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Zhou L, Chen X, Peng Q, Li Z, Qiao S, Deng G, Liang Y, Lei M, Yang Y. A Cascade C(sp 3)-H Annulation Involving C(alkyl),C(alkyl)-Palladacycle Intermediates. Angew Chem Int Ed Engl 2024; 63:e202412336. [PMID: 39049725 DOI: 10.1002/anie.202412336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2024] [Revised: 07/24/2024] [Accepted: 07/25/2024] [Indexed: 07/27/2024]
Abstract
C-H bond functionalization involving C,C-palladacycle intermediates provides a unique platform for developing novel reactions. However, the vast majority of studies have been limited to the transformations of C(aryl),C-palladacycles. In sharp contrast, catalytic reactions involving C(alkyl),C(alkyl)-palladacycles have rarely been reported. Herein, we disclose an unprecedented cascade C(sp3)-H annulation involving C(alkyl),C(alkyl)-palladacycles. In this protocol, alkene-tethered cycloalkenyl bromides undergo intramolecular Heck/C(sp3)-H activation to generate C(alkyl),C(alkyl)-palladacycles, which can be captured by α-bromoacrylic acids to afford tricyclic fused pyridinediones. In addition, this strategy can also be applied to indole-tethered cycloalkenyl bromides to construct pentacyclic fused pyridinediones via suquential Heck dearomatization/C(sp3)-H activation/decarboxylative cyclization. Notably, the removal of α-bromoacrylic acids in the reaction of alkene-tethered cycloalkenyl bromides can build an interesting tricyclic skeleton containing a four-membered ring. Preliminary mechanistic experiments indicate that five-membered C(alkyl),C(alkyl)-palladacycles serve as the key intermediates. Meanwhile, density functional theory (DFT) calculations have provided insights into the reaction pathway.
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Affiliation(s)
- Liwei Zhou
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
- Hunan Provincial Key Laboratory of the TCM Agricultural Biogenomics, College of Pharmacy, Changsha Medical University, Changsha, Hunan, 410219, China
| | - Xiahong Chen
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Qiong Peng
- State Key Laboratory of Chemical Resource Engineering, Institute of Computational Chemistry, College of Chemistry, Beijing University of Chemical Technology, Beijing, 100029, China
| | - Zhiwei Li
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Shujia Qiao
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Guobo Deng
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Yun Liang
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Ming Lei
- State Key Laboratory of Chemical Resource Engineering, Institute of Computational Chemistry, College of Chemistry, Beijing University of Chemical Technology, Beijing, 100029, China
| | - Yuan Yang
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education), National & Local Joint Engineering Laboratory for New Petro-chemical Materials and Fine Utilization of Resources, and Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
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2
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Tsitopoulou M, Clemenceau A, Thesmar P, Baudoin O. 1,4-Pd Migration-Enabled Synthesis of Fused 4-Membered Rings. J Am Chem Soc 2024; 146:18811-18816. [PMID: 38968581 PMCID: PMC11258686 DOI: 10.1021/jacs.4c04701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 07/02/2024] [Accepted: 07/03/2024] [Indexed: 07/07/2024]
Abstract
1,4-Palladium migration has been widely used for the functionalization of remote C-H bonds. However, this mechanism has been limited to aryl halide precursors. This work reports an unprecedented Pd0-catalyzed cyclobutanation protocol producing valuable fused cyclobutanes starting from cycloalkenyl (pseudo)halides. This reaction takes place via alkenyl-to-alkyl 1,4-Pd migration, followed by intramolecular Heck coupling. The method performs best with cyclohexenyl precursors, giving access to a variety of substituted bicyclo[4,2,0]octenes. Reactants containing an N-methyl or methoxy group give rise to fused azetidines or oxetanes, respectively, via the same mechanism. Kinetic and deuterium-labeling studies point to a rate-limiting C(sp3)-H activation step.
