purpose and claimed for its capability to remove viruses. However, the impact of various process parameters on virus removal by AEX is still not fully understood. Mechanistic modeling could be a promising way to approach this gap, as these models require comparatively few experiments for calibration. This makes them a valuable tool to improve understanding of viral clearance, especially since virus spiking studies are costly and time consuming. In this study, we present how the virus clearance of a MVM mock virus particle by Q Sepharose FF resin can be described by mechanistic modeling. A lumped kinetic model was combined with a steric mass action model and calibrated at micro scale using three linear gradient experiments and an incremental step elution gradient. The model was subsequently verified for its capability to predict the effect of different sodium chloride concentrations, as well as residence times, on virus clearance and was in good agreement with the LRVs of the verification runs. Overall, models like this could enhance the mechanistic understanding of viral clearance mechanisms and thereby contribute to the development of more efficient and safer biopharmaceutical downstream processes.
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Affiliation(s)
- Lukas Döring
- Process Science, Rentschler Biopharma SE, Erwin-Rentschler-Str. 21 88471 Laupheim, Germany; Karlsruhe Institute of Technology (KIT), Institute of Engineering in Life Sciences, Section IV: Biomolecular Separation Engineering, Fritz-Haber-Weg 2 76131 Karlsruhe, Germany
| | - Johannes Winderl
- Process Science, Rentschler Biopharma SE, Erwin-Rentschler-Str. 21 88471 Laupheim, Germany
| | - Matthias Kron
- Process Science, Rentschler Biopharma SE, Erwin-Rentschler-Str. 21 88471 Laupheim, Germany
| | - Jürgen Hubbuch
- Karlsruhe Institute of Technology (KIT), Institute of Engineering in Life Sciences, Section IV: Biomolecular Separation Engineering, Fritz-Haber-Weg 2 76131 Karlsruhe, Germany.
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2
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Capito F, Wong TH, Faust C, Brand K, Dittrich W, Sommerfeld M, Tiwari G, Langer T. Improving Downstream Process Related Manufacturability Based on Protein Engineering-A Feasibility Study. Eng Life Sci 2024; 24:e202400019. [PMID: 39233725 PMCID: PMC11369322 DOI: 10.1002/elsc.202400019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 04/02/2024] [Accepted: 06/04/2024] [Indexed: 09/06/2024] Open
Abstract
While bioactivity and a favorable safety profile for biotherapeutics is of utmost importance, manufacturability is also worth of consideration to ease the manufacturing process. Manufacturability in the scientific literature is mostly related to stability of formulated drug substances, with limited focus on downstream process-related manufacturability, that is, how easily can a protein be purified. Process-related impurities or biological impurities like viruses and host cell proteins (HCP) are present in the harvest which have mostly acid isoelectric points and need to be removed to ensure patient safety. Therefore, during molecule design, the surface charge of the target molecule should preferably differ sufficiently from the surface charge of the impurities to enable an efficient purification strategy. In this feasibility study, we evaluated the possibility of improving manufacturability by adapting the surface charge of the target protein. We generated several variants of a GLP1-receptor-agonist-Fc-domain-FGF21-fusion protein and demonstrated proof of concept exemplarily for an anion exchange chromatography step which then can be operated at high pH values with maximal product recovery allowing removal of HCP and viruses. Altering the surface charge distribution of biotherapeutic proteins can thus be useful allowing for an efficient manufacturing process for removing HCP and viruses, thereby reducing manufacturing costs.
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Affiliation(s)
- Florian Capito
- Sanofi‐Aventis Deutschland GmbH, CMC Microbial Platform Downstream Process DevelopmentIndustriepark HöchstFrankfurt am MainGermany
| | - Ting Hin Wong
- Sanofi‐Aventis Deutschland GmbH, CMC Microbial Platform Downstream Process DevelopmentIndustriepark HöchstFrankfurt am MainGermany
- Technische Hochschule MittelhessenGießenGermany
| | - Christine Faust
- Sanofi‐Aventis Deutschland GmbH, Large Molecule ResearchIndustriepark HöchstFrankfurt am MainGermany
| | - Kilian Brand
- Sanofi‐Aventis Deutschland GmbH, CMC Microbial Platform Downstream Process DevelopmentIndustriepark HöchstFrankfurt am MainGermany
- Sanofi‐Aventis Deutschland GmbH, ICF API MIB FISIndustriepark HöchstFrankfurt am MainGermany
| | - Werner Dittrich
- Sanofi‐Aventis Deutschland GmbH, Large Molecule ResearchIndustriepark HöchstFrankfurt am MainGermany
| | - Mark Sommerfeld
- Sanofi‐Aventis Deutschland GmbH, Large Molecule ResearchIndustriepark HöchstFrankfurt am MainGermany
| | - Garima Tiwari
- Sanofi‐Aventis Deutschland GmbH, Large Molecule ResearchIndustriepark HöchstFrankfurt am MainGermany
| | - Thomas Langer
- Sanofi‐Aventis Deutschland GmbH, Large Molecule ResearchIndustriepark HöchstFrankfurt am MainGermany
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3
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Krause S, Capito F, Oeinck V, Flato H, Hoffmann H, Ötes O, Berg A. Understanding virus retention mechanisms on protein a chromatography based on using different wash buffers - Evaluating the possibility for a generic wash buffer toolbox to improve virus clearance capacity. BIOTECHNOLOGY NOTES (AMSTERDAM, NETHERLANDS) 2024; 5:50-57. [PMID: 39416690 PMCID: PMC11446380 DOI: 10.1016/j.biotno.2024.03.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 03/18/2024] [Accepted: 03/20/2024] [Indexed: 10/19/2024]
Abstract
During manufacturing of mammalian-cell derived monoclonal antibodies (mAbs) virus clearance capacity of the downstream process has to be demonstrated. The protein A chromatography step typically achieves less than 4 log10 and is not considered as a major contributing step. Having been successfully applied to host cell protein removal before, we used different wash buffers for three mAbs with two model viruses (Minute virus of mice and Murine leukemia virus) in series as well as separately to further understand major contributing interactions for virus retention and potentially design a generic toolbox of stringent wash buffers to be applied to various mAbs. Results indicate a major relevance of hydrophobic interaction for Murine leukemia virus (xMuLV) and mAb A, based on improved clearance for buffers additionally containing increased levels of hydrophobic compounds. This effect was less pronounced for Minute virus of mice (MVM), whereby hydrogen-bonds were expected to play a stronger role for this model virus. Additionally, electrostatic interactions presumably are more relevant for MVM retention compared to xMuLV under the conditions evaluated. A generic mAb and virus-independent stringent wash buffer toolbox could not be identified. However, based on our results a customized mAb and virus wash buffer design with improved virus clearance is possible, with here demonstrated log reduction increase by 1.3 log10 for MVM and 2.2 log10 for xMuLV for the protein A step compared to equilibration buffer alone.
