Octyl-Decorated Fréchet-Type Dendrons: A General Motif for Visualisation of Static and Dynamic Behaviour Using Scanning Tunnelling Microscopy?

Alkyl chain length effects on double-deck assembly at a liquid/solid interface

Controlled double-deck packing is an appealing means to expand upon conventional 2D self-assembly which is critical in crystal engineering, yet it is rare and poorly understood. Herein, we report the first systematic study of double-deck assembly in a series of alkylated aminoquinone derivatives at the liquid-solid interface. The competition between the fraction of alkyl chains adsorbed on the surface and the optimal conformation of the alkyl chains near the head group leads to a stepwise structural transformation ranging from complete double-deck packing to complete monolayer packing. Alkyl chains on the bottom or top layer of the double-deck assemblies were selectively visualized by carefully tuning the scanning tunneling microscopy settings. A method to easily identify mirror image domains was discovered based on the coincidence of domain boundaries with a graphite main axis. The effect of molecular symmetry and metal complexation on the formation of the double-deck assembly was also explored. Based on 2D crystal engineering principles, this bottom-up double-deck assembly can potentially provide an essential toehold for constructing precise 3D hierarchical structures.

Enantiomer surface chemistry: conglomerate versus racemate formation on surfaces

Research on surface chirality is motivated by the need to develop functional chiral surfaces for enantiospecific applications. While molecular chirality in 3D has been the subject of study for almost two centuries, many aspects of 2D chiral surface chemistry have yet to be addressed. In 3D, racemic mixtures of chiral molecules tend to aggregate into racemate (molecularly heterochiral) crystals much more frequently than conglomerate (molecularly homochiral) crystals. Whether chiral adsorbates on surfaces preferentially aggregate into heterochiral rather than homochiral domains (2D crystals or clusters) is not known. In this review, we have made the first attempt to answer the following question based on available data: in 2D racemic mixtures adsorbed on surfaces, is there a clear preference for homochiral or heterochiral aggregation? The current hypothesis is that homochiral packing is preferred on surfaces; in contrast to 3D where heterochiral packing is more common. In this review, we present a simple hierarchical scheme to categorize the chirality of adsorbate-surface systems. We then review the body of work using scanning tunneling microscopy predominantly to study aggregation of racemic adsorbates. Our analysis of the existing literature suggests that there is no clear evidence of any preference for either homochiral or heterochiral aggregation at the molecular level by chiral and prochiral adsorbates on surfaces.

Simulating self-organized molecular patterns using interaction-site models

Molecular building blocks interacting at the nanoscale organize spontaneously into stable monolayers that display intriguing long-range ordering motifs on the surface of atomic substrates. The patterning process, if appropriately controlled, represents a viable route to manufacture practical nanodevices. With this goal in mind, we seek to capture the salient features of the self-assembly process by means of an interaction-site model. The geometry of the building blocks, the symmetry of the underlying substrate, and the strength and range of interactions encode the self-assembly process. By means of Monte Carlo simulations, we have predicted an ample variety of ordering motifs which nicely reproduce the experimental results. Here, we explore in detail the phase behavior of the system in terms of the temperature and the lattice constant of the underlying substrate.

Conformationally pre-organized and pH-responsive flat dendrons: synthesis and self-assembly at the liquid-solid interface

Efficient Cu-catalyzed 1,3-dipolar cycloaddition reactions have been used to prepare two series of three regioisomers of G-1 and G-2 poly(triazole-pyridine) dendrons. The G-1 and G-2 dendrons consist of branched yet conformationally pre-organized 2,6-bis(phenyl/pyridyl-1,2,3-triazol-4-yl)pyridine (BPTP) monomeric and trimeric cores, respectively, carrying one focal and either two or four peripheral alkyl side chains. In the solid state, the conformation and supramolecular organization were studied by means of a single crystal X-ray structure analysis of one derivative. At the liquid-solid interface, the self-assembly behavior was investigated by scanning tunneling microscopy (STM) on graphite surfaces. Based on the observed supramolecular organization, it appears that the subtle balance between conformational preferences inherent in the dendritic backbone on the one side and the adsorption and packing of the alkyl side chains on the graphite substrate on the other side dictate the overall structure formation in 2D.

