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Nazarova AL, Zayat B, Fokin VV, Narayan SR. Electrochemical Studies of the Cycloaddition Activity of Bismuth(III) Acetylides Towards Organic Azides Under Copper(I)-Catalyzed Conditions. Front Chem 2022; 10:830237. [PMID: 36204144 PMCID: PMC9531323 DOI: 10.3389/fchem.2022.830237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Accepted: 01/13/2022] [Indexed: 11/21/2022] Open
Abstract
Time-dependent monitoring of the reactive intermediates provides valuable information about the mechanism of a synthetic transformation. However, the process frequently involves intermediates with short lifetimes that significantly challenge the accessibility of the desired kinetic data. We report in situ cyclic voltammetry (CV) and nuclear magnetic resonance (NMR) spectroscopy studies of the cycloaddition reaction of organobismuth(III) compounds with organic azides under the copper(I)-catalyzed conditions. A series of bismuth(III) acetylides carrying diphenyl sulfone scaffolds have been synthesized to study the underlying electronic and steric effects of the tethered moieties capable of transannular oxygen O···Bi interactions and para-functionality of the parent phenylacetylene backbones. While belonging to the family of copper-catalyzed azide-alkyne cycloaddition reactions, the reaction yielding 5-bismuth(III)-triazolide is the sole example of a complex catalytic transformation that features activity of bismuth(III) acetylides towards organic azides under copper(I)-catalyzed conditions. Stepwise continuous monitoring of the copper(I)/copper(0) redox activity of the copper(I) catalyst by cyclic voltammetry provided novel insights into the complex catalytic cycle of the bismuth(III)-triazolide formation. From CV-derived kinetic data, reaction rate parameters of the bismuth(III) acetylides coordination to the copper(I) catalyst (KA) and equilibrium concentration of the copper species [cat]eq. are compared with the overall 5-bismuth(III)-triazolide formation rate constant kobs obtained by 1H-NMR kinetic analysis.
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Affiliation(s)
- Antonina L. Nazarova
- Department of Chemistry, Loker Hydrocarbon Research Institute, University of Southern California, Los Angeles, CA, United States
- Bridge Institute, USC Michelson Center for Convergent Bioscience, University of Southern California, Los Angeles, CA, United States
| | - Billal Zayat
- Department of Chemistry, Loker Hydrocarbon Research Institute, University of Southern California, Los Angeles, CA, United States
| | - Valery V. Fokin
- Department of Chemistry, Loker Hydrocarbon Research Institute, University of Southern California, Los Angeles, CA, United States
- Bridge Institute, USC Michelson Center for Convergent Bioscience, University of Southern California, Los Angeles, CA, United States
- *Correspondence: Valery V. Fokin, ; Sri R. Narayan,
| | - Sri R. Narayan
- Department of Chemistry, Loker Hydrocarbon Research Institute, University of Southern California, Los Angeles, CA, United States
- *Correspondence: Valery V. Fokin, ; Sri R. Narayan,
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De Leger W, Adriaensen K, Robeyns K, Van Meervelt L, Thomas J, Meijers B, Smet M, Dehaen W. Synthesis and post-functionalization of alternate-linked- meta-para-[2 n .1 n ]thiacyclophanes. Beilstein J Org Chem 2018; 14:2190-2197. [PMID: 30202471 PMCID: PMC6122333 DOI: 10.3762/bjoc.14.192] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 07/31/2018] [Indexed: 11/23/2022] Open
Abstract
In recent decades, considerable research attention has been devoted to new synthetic procedures for thiacyclophanes. Thiacyclophanes are widely used as host molecules for the molecular recognition of organic compounds as well as metals. Herein, we report the selective and high-yielding synthesis of novel alternate-linked-meta-para-thiacyclophanes. These novel thiacyclophanes are selectively synthesized in high-yielding procedures. Furthermore, post-functionalization of the phenolic moieties was successfully performed. The 3D structure of the alternate-linked-meta-para-[22.12]thiacyclophane was further elucidated via X-ray crystallographic analysis.