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Affiliation(s)
- Sandra Krause
- Sanofi-Aventis Deutschland GmbH, R&D Biologics Development -Purification Development, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Florian Capito
- Sanofi-Aventis Deutschland GmbH, R&D Biologics Development -Purification Development, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Verena Oeinck
- Sanofi-Aventis Deutschland GmbH, R&D Biologics Development -Purification Development, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Hendrik Flato
- Sanofi-Aventis Deutschland GmbH, R&D Biologics Development -Purification Development, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Holger Hoffmann
- Sanofi-Aventis Deutschland GmbH, R&D Biologics Development -Purification Development, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Ozan Ötes
- Sanofi-Aventis Deutschland GmbH, R&D Microbial Platform Bioprocess Engineering, Industriepark Höchst, 65926, Frankfurt am Main, Germany
| | - Annette Berg
- Sanofi-Aventis Deutschland GmbH, R&D Microbial Platform Bioprocess Engineering, Industriepark Höchst, 65926, Frankfurt am Main, Germany
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4
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Cai K, Anderson J, Utiger E, Ferreira G. Viral clearance capability of monoclonal antibody purification. Biologicals 2024; 85:101751. [PMID: 38387156 DOI: 10.1016/j.biologicals.2024.101751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 02/12/2024] [Indexed: 02/24/2024] Open
Abstract
Viral clearance steps are routinely included in monoclonal antibody purification processes to safeguard product from potential virus contamination. These steps are often experimentally studied using product-specific feeds and parameters for each project to demonstrate viral clearance capability. However, published evidence suggests that viral clearance capability of many of these steps are not significantly impacted by variations in feed material or process parameter within commonly used ranges. The current investigation confirms robust retrovirus inactivation by low pH treatment and parvovirus removal by second-generation virus filters, independent to individual antibody molecules. Our results also reveal robust retrovirus removal by flowthrough anion exchange chromatography, inside the limits of protein load and host cell protein content. The cumulative viral clearance capability from these steps leads to an excess clearance safety factor of 10,000-fold for endogenous retrovirus-like particles. These results further justify the use of prior knowledge-based modular viral clearance estimation as opposed to repetitive experimentation.
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Affiliation(s)
- Kang Cai
- Purification Process and Analytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Gaithersburg, MD, 20878, USA.
| | - Jennifer Anderson
- Purification Process and Analytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Gaithersburg, MD, 20878, USA
| | - Etienne Utiger
- Purification Process and Analytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Gaithersburg, MD, 20878, USA
| | - Gisela Ferreira
- Purification Process and Analytical Sciences, Biopharmaceutical Development, R&D, AstraZeneca, Gaithersburg, MD, 20878, USA.
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5
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Gröner A. Integration of Planova filters in manufacturing processes of biologicals improve the virus safety effectively: A review of publicly available data. Biotechnol Prog 2024; 40:e3398. [PMID: 37985214 DOI: 10.1002/btpr.3398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 09/17/2023] [Accepted: 10/09/2023] [Indexed: 11/22/2023]
Abstract
The capacity to remove viruses by Planova filters produced by Asahi Kasei, primarily by small virus-retentive filters, were compiled from data in peer-reviewed publications and, partly, publicly available data from presentations at conferences (Planova workshops). Data from more than 100 publications and presentations at conferences covering Planova filters were assessed. The data were grouped according to the different virus filters regarding mean pore sizes and viruses of different sizes for plasma and cell culture derived products. Planova 15N and 20N filters removed parvoviruses below the limit of detection of viruses in the filtrate in approx. 50% of all studies and mean LRFs (log reduction factors) for viruses detected in the filtrate were above 4, demonstrating effective parvovirus reduction. Parvovirus removal capacity increased for Planova BioEX filters as well as for 2 Planova 20N in series. Large viruses as retroviruses (e.g., HIV and MuLV), herpesviruses, flaviviruses and togaviruses were removed effectively by Planova 15N, 20N and BioEX filters and also by Planova 35N filters. Flow interruption, transmembrane pressure, volume and protein concentration per filter area had had no substantial impact on virus removal capacity at manufacturing specification. In conclusion, the incorporation of Planova filters in manufacturing processes of biologicals remove, depending on the filter pore size, small and large viruses from the feed stream reliably. This virus reduction step with an orthogonal mechanism integrated in the manufacturing processes of biologicals, based primarily on size exclusion of viruses, improves the virus safety of these biopharmaceutical products considerably.
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6
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Billups M, Minervini M, Holstein M, Feroz H, Ranjan S, Hung J, Zydney AL. The role of intermolecular interactions on monoclonal antibody filtration through virus removal membranes. Biotechnol J 2023; 18:e2300265. [PMID: 37641433 DOI: 10.1002/biot.202300265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 07/31/2023] [Accepted: 08/23/2023] [Indexed: 08/31/2023]
Abstract
The removal of viruses by filtration is a critical unit operation to ensure the overall safety of monoclonal antibody (mAb) products. Many mAbs show very low filtrate flux during virus removal filtration, although there are still significant uncertainties regarding both the mechanisms and antibody properties that determine the filtration behavior. Experiments were performed with three highly purified mAbs through three different commercial virus filters (Viresolve Pro, Viresolve NFP, and Pegasus SV4) with different pore structures and chemistries. The flux decline observed during mAb filtration was largely reversible, even under conditions where the filtrate flux with the mAb was more than 100-fold smaller than the corresponding buffer flux. The extent of flux decline was highly correlated with the hydrodynamic diameter of the mAb as determined by dynamic light scattering (DLS). The mAb with the lowest filtrate flux for all three membranes showed the largest attractive intermolecular interactions and the greatest hydrophobicity, with the latter determined by binding to a butyl resin in an analytical hydrophobic interaction chromatography (HIC) column. These results strongly suggest that the flux behavior is dominated by reversible self-association of the mAbs, providing important insights into the design of more effective virus filtration processes and in the early identification of problematic mAbs/solution conditions.
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Affiliation(s)
- Matthew Billups
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - Mirko Minervini
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania, USA
| | - Melissa Holstein
- Bristol Myers Squibb, Biologics Process Development, Global Product Development and Supply, Devens, Massachusetts, USA
| | - Hasin Feroz
- Bristol Myers Squibb, Biologics Process Development, Global Product Development and Supply, Devens, Massachusetts, USA
| | - Swarnim Ranjan
- Bristol Myers Squibb, Biologics Process Development, Global Product Development and Supply, Devens, Massachusetts, USA
| | - Jessica Hung
- Bristol Myers Squibb, Biologics Process Development, Global Product Development and Supply, Devens, Massachusetts, USA
| | - Andrew L Zydney
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania, USA
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7
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Kozaili J, Shah A, Robbins D, Brinkman N, Burdick M, Strauss D. Serial virus filtration: A case study evaluating the product-dependent impact of control strategies on process efficiency. Biotechnol J 2023; 18:e2200599. [PMID: 37218550 DOI: 10.1002/biot.202200599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 04/26/2023] [Accepted: 05/17/2023] [Indexed: 05/24/2023]
Abstract
The production of biopharmaceutical products carries an inherent risk of contamination by adventitious viruses. Historically, these manufacturing processes have incorporated a dedicated virus filtration step to ensure product safety. However, challenging process conditions can lead to passage of small viruses to the permeate pool and an overall decrease in the desired virus logarithmic reduction value (LRV) for the process. The implementation of serial virus filtration has improved the robustness of such processes, albeit concerns about increased operating times and process complexity have limited its implementation. This work focused on optimizing a serial filtration process and identifying process control strategies to provide maximum efficiency while ensuring proper controls for process complexity. Constant TMP was identified as the optimal control strategy, which combined with the optimal filter ratio, resulted in a robust and faster virus filtration process. To demonstrate this hypothesis, data with two filters connected in series (1:1 filter ratio) are presented for a representative non-fouling molecule. Similarly, for a fouling product, the optimal setup was a combination of a filter connected in series to two filters operated in parallel (2:1 filter ratio). The optimized filter ratios bring cost- and time-savings benefits to the virus filtration step, thereby offering improved productivity. The results of risk and cost analyses performed as part of this study combined with the control strategy, offer companies a toolbox of strategies to accommodate products with different filterability profiles in their downstream processes. This work demonstrates that the safety advantages of performing filters in series can be achieved with minimal increases in time, cost, and risk.
