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Bettens T, Hoffmann M, Alonso M, Geerlings P, Dreuw A, De Proft F. Mechanochemically Triggered Topology Changes in Expanded Porphyrins. Chemistry 2021; 27:3397-3406. [PMID: 33170967 PMCID: PMC7898923 DOI: 10.1002/chem.202003869] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Indexed: 12/16/2022]
Abstract
A hitherto unexplored class of molecules for molecular force probe applications are expanded porphyrins. This work proves that mechanical force is an effective stimulus to trigger the interconversion between Hückel and Möbius topologies in [28]hexaphyrin, making these expanded porphyrins suitable to act as conformational mechanophores operating at mild (sub-1 nN) force conditions. A straightforward approach based on distance matrices is proposed for the selection of pulling scenarios that promote either the planar Hückel topology or the three lowest lying Möbius topologies. This approach is supported by quantum mechanochemical calculations. Force distribution analyses reveal that [28]hexaphyrin selectively allocates the external mechanical energy to molecular regions that trigger Hückel-Möbius interconversions, explaining why certain pulling scenarios favor the Hückel two-sided topology and others favor Möbius single-sided topologies. The meso-substitution pattern on [28]hexaphyrin determines whether the energy difference between the different topologies can be overcome by mechanical activation.
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Affiliation(s)
- Tom Bettens
- Eenheid Algemene Chemie (ALGC)Vrije Universiteit Brussel (VUB)Pleinlaan 21050BrusselsBelgium
| | - Marvin Hoffmann
- Interdisciplinary Center for Scientific ComputingRuprecht-Karls UniversityIm Neuenheimer Feld 205A69120HeidelbergGermany
| | - Mercedes Alonso
- Eenheid Algemene Chemie (ALGC)Vrije Universiteit Brussel (VUB)Pleinlaan 21050BrusselsBelgium
| | - Paul Geerlings
- Eenheid Algemene Chemie (ALGC)Vrije Universiteit Brussel (VUB)Pleinlaan 21050BrusselsBelgium
| | - Andreas Dreuw
- Interdisciplinary Center for Scientific ComputingRuprecht-Karls UniversityIm Neuenheimer Feld 205A69120HeidelbergGermany
| | - Frank De Proft
- Eenheid Algemene Chemie (ALGC)Vrije Universiteit Brussel (VUB)Pleinlaan 21050BrusselsBelgium
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2
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Borges-Martínez M, Montenegro-Pohlhammer N, Cárdenas-Jirón G. The bimetallic and the anchoring group effects on both optical and charge transport properties of hexaphyrin amethyrin. NEW J CHEM 2021. [DOI: 10.1039/d1nj00091h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Bimetallic Cu(ii)-hexaphyrin amethyrin proposed as a molecular switch operated by the application of an external magnetic field.
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Affiliation(s)
- Merlys Borges-Martínez
- Laboratory of Theoretical Chemistry
- Faculty of Chemistry and Biology, University of Santiago de Chile (USACH)
- Santiago
- Chile
| | - Nicolás Montenegro-Pohlhammer
- Laboratory of Theoretical Chemistry
- Faculty of Chemistry and Biology, University of Santiago de Chile (USACH)
- Santiago
- Chile
| | - Gloria Cárdenas-Jirón
- Laboratory of Theoretical Chemistry
- Faculty of Chemistry and Biology, University of Santiago de Chile (USACH)
- Santiago
- Chile
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3
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How do the Hückel and Baird Rules Fade away in Annulenes? Molecules 2020; 25:molecules25030711. [PMID: 32045990 PMCID: PMC7037833 DOI: 10.3390/molecules25030711] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 01/27/2020] [Accepted: 01/29/2020] [Indexed: 01/27/2023] Open
Abstract
Two of the most popular rules to characterize the aromaticity of molecules are those due to Hückel and Baird, which govern the aromaticity of singlet and triplet states. In this work, we study how these rules fade away as the ring structure increases and an optimal overlap between p orbitals is no longer possible due to geometrical restrictions. To this end, we study the lowest-lying singlet and triplet states of neutral annulenes with an even number of carbon atoms between four and eighteen. First of all, we analyze these rules from the Hückel molecular orbital method and, afterwards, we perform a geometry optimization of the annulenes with several density functional approximations in order to analyze the effect that the distortions from planarity produce on the aromaticity of annulenes. Finally, we analyze the performance of three density functional approximations that employ different percentages of Hartree-Fock exchange (B3LYP, CAM-B3LYP and M06-2X) and Hartree-Fock. Our results reveal that functionals with a low percentage of Hartree-Fock exchange at long ranges suffer from severe delocalization errors that result in wrong geometrical structures and the overestimation of the aromatic character of annulenes.