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Affiliation(s)
- Maria Tsitopoulou
- Department of Chemistry, University
of Basel, CH-4056 Basel, Switzerland
| | - Antonin Clemenceau
- Department of Chemistry, University
of Basel, CH-4056 Basel, Switzerland
| | - Pierre Thesmar
- Department of Chemistry, University
of Basel, CH-4056 Basel, Switzerland
| | - Olivier Baudoin
- Department of Chemistry, University
of Basel, CH-4056 Basel, Switzerland
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3
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Pal T, Ghosh P, Islam M, Guin S, Maji S, Dutta S, Das J, Ge H, Maiti D. Tandem dehydrogenation-olefination-decarboxylation of cycloalkyl carboxylic acids via multifold C-H activation. Nat Commun 2024; 15:5370. [PMID: 38918374 PMCID: PMC11199700 DOI: 10.1038/s41467-024-49359-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2023] [Accepted: 05/31/2024] [Indexed: 06/27/2024] Open
Abstract
Dehydrogenation chemistry has long been established as a fundamental aspect of organic synthesis, commonly encountered in carbonyl compounds. Transition metal catalysis revolutionized it, with strategies like transfer-dehydrogenation, single electron transfer and C-H activation. These approaches, extended to multiple dehydrogenations, can lead to aromatization. Dehydrogenative transformations of aliphatic carboxylic acids pose challenges, yet engineered ligands and metal catalysis can initiate dehydrogenation via C-H activation, though outcomes vary based on substrate structures. Herein, we have developed a catalytic system enabling cyclohexane carboxylic acids to undergo multifold C-H activation to furnish olefinated arenes, bypassing lactone formation. This showcases unique reactivity in aliphatic carboxylic acids, involving tandem dehydrogenation-olefination-decarboxylation-aromatization sequences, validated by control experiments and key intermediate isolation. For cyclopentane carboxylic acids, reluctant to aromatization, the catalytic system facilitates controlled dehydrogenation, providing difunctionalized cyclopentenes through tandem dehydrogenation-olefination-decarboxylation-allylic acyloxylation sequences. This transformation expands carboxylic acids into diverse molecular entities with wide applications, underscoring its importance.
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Affiliation(s)
- Tanay Pal
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
| | - Premananda Ghosh
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
- IITB-Monash Research Academy, Indian Institute of Technology Bombay, Mumbai, India
| | - Minhajul Islam
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
- IITB-Monash Research Academy, Indian Institute of Technology Bombay, Mumbai, India
| | - Srimanta Guin
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
| | - Suman Maji
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
| | - Suparna Dutta
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
| | - Jayabrata Das
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India
| | - Haibo Ge
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, USA.
| | - Debabrata Maiti
- Department of Chemistry, Indian Institute of Technology Bombay, Mumbai, India.
- IITB-Monash Research Academy, Indian Institute of Technology Bombay, Mumbai, India.
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4
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Salameh N, Minio F, Rossini G, Marrocchi A, Vaccaro L. Waste-minimized C(sp3)-H activation for the preparation of fused N-heterocycles. GREEN SYNTHESIS AND CATALYSIS 2023. [DOI: 10.1016/j.gresc.2023.02.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2023] Open
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5
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Babu SA, Aggarwal Y, Patel P, Tomar R. Diastereoselective palladium-catalyzed functionalization of prochiral C(sp 3)-H bonds of aliphatic and alicyclic compounds. Chem Commun (Camb) 2022; 58:2612-2633. [PMID: 35113087 DOI: 10.1039/d1cc05649b] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
We highlight the reported developments of the palladium-catalyzed C-H activation and functionalization of the inactive/unreactive prochiral C(sp3)-H bonds of aliphatic and alicyclic compounds. There exist numerous classical methods for generating contiguous stereogenic centers in a compound with a high degree of stereocontrol. Along similar lines, the Pd(II)-catalyzed, directing group-aided functionalization of inactive prochiral/diastereotopic C(sp3)-H bonds have been exploited to accomplish the stereoselective construction of stereo-arrays in organic compounds. We present a concise discussion on how specific strategies consisting of Pd(II)-catalyzed, directing group-aided C(sp3)-H functionalization have been utilized to generate two or more stereogenic centers in aliphatic and alicyclic compounds.
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Affiliation(s)
- Srinivasarao Arulananda Babu
- Department of Chemical Sciences, Indian Institute of Science Education and Research, Mohali, Knowledge City, Sector 81, SAS Nagar, Mohali, Manauli P.O., Punjab, 140306, India.
| | - Yashika Aggarwal
- Department of Chemical Sciences, Indian Institute of Science Education and Research, Mohali, Knowledge City, Sector 81, SAS Nagar, Mohali, Manauli P.O., Punjab, 140306, India.
| | - Pooja Patel
- Department of Chemical Sciences, Indian Institute of Science Education and Research, Mohali, Knowledge City, Sector 81, SAS Nagar, Mohali, Manauli P.O., Punjab, 140306, India.
| | - Radha Tomar
- Department of Chemical Sciences, Indian Institute of Science Education and Research, Mohali, Knowledge City, Sector 81, SAS Nagar, Mohali, Manauli P.O., Punjab, 140306, India.