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Affiliation(s)
- Wout De Leger
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Koen Adriaensen
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Place Louis Pasteur 1, B-1348 Louvain-la-Neuve, Belgium
| | - Luc Van Meervelt
- Biomolecular Architecture, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Joice Thomas
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Björn Meijers
- Laboratory of Nephrology, Department of Immunology and Microbiology, KU Leuven, Herestraat 49, B-3000 Leuven, Belgium.,Department of Nephrology and Renal Transplantation, University Hospitals Leuven, Herestraat 49, B-3000 Leuven, Belgium
| | - Mario Smet
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Wim Dehaen
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
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García-Morales L, González-González L, Querol E, Piñol J. A minimized motile machinery forMycoplasma genitalium. Mol Microbiol 2016; 100:125-38. [DOI: 10.1111/mmi.13305] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/07/2015] [Indexed: 01/29/2023]
Affiliation(s)
- Luis García-Morales
- Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular; Universitat Autònoma de Barcelona; 08193 Bellaterra Barcelona Spain
| | - Luis González-González
- Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular; Universitat Autònoma de Barcelona; 08193 Bellaterra Barcelona Spain
| | | | - Jaume Piñol
- Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular; Universitat Autònoma de Barcelona; 08193 Bellaterra Barcelona Spain
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Thomas J, Dobrzańska L, Van Meervelt L, Quevedo MA, Woźniak K, Stachowicz M, Smet M, Maes W, Dehaen W. Homodiselenacalix[4]arenes: Molecules with Unique Channelled Crystal Structures. Chemistry 2015; 22:979-87. [DOI: 10.1002/chem.201503385] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2015] [Indexed: 12/20/2022]
Affiliation(s)
- Joice Thomas
- Molecular Design and Synthesis; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
| | - Liliana Dobrzańska
- Molecular Design and Synthesis; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
| | - Luc Van Meervelt
- Biomolecular Architecture; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
| | - Mario Alfredo Quevedo
- Unidad de Investigación y Desarrollo en Tecnología Farmacéutica; CONICET. Departamento de Farmacia; Universidad Nacional de Córdoba; Córdoba Argentina
| | - Krzysztof Woźniak
- Department of Chemistry; Warsaw University; Pasteura 1 02-093 Warsaw Poland
| | - Marcin Stachowicz
- Department of Chemistry; Warsaw University; Pasteura 1 02-093 Warsaw Poland
| | - Mario Smet
- Molecular Design and Synthesis; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
| | - Wouter Maes
- Molecular Design and Synthesis; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
- Design and Synthesis of Organic Semiconductors (DSOS); Institute for Materials Research (IMO-IMOMEC); Hasselt University; Agoralaan 1-Building D 3590 Diepenbeek Belgium
| | - Wim Dehaen
- Molecular Design and Synthesis; Department of Chemistry; KU Leuven; Celestijnenlaan 200F 3001 Heverlee Belgium
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Sonawane MP, Boodts S, Thomas J, Dehaen W. Synthesis and metal complexation studies of [2 n ]thiacalix[ m]arene[ m]pyrazine. Supramol Chem 2014. [DOI: 10.1080/10610278.2013.868898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Mahendra P. Sonawane
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Stijn Boodts
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Joice Thomas
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Wim Dehaen
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
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Thomas J, Dobrzańska L, Sonawane MP, Smet M, Maes W, Dehaen W. Synthetic protocols towards homodithiacalix[n]arenes. Supramol Chem 2014. [DOI: 10.1080/10610278.2013.875173] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Joice Thomas
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Liliana Dobrzańska
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Mahendra Punjaji Sonawane
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Mario Smet
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Wouter Maes
- Design & Synthesis of Organic Semiconductors (DSOS), Institute for Materials Research (IMO-IMOMEC), Hasselt University, Universitaire Campus, Agoralaan 1 – Building D, 3590 Diepenbeek, Belgium
| | - Wim Dehaen
- Molecular Design and Synthesis, Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
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Ma YX, Han Y, Chen CF. Triptycene-derived calixarenes, heterocalixarenes and analogues. J INCL PHENOM MACRO 2013. [DOI: 10.1007/s10847-013-0372-4] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Thomas J, Reekmans G, Adriaensens P, Van Meervelt L, Smet M, Maes W, Dehaen W, Dobrzańska L. Actuated Conformational Switching in a Single Crystal of a Homodithiacalix[4]arene. Angew Chem Int Ed Engl 2013; 52:10237-40. [DOI: 10.1002/anie.201302822] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2013] [Revised: 06/05/2013] [Indexed: 11/10/2022]
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Thomas J, Reekmans G, Adriaensens P, Van Meervelt L, Smet M, Maes W, Dehaen W, Dobrzańska L. Actuated Conformational Switching in a Single Crystal of a Homodithiacalix[4]arene. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201302822] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Van Rossom W, Thomas J, Terentyeva TG, Maes W, Dehaen W. Selenacalix[3]triazines: Anion Versus Proton Association. European J Org Chem 2013. [DOI: 10.1002/ejoc.201201548] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Xie T, Hu SZ, Chen CF. Triptycene-Derived Homooxacalixarene Analogues: Synthesis, Structures, and Complexation with Fullerenes C60 and C70. J Org Chem 2013; 78:981-7. [DOI: 10.1021/jo302459m] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Tao Xie
- Beijing National Laboratory for Molecular
Sciences, CAS Key Laboratory of Molecular Recognition and Function,
Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shu-Zhen Hu
- Beijing National Laboratory for Molecular
Sciences, CAS Key Laboratory of Molecular Recognition and Function,
Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular
Sciences, CAS Key Laboratory of Molecular Recognition and Function,
Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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Sonawane MP, Van Hecke K, Jacobs J, Thomas J, Van Meervelt L, Dehaen W, Van Rossom W. Synthetic and Structural Exploration of [24]Tetrathiacalix[2]arene[2]pyrimidines. J Org Chem 2012; 77:8444-50. [DOI: 10.1021/jo301321w] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
| | - Kristof Van Hecke
- Department of Inorganic and Physical Chemistry, Universiteit Gent, Krijgslaan 281, Building S3, 9000
Gent, Belgium
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Thomas J, Dobrzańska L, Van Hecke K, Sonawane MP, Robeyns K, Van Meervelt L, Woźniak K, Smet M, Maes W, Dehaen W. Homoselenacalix[4]arenes: synthetic exploration and metallosupramolecular chemistry. Org Biomol Chem 2012; 10:6526-36. [DOI: 10.1039/c2ob25760b] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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