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Affiliation(s)
- Julie Kozaili
- Science and Technology Research and Development, Asahi Kasei Bioprocess America Inc., Glenview, Illinois, USA
| | - Aesha Shah
- Horizon Therapeutics, Deerfield, Illinois, USA
| | - Donna Robbins
- Plasma Product Development, CSL Behring, Kankakee, Illinois, USA
| | - Nathan Brinkman
- Plasma Product Development, CSL Behring, Kankakee, Illinois, USA
| | - Michael Burdick
- Plasma Product Development, CSL Behring, Kankakee, Illinois, USA
| | - Daniel Strauss
- Science and Technology Research and Development, Asahi Kasei Bioprocess America Inc., Glenview, Illinois, USA
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8
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Suh D, Kim M, Lee C, Baek Y. Virus filtration in biopharmaceutical downstream processes: key factors and current limitations. SEPARATION & PURIFICATION REVIEWS 2022. [DOI: 10.1080/15422119.2022.2143379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Dongwoo Suh
- School of Chemical and Biological Engineering, College of Engineering, Institute of Chemical Process (ICP), Seoul National University (SNU), Gwanak-gu, Republic of Korea
| | - Mina Kim
- Department of Biotechnology, Institute of Basic Science, Sungshin Women’s University, Seoul, Republic of Korea
| | - Changha Lee
- School of Chemical and Biological Engineering, College of Engineering, Institute of Chemical Process (ICP), Seoul National University (SNU), Gwanak-gu, Republic of Korea
| | - Youngbin Baek
- Department of Biological Engineering, Inha University, Incheon, Republic of Korea
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9
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Johnson SA, Chen S, Bolton G, Chen Q, Lute S, Fisher J, Brorson K. Virus filtration: A Review of Current and Future Practices in Bioprocessing. Biotechnol Bioeng 2021; 119:743-761. [PMID: 34936091 DOI: 10.1002/bit.28017] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 12/01/2021] [Accepted: 12/02/2021] [Indexed: 11/06/2022]
Abstract
For drug products manufactured in mammalian cells, safety assurance practices are needed during production to assure that the final medicinal product is safe from the potential risk of viral contamination. Virus filters provide viral retention for a range of viruses through robust, largely size-based retention mechanism. Therefore, a virus filtration step is commonly utilized in a well-designed recombinant therapeutic protein purification process and is a key component in an overall strategy to minimize the risks of adventitious and endogenous viral particles during the manufacturing of biotechnology products. This review summarizes the history of virus filtration, currently available virus filters and prefilters, and virus filtration integrity test methods and study models. There is also discussion of current understanding and gaps with an eye toward future trends and emerging filtration technologies. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Sarah A Johnson
- Office of Biotechnology Products, CDER, FDA 10903 New Hampshire Ave., Silver Spring, Maryland, 20903
| | - Shuang Chen
- NGM Biopharmaceuticals Inc., 333 Oyster Point Blvd., South San Francisco, CA, 94080
| | - Glen Bolton
- Amgen Inc., 360 Binney Street, Cambridge, MA, 02142
| | - Qi Chen
- Genentech Inc. One DNA Way,, South San Francisco, CA, 94080
| | - Scott Lute
- Office of Biotechnology Products, CDER, FDA 10903 New Hampshire Ave., Silver Spring, Maryland, 20903
| | - John Fisher
- Genentech Inc. One DNA Way,, South San Francisco, CA, 94080
| | - Kurt Brorson
- Parexel International., 275 Grove Street Suite 101C, Newton, MA, 02466
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10
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Hong MS, Lu AE, Ou RW, Wolfrum JM, Springs SL, Sinskey AJ, Braatz RD. Model-based control for column-based continuous viral inactivation of biopharmaceuticals. Biotechnol Bioeng 2021; 118:3215-3224. [PMID: 34101159 DOI: 10.1002/bit.27846] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 04/15/2021] [Accepted: 05/30/2021] [Indexed: 11/08/2022]
Abstract
Batch low-pH hold is a common processing step to inactivate enveloped viruses for biologics derived from mammalian sources. Increased interest in the transition of biopharmaceutical manufacturing from batch to continuous operation resulted in numerous attempts to adapt batch low-pH hold to continuous processing. However, control challenges with operating this system have not been directly addressed. This article describes a low-cost, column-based continuous viral inactivation system constructed with off-the-shelf components. Model-based, reaction-invariant pH controller is implemented to account for the nonlinearities with Bayesian estimation addressing variations in the operation. The residence time distribution is modeled as a plug flow reactor with axial dispersion in series with a continuously stirred tank reactor, and is periodically estimated during operation through inverse tracer experiments. The estimated residence time distribution quantifies the minimum residence time, which is used to adjust feed flow rates. Controller validation experiments demonstrate that pH and minimum residence time setpoint tracking and disturbance rejection are achieved with fast and accurate response and no instability. Viral inactivation testing demonstrates tight control of logarithmic reduction values over extended operation. This study provides tools for the design and operation of continuous viral inactivation systems in service of increasing productivity, improving product quality, and enhancing patient safety.
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Affiliation(s)
- Moo Sun Hong
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Amos E Lu
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Rui Wen Ou
- Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Jacqueline M Wolfrum
- Center for Biomedical Innovation, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Stacy L Springs
- Center for Biomedical Innovation, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Anthony J Sinskey
- Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Richard D Braatz
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
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11
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Angelo JM, Potter K, Müller-Späth T, Xu X, Li ZJ, Ghose S. Continued insights into virus clearance validation across continuous capture chromatography. Biotechnol Bioeng 2021; 118:3604-3609. [PMID: 33421115 DOI: 10.1002/bit.27674] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 01/04/2021] [Indexed: 11/10/2022]
Abstract
Multi-column capture chromatography (MCC) has gained increased attention lately due to the significant economic and process-related advantages it offers compared to traditional batch mode chromatography. However, for wide adoption of this technology in the clinical and commercial space, it requires scalable models for viral validation. In this study, additional viral validation studies were conducted under cGLP guidelines to assess retro-(X-MuLV) and parvo-virus (minute virus of mice) clearance across twin-column continuous capture chromatography (CaptureSMB) to supplement work previously performed. A surrogate model was validated using standard batch mode chromatography equipment based on flow path modifications to mimic the loading strategy employed in CaptureSMB. In addition, aged resin was used in this surrogate format to assess the impact of resin lifetime on viral clearance during continuous capture operation. The impact of column loading was also explored to shed light on the viral clearance mechanisms of protein A chromatography in overloading conditions. The proposed approach greatly simplifies MCC virus validation studies, and provides a robust strategy for regulatory filing of continuous biomanufacturing processes.