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6
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Thesmar P, Coomar S, Prescimone A, Häussinger D, Gillingham D, Baudoin O. Divergent Synthesis of Bioactive Dithiodiketopiperazine Natural Products Based on a Double C(sp 3 )-H Activation Strategy. Chemistry 2020; 26:15298-15312. [PMID: 32852800 DOI: 10.1002/chem.202003683] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Revised: 08/26/2020] [Indexed: 12/28/2022]
Abstract
This article provides a detailed report of our efforts to synthesize the dithiodiketopiperazine (DTP) natural products (-)-epicoccin G and (-)-rostratin A using a double C(sp3 )-H activation strategy. The strategy's viability was first established on a model system lacking the C8/C8' alcohols. Then, an efficient stereoselective route including an organocatalytic epoxidation was secured to access a key bis-triflate substrate. This bis-triflate served as the functional handles for the key transformation of the synthesis: a double C(sp3 )-H activation. The successful double activation opened access to a common intermediate for both natural products in high overall yield and on a multigram scale. After several unsuccessful attempts, this intermediate was efficiently converted to (-)-epicoccin G and to the more challenging (-)-rostratin A via suitable oxidation/reduction and protecting group sequences, and via a final sulfuration that occurred in good yield and high diastereoselectivity. These efforts culminated in the synthesis of (-)-epicoccin G and (-)-rostratin A in high overall yields (19.6 % over 14 steps and 12.7 % over 17 steps, respectively), with the latter being obtained on a 500 mg scale. Toxicity assessments of these natural products and several analogues (including the newly synthesized epicoccin K) in the leukemia cell line K562 confirmed the importance of the disulfide bridge for activity and identified dianhydrorostratin A as a 20x more potent analogue.
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Affiliation(s)
- Pierre Thesmar
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
| | - Seemon Coomar
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
| | - Alessandro Prescimone
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
| | - Daniel Häussinger
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
| | - Dennis Gillingham
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
| | - Olivier Baudoin
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, 4056, Basel, Switzerland
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Thesmar P, Baudoin O. Efficient and Divergent Total Synthesis of (-)-Epicoccin G and (-)-Rostratin A Enabled by Double C(sp 3)-H Activation. J Am Chem Soc 2019; 141:15779-15783. [PMID: 31556609 DOI: 10.1021/jacs.9b09359] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Dithiodiketopiperazines are complex polycyclic natural products possessing a variety of interesting biological activities. Despite their interest, relatively few total syntheses have been completed. We herein report the enantioselective, scalable, and divergent total synthesis of two symmetrical pentacyclic dithiodiketopiperazines, (-)-epicoccin G and (-)-rostratin A. A common intermediate was synthesized on a multigram scale from inexpensive, commercially available starting materials using an enantioselective organocatalytic epoxidation and a double C(sp3)-H activation as key steps, with the latter allowing the efficient simultaneous construction of the two five-membered rings. In addition to the cis,cis-fused target (-)-epiccocin G, the more challenging (-)-rostratin A, possessing two trans ring junctions, was obtained for the first time on a 500 mg scale through the optimization of each step and validation on multigram quantities. Both natural products were synthesized with high overall yields (13-20%). This study should facilitate access to this fascinating and yet understudied family of biologically active natural products.
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Affiliation(s)
- Pierre Thesmar
- Department of Chemistry , University of Basel , St. Johanns-Ring 19 , CH-4056 Basel , Switzerland
| | - Olivier Baudoin
- Department of Chemistry , University of Basel , St. Johanns-Ring 19 , CH-4056 Basel , Switzerland
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8
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Soni V, Khake SM, Punji B. Nickel-Catalyzed C(sp2)–H/C(sp3)–H Oxidative Coupling of Indoles with Toluene Derivatives. ACS Catal 2017. [DOI: 10.1021/acscatal.7b01044] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Vineeta Soni
- Organometallic Synthesis
and Catalysis Group, Chemical Engineering Division, CSIR−National Chemical Laboratory (CSIR−NCL), Dr. Homi Bhabha Road, Pune 411 008, Maharashtra, India
| | - Shrikant M. Khake
- Organometallic Synthesis
and Catalysis Group, Chemical Engineering Division, CSIR−National Chemical Laboratory (CSIR−NCL), Dr. Homi Bhabha Road, Pune 411 008, Maharashtra, India
| | - Benudhar Punji
- Organometallic Synthesis
and Catalysis Group, Chemical Engineering Division, CSIR−National Chemical Laboratory (CSIR−NCL), Dr. Homi Bhabha Road, Pune 411 008, Maharashtra, India
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9
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Abstract