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Higashino T, Kumagai A, Sakaki S, Imahori H. Reversible π-system switching of thiophene-fused thiahexaphyrins by solvent and oxidation/reduction. Chem Sci 2018; 9:7528-7539. [PMID: 30319753 PMCID: PMC6179095 DOI: 10.1039/c8sc02448k] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2018] [Accepted: 08/07/2018] [Indexed: 12/23/2022] Open
Abstract
The concept of chemical topology has generated considerable interest among chemists and one of the state-of-the-art topics is Möbius topology in cyclic π-conjugated molecules. In this regard, expanded porphyrins have been extensively studied because of their facile topological interconversions and attractive optoelectronic properties. A typical example involves [28]hexaphyrins: they show topological conversion between planar Hückel and twisted Möbius topologies owing to their flexible structure. With this in mind, we designed a [28]hexaphyrin where one dimethine pyrrole unit was replaced with dithieno[3,4-b:3',4'-d]thiophene (β-DTT), aiming at a reversible switching between macrocyclic and cross-conjugated π-systems by a change in molecular topologies. Considering that the β-DTT unit can offer both macrocyclic and cross-conjugated π-circuits, we envisioned that a combination of the topological interconversion of [28]hexaphyrin with the two π-circuits of the β-DTT unit would enable a reversible switching between macrocyclic and cross-conjugated π-circuits on Möbius and Hückel topologies, respectively, by a simple conformational change. Unexpectedly, the hexaphyrin revealed a unique, unprecedented π-system switching between a Möbius cross-conjugated π-system and a Hückel antiaromatic π-system, which was fully supported by both experimental and theoretical investigations. Meanwhile, the [28]hexaphyrin was also found to be redox interconvertible with the corresponding [26]hexaphyrin with a Hückel cross-conjugated π-system. These results demonstrate that the β-DTT unit is a new effective motif to realize π-system switching by changing molecular and π-system topologies. Importantly, external stimuli, i.e., solvent, as well as oxidation/reduction can be used to trigger the topological changes in expanded porphyrins with the help of the β-DTT unit.
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Affiliation(s)
- Tomohiro Higashino
- Department of Molecular Engineering , Graduate School of Engineering , Kyoto University , Nishikyo-ku , Kyoto 615-8510 , Japan . ;
| | - Atsushi Kumagai
- Department of Molecular Engineering , Graduate School of Engineering , Kyoto University , Nishikyo-ku , Kyoto 615-8510 , Japan . ;
| | - Shigeyoshi Sakaki
- Fukui Institute for Fundamental Chemistry , Kyoto University , Sakyo-ku , Kyoto 606-8103 , Japan
| | - Hiroshi Imahori
- Department of Molecular Engineering , Graduate School of Engineering , Kyoto University , Nishikyo-ku , Kyoto 615-8510 , Japan . ;
- Institute for Integrated Cell-Material Sciences (WPI-iCeMS) , Kyoto University , Sakyo-ku , Kyoto 606-8501 , Japan
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5
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Stuyver T, Perrin M, Geerlings P, De Proft F, Alonso M. Conductance Switching in Expanded Porphyrins through Aromaticity and Topology Changes. J Am Chem Soc 2018; 140:1313-1326. [DOI: 10.1021/jacs.7b09464] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Thijs Stuyver
- Department
of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium
| | - Mickael Perrin
- Kavli
Institute of Nanoscience, Delft University of Technology, Lorentzweg
1, 2628 CJ Delft, The Netherlands
- Swiss Federal Laboratories for Materials Science and Technology, Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - Paul Geerlings
- Department
of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium
| | - Frank De Proft
- Department
of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium
| | - Mercedes Alonso
- Department
of General Chemistry (ALGC), Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050 Brussels, Belgium
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6
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Casademont-Reig I, Woller T, Contreras-García J, Alonso M, Torrent-Sucarrat M, Matito E. New electron delocalization tools to describe the aromaticity in porphyrinoids. Phys Chem Chem Phys 2018; 20:2787-2796. [DOI: 10.1039/c7cp07581b] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
There are several possible pathways in the macrocycle of large porphyrinoids and, among aromaticity indices, only AVminis capable of recognizing the most aromatic one.
