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Alić J, Biljan I, Štefanić Z, Šekutor M. Preparation and characterization of non-aromatic ether self-assemblies on a HOPG surface. NANOTECHNOLOGY 2022; 33:355603. [PMID: 35545006 DOI: 10.1088/1361-6528/ac6e72] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
On-surface self-assemblies of aromatic organic molecules have been widely investigated, but the characterization of analogous self-assemblies consisting of fully sp3-hybridized molecules remains challenging. The possible on-surface orientations of alkyl molecules not exclusively comprised of long alkyl chains are difficult to distinguish because of their inherently low symmetry and non-planar nature. Here, we present a detailed study of diamondoid ethers, structurally rigid and fully saturated molecules, which form uniform 2D monolayers on a highly oriented pyrolytic graphite (HOPG) surface. Using scanning tunneling microscopy, various computational tools, and x-ray structural analysis, we identified the most favorable on-surface orientations of these rigid ethers and accounted for the forces driving the self-organization process. The influence of the oxygen atom and London dispersion interactions were found to be responsible for the formation of the observed highly ordered 2D ether assemblies. Our findings provide insight into the on-surface properties and behavior of non-aromatic organic compounds and broaden our understanding of the phenomena characteristic of monolayers consisting of non-planar molecules.
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Affiliation(s)
- Jasna Alić
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
| | - Ivana Biljan
- Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, 10 000 Zagreb, Croatia
| | - Zoran Štefanić
- Department of Physical Chemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
| | - Marina Šekutor
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
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Han D, Zhu J. Surface-assisted fabrication of low-dimensional carbon-based nanoarchitectures. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2021; 33:343001. [PMID: 34111858 DOI: 10.1088/1361-648x/ac0a1b] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Accepted: 06/10/2021] [Indexed: 06/12/2023]
Abstract
On-surface synthesis, as an alternative to traditional in-solution synthesis, has become an emerging research field and attracted extensive attention over the past decade due to its ability to fabricate nanoarchitectures with exotic properties. Compared to wet chemistry, the on-surface synthesis conducted on atomically flat solid surfaces under ultrahigh vacuum exhibits unprecedented characteristics and advantages, opening novel reaction pathways for chemical synthesis. Various low-dimensional nanostructures have been fabricated on solid surfaces (mostly metal surfaces) based on this newly developed approach. This paper reviews the classic and latest works regarding carbon-based low-dimensional nanostructures since the arrival of on-surface synthesis era. These nanostructures are categorized into zero-, one- and two-dimensional classes and each class is composed of numerous sub-nanostructures. For certain specific nanostructures, comprehensive reports are given, including precursor design, substrate choice, synthetic strategies and so forth. We hope that our review will shed light on the fabrication of some significant nanostructures in this young and promising scientific area.
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Affiliation(s)
- Dong Han
- National Synchrotron Radiation Laboratory, Department of Chemical Physics, University of Science and Technology of China, Hefei 230029, People's Republic of China
| | - Junfa Zhu
- National Synchrotron Radiation Laboratory, Department of Chemical Physics, University of Science and Technology of China, Hefei 230029, People's Republic of China
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Fang Y, Cibian M, Hanan GS, Perepichka DF, De Feyter S, Cuccia LA, Ivasenko O. Alkyl chain length effects on double-deck assembly at a liquid/solid interface. NANOSCALE 2018; 10:14993-15002. [PMID: 30052249 DOI: 10.1039/c8nr04220a] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Controlled double-deck packing is an appealing means to expand upon conventional 2D self-assembly which is critical in crystal engineering, yet it is rare and poorly understood. Herein, we report the first systematic study of double-deck assembly in a series of alkylated aminoquinone derivatives at the liquid-solid interface. The competition between the fraction of alkyl chains adsorbed on the surface and the optimal conformation of the alkyl chains near the head group leads to a stepwise structural transformation ranging from complete double-deck packing to complete monolayer packing. Alkyl chains on the bottom or top layer of the double-deck assemblies were selectively visualized by carefully tuning the scanning tunneling microscopy settings. A method to easily identify mirror image domains was discovered based on the coincidence of domain boundaries with a graphite main axis. The effect of molecular symmetry and metal complexation on the formation of the double-deck assembly was also explored. Based on 2D crystal engineering principles, this bottom-up double-deck assembly can potentially provide an essential toehold for constructing precise 3D hierarchical structures.
