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Angulo B, Herrerías CI, Hormigón Z, Mayoral JA, Salvatella L. Copper-catalyzed cyclopropanation reaction of but-2-ene. J Mol Model 2018; 24:195. [PMID: 29974250 DOI: 10.1007/s00894-018-3737-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Accepted: 06/25/2018] [Indexed: 10/28/2022]
Abstract
The mechanism of the copper(I)-catalyzed cyclopropanation reaction for methyl diazoacetate with both (Z)- and (E)-but-2-ene stereoisomers has been studied using the 6-311++G(d,p) basis set by means of M06-2X and O3LYP functionals. According to both methods, the rate-limiting step is the formation of a copper-carbene intermediate, formed by association between methyl diazoacetate and bis(acetonitrile)-copper(I) ion with the concomitant extrusion of dinitrogen. Cis/trans diastereoselectivity for the cyclopropanation reaction of a 1,2-disubstituted alkene ((Z)-but-2-ene) has been theoretically studied for the first time through the proper location of transition states on the potential-energy surface with the O3LYP method, since no transition structures could be found with the M06-2X functional due to the extreme flatness of the potential-energy surface. The calculated stereoselectivities involving two acetonitrile ligands or one dichloromethane molecule show qualitative agreement with experimental data. This study allows attributing the origin of the selectivity to steric interactions between the ligands of the catalyst system and the olefin substituents. The comparison between the corresponding activation barriers for the direct insertion step shows a higher reactivity for the Z stereoisomer of but-2-ene, consistently with the larger reactant destabilization through steric interactions.
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Affiliation(s)
- Beatriz Angulo
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH), CSIC-Universidad de Zaragoza, Pedro Cerbuna 12, E-50009, Zaragoza, Spain
| | - Clara I Herrerías
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH), CSIC-Universidad de Zaragoza, Pedro Cerbuna 12, E-50009, Zaragoza, Spain
| | - Zoel Hormigón
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH), CSIC-Universidad de Zaragoza, Pedro Cerbuna 12, E-50009, Zaragoza, Spain
| | - José Antonio Mayoral
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH), CSIC-Universidad de Zaragoza, Pedro Cerbuna 12, E-50009, Zaragoza, Spain
| | - Luis Salvatella
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH), CSIC-Universidad de Zaragoza, Pedro Cerbuna 12, E-50009, Zaragoza, Spain.
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Chung LW, Sameera WMC, Ramozzi R, Page AJ, Hatanaka M, Petrova GP, Harris TV, Li X, Ke Z, Liu F, Li HB, Ding L, Morokuma K. The ONIOM Method and Its Applications. Chem Rev 2015; 115:5678-796. [PMID: 25853797 DOI: 10.1021/cr5004419] [Citation(s) in RCA: 752] [Impact Index Per Article: 83.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Lung Wa Chung
- †Department of Chemistry, South University of Science and Technology of China, Shenzhen 518055, China
| | - W M C Sameera
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, 34-4 Takano Nishihiraki-cho, Sakyo, Kyoto 606-8103, Japan
| | - Romain Ramozzi
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, 34-4 Takano Nishihiraki-cho, Sakyo, Kyoto 606-8103, Japan
| | - Alister J Page
- §Newcastle Institute for Energy and Resources, The University of Newcastle, Callaghan 2308, Australia
| | - Miho Hatanaka
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, 34-4 Takano Nishihiraki-cho, Sakyo, Kyoto 606-8103, Japan
| | - Galina P Petrova
- ∥Faculty of Chemistry and Pharmacy, University of Sofia, Bulgaria Boulevard James Bourchier 1, 1164 Sofia, Bulgaria
| | - Travis V Harris
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, 34-4 Takano Nishihiraki-cho, Sakyo, Kyoto 606-8103, Japan.,⊥Department of Chemistry, State University of New York at Oswego, Oswego, New York 13126, United States
| | - Xin Li
- #State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Zhuofeng Ke
- ∇School of Chemistry and Chemical Engineering, Sun Yat-sen University, Guangzhou 510275, China
| | - Fengyi Liu
- ○Key Laboratory of Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an, Shaanxi 710119, China
| | - Hai-Bei Li
- ■School of Ocean, Shandong University, Weihai 264209, China
| | - Lina Ding
- ▲School of Pharmaceutical Sciences, Zhengzhou University, 100 Kexue Avenue, Zhengzhou, Henan 450001, China
| | - Keiji Morokuma
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, 34-4 Takano Nishihiraki-cho, Sakyo, Kyoto 606-8103, Japan
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Xue YS, Cai YP, Chen ZX. Mechanism and stereoselectivity of the Rh(ii)-catalyzed cyclopropanation of diazooxindole: a density functional theory study. RSC Adv 2015. [DOI: 10.1039/c5ra07981k] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
A density functional theory study was performed to understand the detailed mechanisms and stereoselectivity of the rhodium(ii)-catalyzed cyclopropanation reactions with diazooxindole and styrene.