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Affiliation(s)
- James M Angelo
- Biologics Development, Global Product Development and Supply, Bristol Myers Squibb Company, Devens, Massachusetts, USA
| | - Kevin Potter
- Biologics Development, Global Product Development and Supply, Bristol Myers Squibb Company, Devens, Massachusetts, USA
| | | | - Xuankuo Xu
- Biologics Development, Global Product Development and Supply, Bristol Myers Squibb Company, Devens, Massachusetts, USA
| | - Zheng Jian Li
- Biologics Development, Global Product Development and Supply, Bristol Myers Squibb Company, Devens, Massachusetts, USA
| | - Sanchayita Ghose
- Biologics Development, Global Product Development and Supply, Bristol Myers Squibb Company, Devens, Massachusetts, USA
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12
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Dyer R, Song Y, Chen J, Bigelow E, McGinnis J, Jenkins L, Ghose S, Li ZJ. Mechanistic insights into viral clearance during the chromatography steps in antibody processes by using virus surrogates. Biotechnol Prog 2021; 36:e3057. [PMID: 33405373 DOI: 10.1002/btpr.3057] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 07/24/2020] [Accepted: 07/27/2020] [Indexed: 11/12/2022]
Abstract
Viral safety is required for biological products to treat human diseases, and the burden of inactivation and or virus removal lies on the downstream purification process. Minute virus of mice (MVM) is a nonenveloped parvovirus commonly used as the worst-case model virus in validation studies because of its small size and high chemical stability. In this study, we investigated the use of MVM-mock virus particle (MVP) and bacteriophage ΦX174 as surrogates for MVM to mimic viral clearance studies, with a focus on chromatography operations. Based on structural models and comparison of log reduction value among MVM, MVP, and ΦX174, it was demonstrated that MVP can be used as a noninfectious surrogate to assess viral clearance during process development in multiple chromatography systems in a biosafety level one (BSL-1) laboratory. Protein A (ProA) chromatography was investigated to strategically assess the impact of the resin, impurities, and the monoclonal antibody product on virus removal.
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Affiliation(s)
- Rachel Dyer
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Yuanli Song
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Jie Chen
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Elizabeth Bigelow
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Jennifer McGinnis
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Lauren Jenkins
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Sanchayita Ghose
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
| | - Zheng Jian Li
- Biologics Development, Bristol-Myers Squibb, Devens, Massachusetts, USA
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13
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Stanevich V, Pachalla A, Nunez B, McInnes M, Nieder C, Schreffler J. Improving viral filtration capacity in biomanufacturing processes using aggregate binding properties of polyamide-6,6. Biotechnol Bioeng 2020; 118:1105-1115. [PMID: 33241852 DOI: 10.1002/bit.27634] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Revised: 11/06/2020] [Accepted: 11/13/2020] [Indexed: 11/10/2022]
Abstract
Virus retention filtration is a common step in modern biopharmaceutical manufacturing as it enables efficient removal of potential adventitious and endogenous viruses via size exclusion. Modern parvovirus retention filters have significantly improved fluxes and parvovirus retention in comparison to earlier versions of these filters. However, these filters may be more susceptible to premature fouling and require more effort for process optimization. Here, we demonstrate that polyamide-6,6 (nylon-6,6) membranes when used as prefilters can increase the capacity of these Parvovirus retentive filters that are less susceptible to premature fouling. We found that the mechanism of polyamide-mediated filtration improvement can be explained by the binding of monoclonal antibody (mAb) aggregates with a diameter of 20-100 nm, and we show that this mechanism is shared by other types of adsorptive prefilters. Finally, by the combination of mobile phase screening, additive spiking, and molecular dynamics simulations, we show that polyamide-6,6 removes mAb aggregates through hydrophobic interactions making its design space potentially complementary to other available prefilters. Our studies support the aggregate-mediated mechanism of flux decay during viral filtration and suggest that polyamide-6,6 could be considered as an alternative cost-effective option to extend the capacity of viral filters.
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Affiliation(s)
- Vitali Stanevich
- Janssen Pharmaceutical Companies of Johnson and Johnson, Malvern, Pennsylvania, USA
| | - Abhishek Pachalla
- Janssen Pharmaceutical Companies of Johnson and Johnson, Malvern, Pennsylvania, USA
| | - Briana Nunez
- Janssen Pharmaceutical Companies of Johnson and Johnson, Malvern, Pennsylvania, USA
| | | | | | - John Schreffler
- Janssen Pharmaceutical Companies of Johnson and Johnson, Malvern, Pennsylvania, USA
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14
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Junter GA, Lebrun L. Polysaccharide-based chromatographic adsorbents for virus purification and viral clearance. J Pharm Anal 2020; 10:291-312. [PMID: 32292625 PMCID: PMC7104128 DOI: 10.1016/j.jpha.2020.01.002] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Revised: 01/10/2020] [Accepted: 01/11/2020] [Indexed: 12/20/2022] Open
Abstract
Viruses still pose a significant threat to human and animal health worldwide. In the fight against viral infections, high-purity viral stocks are needed for manufacture of safer vaccines. It is also a priority to ensure the viral safety of biopharmaceuticals such as blood products. Chromatography techniques are widely implemented at both academic and industrial levels in the purification of viral particles, whole viruses and virus-like particles to remove viral contaminants from biopharmaceutical products. This paper focuses on polysaccharide adsorbents, particulate resins and membrane adsorbers, used in virus purification/removal chromatography processes. Different chromatographic modes are surveyed, with particular attention to ion exchange and affinity/pseudo-affinity adsorbents among which commercially available agarose-based resins (Sepharose®) and cellulose-based membrane adsorbers (Sartobind®) occupy a dominant position. Mainly built on the development of new ligands coupled to conventional agarose/cellulose matrices, the development perspectives of polysaccharide-based chromatography media in this antiviral area are stressed in the conclusive part.
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Affiliation(s)
- Guy-Alain Junter
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, PBS, 76000, Rouen, France
| | - Laurent Lebrun
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, PBS, 76000, Rouen, France
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15
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Masuda Y, Ogino Y, Yamaichi K, Takahashi Y, Nonaka K, Wakamatsu K. The prevention of an anomalous chromatographic behavior and the resulting successful removal of viruses from monoclonal antibody with an asymmetric charge distribution by using a membrane adsorber in highly efficient, anion-exchange chromatography in flow-through mode. Biotechnol Prog 2020; 36:e2955. [PMID: 31894893 DOI: 10.1002/btpr.2955] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2019] [Revised: 11/25/2019] [Accepted: 12/29/2019] [Indexed: 01/15/2023]
Abstract
Anion exchange (AEX) chromatography in the flow-through mode is a widely employed purification process for removal of process/product-related impurities and exogenous/endogenous viruses from monoclonal antibodies (mAbs). The pH of the mobile phase for AEX chromatography is typically set at half a unit below the isoelectric point (pI) of each mAb (i.e., pI - 0.5) or lower and, in combination with a low ionic strength, these conditions are usually satisfactory for both the recovery of the mAb and removal of impurities. However, we have recently encountered a tight binding of mAb1 to AEX resins under these standard chromatographic conditions. This anomalous adsorption behavior appears to be an effect of the asymmetric charge distribution on the surface of the mAb1. We found that mAb1 did not bind to the AEX resins if the mobile phase has a much lower pH and higher ionic strength, but those conditions would not allow adequate virus removal. We predicted that the use of membrane adsorbers might provide effective mAb1 purification, since the supporting matrix has a network structure that would be less susceptible to interactions with the asymmetric charge distribution on the protein surface. We tested the Natriflo HD-Q AEX membrane adsorber under standard chromatographic conditions and found that mAb1 flowed through the membrane adsorber, resulting in successful separation from murine leukemia virus. This AEX membrane adsorber is expected to be useful for process development because mAbs can be purified under similar standard chromatographic conditions regardless of their charge distributions.