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Affiliation(s)
- Yuan Fang
- Department of Chemistry and Biochemistry, Concordia University, 7141 Sherbrooke St. W., Montreal, Québec H4B 1R6, Canada.
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Sun Q, Tran BV, Cai L, Ma H, Yu X, Yuan C, Stöhr M, Xu W. On-Surface Formation of Cumulene by Dehalogenative Homocoupling of Alkenyl gem
-Dibromides. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201706104] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Qiang Sun
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
| | - Bay V. Tran
- Zernike Institute for Advanced Materials; University of Groningen; Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Liangliang Cai
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
| | - Honghong Ma
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
| | - Xin Yu
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
| | - Chunxue Yuan
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
| | - Meike Stöhr
- Zernike Institute for Advanced Materials; University of Groningen; Nijenborgh 4 9747 AG Groningen The Netherlands
| | - Wei Xu
- Interdisciplinary Materials Research Center; Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials; College of Materials Science and Engineering; Tongji University; Shanghai 201804 P. R. China
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Sun Q, Tran BV, Cai L, Ma H, Yu X, Yuan C, Stöhr M, Xu W. On-Surface Formation of Cumulene by Dehalogenative Homocoupling of Alkenyl gem-Dibromides. Angew Chem Int Ed Engl 2017; 56:12165-12169. [PMID: 28772061 DOI: 10.1002/anie.201706104] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Indexed: 11/09/2022]
Abstract
The on-surface activation of carbon-halogen groups is an efficient route to produce radicals for constructing various hydrocarbons and carbon nanostructures. To date, the employed halide precursors have only one halogen attached to a carbon atom. It is thus of interest to study the effect of attaching more than one halogen atom to a carbon atom with the aim of producing multiple unpaired electrons. By introducing an alkenyl gem-dibromide, cumulene products were fabricated on a Au(111) surface by dehalogenative homocoupling reactions. The reaction products and pathways were unambiguously characterized by a combination of high-resolution scanning tunneling microscopy and non-contact atomic force microscopy measurements together with density functional calculations. This study further supplements the database of on-surface synthesis strategies and provides a facile manner for incorporation of more complicated carbon scaffolds into surface nanostructures.
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Affiliation(s)
- Qiang Sun
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
| | - Bay V Tran
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, The Netherlands
| | - Liangliang Cai
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
| | - Honghong Ma
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
| | - Xin Yu
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
| | - Chunxue Yuan
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
| | - Meike Stöhr
- Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, The Netherlands
| | - Wei Xu
- Interdisciplinary Materials Research Center, Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University, Shanghai, 201804, P. R. China
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On-surface synthesis of aligned functional nanoribbons monitored by scanning tunnelling microscopy and vibrational spectroscopy. Nat Commun 2017; 8:14735. [PMID: 28368038 PMCID: PMC5382267 DOI: 10.1038/ncomms14735] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2016] [Accepted: 01/26/2017] [Indexed: 01/12/2023] Open
Abstract
In the blooming field of on-surface synthesis, molecular building blocks are designed to self-assemble and covalently couple directly on a well-defined surface, thus allowing the exploration of unusual reaction pathways and the production of specific compounds in mild conditions. Here we report on the creation of functionalized organic nanoribbons on the Ag(110) surface. C–H bond activation and homo-coupling of the precursors is achieved upon thermal activation. The anisotropic substrate acts as an efficient template fostering the alignment of the nanoribbons, up to the full monolayer regime. The length of the nanoribbons can be sequentially increased by controlling the annealing temperature, from dimers to a maximum length of about 10 nm, limited by epitaxial stress. The different structures are characterized by room-temperature scanning tunnelling microscopy. Distinct signatures of the covalent coupling are measured with high-resolution electron energy loss spectroscopy, as supported by density functional theory calculations. On-surface synthesis, in which molecular units assemble and couple on a defined surface, can access rare reaction pathways and products. Here, the authors synthesize functionalized organic nanoribbons on the Ag(110) surface, and monitor the evolution of the covalent reactions by an unorthodox vibrational spectroscopy approach.