Mixing behavior of alkoxylated dehydrobenzo [12]annulenes at the solid-liquid interface: scanning tunneling microscopy and Monte Carlo simulations

We present a systematic scanning tunneling microscopic study on the mixing behavior of molecules (DBAs) with different alkyl substituents at the solid-liquid interface to reveal the phase behavior of complex systems. The phase behavior of binary mixtures of alkylated DBAs at the solid-liquid interface can be predicted by the 2D isomorphism coefficient. In addition, we also investigated the influence of coadsorption of template molecules on the phase behavior of DBA mixtures. Coadsorption of these molecules significantly promotes mixing of DBAs, possibly by affecting the recognition between alkyl chains. Monte Carlo simulations prove that the 2D isomorphism coefficient can predict the phase behavior at the interface. These results are helpful for the understanding of phase behavior of complex assembling systems and also for the design of programmable porous networks and hierarchical architectures at the solid-liquid interface.

Predicting the influence of a p2-symmetric substrate on molecular self-organization with an interaction-site model

An interaction-site model can a priori predict molecular self-organisation on a new substrate in Monte Carlo simulations. This is experimentally confirmed with scanning tunnelling microscopy on Fréchet dendrons of a pentacontane template. Local and global ordering motifs, inclusion molecules and a rotated unit cell are correctly predicted.

Molecular jigsaw: pattern diversity encoded by elementary geometrical features

Scanning tunneling microscopy (STM) images of self-organized monolayers of Frechet dendrons display a variety of two-dimensional ordering motifs, which are influenced by engineering the molecular interactions. An interaction-site model condenses the essential molecular properties determined by molecular mechanics modeling, which in a Monte Carlo approach successfully predicts the various ordering motifs. This confirms that geometry as well as a few salient weak interaction sites encode these structural motifs.

Dual-emissive photoluminescent Langmuir-Blodgett films of decatungstoeuropate and an amphiphilic iridium complex

Langmuir monolayers and Langmuir-Blodgett (LB) films of the decatungstoeuropate [Eu(W(5)O(18))(2)](9-) (EuW(10)) and the amphiphilic Ir complex 1 have been successfully fabricated by using the adsorption properties of the EuW(10) polyanion dissolved in the aqueous subphase onto a positively charged 1 monolayer at the air-water interface. The compression isotherms and Brewster angle microscopy (BAM) of monolayers of 1 on pure water (1 monolayer) and on a subphase containing 10(-6) M EuW(10) and 10(-3) M NaCl (1/EuW(10) monolayer) have been studied. Infrared and UV-vis spectroscopy of the transferred LB films indicate that EuW(10) and 1 molecules are incorporated within these LB films. X-ray reflectivity (SXR) and atomic force microscopy (AFM) experiments indicate that LB films of 1 present a heterogeneous morphology while 1/EuW(10) films show a flatter and more homogeneous surface as well as a layered structure with a periodicity of 4.1 nm. Mixed monolayers of 1 and DODA (dimethyldioctadecylammonium bromide) have been prepared with EuW(10) polyanions in the subphase to control the concentration of 1 and EuW(10) polyanions within the LB films. AFM and SXR experiments with the transferred LB films show that the dilution of 1 with DODA improves the layered structure. The luminescence of 1 is partially quenched by EuW(10) in the 1/EuW(10) LB films, while emission from EuW(10) is not detected. On the other hand, emission from both entities is preserved in the LB films prepared from mixed DODA/1 monolayers, in which the red and yellow emissions arise independently from EuW(10) and 1, respectively. The different DODA:1 ratios lead to changes in the emission color. Therefore, they constitute a promising color-tunable luminescent material.