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Affiliation(s)
- Yumiko Masuda
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd, Ohra-gun, Gunma, Japan.,Graduate School of Science and Technology, Gunma University, Kiryu-shi, Gunma, Japan
| | - Yuka Ogino
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd, Ohra-gun, Gunma, Japan
| | - Kozo Yamaichi
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd, Ohra-gun, Gunma, Japan
| | - Yusuke Takahashi
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd, Ohra-gun, Gunma, Japan
| | - Koichi Nonaka
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd, Ohra-gun, Gunma, Japan
| | - Kaori Wakamatsu
- Graduate School of Science and Technology, Gunma University, Kiryu-shi, Gunma, Japan
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16
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Wälchli R, Ressurreição M, Vogg S, Feidl F, Angelo J, Xu X, Ghose S, Jian Li Z, Le Saoût X, Souquet J, Broly H, Morbidelli M. Understanding mAb aggregation during low pH viral inactivation and subsequent neutralization. Biotechnol Bioeng 2019; 117:687-700. [PMID: 31784982 DOI: 10.1002/bit.27237] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Revised: 10/22/2019] [Accepted: 11/22/2019] [Indexed: 12/31/2022]
Abstract
Monoclonal antibodies (mAbs) and related recombinant proteins continue to gain importance in the treatment of a great variety of diseases. Despite significant advances, their manufacturing can still present challenges owing to their molecular complexity and stringent regulations with respect to product purity, stability, safety, and so forth. In this context, protein aggregates are of particular concern due to their immunogenic potential. During manufacturing, mAbs routinely undergo acidic treatment to inactivate viral contamination, which can lead to their aggregation and thereby to product loss. To better understand the underlying mechanism so as to propose strategies to mitigate the issue, we systematically investigated the denaturation and aggregation of two mAbs at low pH as well as after neutralization. We observed that at low pH and low ionic strength, mAb surface hydrophobicity increased whereas molecular size remained constant. After neutralization of acidic mAb solutions, the fraction of monomeric mAb started to decrease accompanied by an increase on average mAb size. This indicates that electrostatic repulsion prevents denatured mAb molecules from aggregation under acidic pH and low ionic strength, whereas neutralization reduces this repulsion and coagulation initiates. Limiting denaturation at low pH by d-sorbitol addition or temperature reduction effectively improved monomer recovery after neutralization. Our findings might be used to develop innovative viral inactivation procedures during mAb manufacturing that result in higher product yields.
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Affiliation(s)
- Ruben Wälchli
- Department of Chemistry and Applied Biosciences, ETH Zurich, Institute for Chemical and Bioengineering, Zurich, Switzerland
| | - Mariana Ressurreição
- Department of Chemistry and Applied Biosciences, ETH Zurich, Institute for Chemical and Bioengineering, Zurich, Switzerland
| | - Sebastian Vogg
- Department of Chemistry and Applied Biosciences, ETH Zurich, Institute for Chemical and Bioengineering, Zurich, Switzerland
| | - Fabian Feidl
- Department of Chemistry and Applied Biosciences, ETH Zurich, Institute for Chemical and Bioengineering, Zurich, Switzerland
| | - James Angelo
- Biologics Process Development, Global Product Development and Supply, Bristol-Myers Squibb Co., Devens, Massachusetts
| | - Xuankuo Xu
- Biologics Process Development, Global Product Development and Supply, Bristol-Myers Squibb Co., Devens, Massachusetts
| | - Sanchayita Ghose
- Biologics Process Development, Global Product Development and Supply, Bristol-Myers Squibb Co., Devens, Massachusetts
| | - Zheng Jian Li
- Biologics Process Development, Global Product Development and Supply, Bristol-Myers Squibb Co., Devens, Massachusetts
| | - Xavier Le Saoût
- Biotech Process Sciences, Merck KGaA, Corsier-sur-Vevey, Vaud, Switzerland
| | - Jonathan Souquet
- Biotech Process Sciences, Merck KGaA, Corsier-sur-Vevey, Vaud, Switzerland
| | - Hervé Broly
- Biotech Process Sciences, Merck KGaA, Corsier-sur-Vevey, Vaud, Switzerland
| | - Massimo Morbidelli
- Department of Chemistry and Applied Biosciences, ETH Zurich, Institute for Chemical and Bioengineering, Zurich, Switzerland
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17
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Orchard JD, Cetlin D, Pallansch M, Barlow R, Borman J, Dhar A, Pallansch L, Dickson M. Using a noninfectious MVM surrogate for assessing viral clearance during downstream process development. Biotechnol Prog 2019; 36:e2921. [DOI: 10.1002/btpr.2921] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 09/12/2019] [Accepted: 09/18/2019] [Indexed: 12/22/2022]
Affiliation(s)
| | | | - Melanie Pallansch
- School of Animal and Comparative Biomedical SciencesUniversity of Arizona Tuscon Arizona
| | | | | | - Arun Dhar
- School of Animal and Comparative Biomedical SciencesUniversity of Arizona Tuscon Arizona
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18
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Masuda Y, Tsuda M, Hashikawa-Muto C, Takahashi Y, Nonaka K, Wakamatsu K. Cation exchange chromatography performed in overloaded mode is effective in removing viruses during the manufacturing of monoclonal antibodies. Biotechnol Prog 2019; 35:e2858. [PMID: 31148380 DOI: 10.1002/btpr.2858] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 04/29/2019] [Accepted: 05/29/2019] [Indexed: 11/07/2022]
Abstract
Viral safety is a critical concern with regard to monoclonal antibody (mAb) products produced in mammalian cells such as Chinese hamster ovary cells. Manufacturers are required to ensure the safety of such products by validating the clearance of viruses in downstream purification steps. Cation exchange (CEX) chromatography is widely used in bind/elute mode as a polishing step in mAb purification. However, bind/elute modes require a large volume of expensive resin. To reduce the production cost, the use of CEX chromatography in overloaded mode has recently been investigated. The viral clearance ability in overloaded mode was evaluated using murine leukemia virus (MLV). Even under high-load conditions such as 2,000 g mAb/L resin, MLV was removed from mAb solutions. This viral clearance ability was not significantly affected by resin type or mAb type. The overloaded mode can also remove other types of viruses such as pseudorabies virus and reovirus Type 3 from mAb solutions. Based on these results, this cost-effective overloaded mode is comparable to the bind-elute mode in terms of viral removal.