The catalytic activation and functionalization of unactivated C(sp3)-H bonds of alkyl groups has undergone intense development in recent years. In particular, a variety of directing groups as well as native functional groups have been employed in combination with palladium(II) catalysis in order to perform a variety of intermolecular, and to some extent intramolecular reactions. In parallel, inspired by precedents in C(sp2)-H arylation, our group and others have developed a different approach, which is the focus of this Account. This strategy relies on the use of oxidative addition of a carbon-leaving group bond to palladium(0) to induce intramolecular C(sp3)-H activation and the subsequent formation of a C(sp2)-C(sp3) or C(sp3)-C(sp3) bond. Since our first publication in 2003, the construction of olefins and, more interestingly, of an array of valuable monocyclic and polycyclic systems has been reported according to this principle. (Hetero)aryl bromides were initially employed as reactants, but the scope was later expanded to include (hetero)aryl chlorides and triflates, alkenyl bromides, carbamoyl chlorides and α-chloroamides. Mechanistic studies enabled a better understanding of the C-H activation step, which was proposed to occur through ambiphilic metal-ligand activation-6 (AMLA-6), also known as concerted metalation deprotonation (CMD), and a better rationalization of the observed selectivity patterns. Moreover, the wealth of accumulated experimental data indicate that the number of atoms separating the C-H bond from Pd and the type of C-H bond are the main factors controlling the site-selectivity of the C-H bond cleavage. Recent efforts have been devoted to the development of enantioselective reactions. To this purpose, two different strategies have been employed: a chiral ancillary ligand in combination with an achiral base, and a chiral base in combination with an achiral ligand, and allowed for the achievement of high enantioselectivities in the construction of both tri- and tetrasubstituted stereocenters. On the other hand, the current C-H activation-based ring-forming method was applied to the synthesis of pharmacologically active substances and agrochemicals, as well as complex natural products such as the aeruginosins, thereby demonstrating its great potential for step-economical organic synthesis.
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Affiliation(s)
- Olivier Baudoin
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, CH-4056 Basel, Switzerland
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10
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Tsukano C, Suetsugu S, Muto N, Takemoto Y. Synthesis of Tetrahydrobiphenylene <i>via</i> Pd(0)-Catalyzed C(<i>sp</i><sup>2</sup>)–H Functionalization. Chem Pharm Bull (Tokyo) 2017; 65:1167-1174. [DOI: 10.1248/cpb.c17-00737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Chihiro Tsukano
- Graduate School of Pharmaceutical Sciences, Kyoto University
| | | | - Nobusuke Muto
- Graduate School of Pharmaceutical Sciences, Kyoto University
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11
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Tsukano C. Palladium(0)-Catalyzed Benzylic C( sp3)–H Functionalization for the Concise Synthesis of Heterocycles and Its Applications. Chem Pharm Bull (Tokyo) 2017; 65:409-425. [DOI: 10.1248/cpb.c16-00969] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Chihiro Tsukano
- Graduate School of Pharmaceutical Sciences, Kyoto University
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12
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He J, Wasa M, Chan KSL, Shao Q, Yu JQ. Palladium-Catalyzed Transformations of Alkyl C-H Bonds. Chem Rev 2016; 117:8754-8786. [PMID: 28697604 DOI: 10.1021/acs.chemrev.6b00622] [Citation(s) in RCA: 1492] [Impact Index Per Article: 165.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
This Review summarizes the advancements in Pd-catalyzed C(sp3)-H activation via various redox manifolds, including Pd(0)/Pd(II), Pd(II)/Pd(IV), and Pd(II)/Pd(0). While few examples have been reported in the activation of alkane C-H bonds, many C(sp3)-H activation/C-C and C-heteroatom bond forming reactions have been developed by the use of directing group strategies to control regioselectivity and build structural patterns for synthetic chemistry. A number of mono- and bidentate ligands have also proven to be effective for accelerating C(sp3)-H activation directed by weakly coordinating auxiliaries, which provides great opportunities to control reactivity and selectivity (including enantioselectivity) in Pd-catalyzed C-H functionalization reactions.
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Affiliation(s)
- Jian He
- Department of Chemistry, The Scripps Research Institute , 10550 N. Torrey Pines Road, La Jolla, California 92037, United States
| | - Masayuki Wasa
- Department of Chemistry, The Scripps Research Institute , 10550 N. Torrey Pines Road, La Jolla, California 92037, United States
| | - Kelvin S L Chan
- Department of Chemistry, The Scripps Research Institute , 10550 N. Torrey Pines Road, La Jolla, California 92037, United States
| | - Qian Shao
- Department of Chemistry, The Scripps Research Institute , 10550 N. Torrey Pines Road, La Jolla, California 92037, United States
| | - Jin-Quan Yu
- Department of Chemistry, The Scripps Research Institute , 10550 N. Torrey Pines Road, La Jolla, California 92037, United States
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Synthesis, Structure and Reactivity of Cyclometalated Nickel(II) Complexes: A Review and Perspective. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES INDIA SECTION A-PHYSICAL SCIENCES 2016. [DOI: 10.1007/s40010-016-0289-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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