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Affiliation(s)
- Irene Casademont-Reig
- Kimika Fakultatea
- Euskal Herriko Unibertsitatea (UPV/EHU)
- and Donostia International Physics Center (DIPC)
- P.K. 1072
- 20080 Donostia
| | - Tatiana Woller
- Eenheid Algemene Chemie (ALGC). Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
| | - Julia Contreras-García
- Sorbonne Universités, UPMC Univ. Paris
- UMR 7616 Laboratoire de Chimie Théorique
- CNRS
- UMR 7616
- Paris
| | - Mercedes Alonso
- Eenheid Algemene Chemie (ALGC). Vrije Universiteit Brussel (VUB)
- Pleinlaan 2
- 1050 Brussels
- Belgium
| | - Miquel Torrent-Sucarrat
- Kimika Fakultatea
- Euskal Herriko Unibertsitatea (UPV/EHU)
- and Donostia International Physics Center (DIPC)
- P.K. 1072
- 20080 Donostia
| | - Eduard Matito
- Kimika Fakultatea
- Euskal Herriko Unibertsitatea (UPV/EHU)
- and Donostia International Physics Center (DIPC)
- P.K. 1072
- 20080 Donostia
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7
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Torrent-Sucarrat M, Navarro S, Cossío FP, Anglada JM, Luis JM. Relevance of the DFT method to study expanded porphyrins with different topologies. J Comput Chem 2017; 38:2819-2828. [DOI: 10.1002/jcc.25074] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2017] [Revised: 08/03/2017] [Accepted: 09/07/2017] [Indexed: 12/14/2022]
Affiliation(s)
- Miquel Torrent-Sucarrat
- Department of Organic Chemistry I; Universidad del País Vasco - Euskal Herriko Unibertsitatea (UPV/EHU) and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Manuel Lardizabal Ibilbidea 3; San Sebastian Donostia 20018 Spain
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4; San Sebastián/Donostia 20018 Spain
- Ikerbasque, Basque Foundation for Science, María Díaz de Haro, 3, 6°; Bilbao 48013 Spain
| | - Sara Navarro
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona; Girona Catalonia E-17071 Spain
| | - Fernando P. Cossío
- Department of Organic Chemistry I; Universidad del País Vasco - Euskal Herriko Unibertsitatea (UPV/EHU) and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Manuel Lardizabal Ibilbidea 3; San Sebastian Donostia 20018 Spain
- Donostia International Physics Center (DIPC), Manuel Lardizabal Ibilbidea 4; San Sebastián/Donostia 20018 Spain
| | - Josep M. Anglada
- Departament de Química Biològica i Modelització Molecular; Institut de Química Avançada de Catalunya (IQAC-CSIC), c/Jordi Girona 18; Barcelona E-08034 Spain
| | - Josep M. Luis
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona; Girona Catalonia E-17071 Spain
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8
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Vogel A, Dechert S, Brückner C, Meyer F. Reaching across the Divide: How Monometalation of One Binding Pocket Affects the Empty Binding Pocket in a Siamese-Twin Porphyrin Palladium Complex. Inorg Chem 2017; 56:2221-2232. [PMID: 28165234 DOI: 10.1021/acs.inorgchem.6b02916] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Siamese-twin porphyrin is a pyrazole-containing expanded porphyrin incorporating two porphyrin-like binding pockets. The macrocycle, however, does not possess an aromatic π system but rather two separated conjugation pathways that are isolated by the pyrazole junctions. Mono- and bimetallic complexes of the Siamese-twin porphyrin are known. This work addresses in detail the electronic consequences that monometalation (with PdII) has on the electronic properties of the nonmetalated binding pocket by studying the solid-state structure, acid/base, and electrochemical properties of the monopalladium twin-porphyrin complex. Specifically, metalation leads to a switch of the protonation sites of the free-base pocket. The unusual location of the protons at adjacent pyrrolic nitrogen atoms was revealed using X-ray diffraction and 1D/2D NMR spectroscopy. The one-electron oxidation and reduction events are both ligand-centered, as derived by spectroelectrochemical and electron paramagnetic resonance measurements, but are located on different halves of the molecule. Single-electron oxidation (-0.32 V vs Fc/Fc+) generated an organic radical centered on the metal-coordinating side of the ligand, while single-electron reduction (-1.59 V vs Fc/Fc+) led to the formation of an organic radical on the free-base side of the macrocycle. Density functional theory calculations corroborated the redox chemistry observed. The possibility of selectively preparing the monometallic complexes carrying two distinct redox sites-a metal-containing oxidation site and a metal-free reduction site-further expands the potential of Siamese-twin porphyrins to serve as an adjustable platform for multielectron redox processes in chemical catalysis or molecular electronics applications.