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Affiliation(s)
- Yumiko Masuda
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd., Ohra-gun, Gunma, Japan.,Graduate School of Science and Technology, Gunma University, Kiryu-shi, Gunma, Japan
| | - Masashi Tsuda
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd., Ohra-gun, Gunma, Japan
| | - Chie Hashikawa-Muto
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd., Ohra-gun, Gunma, Japan
| | - Yusuke Takahashi
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd., Ohra-gun, Gunma, Japan
| | - Koichi Nonaka
- Biologics Technology Research Laboratories, Daiichi Sankyo Co., Ltd., Ohra-gun, Gunma, Japan
| | - Kaori Wakamatsu
- Graduate School of Science and Technology, Gunma University, Kiryu-shi, Gunma, Japan
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19
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Sipple P, Nguyen T, Patel K, Jaffe N, Chen Y, Khetan A. Suitability of a generic virus safety evaluation for monoclonal antibody investigational new drug applications. Biotechnol Prog 2019; 35:e2850. [PMID: 31125511 DOI: 10.1002/btpr.2850] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 05/05/2019] [Accepted: 05/06/2019] [Indexed: 11/07/2022]
Abstract
Biologics produced from CHO cell lines with endogenous virus DNA can produce retrovirus-like particles in cell culture at high titers, and other adventitious viruses can find their way through raw materials into the process to make a product. Therefore, it is the industry standard to have controls to avoid introduction of viruses into the production process, to test for the presence of viral particles in unclarified cell culture, and to develop purification procedures to ensure that manufacturing processes are robust for viral clearance. Data have been accumulated over the past four decades on unit operations that can inactivate and clear adventitious virus and provide a high degree of assurance for patient safety. During clinical development, biological products are traditionally tested at process set points for viral clearance. However, the widespread implementation of platform production processes to produce highly similar IgG antibodies for many indications makes it possible to leverage historical data and knowledge from representative molecules to allow for better understanding and control of virus safety. More recently, individualized viral clearance studies are becoming the rate-limiting step in getting new antibody molecules to clinic, particularly in Phase 0 and eIND situations. Here, we explore considerations for application of a generic platform virus clearance strategy that can be applied for relevant investigational antibodies within defined operational parameters in order to increase speed to the clinic and reduce validation costs while providing a better understanding and assurance of process virus safety.
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Affiliation(s)
- Patrick Sipple
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
| | - Tung Nguyen
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
| | - Krina Patel
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
| | - Neil Jaffe
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
| | - Yan Chen
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
| | - Anurag Khetan
- Product Development, Bristol-Myers Squibb, Princeton, New Jersey
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20
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Angelo J, Chollangi S, Müller‐Späth T, Jusyte S, Xu X, Ghose S, Li Z. Virus clearance validation across continuous capture chromatography. Biotechnol Bioeng 2019; 116:2275-2284. [DOI: 10.1002/bit.27012] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Revised: 04/11/2019] [Accepted: 05/02/2019] [Indexed: 11/11/2022]
Affiliation(s)
- James Angelo
- Biologics Process DevelopmentBristol‐Myers Squibb, IncDevens Massachusetts
| | - Srinivas Chollangi
- Biologics Process DevelopmentBristol‐Myers Squibb, IncDevens Massachusetts
| | | | - Simona Jusyte
- Viral Clearance Dept.WuXi Advanced Therapies UnitPhiladelphia Pennsylvania
| | - Xuankuo Xu
- Biologics Process DevelopmentBristol‐Myers Squibb, IncDevens Massachusetts
| | - Sanchayita Ghose
- Biologics Process DevelopmentBristol‐Myers Squibb, IncDevens Massachusetts
| | - Zhengjian Li
- Biologics Process DevelopmentBristol‐Myers Squibb, IncDevens Massachusetts
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21
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Fallahianbijan F, Giglia S, Carbrello C, Bell D, Zydney AL. Impact of protein fouling on nanoparticle capture within the Viresolve® Pro and Viresolve® NFP virus removal membranes. Biotechnol Bioeng 2019; 116:2285-2291. [PMID: 31081123 DOI: 10.1002/bit.27017] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Revised: 04/08/2019] [Accepted: 05/09/2019] [Indexed: 11/05/2022]
Abstract
Virus filtration is a robust size-based technique that can provide the high level of viral clearance required for the production of mammalian-derived biotherapeutics such as monoclonal antibodies. Several studies have shown that the retention characteristics of some, but not all, virus filters can be significantly affected by membrane fouling, but there have been no direct measurements of how protein fouling might alter the location of virus capture within these membranes. The objective of this study was to directly examine the effect of protein fouling by human immunoglobulin G (IgG) on virus capture within the Viresolve® Pro and Viresolve® NFP membranes by scanning electron microscopy using different size gold nanoparticles. IgG fouling shifted the capture location of 20 nm gold nanoparticles further upstream within the Viresolve® Pro filter due to the constriction and/or blockage of the pores in the virus retentive region of the filter. In contrast, IgG fouling had no measurable effect on the capture of 20 nm nanoparticles in the Viresolve® NFP membrane, and IgG fouling had no effect on the capture of larger 40 and 100 nm nanoparticles in either membrane. These results provide important insights into how protein fouling alters the virus retention characteristics of different virus filters.
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Affiliation(s)
- Fatemeh Fallahianbijan
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania
| | - Sal Giglia
- MilliporeSigma Corporation, Bedford, Massachusetts
| | | | - David Bell
- MilliporeSigma Corporation, Bedford, Massachusetts
| | - Andrew L Zydney
- Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania
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22
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Nazem‐Bokaee H, Chen D, O'Donnell SM, Zydney AL. New insights into the performance characteristics of the Planova‐series hollow‐fiber parvovirus filters using confocal and electron microscopy. Biotechnol Bioeng 2019; 116:2010-2017. [DOI: 10.1002/bit.26991] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Revised: 04/02/2019] [Accepted: 04/11/2019] [Indexed: 01/15/2023]
Affiliation(s)
- Hadi Nazem‐Bokaee
- Department of Chemical EngineeringThe Pennsylvania State UniversityUniversity Park Pennsylvania
| | - Dayue Chen
- Bioproduct Research and Development, Lilly Research LaboratoriesEli Lilly and CompanyIndianapolis Indiana
| | - Sean Michael O'Donnell
- Bioproduct Research and Development, Lilly Research LaboratoriesEli Lilly and CompanyIndianapolis Indiana
| | - Andrew L. Zydney
- Department of Chemical EngineeringThe Pennsylvania State UniversityUniversity Park Pennsylvania
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23
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Somasundaram B, Pleitt K, Shave E, Baker K, Lua LHL. Progression of continuous downstream processing of monoclonal antibodies: Current trends and challenges. Biotechnol Bioeng 2018; 115:2893-2907. [PMID: 30080940 DOI: 10.1002/bit.26812] [Citation(s) in RCA: 68] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2018] [Revised: 07/24/2018] [Accepted: 07/30/2018] [Indexed: 01/13/2023]
Abstract
Rapid advances in intensifying upstream processes for biologics production have left downstream processing as a bottleneck in the manufacturing scheme. Biomanufacturers are pursuing continuous downstream process development to increase efficiency and flexibility, reduce footprint and cost of goods, and improve product consistency and quality. Even after successful laboratory trials, the implementation of a continuous process at manufacturing scale is not easy to achieve. This paper reviews specific challenges in converting each downstream unit operation to a continuous mode. Key elements of developing practical strategies for overcoming these challenges are detailed. These include equipment valve complexity, favorable column aspect ratio, protein-A resin selection, quantitative assessment of chromatogram peak size and shape, holistic process characterization approach, and a customized process economic evaluation. Overall, this study provides a comprehensive review of current trends and the path forward for implementing continuous downstream processing at the manufacturing scale.