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Affiliation(s)
- Yun-Sheng Xue
- Institute of Theoretical and Computational Chemistry
- Key Laboratory of Mesoscopic Chemistry of MOE
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing
| | - Yu-Ping Cai
- Institute of Theoretical and Computational Chemistry
- Key Laboratory of Mesoscopic Chemistry of MOE
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing
| | - Zhao-Xu Chen
- Institute of Theoretical and Computational Chemistry
- Key Laboratory of Mesoscopic Chemistry of MOE
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing
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Walters AJC, Reek JN, de Bruin B. Computed Propagation and Termination Steps in [(Cycloocta-2,6-dien-1-yl)RhIII(polymeryl)]+ Catalyzed Carbene Polymerization Reactions. ACS Catal 2014. [DOI: 10.1021/cs500160c] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Annemarie J. C. Walters
- Van ‘t Hoff Institute
for Molecular Sciences (HIMS), Homogeneous and Supramolecular Catalysis
group, Universiteit van Amsterdam (UvA), P.O. Box 94720, 1090 GS Amsterdam, The Netherlands
| | - Joost N.H. Reek
- Van ‘t Hoff Institute
for Molecular Sciences (HIMS), Homogeneous and Supramolecular Catalysis
group, Universiteit van Amsterdam (UvA), P.O. Box 94720, 1090 GS Amsterdam, The Netherlands
| | - Bas de Bruin
- Van ‘t Hoff Institute
for Molecular Sciences (HIMS), Homogeneous and Supramolecular Catalysis
group, Universiteit van Amsterdam (UvA), P.O. Box 94720, 1090 GS Amsterdam, The Netherlands
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Tsipis AC. DFT/TDDFT insights into the chemistry, biochemistry and photophysics of copper coordination compounds. RSC Adv 2014. [DOI: 10.1039/c4ra04921g] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Highlighting the recent progress in DFT/TDDFT application to coordination chemistry of copper.
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Affiliation(s)
- Athanassios C. Tsipis
- Laboratory of Inorganic and General Chemistry
- Department of Chemistry
- University of Ioannina
- 451 10 Ioannina
- Greece
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Herndon JW. The chemistry of the carbon-transition metal double and triple bond: Annual survey covering the year 2011. Coord Chem Rev 2013. [DOI: 10.1016/j.ccr.2013.05.011] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Jiménez-Osés G, Vispe E, Roldán M, Rodríguez-Rodríguez S, López-Ram-de-Viu P, Salvatella L, Mayoral JA, Fraile JM. Stereochemical Outcome of Copper-Catalyzed C–H Insertion Reactions. An Experimental and Theoretical Study. J Org Chem 2013; 78:5851-7. [DOI: 10.1021/jo400415b] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Gonzalo Jiménez-Osés
- Department of Chemistry
and Biochemistry, University of California, Los Angeles, Los Angeles, California 90095-1569, United States
| | - Eugenio Vispe
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - Marta Roldán
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - Sergio Rodríguez-Rodríguez
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - Pilar López-Ram-de-Viu
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - Luis Salvatella
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - José A. Mayoral
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
| | - José M. Fraile
- Instituto de Síntesis
Química y Catálisis Homogénea, Facultad de Ciencias, Universidad de Zaragoza-CSIC, 50009 Zaragoza, Spain
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Kellehan D, Kirby F, Frain D, Rodríguez-García AM, García JI, O’Leary P. AraBOX and XyliBOX based catalysts for cyclopropanations, Diels Alder cycloadditions and allylic additions. ACTA ACUST UNITED AC 2013. [DOI: 10.1016/j.tetasy.2013.04.020] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Lu Q, Yu H, Fu Y. Linear correlation between the C–H activation barrier and the C–Cu/C–H bond dissociation energy gap in Cu-promoted C–H activation of heteroarenes. Chem Commun (Camb) 2013; 49:10847-9. [DOI: 10.1039/c3cc46069j] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Cheng C, Chen D, Wang Z. [3,3] Sigmatropic Rearrangement Versus [2+2] Cycloaddition: A DFT Investigation of Formal SN2′ Substitution of Imido Metal Complexes with Allylic Electrophiles. Chemistry 2012; 19:1204-8. [DOI: 10.1002/chem.201203197] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2012] [Revised: 10/24/2012] [Indexed: 11/07/2022]
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Aguado-Ullate S, Urbano-Cuadrado M, Villalba I, Pires E, García JI, Bo C, Carbó JJ. Predicting the Enantioselectivity of the Copper-Catalysed Cyclopropanation of Alkenes by Using Quantitative Quadrant-Diagram Representations of the Catalysts. Chemistry 2012; 18:14026-36. [DOI: 10.1002/chem.201201135] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2012] [Revised: 07/16/2012] [Indexed: 11/08/2022]
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Tzimopoulos D, Brenna S, Czapik A, Gdaniec M, Ardizzoia A, Akrivos PD. Investigation of the structure and catalytic activity in olefin cyclopropanation of neutral and cationic dicopper complexes of 3,5-bis(pyridinylimino)benzoic acid. Inorganica Chim Acta 2012. [DOI: 10.1016/j.ica.2011.10.055] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
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