Self-organization of gold-containing hydrogen-bonded rosette assemblies on graphite surface

The self-organization of supramolecular structures, in particular gold-containing hydrogen-bonded rosettes, on highly oriented pyrolytic graphite (HOPG) surfaces was investigated by tapping-mode atomic force microscopy (TM-AFM) and scanning tunneling microscopy (STM). TM-AFM and high-resolution STM results show that these hydrogen-bonded assemblies self-organize to form highly ordered domains on HOPG surfaces. We find that a subtle change in one of the building blocks induces two different orientations of the assembly with respect to the surface. These results provide information on the control over the construction of supramolecular nanoarchitectures in 2D with the potential for the manufacturing of functional materials based on structural manipulation of molecular components.

Synthesis of dehydrobenzo[18]annulene derivatives and formation of self-assembled monolayers: implications of core size on alkyl chain interdigitation

The synthesis of a series of dodecadehydrotribenzo[18]annulene ([18]DBA) derivatives is reported, together with their steady-state absorption and fluorescence properties. The main focus, though, is on the self-assembly of these compounds at the liquid-solid interface as investigated with scanning tunneling microscopy (STM), highlighting the effect of alkyl chain orientation and alkyl chain length on the molecular ordering. Owing to the large triangular pi-electron system of the [18]DBAs, two different types of alkyl chain orientation are observed. The observed changes in the monolayer networks upon elongation of the alkyl chains are attributed to the increased van der Waals interactions between molecules and substrate. The effect of the core size on the alkyl chain orientation and, as a result, the monolayer structure is discussed in relation to the results obtained previously for triangularly-shaped dehydrobenzo [12]annulene ([12]DBA) derivatives and triphenylene derivatives. A guideline for substituent spacing allowing control of molecular alignment for large planar pi-electron systems utilizing directional alkyl chain interdigitation is also discussed.

Spontaneous resolution, whence and whither: from enantiomorphic solids to chiral liquid crystals, monolayers and macro- and supra-molecular polymers and assemblies

One of the great challenges in stereochemistry is the explanation of why some molecules resolve spontaneously while others do not. In this critical review the recent advances in the creation of chiral systems from achiral and racemic compounds in three-, two- and one-dimensional systems are discussed. There are some groups of molecules in some systems that do tend to display conglomerates, which may suggest that there are enantiophobic and enantiophilic molecules whose assembly is guided by the structural and thermodynamic properties of the systems in question.

Two-Dimensional Porous Molecular Networks of Dehydrobenzo[12]annulene Derivatives via Alkyl Chain Interdigitation

The self-assembly of a series of hexadehydrotribenzo[12]annulene (DBA) derivatives has been scrutinized by scanning tunneling microscopy (STM) at the liquid-solid interface. First, the influence of core symmetry on the network structure was investigated by comparing the two-dimensional (2D) ordering of rhombic bisDBA 1a and triangular DBA 2a (Figure 1). BisDBA 1a forms a Kagomé network upon physisorption from 1,2,4-trichlorobenzene (TCB) onto highly oriented pyrolytic graphite (HOPG). Under similar experimental conditions, DBA 2a shows the formation of a honeycomb network. The core symmetry and location of alkyl substituents determine the network structure. The most remarkable feature of the DBA networks is the interdigitation of the nonpolar alkyl chains: they connect the pi-conjugated cores and direct their orientation. As a result, 2D open networks with voids are formed. Second, the effect of alkyl chain length on the structure of DBA patterns was investigated. Upon increasing the length of the alkyl chains (DBAs 3c-e) a transition from honeycomb networks to linear networks was observed in TCB, an observation attributed to stronger molecule-substrate interactions. Third, the effect of solvent on the structure of the nonpolar DBA networks was investigated in four different solvents: TCB as a polar aromatic solvent, 1-phenyloctane as a solvent having both aromatic and aliphatic moieties, n-tetradecane as an aliphatic solvent, and octanoic acid as a polar alkylated solvent. The solvent dramatically changes the structure of the DBA networks. The solvent effects are discussed in terms of factors that influence the mobility of molecules at the liquid-solid interface such as solvation.