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Affiliation(s)
- Balaji Somasundaram
- Australian Research Council Training Centre for Biopharmaceutical Innovation, Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia
| | - Kristina Pleitt
- Australian Research Council Training Centre for Biopharmaceutical Innovation, Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia
| | - Evan Shave
- Australian Research Council Training Centre for Biopharmaceutical Innovation, Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia.,Patheon Biologics-a part of Thermo Fisher Scientific, Brisbane, Queensland, Australia
| | - Kym Baker
- Patheon Biologics-a part of Thermo Fisher Scientific, Brisbane, Queensland, Australia
| | - Linda H L Lua
- Australian Research Council Training Centre for Biopharmaceutical Innovation, Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Queensland, Australia.,Protein Expression Facility, The University of Queensland, Brisbane, Queensland, Australia
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24
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Gillespie C, Holstein M, Mullin L, Cotoni K, Tuccelli R, Caulmare J, Greenhalgh P. Continuous In‐Line Virus Inactivation for Next Generation Bioprocessing. Biotechnol J 2018; 14:e1700718. [DOI: 10.1002/biot.201700718] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 04/04/2018] [Indexed: 11/10/2022]
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25
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Gąciarz A, Khatri NK, Velez-Suberbie ML, Saaranen MJ, Uchida Y, Keshavarz-Moore E, Ruddock LW. Efficient soluble expression of disulfide bonded proteins in the cytoplasm of Escherichia coli in fed-batch fermentations on chemically defined minimal media. Microb Cell Fact 2017; 16:108. [PMID: 28619018 PMCID: PMC5471842 DOI: 10.1186/s12934-017-0721-x] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Accepted: 06/06/2017] [Indexed: 02/07/2023] Open
Abstract
BACKGROUND The production of recombinant proteins containing disulfide bonds in Escherichia coli is challenging. In most cases the protein of interest needs to be either targeted to the oxidizing periplasm or expressed in the cytoplasm in the form of inclusion bodies, then solubilized and re-folded in vitro. Both of these approaches have limitations. Previously we showed that soluble expression of disulfide bonded proteins in the cytoplasm of E. coli is possible at shake flask scale with a system, known as CyDisCo, which is based on co-expression of a protein of interest along with a sulfhydryl oxidase and a disulfide bond isomerase. With CyDisCo it is possible to produce disulfide bonded proteins in the presence of intact reducing pathways in the cytoplasm. RESULTS Here we scaled up production of four disulfide bonded proteins to stirred tank bioreactors and achieved high cell densities and protein yields in glucose fed-batch fermentations, using an E. coli strain (BW25113) with the cytoplasmic reducing pathways intact. Even without process optimization production of purified human single chain IgA1 antibody fragment reached 139 mg/L and hen avidin 71 mg/L, while purified yields of human growth hormone 1 and interleukin 6 were around 1 g/L. Preliminary results show that human growth hormone 1 was also efficiently produced in fermentations of W3110 strain and when glucose was replaced with glycerol as the carbon source. CONCLUSIONS Our results show for the first time that efficient production of high yields of soluble disulfide bonded proteins in the cytoplasm of E. coli with the reducing pathways intact is feasible to scale-up to bioreactor cultivations on chemically defined minimal media.
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Affiliation(s)
- Anna Gąciarz
- Faculty of Biochemistry and Molecular Medicine, University of Oulu, P.O. Box 5400, 90014 Oulu, Finland
| | - Narendar Kumar Khatri
- The Department of Process and Environment Engineering, University of Oulu, P.O. Box 8000, 90014 Oulu, Finland
| | - M. Lourdes Velez-Suberbie
- The Advanced Center for Biochemical Engineering, Department of Biochemical Engineering, University College London, Bernard Katz Building, Gower Street, London, WC1E 6BT UK
| | - Mirva J. Saaranen
- Faculty of Biochemistry and Molecular Medicine, University of Oulu, P.O. Box 5400, 90014 Oulu, Finland
| | - Yuko Uchida
- Faculty of Biochemistry and Molecular Medicine, University of Oulu, P.O. Box 5400, 90014 Oulu, Finland
| | - Eli Keshavarz-Moore
- The Advanced Center for Biochemical Engineering, Department of Biochemical Engineering, University College London, Bernard Katz Building, Gower Street, London, WC1E 6BT UK
| | - Lloyd W. Ruddock
- Faculty of Biochemistry and Molecular Medicine, University of Oulu, P.O. Box 5400, 90014 Oulu, Finland
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26
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Singh N, Arunkumar A, Peck M, Voloshin AM, Moreno AM, Tan Z, Hester J, Borys MC, Li ZJ. Development of adsorptive hybrid filters to enable two-step purification of biologics. MAbs 2016; 9:350-363. [PMID: 27929735 PMCID: PMC5297532 DOI: 10.1080/19420862.2016.1267091] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2016] [Revised: 11/18/2016] [Accepted: 11/28/2016] [Indexed: 10/20/2022] Open
Abstract
Recent progress in mammalian cell culture process has resulted in significantly increased product titers, but also a substantial increase in process- and product-related impurities. Due to the diverse physicochemical properties of these impurities, there is constant need for new technologies that offer higher productivity and improved economics without sacrificing the process robustness required to meet final drug substance specifications. Here, we examined the use of new synthetic adsorptive hybrid filters (AHF) modified with the high binding capacity of quaternary amine (Emphaze™ AEX) and salt-tolerant biomimetic (Emphaze™ ST-AEX) ligands for clearance of process-related impurities like host cell protein (HCP), residual DNA, and virus. The potential to remove soluble aggregates was also examined. Our aim was to develop a mechanistic understanding of the interactions governing adsorptive removal of impurities during filtration by evaluating the effect of various filter types, feed streams, and process conditions on impurity removal. The ionic capacity of these filters was measured and correlated with their ability to remove impurities for multiple molecules. The ionic capacity of AHF significantly exceeded that of traditional adsorptive depth filters (ADF) by 40% for the Emphaze™ AEX and by 700% for the Emphaze™ ST-AEX, providing substantially higher reduction of soluble anionic impurities, including DNA, HCPs and model virus. Nevertheless, we determined that ADF with filter aid provided additional hydrophobic functionality that resulted in removal of higher molecular weight species than AHF. Implementing AHF demonstrated improved process-related impurity removal and viral clearance after Protein A chromatography and enabled a two-step purification process. The consequences of enhanced process performance are far reaching because it allows the downstream polishing train to be restructured and simplified, and chromatographic purity standards to be met with a reduced number of chromatographic steps.