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Zhang J, Chang CR, Yang B, Cao N, Peng C, Zhang H, Tang DTD, Glorius F, Erker G, Fuchs H, Li Q, Chi L. Step-Edge Assisted Direct Linear Alkane Coupling. Chemistry 2017; 23:6185-6189. [DOI: 10.1002/chem.201605744] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Junjie Zhang
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Chun-ran Chang
- Institute of Industrial Catalysis; School of Chemical Engineering and Technology; Xi'an Jiaotong University; Xi'an 710049 P. R. China
| | - Biao Yang
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Nan Cao
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Chencheng Peng
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Haiming Zhang
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Dan-Tam D. Tang
- Organisch-Chemisches Institut; Universiät Münster; Corrensstrasse 40 48149 Münster Germany
| | - Frank Glorius
- Organisch-Chemisches Institut; Universiät Münster; Corrensstrasse 40 48149 Münster Germany
| | - Gerhard Erker
- Organisch-Chemisches Institut; Universiät Münster; Corrensstrasse 40 48149 Münster Germany
| | - Harald Fuchs
- Physikalisches Institut; Universiät Münster; Corrensstrasse 40 48149 Münster Germany
| | - Qing Li
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
| | - Lifeng Chi
- Institute of Functional Nano and Soft Materials (FUNSOM); Jiangsu Key Laboratory for Carbon-Based Functional Materials &devices; Soochow University; Suzhou 215123 P. R. China
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Sun Q, Cai L, Ma H, Yuan C, Xu W. Dehalogenative Homocoupling of Terminal Alkynyl Bromides on Au(111): Incorporation of Acetylenic Scaffolding into Surface Nanostructures. ACS NANO 2016; 10:7023-30. [PMID: 27326451 DOI: 10.1021/acsnano.6b03048] [Citation(s) in RCA: 117] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
On-surface C-C coupling reactions of molecular precursors with alkynyl functional groups demonstrate great potential for the controllable fabrication of low-dimensional carbon nanostructures/nanomaterials, such as carbyne, graphyne, and graphdiyne, which demand the incorporation of highly active sp-hybridized carbons. Recently, through a dehydrogenative homocoupling reaction of alkynes, the possibility was presented to fabricate surface nanostructures involving acetylenic linkages, while problems lie in the fact that different byproducts are inevitably formed when triggering the reactions at elevated temperatures. In this work, by delicately designing the molecular precursors with terminal alkynyl bromide, we introduce the dehalogenative homocoupling reactions on the surface. As a result, we successfully achieve the formation of dimer structures, one-dimensional molecular wires and two-dimensional molecular networks with acetylenic scaffoldings on an inert Au(111) surface, where the unexpected C-Au-C organometallic intermediates are also observed. This study further supplements the database of on-surface dehalogenative C-C coupling reactions, and more importantly, it provides us an alternative efficient way for incorporating the acetylenic scaffolding into low-dimensional surface nanostructures.
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Affiliation(s)
- Qiang Sun
- Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University , Caoan Road 4800, Shanghai 201804, People's Republic of China
| | - Liangliang Cai
- Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University , Caoan Road 4800, Shanghai 201804, People's Republic of China
| | - Honghong Ma
- Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University , Caoan Road 4800, Shanghai 201804, People's Republic of China
| | - Chunxue Yuan
- Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University , Caoan Road 4800, Shanghai 201804, People's Republic of China
| | - Wei Xu
- Tongji-Aarhus Joint Research Center for Nanostructures and Functional Nanomaterials, College of Materials Science and Engineering, Tongji University , Caoan Road 4800, Shanghai 201804, People's Republic of China
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