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Affiliation(s)
- Anastasia Vogel
- Institut für Anorganische Chemie, Georg-August-Universität Göttingen , Tammannstraße 4, 37077 Göttingen, Germany
| | - Sebastian Dechert
- Institut für Anorganische Chemie, Georg-August-Universität Göttingen , Tammannstraße 4, 37077 Göttingen, Germany
| | - Christian Brückner
- Department of Chemistry, Unit 3060, University of Connecticut , Storrs, Connecticut 06269-3060, Unites States
| | - Franc Meyer
- Institut für Anorganische Chemie, Georg-August-Universität Göttingen , Tammannstraße 4, 37077 Göttingen, Germany
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9
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Mallick A, Oh J, Majewski MA, Stępień M, Kim D, Rath H. Protonation Dependent Topological Dichotomy of Core Modified Hexaphyrins: Synthesis, Characterization, and Excited State Dynamics. J Org Chem 2016; 82:556-566. [DOI: 10.1021/acs.joc.6b02576] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Abhijit Mallick
- Department of Inorganic
Chemistry, Indian Association for the Cultivation of Science, 2A/2B Raja
S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Juwon Oh
- Department
of Chemistry, Yonsei University, Seodaemun-gu, Seoul 120-749, Korea
| | - Marcin A. Majewski
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Marcin Stępień
- Wydział Chemii, Uniwersytet Wrocławski, ul. F. Joliot-Curie 14, 50-383 Wrocław, Poland
| | - Dongho Kim
- Department
of Chemistry, Yonsei University, Seodaemun-gu, Seoul 120-749, Korea
| | - Harapriya Rath
- Department of Inorganic
Chemistry, Indian Association for the Cultivation of Science, 2A/2B Raja
S. C. Mullick Road, Jadavpur, Kolkata 700032, India
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10
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Tanaka T, Osuka A. Chemistry of meso-Aryl-Substituted Expanded Porphyrins: Aromaticity and Molecular Twist. Chem Rev 2016; 117:2584-2640. [DOI: 10.1021/acs.chemrev.6b00371] [Citation(s) in RCA: 283] [Impact Index Per Article: 35.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Takayuki Tanaka
- Department of Chemistry,
Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
| | - Atsuhiro Osuka
- Department of Chemistry,
Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
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11
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Abstract
We introduce a new electronic aromaticity index, AV1245, consisting of an average of the 4-center indices along the ring that keep a positional relationship of 1, 2, 4, 5.
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Affiliation(s)
- Eduard Matito
- Faculty of Chemistry
- University of the Basque Country UPV/EHU
- and Donostia International Physics Center (DIPC)
- 20080 Donostia
- Spain
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12
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Woller T, Contreras-García J, Geerlings P, De Proft F, Alonso M. Understanding the molecular switching properties of octaphyrins. Phys Chem Chem Phys 2016; 18:11885-900. [DOI: 10.1039/c5cp07413d] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Triggering Hückel–Möbius topological and aromaticity switches in octaphyrins by protonation and redox reactions.
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Affiliation(s)
- T. Woller
- Eenheid Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- 1050 Brussels
- Belgium
| | - J. Contreras-García
- Sorbonne Universités
- UPMC Univ Paris 06
- UMR 7616
- Laboratoire de Chimie Théorique
- Paris
| | - P. Geerlings
- Eenheid Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- 1050 Brussels
- Belgium
| | - Frank De Proft
- Eenheid Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- 1050 Brussels
- Belgium
| | - M. Alonso
- Eenheid Algemene Chemie (ALGC)
- Vrije Universiteit Brussel (VUB)
- 1050 Brussels
- Belgium
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