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Affiliation(s)
- Nripen Singh
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
| | - Abhiram Arunkumar
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
| | - Michael Peck
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
| | - Alexei M. Voloshin
- Life Science Process Technologies, 3M Purification Inc., St Paul, MN, USA
| | - Angela M. Moreno
- Life Science Process Technologies, 3M Purification Inc., St Paul, MN, USA
| | - Zhijun Tan
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
| | - Jonathan Hester
- Life Science Process Technologies, 3M Purification Inc., St Paul, MN, USA
| | - Michael C. Borys
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
| | - Zheng Jian Li
- Biologics Development, Global Manufacturing and Supply, Bristol-Myers Squibb Company, Devens, MA, USA
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27
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Bartels J, Souza MN, Schaper A, Árki P, Kroll S, Rezwan K. Amino-Functionalized Ceramic Capillary Membranes for Controlled Virus Retention. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016; 50:1973-81. [PMID: 26771147 DOI: 10.1021/acs.est.5b05124] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A straightforward chemical functionalization strategy using aminosilanes for high-flux yttria-stabilized zirconia capillary membranes is presented (macroporous, d50 = 144 nm, open porosity =49%, membrane flux ∼150 L/(m(2)hbar)). Three different aminosilanes with one, two or three amino groups per silane molecule, namely 3-aminopropyltriethoxysilane (APTES), N-(2-aminoethyl)-3-aminopropyltriethoxysilane (AE-APTES) and N-(3-trimethoxysilylpropyl)diethylenetriamine (TPDA), are used to generate the amino-functionalized membranes. With a higher number of amino groups per silane molecule increased loading capacities between 0.44 and 1.01 accessible amino groups/nm(2) membrane are achieved. Streaming potential measurements confirm that the zeta-potential of the membrane surface is converted from negative (non-functionalized) to positive (amino-functionalized). By operation in dead-end filtration mode using the model virus MS2 (diameter = 25 nm, IEP = 3.9) the virus retention capacity of the amino-functionalized membranes is significantly increased and log reduction values (LRVs) of up to 9.6 ± 0.3 (TPDA) are obtained whereas a LRV < 0.3 is provided by the non-functionalized membranes. Long-term dead-end filtration experiments for 1 week reveal a high stability of immobilized aminosilanes (TPDA), being robust against leaching. By iterative backflushing with desorption buffer MS2-loaded membranes are successfully regenerated being reusable for a new filtration cycle. The presented functionalization platform is highly promising for controlled virus retention.
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Affiliation(s)
- Julia Bartels
- Advanced Ceramics, University of Bremen , Am Biologischen Garten 2, 28359 Bremen, Germany
| | - Marina N Souza
- Advanced Ceramics, University of Bremen , Am Biologischen Garten 2, 28359 Bremen, Germany
| | - Amelie Schaper
- Advanced Ceramics, University of Bremen , Am Biologischen Garten 2, 28359 Bremen, Germany
| | - Pál Árki
- Institute of Electronic- and Sensor-Materials, Technical University (TU) Bergakademie Freiberg , Gustav-Zeuner Str. 3, 09599 Freiberg, Germany
| | - Stephen Kroll
- Advanced Ceramics, University of Bremen , Am Biologischen Garten 2, 28359 Bremen, Germany
- MAPEX - Center for Materials and Processes, University of Bremen , Am Fallturm 1, 28359 Bremen, Germany
| | - Kurosch Rezwan
- Advanced Ceramics, University of Bremen , Am Biologischen Garten 2, 28359 Bremen, Germany
- MAPEX - Center for Materials and Processes, University of Bremen , Am Fallturm 1, 28359 Bremen, Germany
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Zhang M, Miesegaes GR, Lee M, Coleman D, Yang B, Trexler-Schmidt M, Norling L, Lester P, Brorson KA, Chen Q. Quality by design approach for viral clearance by protein a chromatography. Biotechnol Bioeng 2014; 111:95-103. [PMID: 23860745 PMCID: PMC4033531 DOI: 10.1002/bit.24999] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2013] [Revised: 07/11/2013] [Accepted: 07/12/2013] [Indexed: 11/16/2022]
Abstract
Protein A chromatography is widely used as a capture step in monoclonal antibody (mAb) purification processes. Antibodies and Fc fusion proteins can be efficiently purified from the majority of other complex components in harvested cell culture fluid (HCCF). Protein A chromatography is also capable of removing modest levels of viruses and is often validated for viral clearance. Historical data mining of Genentech and FDA/CDER databases systematically evaluated the removal of model viruses by Protein A chromatography. First, we found that for each model virus, removal by Protein A chromatography varies significantly across mAbs, while remains consistent within a specific mAb product, even across the acceptable ranges of the process parameters. In addition, our analysis revealed a correlation between retrovirus and parvovirus removal, with retrovirus data generally possessing a greater clearance factor. Finally, we describe a multivariate approach used to evaluate process parameter impacts on viral clearance, based on the levels of retrovirus-like particles (RVLP) present among process characterization study samples. It was shown that RVLP removal by Protein A is robust, that is, parameter effects were not observed across the ranges tested. Robustness of RVLP removal by Protein A also correlates with that for other model viruses such as X-MuLV, MMV, and SV40. The data supports that evaluating RVLP removal using process characterization study samples can establish multivariate acceptable ranges for virus removal by the protein A step for QbD. By measuring RVLP instead of a model retrovirus, it may alleviate some of the technical and economic challenges associated with performing large, design-of-experiment (DoE)-type virus spiking studies. This approach could also serve to provide useful insight when designing strategies to ensure viral safety in the manufacturing of a biopharmaceutical product.
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Affiliation(s)
- Min Zhang
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | | | - Michael Lee
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | - Daniel Coleman
- Nonclinical Biostatistics, Genentech, IncSouth San Francisco, California
| | - Bin Yang
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | - Melody Trexler-Schmidt
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | - Lenore Norling
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | - Philip Lester
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
| | - Kurt A Brorson
- Office of Biotechnology Products, CDER/FDASilver Spring, Maryland
| | - Qi Chen
- Process Virology, Purification Development, MS 10, Genentech, Inc.1 DNA Way, South San Francisco, California, 04080
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Rambal V, Müller K, Dang-Heine C, Sattler A, Dziubianau M, Weist B, Luu SH, Stoyanova A, Nickel P, Thiel A, Neumann A, Schweiger B, Reinke P, Babel N. Differential influenza H1N1-specific humoral and cellular response kinetics in kidney transplant patients. Med Microbiol Immunol 2013; 203:35-45. [PMID: 24057515 DOI: 10.1007/s00430-013-0312-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2013] [Accepted: 09/03/2013] [Indexed: 12/17/2022]
Abstract
Renal transplant recipients (RTR) are considered at high risk for influenza-associated complications due to immunosuppression. The efficacy of standard influenza vaccination in RTRs is unclear. Hence, we evaluated activation of the adaptive immunity by the pandemic influenza A(H1N1) 2009 (A(H1N1)pdm09) vaccine in RTRs as compared to healthy controls. To determine cross-reactivity and/or bystander activation, seasonal trivalent influenza vaccine and tetanus/diphteria toxoid (TT/DT) vaccine-specific T cells along with allospecific T cells were quantified before and after A(H1N1)pdm09 vaccination. Vaccination-induced alloimmunity was additionally determined by quantifying serum creatinine and proinflammatory protein IP-10. Contrary to healthy controls, RTRs required a booster vaccination to achieve seroconversion (13.3 % day 21; 90 % day 90). In contrast to humoral immunity, sufficient A(H1N1)pdm09-specific T-cell responses were mounted in RTRs already after the first immunization with a magnitude comparable with healthy controls. Interestingly, vaccination simultaneously boosted T cells reacting to seasonal flu but not to TT/DT, suggesting cross-activation. No alloimmune effects were recorded. In conclusion, protective antibody responses required booster vaccination. However, sufficient cellular immunity is established already after the first vaccination, demonstrating differential kinetics of humoral and cellular immunity.
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Affiliation(s)
- Vinay Rambal
- Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charité University Medicine Berlin, Campus Virchow Clinic, Augustenburger Platz 1, 13353, Berlin, Germany
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