Supramolecular Self-Organization of “Janus-like” Diblock Codendrimers: Synthesis, Thermal Behavior, and Phase Structure Modeling

We report on the design and synthesis of three series of segmented amphiphilic block codendrimers, and on their self-organizing behavior in liquid-crystalline mesophases. Connecting two prefunctionalized monodendrons, each differing in their chemical constitution and generation number, yielded these diblock supermolecules. One wedge of the codendrimer was made hydrophobic, and is based on a branched poly(benzyl ether) monodendron functionalized at the periphery by lipophilic aliphatic fragments (also known as Percec dendrons). The other segment was made hydrophilic by the grafting of hydroxyl-containing moieties onto the focal functions of the former dendrons. Both types of dendrons were prepared independently by convergent methods and then joined in the ultimate stage of the synthetic procedure by cross-coupling reactions. In this way, the proportion of the dendritic blocks was varied independently to allow control of the hydrophilic/hydrophobic balance (HHB), the hydrogen-bonding ability, and consequently the capacity to tune the mesomorphic properties of the resulting "superamphiphiles" was anticipated. Essentially all the dendritic compounds display a thermotropic mesomorphism directly at or near room temperature as determined by using X-ray diffraction, polarized optical microscopy, and differential scanning calorimetry. The nature and the supramolecular organization of the mesophases, namely columnar and cubic phases, are correlated to the size of the respective block monodendrons and the chemical structures of the dendromesogens. The molecular organization within the cubic phases can be geometrically described and well understood by the space-filling polyhedron model.

Self-Organization of a Self-Assembled Supramolecular Rectangle, Square, and Three-Dimensional Cage on Au(111) Surfaces

The structure and conformation of three self-assembled supramolecular species, a rectangle, a square, and a three-dimensional cage, on Au111 surfaces were investigated by scanning tunneling microscopy. These supramolecular assemblies adsorb on Au111 surfaces and self-organize to form highly ordered adlayers with distinct conformations that are consistent with their chemical structures. The faces of the supramolecular rectangle and square lie flat on the surface, preserving their rectangle and square conformations, respectively. The three-dimensional cage also forms well-ordered adlayers on the gold surface, forming regular molecular rows of assemblies. When the rectangle and cage were mixed together, the assemblies separated into individual domains, and no mixed adlayers were observed. These results provide direct evidence of the noncrystalline solid-state structures of these assemblies and information about how they self-organize on Au111 surfaces, which is of importance in the potential manufacturing of functional nanostructures and devices.

Self-Assembly of PcOC8 and Its Sandwich Lanthanide Complex Pr(PcOC8)2 with Oligo(Phenylene-ethynylene) Molecules

Self-assemblies of octakis(octyloxy) phthalocyanine (PcOC8) and its sandwich lanthanide complex, substituted praseodymium bis(phthalocyanine) (Pr(PcOC8)(2)), with oligo(phenylene-ethynylene) (OPE) have been investigated by scanning tunneling microscopy (STM) on a highly oriented pyrolytic graphite (HOPG) surface. The assemblies were prepared by dissolving the molecules in phenyloctane solution. It was found that both PcOC8 and Pr(PcOC8)(2) can form 4-fold or 6-fold symmetrical adlayers on HOPG. The intramolecular structure of Pr(PcOC8)(2) molecule was revealed by a high-resolution STM image. When OPE molecules are added into phenyloctane solvent, Pr(PcOC8)(2) molecules prefer to form an ordered adlayer at the top of the OPE adlayer, while PcOC8 molecules adsorb on HOPG surface directly and form separated domains with OPE. These results may be helpful to construct surface assemblies and develop molecular electronic devices in the future.